Auto-upload batch data to clear storage

.gitattributes

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data/__notebook__.ipynb

@@ -61342,6 +61342,1735 @@
      },
      "metadata": {},
      "output_type": "display_data"
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "-> Upload thành công!\n",
+      "-> Đang xóa dữ liệu local để giải phóng bộ nhớ...\n"
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "-> Đã làm trống thư mục. Dung lượng hiện tại: 0.00 GB\n",
+      "--------------------------------------------------\n",
+      "[7458/10000] (15.63GB) Downloading: TCGA-BRCA.568de015-d66d-4731-83ce-8f8439ffa6b2.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7459/10000] (0.01GB) Downloading: dcade5fa-cc2d-4251-984b-c426607a0598.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7460/10000] (0.01GB) Downloading: nationwidechildrens.org_biospecimen.TCGA-A8-A094.xml (0.10 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7461/10000] (0.01GB) Downloading: TCGA-B6-A2IU-01A-21-A24A-20_RPPA_data.tsv (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7462/10000] (0.01GB) Downloading: TCGA-B6-A2IU-01A-03-TSC.BB626BA9-ECDE-4EFF-8854-DA1C2A9638EA.svs (138.19 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7463/10000] (0.14GB) Downloading: TCGA-BRCA.deedcd96-88fd-445e-bc6c-085c79a431ab.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7464/10000] (0.14GB) Downloading: TCGA-BRCA.48becee8-1c71-4320-b0e8-72e345797daf.ascat2.allelic_specific.seg.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7465/10000] (0.14GB) Downloading: CELLA_p_TCGA_177_179_Esph_SNP_N_GenomeWideSNP_6_G08_871058.grch38.seg.v2.txt (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7466/10000] (0.14GB) Downloading: TCGA-A8-A094-01A-01-TS1.f4ebf386-f3b5-4bd4-8cb5-64c14fe6bc94.svs (248.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7467/10000] (0.39GB) Downloading: 8df36808-c299-480b-8733-d9949d90b3a6.wxs.aliquot_ensemble_masked.maf.gz (0.07 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7468/10000] (0.39GB) Downloading: a4397eb3-c9ce-4af7-96cf-75a7bb4bcbbc.mirbase21.isoforms.quantification.txt (0.34 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7469/10000] (0.39GB) Downloading: TCGA-BRCA.48becee8-1c71-4320-b0e8-72e345797daf.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7470/10000] (0.39GB) Downloading: 56ddfd03-188f-4d9a-9070-b0c0f1c64376.wxs.aliquot_ensemble_masked.maf.gz (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7471/10000] (0.39GB) Downloading: GHOUL_p_TCGASNP_b85and51R_N_GenomeWideSNP_6_F10_735296.grch38.seg.v2.txt (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7472/10000] (0.39GB) Downloading: TCGA-B6-A2IU-01Z-00-DX1.3C7DF701-4ED9-4989-AA63-A6B7B105F6EE.svs (1974.07 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7473/10000] (2.32GB) Downloading: 254e6e3e-e30e-46c3-890a-18df11361eac.methylation_array.sesame.level3betas.txt (12.57 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7474/10000] (2.33GB) Downloading: 2f05f114-9769-48e4-978c-6bfe1f2f372f.rna_seq.augmented_star_gene_counts.tsv (4.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7475/10000] (2.33GB) Downloading: TCGA-B6-A2IU.EE769039-220E-4158-8999-09F17AFB4C46.PDF (0.11 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7476/10000] (2.33GB) Downloading: cd23ba96-cc18-428d-ae3d-67a7a2dd3c91.rna_seq.augmented_star_gene_counts.tsv (4.06 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7477/10000] (2.34GB) Downloading: a5c6d192-6fb0-40fd-b94a-1dfadedc88b0.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7478/10000] (2.34GB) Downloading: JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_F03_747980.grch38.seg.v2.txt (0.04 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7479/10000] (2.34GB) Downloading: TCGA-C8-A12N-01A-11D-A894-36.WholeGenome.RP-1657.cr.igv.reheader.seg.txt (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7480/10000] (2.34GB) Downloading: TCGA-BRCA.48becee8-1c71-4320-b0e8-72e345797daf.absolute_liftover.gene_level_copy_number.v36.tsv (3.27 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7481/10000] (2.34GB) Downloading: 6330c24f-6984-44d4-84ff-5e4c34c806bc.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7482/10000] (2.34GB) Downloading: a5b2eb51-c105-4612-9391-cfc9ff39b3b2.methylation_array.sesame.level3betas.txt (0.74 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7483/10000] (2.34GB) Downloading: TCGA-AR-A1AQ-01A-01-TSA.113b2018-7bb9-44bd-aa80-63eaf688b555.svs (312.41 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7484/10000] (2.65GB) Downloading: 6330c24f-6984-44d4-84ff-5e4c34c806bc.mirbase21.isoforms.quantification.txt (0.24 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7485/10000] (2.65GB) Downloading: fa68f395-fa89-44be-8ec8-a1b317b45644.wxs.aliquot_ensemble_masked.maf.gz (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7486/10000] (2.65GB) Downloading: a33dc85d-7696-40ed-902d-97d1300c8f31_noid_Red.idat (7.72 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7487/10000] (2.65GB) Downloading: nationwidechildrens.org_clinical.TCGA-C8-A12N.xml (0.06 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7488/10000] (2.65GB) Downloading: nationwidechildrens.org_biospecimen.TCGA-AR-A1AQ.xml (0.06 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7489/10000] (2.65GB) Downloading: a5c6d192-6fb0-40fd-b94a-1dfadedc88b0.mirbase21.isoforms.quantification.txt (0.