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| #include <algorithm> |
| #include <iostream> |
| #include <limits> |
| #include <math.h> |
| #include <stdexcept> |
| #include <pybind11/pybind11.h> |
| #include <pybind11/numpy.h> |
| #include <random> |
|
|
| namespace py = pybind11; |
| using namespace std; |
|
|
| const int32_t LONG_SENTENCE_LEN = 512; |
|
|
|
|
| void build_blending_indices(py::array_t<uint8_t>& dataset_index, |
| py::array_t<int64_t>& dataset_sample_index, |
| const py::array_t<double>& weights, |
| const int32_t num_datasets, |
| const int64_t size, const bool verbose) { |
| |
| |
|
|
| if (verbose) { |
| std::cout << "> building indices for blendable datasets ..." << std::endl; |
| } |
|
|
| |
| auto dataset_index_ptr = dataset_index.mutable_unchecked<1>(); |
| auto dataset_sample_index_ptr = dataset_sample_index.mutable_unchecked<1>(); |
| auto weights_ptr = weights.unchecked<1>(); |
|
|
| |
| int64_t current_samples[num_datasets]; |
| for(int64_t i = 0; i < num_datasets; ++i) { |
| current_samples[i] = 0; |
| } |
|
|
| |
| for(int64_t sample_idx = 0; sample_idx < size; ++sample_idx) { |
|
|
| |
| auto sample_idx_double = std::max(static_cast<double>(sample_idx), 1.0); |
| int64_t max_error_index = 0; |
| double max_error = weights_ptr[0] * sample_idx_double - |
| static_cast<double>(current_samples[0]); |
| for (int64_t dataset_idx = 1; dataset_idx < num_datasets; ++dataset_idx) { |
| double error = weights_ptr[dataset_idx] * sample_idx_double - |
| static_cast<double>(current_samples[dataset_idx]); |
| if (error > max_error) { |
| max_error = error; |
| max_error_index = dataset_idx; |
| } |
| } |
|
|
| |
| dataset_index_ptr[sample_idx] = static_cast<uint8_t>(max_error_index); |
| dataset_sample_index_ptr[sample_idx] = current_samples[max_error_index]; |
|
|
| |
| current_samples[max_error_index] += 1; |
| |
| } |
|
|
| |
| if (verbose) { |
| std::cout << " > sample ratios:" << std::endl; |
| for (int64_t dataset_idx = 0; dataset_idx < num_datasets; ++dataset_idx) { |
| auto ratio = static_cast<double>(current_samples[dataset_idx]) / |
| static_cast<double>(size); |
| std::cout << " dataset " << dataset_idx << ", input: " << |
| weights_ptr[dataset_idx] << ", achieved: " << ratio << std::endl; |
| } |
| } |
|
|
| } |
|
|
|
|
| py::array build_sample_idx(const py::array_t<int32_t>& sizes_, |
| const py::array_t<int32_t>& doc_idx_, |
| const int32_t seq_length, |
| const int32_t num_epochs, |
| const int64_t tokens_per_epoch, |
| const bool drop_last = true, |
| const int add_extra_token = 1) { |
| |
| |
| |
| |
| |
|
|
| |
| assert(seq_length > 1); |
| assert(num_epochs > 0); |
| assert(tokens_per_epoch > 1); |
|
|
| |
| auto sizes = sizes_.unchecked<1>(); |
| auto doc_idx = doc_idx_.unchecked<1>(); |
|
|
| |
| int64_t num_samples = 0; |
| if (drop_last == false) { |
| num_samples = ceil(float(num_epochs * tokens_per_epoch - add_extra_token) / seq_length); |
| } else { |
| num_samples = (num_epochs * tokens_per_epoch - add_extra_token) / seq_length; |
| } |
| int32_t* sample_idx = new int32_t[2*(num_samples+1)]; |
