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from __future__ import annotations |
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from collections.abc import Callable |
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from typing import TYPE_CHECKING |
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from monai.config import IgniteInfo |
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from monai.engines.utils import IterationEvents, engine_apply_transform |
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from monai.utils import min_version, optional_import |
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Events, _ = optional_import("ignite.engine", IgniteInfo.OPT_IMPORT_VERSION, min_version, "Events") |
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if TYPE_CHECKING: |
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from ignite.engine import Engine |
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else: |
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Engine, _ = optional_import("ignite.engine", IgniteInfo.OPT_IMPORT_VERSION, min_version, "Engine") |
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class PostProcessing: |
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""" |
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Ignite handler to execute additional post processing after the post processing in engines. |
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So users can insert other handlers between engine postprocessing and this post processing handler. |
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If using components from `monai.transforms` as the `transform`, recommend to decollate `engine.state.batch` |
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and `engine.state.batch` in the engine(set `decollate=True`) or in the `DecollateBatch` handler first. |
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""" |
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def __init__(self, transform: Callable, event: str = "MODEL_COMPLETED") -> None: |
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""" |
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Args: |
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transform: callable function to execute on the `engine.state.batch` and `engine.state.output`. |
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can also be composed transforms. |
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event: expected EVENT to attach the handler, should be "MODEL_COMPLETED" or "ITERATION_COMPLETED". |
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default to "MODEL_COMPLETED". |
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""" |
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self.transform = transform |
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event = event.upper() |
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if event not in ("MODEL_COMPLETED", "ITERATION_COMPLETED"): |
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raise ValueError("event should be `MODEL_COMPLETED` or `ITERATION_COMPLETED`.") |
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self.event = event |
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def attach(self, engine: Engine) -> None: |
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""" |
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Args: |
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engine: Ignite Engine, it can be a trainer, validator or evaluator. |
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""" |
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if self.event == "MODEL_COMPLETED": |
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engine.add_event_handler(IterationEvents.MODEL_COMPLETED, self) |
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else: |
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engine.add_event_handler(Events.ITERATION_COMPLETED, self) |
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def __call__(self, engine: Engine) -> None: |
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""" |
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Args: |
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engine: Ignite Engine, it can be a trainer, validator or evaluator. |
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""" |
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if not isinstance(engine.state.batch, list) or not isinstance(engine.state.output, list): |
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engine.state.batch, engine.state.output = engine_apply_transform( |
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batch=engine.state.batch, output=engine.state.output, transform=self.transform |
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) |
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else: |
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for i, (b, o) in enumerate(zip(engine.state.batch, engine.state.output)): |
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engine.state.batch[i], engine.state.output[i] = engine_apply_transform(b, o, self.transform) |
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