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7490/10000] (2.66GB) Downloading: TCGA-AR-A1AQ-01Z-00-DX1.09D5D7FC-0FA8-4176-94B2-995F44D8ED4C.svs (786.51 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7491/10000] (3.42GB) Downloading: 4dabe64a-7fb8-4009-a696-d4eee0cead8b.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7492/10000] (3.42GB) Downloading: TCGA-C8-A12N-01Z-00-DX1.8E50110E-A6C0-496F-B44E-7190096C113E.svs (685.94 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7493/10000] (4.09GB) Downloading: a5b2eb51-c105-4612-9391-cfc9ff39b3b2_noid_Red.idat (0.69 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7494/10000] (4.09GB) Downloading: nationwidechildrens.org_ssf.TCGA-LL-A5YO.xml (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7495/10000] (4.09GB) Downloading: JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_F03_747980.nocnv_grch38.seg.v2.txt (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7496/10000] (4.09GB) Downloading: a6b7927f-f3c4-467b-bc91-3a6fe7f86fc4_noid_Red.idat (0.69 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7497/10000] (4.09GB) Downloading: COZEN_p_TCGAb56_SNP_2N_GenomeWideSNP_6_C01_667192.grch38.seg.v2.txt (0.04 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7498/10000] (4.09GB) Downloading: COZEN_p_TCGAb56_SNP_2N_GenomeWideSNP_6_H08_667182.nocnv_grch38.seg.v2.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7499/10000] (4.09GB) Downloading: TCGA-BRCA.51c263b0-32eb-49fe-b7ed-7de6b0a94c33.ascat3.allelic_specific.seg.txt (0.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7500/10000] (4.09GB) Downloading: 22c90647-bf63-49e1-972a-0ff9000b674b.rna_seq.augmented_star_gene_counts.tsv (4.04 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7501/10000] (4.10GB) Downloading: COPAL_p_TCGAb_337_338_339_NSP_GenomeWideSNP_6_F01_1373640.grch38.seg.v2.txt (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7502/10000] (4.10GB) Downloading: nationwidechildrens.org_clinical.TCGA-A7-A6VW.xml (0.08 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7503/10000] (4.10GB) Downloading: e90c1051-744f-46e5-bcec-f95d34f59e0a.rna_seq.augmented_star_gene_counts.tsv (4.04 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7504/10000] (4.10GB) Downloading: DRIPS_p_TCGA_295_296_297_N_GenomeWideSNP_6_H06_1343768.nocnv_grch38.seg.v2.txt (0.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7505/10000] (4.10GB) Downloading: TCGA-BRCA.8a5f6839-507d-4288-91e9-22badf54b089.absolute_liftover.gene_level_copy_number.v36.tsv (3.28 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7506/10000] (4.11GB) Downloading: nationwidechildrens.org_biospecimen.TCGA-E9-A1N9.xml (0.09 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7507/10000] (4.11GB) Downloading: TCGA-A7-A6VW-01A-02-TS2.4A09D2AC-A574-40F1-9247-2729EFD0EDAA.svs (224.60 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7508/10000] (4.33GB) Downloading: CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_E12_777596.nocnv_grch38.seg.v2.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7509/10000] (4.33GB) Downloading: DRIPS_p_TCGA_295_296_297_N_GenomeWideSNP_6_F04_1343806.grch38.seg.v2.txt (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7510/10000] (4.33GB) Downloading: a2faa0bd-d8a2-408b-b364-2e5201a21b58.wxs.aliquot_ensemble_masked.maf.gz (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7511/10000] (4.33GB) Downloading: TCGA-BRCA.8a5f6839-507d-4288-91e9-22badf54b089.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7512/10000] (4.33GB) Downloading: 8fcab2a8-6ac5-4236-a774-0239676de66d_noid_Grn.idat (7.72 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7513/10000] (4.34GB) Downloading: 786c731d-2ad4-4b24-ad77-29a85f94b953.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7514/10000] (4.34GB) Downloading: 42fcc484-0092-4f27-ac5d-61a907fd57c8.methylation_array.sesame.level3betas.txt (12.55 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7515/10000] (4.35GB) Downloading: TCGA-BRCA.5ae97b02-7893-4ef8-83aa-585b87983f37.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7516/10000] (4.35GB) Downloading: TCGA-BRCA.46a7082e-19e7-4f1a-806b-31c2db120c34.absolute_liftover.gene_level_copy_number.v36.tsv (3.27 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7517/10000] (4.35GB) Downloading: 9b413ca5-5a75-4ceb-9059-0f772af2fbe5.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7518/10000] (4.35GB) Downloading: TCGA-A8-A08A-01A-01-BS1.db510b27-0937-42da-b559-6d65271401f1.svs (335.22 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7519/10000] (4.68GB) Downloading: CUSKS_p_TCGAb47_SNP_1N_GenomeWideSNP_6_E03_628254.grch38.seg.v2.txt (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7520/10000] (4.68GB) Downloading: TCGA-BRCA.5ae97b02-7893-4ef8-83aa-585b87983f37.ascat3.