|
|
| cout << " using:" << endl << std::flush; |
| cout << " number of documents: " << |
| doc_idx_.shape(0) / num_epochs << endl << std::flush; |
| cout << " number of epochs: " << num_epochs << |
| endl << std::flush; |
| cout << " sequence length: " << seq_length << |
| endl << std::flush; |
| cout << " total number of samples: " << num_samples << |
| endl << std::flush; |
|
|
| |
| int64_t sample_index = 0; |
| |
| int64_t doc_idx_index = 0; |
| |
| int32_t doc_offset = 0; |
| |
| sample_idx[2 * sample_index] = doc_idx_index; |
| sample_idx[2 * sample_index + 1] = doc_offset; |
| ++sample_index; |
|
|
| while (sample_index <= num_samples) { |
| |
| int32_t remaining_seq_length = seq_length + add_extra_token; |
| while (remaining_seq_length != 0) { |
| |
| auto doc_id = doc_idx[doc_idx_index]; |
| auto doc_length = sizes[doc_id] - doc_offset; |
| |
| remaining_seq_length -= doc_length; |
| |
| |
| |
| |
| if (remaining_seq_length <= 0) { |
| doc_offset += (remaining_seq_length + doc_length - add_extra_token); |
| remaining_seq_length = 0; |
| } else { |
| |
| if (doc_idx_index == (doc_idx_.shape(0) - 1)) { |
| assert(sample_index == num_samples); |
| doc_offset = sizes[doc_idx[doc_idx_index]] - add_extra_token; |
| break; |
| } |
| ++doc_idx_index; |
| doc_offset = 0; |
| } |
| } |
| |
| sample_idx[2 * sample_index] = doc_idx_index; |
| sample_idx[2 * sample_index + 1] = doc_offset; |
| ++sample_index; |
| } |
|
|
| |
| py::capsule free_when_done(sample_idx, [](void *mem_) { |
| int32_t *mem = reinterpret_cast<int32_t*>(mem_); |
| delete[] mem; |
| }); |
|
|
| |
| const auto byte_size = sizeof(int32_t); |
| return py::array(std::vector<int64_t>{num_samples+1, 2}, |
| {2*byte_size, byte_size}, |
| sample_idx, |
| free_when_done); |
| |
| } |
|
|
|
|
| inline int32_t get_target_sample_len(const int32_t short_seq_ratio, |
| const int32_t max_length, |
| std::mt19937& rand32_gen) { |
| |
| if (short_seq_ratio == 0) { |
| return max_length; |
| } |
| const auto random_number = rand32_gen(); |
| if ((random_number % short_seq_ratio) == 0) { |
| return 2 + random_number % (max_length - 1); |
| } |
| return max_length; |
| } |
|
|
|
|
| template<typename DocIdx> |
| py::array build_mapping_impl(const py::array_t<int64_t>& docs_, |
| const py::array_t<int32_t>& sizes_, |
| const int32_t num_epochs, |
| const uint64_t max_num_samples, |
| const int32_t max_seq_length, |
| const double short_seq_prob, |
| const int32_t seed, |
| const bool verbose, |
| const int32_t min_num_sent) { |
| |
| |
| |
| |
|
|
| |
| assert(num_epochs > 0); |
| assert(max_seq_length > 1); |
| assert(short_seq_prob >= 0.0); |
| assert(short_seq_prob <= 1.0); |
| assert(seed > 0); |
|
|
| |
| auto docs = docs_.unchecked<1>(); |
| auto sizes = sizes_.unchecked<1>(); |
|
|
| |
| int32_t short_seq_ratio = 0; |
| if (short_seq_prob > 0) { |
| short_seq_ratio = static_cast<int32_t>(round(1.0 / short_seq_prob)); |
| } |
|
|
| if (verbose) { |
| const auto sent_start_index = docs[0]; |
| const auto sent_end_index = docs[docs_.shape(0) - 1]; |
