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"narration": "Map Barcodes decodes sequencing reads into plate positions and guide identities. The console reports sample discovery, parser validation, read progress, output paths, and failures.",
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"speech_text": "Sequencing Input selects the fast cue folder and whether paired reads are combined or one read direction is processed alone.",
"phonemes": "sˈikwənsɪŋ ˈɪnpˌʊt səlˈɛkts ðə fˈæst kjˈu fˈOldəɹ ænd wˈɛðəɹ pˈɛɹd ɹˈidz ɑɹ kəmbˈInd ɔɹ wˈʌn ɹˈid dəɹˈɛkʃən ɪz pɹˈɑsˌɛst əlˈOn."
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"phonemes": "kənfˈɜɹm ðə nˈAmɪŋ pˈæTəɹn bəfˈɔɹ ɐ lˈɑɹʤ ɹˈʌn."
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"speech_text": "Barcode References points to lookup tables for guides, plate rows, and plate columns. Each table must pair a unique name with the expected sequence.",
"phonemes": "bˈɑɹkˌOd ɹˈɛfəɹənsᵻz pˈYnts tə lˈʊkˌʌp tˈAbᵊlz fɔɹ ɡˈIdz, plˈAt ɹˈOz, ænd plˈAt kˈɑləmz. ˈiʧ tˈAbᵊl mˈʌst pˈɛɹ ɐ jˌunˈik nˈAm wɪð ði ɪkspˈɛktᵻd sˈikwəns.",
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"phonemes": "bˈɑɹkˌOd ɹˈɛfəɹənsᵻz pˈYnts tə lˈʊkˌʌp tˈAbᵊlz fɔɹ ɡˈIdz, plˈAt ɹˈOz, ænd plˈAt kˈɑləmz."
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"text": "Read Parsing locates a known anchor, extracts the barcode window, and assigns named row, column, and guide groups. Derive this pattern from the library design and verify it on example reads.",
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"phonemes": "ɹˈid pˈɑɹsɪŋ lˈOkˌAts ɐ nˈOn ˈæŋkəɹ, ɪkstɹˈækts ðə bˈɑɹkˌOd wˈɪndO, ænd əsˈInz nˈAmd ɹˈO, kˈɑləm, ænd ɡˈId ɡɹˈups."
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"effective_speed": 0.88,
"sentences": [
{
"sentence": 1,
"speech_start": 55.355000000000004,
"speech_end": 59.35,
"audible_start": 55.455000000000005,
"audible_end": 59.17,
"duration": 3.995,
"gap_from_previous": null,
"trimmed_lead": 0.18,
"trimmed_tail": 0.45,
"text": "Runtime and Reliability sets chunk size, workers, and test mode.",
"speech_text": "Runtime and Reliability sets chunk size, workers, and test mode.",
"phonemes": "ɹˈʌntIm ænd ɹəlˌIəbˈɪləTi sˈɛts ʧˈʌŋk sˈIz, wˈɜɹkəɹz, ænd tˈɛst mˈOd."
},
{
"sentence": 2,
"speech_start": 59.470000000000006,
"speech_end": 64.785,
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"audible_end": 64.605,
"duration": 5.315,
"gap_from_previous": 0.4,
"trimmed_lead": 0.145,
"trimmed_tail": 0.415,
"text": "Start with a small test chunk; reduce the chunk or worker count when memory is constrained.",
"speech_text": "Start with a small test chunk; reduce the chunk or worker count when memory is constrained.",
"phonemes": "stˈɑɹt wɪð ɐ smˈɔl tˈɛst ʧˈʌŋk; ɹədˈus ðə ʧˈʌŋk ɔɹ wˈɜɹkəɹ kˈWnt wˌɛn mˈɛməɹi ɪz kənstɹˈAnd."
}
]
},
{
"scene": 7,
"speech_start": 65.30499999999999,
"speech_end": 74.695,
"scene_end": 75.21499999999999,
"duration": 9.909999999999997,
"text": "Run validates paths and references, discovers samples, counts reads, and starts chunked mapping. Stop requests an orderly interruption after the current safe point.",
"speech_text": "Run validates paths and references, discovers samples, counts reads, and starts chunked mapping. Stop requests an orderly interruption after the current safe point.",
"phonemes": "ɹˈʌn vˈælɪdˌAts pˈæðz ænd ɹˈɛfəɹənsᵻz, dəskˈʌvəɹz sˈæmpᵊlz, kˈWnts ɹˈidz, ænd stˈɑɹts ʧˈʌŋkt mˈæpɪŋ. stˈɑp ɹəkwˈɛsts ɐn ˈɔɹdəɹli ˌɪntəɹˈʌpʃən ˈæftəɹ ðə kˈɜɹənt sˈAf pˈYnt.",
"authored_hold_after": 0.7,
"hold_after": 0.52,
"base_speed": 0.88,
"speed_multiplier": 1.0,
"effective_speed": 0.88,
"sentences": [
{
"sentence": 1,
"speech_start": 65.30499999999999,
"speech_end": 70.73499999999999,
"audible_start": 65.40499999999999,
"audible_end": 70.55499999999999,
"duration": 5.43,
"gap_from_previous": null,
"trimmed_lead": 0.185,
"trimmed_tail": 0.46,
"text": "Run validates paths and references, discovers samples, counts reads, and starts chunked mapping.",
"speech_text": "Run validates paths and references, discovers samples, counts reads, and starts chunked mapping.",
"phonemes": "ɹˈʌn vˈælɪdˌAts pˈæðz ænd ɹˈɛfəɹənsᵻz, dəskˈʌvəɹz sˈæmpᵊlz, kˈWnts ɹˈidz, ænd stˈɑɹts ʧˈʌŋkt mˈæpɪŋ."