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7521/10000] (4.69GB) Downloading: TCGA-E9-A1N9-01Z-00-DX1.982C83A6-0E06-47B3-A7C7-1773A2CD1771.svs (490.89 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7522/10000] (5.16GB) Downloading: f953c835-697b-4758-a98f-829b420fb373_noid_Grn.idat (0.69 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7523/10000] (5.17GB) Downloading: TCGA-E9-A1N9-11A-81-A43P-20_RPPA_data.tsv (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7524/10000] (5.17GB) Downloading: TCGA-BRCA.46a7082e-19e7-4f1a-806b-31c2db120c34.ascat3.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7525/10000] (5.17GB) Downloading: 86931155-2879-41e4-8fa2-1f24826d8768.rna_seq.augmented_star_gene_counts.tsv (4.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7526/10000] (5.17GB) Downloading: nationwidechildrens.org_ssf.TCGA-A8-A08A.xml (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7527/10000] (5.17GB) Downloading: f953c835-697b-4758-a98f-829b420fb373_noid_Red.idat (0.69 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7528/10000] (5.17GB) Downloading: 553e13f9-e00e-4b05-b934-c3837ad4d02d.rna_seq.augmented_star_gene_counts.tsv (4.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7529/10000] (5.18GB) Downloading: TCGA-E9-A1N9-11A-07-TSG.891564a7-f2bd-4994-9a09-13db48596a93.svs (75.51 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7530/10000] (5.25GB) Downloading: nationwidechildrens.org_clinical.TCGA-E9-A1N9.xml (0.07 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7531/10000] (5.25GB) Downloading: TCGA-BRCA.46a7082e-19e7-4f1a-806b-31c2db120c34.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7532/10000] (5.25GB) Downloading: 3cbdea8d-8a71-4fe6-b605-b196e3abe55f.mirbase21.isoforms.quantification.txt (0.37 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7533/10000] (5.25GB) Downloading: TCGA-BRCA.5ae97b02-7893-4ef8-83aa-585b87983f37.absolute_liftover.gene_level_copy_number.v36.tsv (3.27 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7534/10000] (5.26GB) Downloading: MOHEL_p_TCGA_271_274_275_N_GenomeWideSNP_6_C10_1320354.nocnv_grch38.seg.v2.txt (0.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7535/10000] (5.26GB) Downloading: HAULS_p_TCGAb47_SNP_2N_GenomeWideSNP_6_D02_628476.grch38.seg.v2.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7536/10000] (5.26GB) Downloading: TCGA-BRCA.f552a80d-3e4c-4c0b-b827-806305e48a35.absolute_liftover.gene_level_copy_number.v36.tsv (3.28 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7537/10000] (5.26GB) Downloading: TCGA-BRCA.ea568589-43f0-4539-acdf-c626aeb20446.ascat3.allelic_specific.seg.txt (0.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7538/10000] (5.26GB) Downloading: TCGA-BRCA.f552a80d-3e4c-4c0b-b827-806305e48a35.ascat2.allelic_specific.seg.txt (0.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7539/10000] (5.26GB) Downloading: TCGA-BRCA.f552a80d-3e4c-4c0b-b827-806305e48a35.ascat3.allelic_specific.seg.txt (0.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7540/10000] (5.26GB) Downloading: TCGA-BRCA.ea568589-43f0-4539-acdf-c626aeb20446.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7541/10000] (5.26GB) Downloading: c7e61a1c-fad6-4fc1-ba1a-49189d4fc0f1.rna_seq.augmented_star_gene_counts.tsv (4.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7542/10000] (5.27GB) Downloading: TCGA-BRCA.ea568589-43f0-4539-acdf-c626aeb20446.ascat3.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7543/10000] (5.27GB) Downloading: nationwidechildrens.org_clinical.TCGA-A8-A0A7.xml (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7544/10000] (5.27GB) Downloading: 21d7c6bf-7b0f-4a98-b04f-cf9d472d9332.mirbase21.isoforms.quantification.txt (0.28 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7545/10000] (5.27GB) Downloading: nationwidechildrens.org_ssf.TCGA-A8-A0A7.xml (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7546/10000] (5.27GB) Downloading: 0007e90d-3186-4967-905c-22aa24049d44_noid_Red.idat (0.69 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7547/10000] (5.27GB) Downloading: a75296ed-0a6a-45aa-9483-e550417976ce.methylation_array.sesame.level3betas.txt (12.49 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7548/10000] (5.28GB) Downloading: a75296ed-0a6a-45aa-9483-e550417976ce_noid_Grn.idat (7.72 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7549/10000] (5.29GB) Downloading: TCGA-A8-A0A7-01A-01-BS1.4a4d1511-7d0f-4482-bd6c-7a1ebbfe2ce6.svs (161.67 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7550/10000] (5.45GB) Downloading: TCGA-BRCA.ea568589-43f0-4539-acdf-c626aeb20446.absolute_liftover.gene_level_copy_number.v36.tsv (3.27 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7551/10000] (5.45GB) Downloading: TCGA-BRCA.ea568589-43f0-4539-acdf-c626aeb20446.ascat2.allelic_specific.seg.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7552/10000] (5.45GB) Downloading: TCGA-A8-A0A7-01A-11D-A88Z-36.WholeGenome.RP-1657.cr.igv.reheader.seg.txt (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7553/10000] (5.45GB) Downloading: HAULS_p_TCGAb47_SNP_2N_GenomeWideSNP_6_C11_628504.grch38.seg.v2.txt (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7554/10000] (5.45GB) Downloading: e1f1e3de-a466-4cdf-89d2-3f5c0e86a304.