| const auto num_sentences = sent_end_index - sent_start_index; |
| cout << " using:" << endl << std::flush; |
| cout << " number of documents: " << docs_.shape(0) - 1 << |
| endl << std::flush; |
| cout << " sentences range: [" << sent_start_index << |
| ", " << sent_end_index << ")" << endl << std::flush; |
| cout << " total number of sentences: " << num_sentences << |
| endl << std::flush; |
| cout << " number of epochs: " << num_epochs << |
| endl << std::flush; |
| cout << " maximum number of samples: " << max_num_samples << |
| endl << std::flush; |
| cout << " maximum sequence length: " << max_seq_length << |
| endl << std::flush; |
| cout << " short sequence probability: " << short_seq_prob << |
| endl << std::flush; |
| cout << " short sequence ration (1/prob): " << short_seq_ratio << |
| endl << std::flush; |
| cout << " seed: " << seed << endl << |
| std::flush; |
| } |
|
|
| |
| int64_t num_samples = -1; |
| DocIdx* maps = NULL; |
|
|
| |
| |
| bool second = false; |
| for (int32_t iteration=0; iteration<2; ++iteration) { |
|
|
| |
| std::mt19937 rand32_gen(seed); |
|
|
| |
| second = (iteration == 1); |
|
|
| |
| uint64_t empty_docs = 0; |
| uint64_t one_sent_docs = 0; |
| uint64_t long_sent_docs = 0; |
|
|
| |
| uint64_t map_index = 0; |
|
|
| |
| for (int32_t epoch=0; epoch<num_epochs; ++epoch) { |
| if (map_index >= max_num_samples) { |
| if (verbose && (!second)) { |
| cout << " reached " << max_num_samples << " samples after " |
| << epoch << " epochs ..." << endl << std::flush; |
| } |
| break; |
| } |
| |
| for (int32_t doc=0; doc<(docs.shape(0) - 1); ++doc) { |
|
|
| |
| const auto sent_index_first = docs[doc]; |
| const auto sent_index_last = docs[doc + 1]; |
|
|
| |
| |
| auto prev_start_index = sent_index_first; |
|
|
| |
| auto num_remain_sent = sent_index_last - sent_index_first; |
|
|
| |
| if ((epoch == 0) && (!second)) { |
| if (num_remain_sent == 0) { |
| ++empty_docs; |
| } |
| if (num_remain_sent == 1) { |
| ++one_sent_docs; |
| } |
| } |
|
|
| |
| bool contains_long_sentence = false; |
| if (num_remain_sent > 1) { |
| for (auto sent_index=sent_index_first; |
| sent_index < sent_index_last; ++sent_index) { |
| if (sizes[sent_index] > LONG_SENTENCE_LEN){ |
| if ((epoch == 0) && (!second)) { |
| ++long_sent_docs; |
| } |
| contains_long_sentence = true; |
| break; |
| } |
| } |
| } |
|
|
| |
| if ((num_remain_sent >= min_num_sent) && (!contains_long_sentence)) { |
|
|
| |
| auto seq_len = int32_t{0}; |
| auto num_sent = int32_t{0}; |
| auto target_seq_len = get_target_sample_len(short_seq_ratio, |
| max_seq_length, |
| rand32_gen); |
|
|
| |
| for (auto sent_index=sent_index_first; |
| sent_index < sent_index_last; ++sent_index) { |
|
|
| |
| seq_len += sizes[sent_index]; |
| ++num_sent; |
| --num_remain_sent; |
|
|
| |
| |
| |
| |
| if (((seq_len >= target_seq_len) && |
| (num_remain_sent > 1) && |
| (num_sent >= min_num_sent) ) || (num_remain_sent == 0)) { |
|
|
| |
| if ((3 * map_index + 2) > |
| std::numeric_limits<int64_t>::max()) { |
| cout << "number of samples exceeded maximum " |
| << "allowed by type int64: " |