},
{
"sentence": 2,
"speech_start": 70.85499999999999,
"speech_end": 74.695,
"audible_start": 70.955,
"audible_end": 74.51499999999999,
"duration": 3.84,
"gap_from_previous": 0.4,
"trimmed_lead": 0.145,
"trimmed_tail": 0.415,
"text": "Stop requests an orderly interruption after the current safe point.",
"speech_text": "Stop requests an orderly interruption after the current safe point.",
"phonemes": "stˈɑp ɹəkwˈɛsts ɐn ˈɔɹdəɹli ˌɪntəɹˈʌpʃən ˈæftəɹ ðə kˈɜɹənt sˈAf pˈYnt."
}
]
},
{
"scene": 8,
"speech_start": 75.21499999999999,
"speech_end": 84.45499999999998,
"scene_end": 84.97499999999998,
"duration": 9.759999999999991,
"text": "Watch the active sample, batch count, matched fraction, and warnings in the progress display and console. Investigate poor mapping before accepting the complete run.",
"speech_text": "Watch the active sample, batch count, matched fraction, and warnings in the progress display and console. Investigate poor mapping before accepting the complete run.",
"phonemes": "wˈɑʧ ði ˈæktɪv sˈæmpᵊl, bˈæʧ kˈWnt, mˈæʧt fɹˈækʃən, ænd wˈɔɹnɪŋz ɪn ðə pɹˈɑɡɹəs dəsplˈA ænd kˈɑnsˌOl. ɪnvˈɛstəɡˌAt pˈʊɹ mˈæpɪŋ bəfˈɔɹ əksˈɛptɪŋ ðə kəmplˈit ɹˈʌn.",
"authored_hold_after": 0.7,
"hold_after": 0.52,
"base_speed": 0.88,
"speed_multiplier": 1.0,
"effective_speed": 0.88,
"sentences": [
{
"sentence": 1,
"speech_start": 75.21499999999999,
"speech_end": 80.785,
"audible_start": 75.31499999999998,
"audible_end": 80.60499999999999,
"duration": 5.57,
"gap_from_previous": null,
"trimmed_lead": 0.18,
"trimmed_tail": 0.45,
"text": "Watch the active sample, batch count, matched fraction, and warnings in the progress display and console.",
"speech_text": "Watch the active sample, batch count, matched fraction, and warnings in the progress display and console.",
"phonemes": "wˈɑʧ ði ˈæktɪv sˈæmpᵊl, bˈæʧ kˈWnt, mˈæʧt fɹˈækʃən, ænd wˈɔɹnɪŋz ɪn ðə pɹˈɑɡɹəs dəsplˈA ænd kˈɑnsˌOl."
},
{
"sentence": 2,
"speech_start": 80.90499999999999,
"speech_end": 84.45499999999998,
"audible_start": 81.005,
"audible_end": 84.27499999999999,
"duration": 3.55,
"gap_from_previous": 0.4,
"trimmed_lead": 0.17,
"trimmed_tail": 0.405,
"text": "Investigate poor mapping before accepting the complete run.",
"speech_text": "Investigate poor mapping before accepting the complete run.",
"phonemes": "ɪnvˈɛstəɡˌAt pˈʊɹ mˈæpɪŋ bəfˈɔɹ əksˈɛptɪŋ ðə kəmplˈit ɹˈʌn."
}
]
},
{
"scene": 9,
"speech_start": 84.97499999999998,
"speech_end": 95.22999999999998,
"scene_end": 95.74999999999997,
"duration": 10.774999999999991,
"text": "A successful run writes unique barcode combinations with row, column, guide, and count, plus a quality-control table, settings, and a manifest that make the mapping reproducible.",
"speech_text": "A successful run writes unique barcode combinations with row, column, guide, and count, plus a quality-control table, settings, and a manifest that make the mapping reproducible.",
"phonemes": "ɐ səksˈɛsfᵊl ɹˈʌn ɹˈIts jˌunˈik bˈɑɹkˌOd kˌɑmbənˈAʃənz wɪð ɹˈO, kˈɑləm, ɡˈId, ænd kˈWnt, plˈʌs ɐ kwˌɑləTikəntɹˈOl tˈAbᵊl, sˈɛTɪŋz, ænd ɐ mˈænəfˌɛst ðæt mˌAk ðə mˈæpɪŋ ɹˌipɹədˈusəbᵊl.",
"authored_hold_after": 0.7,
"hold_after": 0.52,
"base_speed": 0.88,
"speed_multiplier": 1.0,
"effective_speed": 0.88,
"sentences": [
{
"sentence": 1,
"speech_start": 84.97499999999998,
"speech_end": 95.22999999999998,
"audible_start": 85.07499999999997,
"audible_end": 95.04999999999998,
"duration": 10.255,
"gap_from_previous": null,
"trimmed_lead": 0.185,
"trimmed_tail": 0.435,
"text": "A successful run writes unique barcode combinations with row, column, guide, and count, plus a quality-control table, settings, and a manifest that make the mapping reproducible.",
"speech_text": "A successful run writes unique barcode combinations with row, column, guide, and count, plus a quality-control table, settings, and a manifest that make the mapping reproducible.",
"phonemes": "ɐ səksˈɛsfᵊl ɹˈʌn ɹˈIts jˌunˈik bˈɑɹkˌOd kˌɑmbənˈAʃənz wɪð ɹˈO, kˈɑləm, ɡˈId, ænd kˈWnt, plˈʌs ɐ kwˌɑləTikəntɹˈOl tˈAbᵊl, sˈɛTɪŋz, ænd ɐ mˈænəfˌɛst ðæt mˌAk ðə mˈæpɪŋ ɹˌipɹədˈusəbᵊl."
}
]
}
]
}