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7555/10000] (5.45GB) Downloading: TCGA-A8-A0A7-01A-21-A13A-20_RPPA_data.tsv (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7556/10000] (5.45GB) Downloading: a191b96c-cc06-4a58-990b-57ee27335d5c.rna_seq.augmented_star_gene_counts.tsv (4.04 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7557/10000] (5.46GB) Downloading: TCGA-BRCA.c5e3d0a9-e703-4c1c-92eb-3dcc093d14e2.absolute_liftover.gene_level_copy_number.v36.tsv (3.27 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7558/10000] (5.46GB) Downloading: nationwidechildrens.org_clinical.TCGA-EW-A1P0.xml (0.07 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7559/10000] (5.46GB) Downloading: 0007e90d-3186-4967-905c-22aa24049d44_noid_Grn.idat (0.69 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7560/10000] (5.46GB) Downloading: GOOFS_p_TCGA_b117_118_SNP_N_GenomeWideSNP_6_F11_778124.grch38.seg.v2.txt (0.04 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7561/10000] (5.46GB) Downloading: TCGA-A8-A0A7-01A-01-TS1.dfc11237-aff0-442f-8a39-ce81f0d4aeb1.svs (382.20 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7562/10000] (5.83GB) Downloading: edd93086-8a98-471b-904d-9ac725a9a386.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7563/10000] (5.83GB) Downloading: TCGA-A2-A1FZ.F93E326D-F4E0-4000-8A67-AA19C4D3637A.PDF (0.18 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7564/10000] (5.83GB) Downloading: TCGA-BRCA.6696111b-ca51-4c58-806d-2d5faa3a9456.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7565/10000] (5.84GB) Downloading: CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G05_777660.grch38.seg.v2.txt (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7566/10000] (5.84GB) Downloading: f846c0ad-9bbd-46a5-a678-fc3c05cdcc41.mirbase21.isoforms.quantification.txt (0.33 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7567/10000] (5.84GB) Downloading: TCGA-BRCA.2324a415-fc47-477f-8842-822a48b120a6.ascat3.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7568/10000] (5.84GB) Downloading: TCGA-A2-A1FZ-01A-11-A17I-20_RPPA_data.tsv (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7569/10000] (5.84GB) Downloading: d528ac3c-d7c2-45b4-b1f0-ca45e0b9cf86.wxs.aliquot_ensemble_masked.maf.gz (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7570/10000] (5.84GB) Downloading: 6cbd5498-f78e-499d-9428-df4577d4dcd2_noid_Red.idat (7.72 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7571/10000] (5.85GB) Downloading: GOOFS_p_TCGA_b117_118_SNP_N_GenomeWideSNP_6_D04_778116.grch38.seg.v2.txt (0.06 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7572/10000] (5.85GB) Downloading: TCGA-A2-A1FZ-01A-21D-A896-36.WholeGenome.RP-1657.cr.igv.reheader.seg.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7573/10000] (5.85GB) Downloading: TCGA-A8-A09Z-01Z-00-DX1.D56497BE-5099-4537-9600-60F3213F7BF5.svs (1526.67 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7574/10000] (7.34GB) Downloading: TCGA-BRCA.2324a415-fc47-477f-8842-822a48b120a6.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7575/10000] (7.34GB) Downloading: 5c66dcbd-024b-4a7b-b3aa-bbbaaf91ae78.rna_seq.augmented_star_gene_counts.tsv (4.04 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7576/10000] (7.35GB) Downloading: TCGA-AO-A1KR-01A-12D-A897-36.WholeGenome.RP-1657.cr.igv.reheader.seg.txt (0.13 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7577/10000] (7.35GB) Downloading: 07aa7c0a-ef47-495a-93be-b23a799d71d8.rna_seq.augmented_star_gene_counts.tsv (4.04 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7578/10000] (7.35GB) Downloading: CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_C05_777716.nocnv_grch38.seg.v2.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7579/10000] (7.35GB) Downloading: CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_C05_777716.grch38.seg.v2.txt (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7580/10000] (7.35GB) Downloading: TCGA-BRCA.0d7cde44-ec86-415a-8667-0ea894d1c344.ascat2.allelic_specific.seg.txt (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7581/10000] (7.35GB) Downloading: TCGA-BRCA.6696111b-ca51-4c58-806d-2d5faa3a9456.ascat3.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7582/10000] (7.35GB) Downloading: 9470299b-61e0-48d9-ad8d-28404cd6bfa1.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7583/10000] (7.35GB) Downloading: TCGA-BRCA.ce888acf-cb20-43f6-936b-be22ed0f817e.ascat3.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7584/10000] (7.36GB) Downloading: f846c0ad-9bbd-46a5-a678-fc3c05cdcc41.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7585/10000] (7.36GB) Downloading: TCGA-A8-A09Z-01A-01-TS1.f9bd85b3-3a3e-43c7-90f2-6bfe1ba2bd35.svs (578.20 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7586/10000] (7.92GB) Downloading: f1060adb-bee8-41f6-8997-2926d8967f33.rna_seq.augmented_star_gene_counts.tsv (4.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7587/10000] (7.93GB) Downloading: 78cac381-4aa6-4b8b-88ec-a80905fcd93c.methylation_array.sesame.level3betas.txt (12.