| << std::numeric_limits<int64_t>::max() |
| << endl; |
| throw std::overflow_error("Number of samples"); |
| } |
|
|
| |
| if (second) { |
| const auto map_index_0 = 3 * map_index; |
| maps[map_index_0] = static_cast<DocIdx>(prev_start_index); |
| maps[map_index_0 + 1] = static_cast<DocIdx>(sent_index + 1); |
| maps[map_index_0 + 2] = static_cast<DocIdx>(target_seq_len); |
| } |
|
|
| |
| ++map_index; |
| prev_start_index = sent_index + 1; |
| target_seq_len = get_target_sample_len(short_seq_ratio, |
| max_seq_length, |
| rand32_gen); |
| seq_len = 0; |
| num_sent = 0; |
| } |
|
|
| } |
| } |
| } |
| } |
|
|
| if (!second) { |
| if (verbose) { |
| cout << " number of empty documents: " << empty_docs << |
| endl << std::flush; |
| cout << " number of documents with one sentence: " << |
| one_sent_docs << endl << std::flush; |
| cout << " number of documents with long sentences: " << |
| long_sent_docs << endl << std::flush; |
| cout << " will create mapping for " << map_index << |
| " samples" << endl << std::flush; |
| } |
| assert(maps == NULL); |
| assert(num_samples < 0); |
| maps = new DocIdx[3*map_index]; |
| num_samples = static_cast<int64_t>(map_index); |
| } |
|
|
| } |
|
|
| |
| |
| |
| std::mt19937_64 rand64_gen(seed + 1); |
| for (auto i=(num_samples - 1); i > 0; --i) { |
| const auto j = static_cast<int64_t>(rand64_gen() % (i + 1)); |
| const auto i0 = 3 * i; |
| const auto j0 = 3 * j; |
| |
| swap(maps[i0], maps[j0]); |
| swap(maps[i0 + 1], maps[j0 + 1]); |
| swap(maps[i0 + 2], maps[j0 + 2]); |
| } |
|
|
| |
| py::capsule free_when_done(maps, [](void *mem_) { |
| DocIdx *mem = reinterpret_cast<DocIdx*>(mem_); |
| delete[] mem; |
| }); |
|
|
| |
| const auto byte_size = sizeof(DocIdx); |
| return py::array(std::vector<int64_t>{num_samples, 3}, |
| {3*byte_size, byte_size}, |
| maps, |
| free_when_done); |
|
|
| } |
|
|
|
|
| py::array build_mapping(const py::array_t<int64_t>& docs_, |
| const py::array_t<int>& sizes_, |
| const int num_epochs, |
| const uint64_t max_num_samples, |
| const int max_seq_length, |
| const double short_seq_prob, |
| const int seed, |
| const bool verbose, |
| const int32_t min_num_sent) { |
|
|
| if (sizes_.size() > std::numeric_limits<uint32_t>::max()) { |
| if (verbose) { |
| cout << " using uint64 for data mapping..." << endl << std::flush; |
| } |
| return build_mapping_impl<uint64_t>(docs_, sizes_, num_epochs, |
| max_num_samples, max_seq_length, |
| short_seq_prob, seed, verbose, |
| min_num_sent); |
| } else { |
| if (verbose) { |
| cout << " using uint32 for data mapping..." << endl << std::flush; |
| } |
| return build_mapping_impl<uint32_t>(docs_, sizes_, num_epochs, |
| max_num_samples, max_seq_length, |
| short_seq_prob, seed, verbose, |
| min_num_sent); |
| } |
| } |
|
|
| template<typename DocIdx> |
| py::array build_blocks_mapping_impl(const py::array_t<int64_t>& docs_, |
| const py::array_t<int32_t>& sizes_, |
| const py::array_t<int32_t>& titles_sizes_, |
| const int32_t num_epochs, |
| const uint64_t max_num_samples, |
| const int32_t max_seq_length, |
| const int32_t seed, |
| const bool verbose, |