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7588/10000] (7.94GB) Downloading: MINAE_p_TCGA_200_202_203_SNP_N_GenomeWideSNP_6_G05_955136.grch38.seg.v2.txt (0.04 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7589/10000] (7.94GB) Downloading: nationwidechildrens.org_clinical.TCGA-E9-A3HO.xml (0.11 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7590/10000] (7.94GB) Downloading: TCGA-BRCA.ce888acf-cb20-43f6-936b-be22ed0f817e.ascat2.allelic_specific.seg.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7591/10000] (7.94GB) Downloading: TCGA-E2-A10B-01A-01-MS1.0d808566-0f2e-4a22-b3fd-87d3f2db95b3.svs (388.56 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7592/10000] (8.32GB) Downloading: TCGA-E2-A10B-01Z-00-DX1.148CFC4B-EE65-4A7E-918F-10C72F37CB0F.svs (1278.23 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7593/10000] (9.57GB) Downloading: TCGA-E2-A10B-01A-21-A13D-20_RPPA_data.tsv (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7594/10000] (9.57GB) Downloading: 9c2b2cbd-75a1-4c32-92d5-11ea58fcb353.methylation_array.sesame.level3betas.txt (12.50 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7595/10000] (9.58GB) Downloading: ETUIS_p_TCGASNP_b80_83_N_GenomeWideSNP_6_B03_734686.grch38.seg.v2.txt (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7596/10000] (9.58GB) Downloading: DRIPS_p_TCGA_295_296_297_N_GenomeWideSNP_6_D03_1343776.grch38.seg.v2.txt (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7597/10000] (9.58GB) Downloading: TCGA-BRCA.fbdb3e72-fa98-48f6-be78-a112b93de1d4.ascat3.allelic_specific.seg.txt (0.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7598/10000] (9.58GB) Downloading: DRIPS_p_TCGA_295_296_297_N_GenomeWideSNP_6_G01_1343734.grch38.seg.v2.txt (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7599/10000] (9.58GB) Downloading: TCGA-BRCA.ce888acf-cb20-43f6-936b-be22ed0f817e.ascat3.allelic_specific.seg.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7600/10000] (9.58GB) Downloading: DRIPS_p_TCGA_295_296_297_N_GenomeWideSNP_6_G01_1343734.nocnv_grch38.seg.v2.txt (0.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7601/10000] (9.58GB) Downloading: TCGA-E9-A3HO-01A-11D-A89B-36.WholeGenome.RP-1657.cr.igv.reheader.seg.txt (0.16 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7602/10000] (9.58GB) Downloading: TCGA-OL-A5RU-01A-11D-A89D-36.WholeGenome.RP-1657.cr.igv.reheader.seg.txt (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7603/10000] (9.58GB) Downloading: TCGA-OL-A5RU-01A-01-TSA.EADD3E6A-8614-4BE9-B061-66E57EDD1781.svs (269.72 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7604/10000] (9.84GB) Downloading: TCGA-BRCA.fd183f1b-305a-48f9-a42b-a0d2711bcadb.ascat3.allelic_specific.seg.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7605/10000] (9.84GB) Downloading: f9a27067-7485-4c9f-986b-878aa6cd132c.rna_seq.augmented_star_gene_counts.tsv (4.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7606/10000] (9.85GB) Downloading: nationwidechildrens.org_biospecimen.TCGA-OL-A5RU.xml (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7607/10000] (9.85GB) Downloading: 2b4ab4eb-a512-4615-a0b2-76fecbb075bf.wxs.aliquot_ensemble_masked.maf.gz (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7608/10000] (9.85GB) Downloading: DRIPS_p_TCGA_295_296_297_N_GenomeWideSNP_6_D03_1343776.nocnv_grch38.seg.v2.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7609/10000] (9.85GB) Downloading: TCGA-AC-A6IW-01A-01-TS1.4DD4F175-C0C7-4B5C-B584-B6F2CBE9C3BF.svs (161.77 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7610/10000] (10.00GB) Downloading: TCGA-BRCA.da0238e7-c2e7-4a86-a3ef-3e49d1dfc228.ascat3.allelic_specific.seg.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7611/10000] (10.00GB) Downloading: nationwidechildrens.org_biospecimen.TCGA-OL-A66P.xml (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7612/10000] (10.00GB) Downloading: TCGA-AC-A3TN-01Z-00-DX1.F00E81C7-0CA2-49E8-A30F-DE423538E93C.svs (559.17 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7613/10000] (10.55GB) Downloading: GHOUL_p_TCGASNP_b85and51R_N_GenomeWideSNP_6_D06_735366.grch38.seg.v2.txt (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7614/10000] (10.55GB) Downloading: TCGA-E2-A14O-01Z-00-DX1.432DB252-35D4-4B02-B0A7-39BF85A38F89.svs (865.89 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7615/10000] (11.40GB) Downloading: 6ded3641-7be7-4402-82de-a0a91d31f6f2.mirbase21.isoforms.quantification.txt (0.34 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7616/10000] (11.40GB) Downloading: TCGA-E2-A14O-01A-03-TSC.710a66c3-f0a8-4c93-85e9-6fd9906ae5f9.svs (205.10 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7617/10000] (11.60GB) Downloading: TCGA-BRCA.7d50bbff-dd79-407c-8701-a42c332c404f.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7618/10000] (11.60GB) Downloading: TCGA-E2-A14O.42E9A561-B052-412E-B0FD-563DC097C3C5.PDF (0.32 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7619/10000] (11.60GB) Downloading: TCGA-BRCA.2def89d4-9863-4170-880b-4fec28a1465b.ascat3.allelic_specific.seg.txt (0.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7620/10000] (11.60GB) Downloading: 645290eb-8d7e-4342-abdc-b1bb1ff4b545.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7621/10000] (11.60GB) Downloading: TCGA-E2-A2P6.E6A21CE6-841D-4D9B-A563-80B9BAF6E682.PDF (0.13 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7622/10000] (11.60GB) Downloading: c005b7df-5ff8-498f-a2ec-d89a46049517.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7623/10000] (11.60GB) Downloading: KEBAB_p_TCGASNP_226_227_N_GenomeWideSNP_6_H07_1151588.grch38.seg.v2.txt (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7624/10000] (11.60GB) Downloading: KEBAB_p_TCGASNP_226_227_N_GenomeWideSNP_6_E02_1151484.nocnv_grch38.seg.v2.txt (0.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7625/10000] (11.60GB) Downloading: nationwidechildrens.org_ssf.TCGA-E9-A249.xml (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7626/10000] (11.60GB) Downloading: 573afc08-1729-4127-bdcf-845164c64ee5.mirbase21.mirnas.quantification.txt (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7627/10000] (11.60GB) Downloading: TCGA-XX-A899-01Z-00-DX1.08FE27B7-73B8-4CE3-ACF4-0689C81C140B.svs (1327.98 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7628/10000] (12.90GB) Downloading: f77c8703-fae0-40e5-99b6-771f66ac6c33.methylation_array.sesame.level3betas.txt (12.59 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7629/10000] (12.91GB) Downloading: 690cc36a-37f7-4872-a1f0-1d26d2db10bd.methylation_array.sesame.level3betas.txt (12.49 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7630/10000] (12.92GB) Downloading: 579a3ebc-d38d-4029-a05c-d3e8ea2549d8.wxs.aliquot_ensemble_masked.maf.gz (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7631/10000] (12.92GB) Downloading: TCGA-XX-A899.EA8A0A91-7A83-4EC9-B7A0-0C3300D1FD14.PDF (0.17 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7632/10000] (12.92GB) Downloading: 690cc36a-37f7-4872-a1f0-1d26d2db10bd_noid_Red.idat (7.72 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7633/10000] (12.93GB) Downloading: nationwidechildrens.org_ssf.TCGA-EW-A1P0.xml (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7634/10000] (12.93GB) Downloading: 17f25c6e-d2b3-41e2-9db1-f0716b756e63_noid_Grn.idat (0.69 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7635/10000] (12.93GB) Downloading: TCGA-BRCA.064b8a58-45eb-4abe-8627-5b4a8c69e6c7.absolute_liftover.gene_level_copy_number.v36.tsv (3.27 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7636/10000] (12.93GB) Downloading: TCGA-PL-A8LX-01A-01-DX1.9646D69F-A764-4246-9243-67A63006DE96.svs (172.89 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7637/10000] (13.10GB) Downloading: TCGA-A8-A086.D4E86E20-B75E-4CDA-83F2-22C481D4B9E8.PDF (0.07 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7638/10000] (13.10GB) Downloading: 74179e5e-2d3c-417e-8844-6740ea9fb2e5.rna_seq.augmented_star_gene_counts.tsv (4.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7639/10000] (13.11GB) Downloading: 773202c8-abfb-47e9-9ab6-a41916ae8641.mirbase21.isoforms.quantification.txt (0.36 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7640/10000] (13.11GB) Downloading: TCGA-A8-A086-01A-21-A13B-20_RPPA_data.tsv (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7641/10000] (13.11GB) Downloading: TCGA-BRCA.e28bac01-5bd3-4b66-83f7-2c778be9a0d5.ascat3.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7642/10000] (13.11GB) Downloading: TCGA-BRCA.064b8a58-45eb-4abe-8627-5b4a8c69e6c7.ascat3.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7643/10000] (13.11GB) Downloading: TCGA-PL-A8LX.E6DD0840-4D71-4EEC-B559-F6BFC9E7E68B.PDF (0.25 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7644/10000] (13.11GB) Downloading: CUSKS_p_TCGAb47_SNP_1N_GenomeWideSNP_6_G06_628282.grch38.seg.v2.txt (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7645/10000] (13.11GB) Downloading: nationwidechildrens.org_clinical.TCGA-S3-A6ZF.xml (0.11 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7646/10000] (13.11GB) Downloading: CUSKS_p_TCGAb47_SNP_1N_GenomeWideSNP_6_G08_628354.grch38.seg.v2.txt (0.03 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7647/10000] (13.11GB) Downloading: b56bae60-552c-48bf-a04d-999aa7cbde6f.mirbase21.isoforms.quantification.txt (0.33 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7648/10000] (13.11GB) Downloading: TCGA-S3-A6ZF-01Z-00-DX1.E50205A0-63CA-49DE-8831-2A8916DEF403.svs (916.95 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7649/10000] (14.01GB) Downloading: TCGA-BRCA.48198b9b-450c-40fd-a50b-fb804e663cb0.ascat2.allelic_specific.seg.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7650/10000] (14.01GB) Downloading: TCGA-A2-A3XZ-01A-51-A24A-20_RPPA_data.tsv (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7651/10000] (14.01GB) Downloading: e4559121-091f-41f2-9559-2abb1bbfd229.rna_seq.augmented_star_gene_counts.tsv (4.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7652/10000] (14.01GB) Downloading: TCGA-BRCA.7a55f6a3-a438-418f-a5a8-dcea12c977d9.