| const bool use_one_sent_blocks) { |
| |
| |
| |
| |
|
|
| |
| assert(num_epochs > 0); |
| assert(max_seq_length > 1); |
| assert(seed > 0); |
|
|
| |
| auto docs = docs_.unchecked<1>(); |
| auto sizes = sizes_.unchecked<1>(); |
| auto titles_sizes = titles_sizes_.unchecked<1>(); |
|
|
| if (verbose) { |
| const auto sent_start_index = docs[0]; |
| const auto sent_end_index = docs[docs_.shape(0) - 1]; |
| const auto num_sentences = sent_end_index - sent_start_index; |
| cout << " using:" << endl << std::flush; |
| cout << " number of documents: " << docs_.shape(0) - 1 << |
| endl << std::flush; |
| cout << " sentences range: [" << sent_start_index << |
| ", " << sent_end_index << ")" << endl << std::flush; |
| cout << " total number of sentences: " << num_sentences << |
| endl << std::flush; |
| cout << " number of epochs: " << num_epochs << |
| endl << std::flush; |
| cout << " maximum number of samples: " << max_num_samples << |
| endl << std::flush; |
| cout << " maximum sequence length: " << max_seq_length << |
| endl << std::flush; |
| cout << " seed: " << seed << endl << |
| std::flush; |
| } |
|
|
| |
| int64_t num_samples = -1; |
| DocIdx* maps = NULL; |
|
|
| |
| int min_num_sent = 2; |
| if (use_one_sent_blocks) { |
| min_num_sent = 1; |
| } |
|
|
| |
| |
| bool second = false; |
| for (int32_t iteration=0; iteration<2; ++iteration) { |
|
|
| |
| second = (iteration == 1); |
|
|
| |
| uint64_t map_index = 0; |
|
|
| uint64_t empty_docs = 0; |
| uint64_t one_sent_docs = 0; |
| uint64_t long_sent_docs = 0; |
| |
| for (int32_t epoch=0; epoch<num_epochs; ++epoch) { |
| |
| int32_t block_id = 0; |
|
|
| if (map_index >= max_num_samples) { |
| if (verbose && (!second)) { |
| cout << " reached " << max_num_samples << " samples after " |
| << epoch << " epochs ..." << endl << std::flush; |
| } |
| break; |
| } |
| |
| for (int32_t doc=0; doc<(docs.shape(0) - 1); ++doc) { |
|
|
| |
| const auto sent_index_first = docs[doc]; |
| const auto sent_index_last = docs[doc + 1]; |
| const auto target_seq_len = max_seq_length - titles_sizes[doc]; |
|
|
| |
| |
| auto prev_start_index = sent_index_first; |
|
|
| |
| auto num_remain_sent = sent_index_last - sent_index_first; |
|
|
| |
| if ((epoch == 0) && (!second)) { |
| if (num_remain_sent == 0) { |
| ++empty_docs; |
| } |
| if (num_remain_sent == 1) { |
| ++one_sent_docs; |
| } |
| } |
| |
| bool contains_long_sentence = false; |
| if (num_remain_sent >= min_num_sent) { |
| for (auto sent_index=sent_index_first; |
| sent_index < sent_index_last; ++sent_index) { |
| if (sizes[sent_index] > LONG_SENTENCE_LEN){ |
| if ((epoch == 0) && (!second)) { |
| ++long_sent_docs; |
| } |
| contains_long_sentence = true; |
| break; |
| } |
| } |
| } |
| |
| if ((num_remain_sent >= min_num_sent) && (!contains_long_sentence)) { |
|
|
| |
| auto seq_len = int32_t{0}; |
| auto num_sent = int32_t{0}; |
|
|
| |
| for (auto sent_index=sent_index_first; |
| sent_index < sent_index_last; ++sent_index) { |
|
|
| |
| seq_len += sizes[sent_index]; |
| ++num_sent; |
| --num_remain_sent; |
|
|
| |
| |
| |
| |