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7653/10000] (14.02GB) Downloading: TCGA-S3-A6ZF.7B53A0D4-E13E-4573-B0A2-BB55AE54BD62.PDF (0.46 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7654/10000] (14.02GB) Downloading: nationwidechildrens.org_biospecimen.TCGA-A2-A3XZ.xml (0.05 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7655/10000] (14.02GB) Downloading: TCGA-BRCA.064b8a58-45eb-4abe-8627-5b4a8c69e6c7.gene_level_copy_number.v36.tsv (3.29 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7656/10000] (14.02GB) Downloading: TCGA-AC-A3EH-01A-02-TS2.FC290C5B-EADA-4C19-9F8E-A4E9D594CE07.svs (319.70 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7657/10000] (14.33GB) Downloading: TCGA-BRCA.0efe66fb-f938-47f8-8f5e-25f519faa2fc.ascat2.allelic_specific.seg.txt (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7658/10000] (14.33GB) Downloading: nationwidechildrens.org_ssf.TCGA-A2-A3XZ.xml (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7659/10000] (14.33GB) Downloading: KEBAB_p_TCGASNP_226_227_N_GenomeWideSNP_6_G08_1151498.grch38.seg.v2.txt (0.02 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7660/10000] (14.33GB) Downloading: TCGA-D8-A147-01A-11D-A894-36.WholeGenome.RP-1657.cr.igv.reheader.seg.txt (0.19 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7661/10000] (14.33GB) Downloading: 91fe5af4-d747-4c7c-bb39-66aff91758f3_noid_Grn.idat (7.72 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7662/10000] (14.34GB) Downloading: nationwidechildrens.org_clinical.TCGA-A2-A3XZ.xml (0.09 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7663/10000] (14.34GB) Downloading: nationwidechildrens.org_ssf.TCGA-D8-A147.xml (0.01 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7664/10000] (14.34GB) Downloading: GHOUL_p_TCGASNP_b85and51R_N_GenomeWideSNP_6_A04_735228.nocnv_grch38.seg.v2.txt (0.00 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7665/10000] (14.34GB) Downloading: 88a45253-0d80-4190-82c3-1587180f6612_noid_Red.idat (0.69 MB)... "
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "[7666/10000] (14.34GB) Downloading: TCGA-A2-A3XZ-01Z-00-DX1.B7A1344E-7015-4A21-B3D4-EB760161BE7C.svs (1173.81 MB)... "
+     ]
+    },
+    {
+     "name": "stderr",
+     "output_type": "stream",
+     "text": [
+      "It seems you are trying to upload a large folder at once. This might take some time and then fail if the folder is too large. For such cases, it is recommended to upload in smaller batches or to use `HfApi().upload_large_folder(...)`/`hf upload-large-folder` instead. For more details, check out https://huggingface.co/docs/huggingface_hub/main/en/guides/upload#upload-a-large-folder.\n"
+     ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "OK\n",
+      "\n",
+      "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!\n",
+      "CẢNH BÁO: Dung lượng đã đạt giới hạn (15.49 GB).\n",
+      "Đang tiến hành upload lên Hugging Face và giải phóng bộ nhớ...\n",
+      "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!\n",
+      "\n"
+     ]
+    },
+    {
+     "data": {
+      "application/vnd.jupyter.widget-view+json": {
+       "model_id": "d2c7c3237f2940bf8d3d504029836200",
+       "version_major": 2,
+       "version_minor": 0
+      },
+      "text/plain": [
+       "Processing Files (0 / 0): |          |  0.00B /  0.00B            "
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    },
+    {
+     "data": {
+      "application/vnd.jupyter.widget-view+json": {
+       "model_id": "753f25ce756b47239bf1510c50576596",
+       "version_major": 2,
+       "version_minor": 0
+      },
+      "text/plain": [
+       "New Data Upload: |          |  0.00B /  0.00B            "
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
     }
    ],
    "source": [

data/gdc_data_organized/7fe4670d-4626-459d-869b-ab15f478c6a7/9b413ca5-5a75-4ceb-9059-0f772af2fbe5.mirbase21.mirnas.quantification.txt

@@ -0,0 +1,1882 @@
+miRNA_ID	read_count	reads_per_million_miRNA_mapped	cross-mapped
+hsa-let-7a-1	10290	11306.064731	N
+hsa-let-7a-2	10281	11296.176045	N
+hsa-let-7a-3	10155	11157.734436	N
+hsa-let-7b	43457	47748.071431	N
+hsa-let-7c	1663	1827.209490	N
+hsa-let-7d	844	927.339031	N
+hsa-let-7e	1424	1564.609930	N
+hsa-let-7f-1	1935	2126.067566	N
+hsa-let-7f-2	1980	2175.510998	N
+hsa-let-7g	632	694.405531	N
+hsa-let-7i	399	438.398428	N
+hsa-mir-1-1	0	0.000000	N
+hsa-mir-1-2	1	1.098743	N
+hsa-mir-100	699	768.021307	N
+hsa-mir-101-1	2721	2989.679508	N
+hsa-mir-101-2	2861	3143.503518	N
+hsa-mir-103a-1	11725	12882.760833	Y
+hsa-mir-103a-2	11648	12798.157628	Y
+hsa-mir-103b-1	0	0.000000	N
+hsa-mir-103b-2	0	0.000000	N
+hsa-mir-105-1	0	0.000000	N
+hsa-mir-105-2	0	0.000000	N
+hsa-mir-106a	29	31.863545	Y
+hsa-mir-106b	283	310.944249	N
+hsa-mir-107	54	59.332118	Y
+hsa-mir-10a	13933	15308.785219	N
+hsa-mir-10b	33686	37012.254280	N
+hsa-mir-1178	0	0.000000	N
+hsa-mir-1179	0	0.000000	N
+hsa-mir-1180	14	15.382401	N
+hsa-mir-1181	0	0.000000	N
+hsa-mir-1182	0	0.000000	N
+hsa-mir-1183	0	0.000000	N
+hsa-mir-1184-1	0	0.000000	N
+hsa-mir-1184-2	0	0.000000	N
+hsa-mir-1184-3	0	0.000000	N
+hsa-mir-1185-1	0	0.000000	N
+hsa-mir-1185-2	0	0.000000	N
+hsa-mir-1193	0	0.000000	N
+hsa-mir-1197	1	1.098743	N
+hsa-mir-1199	0	0.000000	N
+hsa-mir-1200	0	0.000000	N
+hsa-mir-1202	0	0.000000	N
+hsa-mir-1203	0	0.000000	N
+hsa-mir-1204	0	0.000000	N
+hsa-mir-1205	0	0.000000	N
+hsa-mir-1206	0	0.000000	N
+hsa-mir-1207	0	0.000000	N
+hsa-mir-1208	0	0.000000	N
+hsa-mir-122	0	0.000000	N