| if (((seq_len >= target_seq_len) && |
| (num_remain_sent >= min_num_sent) && |
| (num_sent >= min_num_sent) ) || (num_remain_sent == 0)) { |
|
|
| |
| if (second) { |
| const auto map_index_0 = 4 * map_index; |
| |
| |
| |
|
|
| maps[map_index_0] = static_cast<DocIdx>(prev_start_index); |
| maps[map_index_0 + 1] = static_cast<DocIdx>(sent_index + 1); |
| maps[map_index_0 + 2] = static_cast<DocIdx>(doc); |
| maps[map_index_0 + 3] = static_cast<DocIdx>(block_id); |
| } |
|
|
| |
| ++map_index; |
| ++block_id; |
| prev_start_index = sent_index + 1; |
| seq_len = 0; |
| num_sent = 0; |
| } |
| } |
| } |
| } |
| } |
|
|
| if (!second) { |
| if (verbose) { |
| cout << " number of empty documents: " << empty_docs << |
| endl << std::flush; |
| cout << " number of documents with one sentence: " << |
| one_sent_docs << endl << std::flush; |
| cout << " number of documents with long sentences: " << |
| long_sent_docs << endl << std::flush; |
| cout << " will create mapping for " << map_index << |
| " samples" << endl << std::flush; |
| } |
| assert(maps == NULL); |
| assert(num_samples < 0); |
| maps = new DocIdx[4*map_index]; |
| num_samples = static_cast<int64_t>(map_index); |
| } |
|
|
| } |
|
|
| |
| |
| |
| std::mt19937_64 rand64_gen(seed + 1); |
| for (auto i=(num_samples - 1); i > 0; --i) { |
| const auto j = static_cast<int64_t>(rand64_gen() % (i + 1)); |
| const auto i0 = 4 * i; |
| const auto j0 = 4 * j; |
| |
| swap(maps[i0], maps[j0]); |
| swap(maps[i0 + 1], maps[j0 + 1]); |
| swap(maps[i0 + 2], maps[j0 + 2]); |
| swap(maps[i0 + 3], maps[j0 + 3]); |
| } |
|
|
| |
| py::capsule free_when_done(maps, [](void *mem_) { |
| DocIdx *mem = reinterpret_cast<DocIdx*>(mem_); |
| delete[] mem; |
| }); |
|
|
| |
| const auto byte_size = sizeof(DocIdx); |
| return py::array(std::vector<int64_t>{num_samples, 4}, |
| {4*byte_size, byte_size}, |
| maps, |
| free_when_done); |
|
|
| } |
|
|
| py::array build_blocks_mapping(const py::array_t<int64_t>& docs_, |
| const py::array_t<int>& sizes_, |
| const py::array_t<int>& titles_sizes_, |
| const int num_epochs, |
| const uint64_t max_num_samples, |
| const int max_seq_length, |
| const int seed, |
| const bool verbose, |
| const bool use_one_sent_blocks) { |
|
|
| if (sizes_.size() > std::numeric_limits<uint32_t>::max()) { |
| if (verbose) { |
| cout << " using uint64 for data mapping..." << endl << std::flush; |
| } |
| return build_blocks_mapping_impl<uint64_t>(docs_, sizes_, titles_sizes_, |
| num_epochs, max_num_samples, max_seq_length, seed, verbose, use_one_sent_blocks); |
| } else { |
| if (verbose) { |
| cout << " using uint32 for data mapping..." << endl << std::flush; |
| } |
| return build_blocks_mapping_impl<uint32_t>(docs_, sizes_, titles_sizes_, |
| num_epochs, max_num_samples, max_seq_length, seed, verbose, use_one_sent_blocks); |
| } |
| } |
|
|
| PYBIND11_MODULE(helpers, m) { |
| m.def("build_mapping", &build_mapping); |
| m.def("build_blocks_mapping", &build_blocks_mapping); |
| m.def("build_sample_idx", &build_sample_idx); |
| m.def("build_blending_indices", &build_blending_indices); |
| } |
|
|