+hsa-mir-1224	0	0.000000	N
+hsa-mir-1225	0	0.000000	N
+hsa-mir-1226	1	1.098743	N
+hsa-mir-1227	0	0.000000	N
+hsa-mir-1228	1	1.098743	N
+hsa-mir-1229	2	2.197486	N
+hsa-mir-1231	0	0.000000	N
+hsa-mir-1233-1	0	0.000000	N
+hsa-mir-1233-2	0	0.000000	N
+hsa-mir-1234	0	0.000000	N
+hsa-mir-1236	0	0.000000	N
+hsa-mir-1237	0	0.000000	N
+hsa-mir-1238	0	0.000000	N
+hsa-mir-124-1	0	0.000000	N
+hsa-mir-124-2	0	0.000000	N
+hsa-mir-124-3	0	0.000000	N
+hsa-mir-1243	0	0.000000	N
+hsa-mir-1244-1	0	0.000000	N
+hsa-mir-1244-2	0	0.000000	N
+hsa-mir-1244-3	0	0.000000	N
+hsa-mir-1244-4	0	0.000000	N
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+hsa-mir-1245b	0	0.000000	N
+hsa-mir-1246	1	1.098743	N
+hsa-mir-1247	5	5.493715	N
+hsa-mir-1248	2	2.197486	N
+hsa-mir-1249	2	2.197486	N
+hsa-mir-1250	1	1.098743	N
+hsa-mir-1251	0	0.000000	N
+hsa-mir-1252	0	0.000000	N
+hsa-mir-1253	0	0.000000	N
+hsa-mir-1254-1	1	1.098743	N
+hsa-mir-1254-2	0	0.000000	N
+hsa-mir-1255a	0	0.000000	N
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+hsa-mir-1256	0	0.000000	N
+hsa-mir-1257	0	0.000000	N
+hsa-mir-1258	0	0.000000	N
+hsa-mir-125a	698	766.922564	N
+hsa-mir-125b-1	137	150.527781	N
+hsa-mir-125b-2	142	156.021496	N
+hsa-mir-126	2460	2702.907603	N
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+hsa-mir-1266	7	7.691200	N
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+hsa-mir-1269a	1	1.098743	N
+hsa-mir-1269b	0	0.000000	N
+hsa-mir-127	538	591.123695	N
+hsa-mir-1270	3	3.296229	N
+hsa-mir-1271	4	4.394972	N
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+hsa-mir-128-1	104	114.269265	N
+hsa-mir-128-2	51	56.035889	N
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+hsa-mir-1286	0	0.000000	N
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+hsa-mir-1291	8	8.789943	N
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+hsa-mir-1295a	2	2.197486	N
+hsa-mir-1295b	0	0.000000	N
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+hsa-mir-1298	0	0.000000	N
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+hsa-mir-1301	18	19.777373	N
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+hsa-mir-1302-5	0	0.000000	N
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+hsa-mir-1306	11	12.086172	N
+hsa-mir-1307	967	1062.484412	N
+hsa-mir-130a	17	18.678630	N
+hsa-mir-130b	16	17.579887	N
+hsa-mir-132	63	69.220804	N
+hsa-mir-1321	0	0.000000	N
+hsa-mir-1322	0	0.000000	N
+hsa-mir-1323	0	0.000000	N
+hsa-mir-1324	0	0.000000	N
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+hsa-mir-133b	0	0.000000	N
+hsa-mir-134	358	393.349968	N
+hsa-mir-1343	1	1.098743	N
+hsa-mir-135a-1	5	5.493715	N
+hsa-mir-135a-2	4	4.394972	N
+hsa-mir-135b	1	1.098743	N
+hsa-mir-136	29	31.863545	N
+hsa-mir-137	0	0.000000	N
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+hsa-mir-138-2	0	0.000000	N
+hsa-mir-139	31	34.061031	N
+hsa-mir-140	276	303.253048	N
+hsa-mir-141	1490	1637.126963	N
+hsa-mir-142	3164	3476.422625	N
+hsa-mir-143	8976	9862.316524	N
+hsa-mir-144	17	18.678630	N
+hsa-mir-145	950	1043.805782	N
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+hsa-mir-1469	0	0.000000	N
+hsa-mir-146a	108	118.664236	N
+hsa-mir-146b	552	606.506096	N
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+hsa-mir-147a	0	0.000000	N
+hsa-mir-147b	3	3.296229	N
+hsa-mir-148a	46170	50728.960996	N
+hsa-mir-148b	367	403.238655	N
+hsa-mir-149	221	242.822187	N
+hsa-mir-150	187	205.464928	N
+hsa-mir-151a	1410	1549.227529	N
+hsa-mir-151b	0	0.000000	N
+hsa-mir-152	226	248.315902	N
+hsa-mir-153-1	1	1.098743	N
+hsa-mir-153-2	12	13.184915	N
+hsa-mir-1537	0	0.000000	N
+hsa-mir-1538	0	0.000000	N
+hsa-mir-1539	0	0.000000	N
+hsa-mir-154	6	6.592458	N
+hsa-mir-155	310	340.610308	N
+hsa-mir-1587	0	0.000000	N
+hsa-mir-15a	106	116.466750	N
+hsa-mir-15b	131	143.935324	N
+hsa-mir-16-1	346	380.165053	N
+hsa-mir-16-2	367	403.238655	N
+hsa-mir-17	467	513.112947	Y
+hsa-mir-181a-1	981	1077.866813	N
+hsa-mir-181a-2	1328	1459.130609	N
+hsa-mir-181b-1	201	220.847329	N
+hsa-mir-181b-2	164	180.193840	N
+hsa-mir-181c	135	148.330295	N
+hsa-mir-181d	49	53.838403	N
+hsa-mir-182	35033	38492.261004	N
+hsa-mir-1825	0	0.000000	N
+hsa-mir-1827	0	0.000000	N
+hsa-mir-183	13080	14371.557501	N
+hsa-mir-184	19	20.876116	N
+hsa-mir-185	104	114.269265	N
+hsa-mir-186	429	471.360716	N
+hsa-mir-187	4	4.394972	N
+hsa-mir-188	1	1.098743	N
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+hsa-mir-18b	0	0.000000	N
+hsa-mir-1908	0	0.000000	N
+hsa-mir-1909	0	0.000000	N
+hsa-mir-190a	6	6.592458	N
+hsa-mir-190b	99	108.775550	N
+hsa-mir-191	1930	2120.573851	N
+hsa-mir-1910	1	1.098743	N
+hsa-mir-1911	1	1.098743	N
+hsa-mir-1912	0	0.000000	N
+hsa-mir-1913	0	0.000000	N
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+hsa-mir-1915	0	0.000000	N
+hsa-mir-192	724	795.489880	Y
+hsa-mir-193a	379	416.423570	N
+hsa-mir-193b	90	98.886864	N
+hsa-mir-194-1	151	165.910182	N
+hsa-mir-194-2	162	177.996354	N
+hsa-mir-195	30	32.962288	N
+hsa-mir-196a-1	4	4.394972	N
+hsa-mir-196a-2	16	17.579887	N
+hsa-mir-196b	3081	3385.226962	N
+hsa-mir-197	492	540.581521	N
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+hsa-mir-1972-2	0	0.000000	N
+hsa-mir-1973	0	0.000000	N
+hsa-mir-1976	11	12.086172	N
+hsa-mir-198	0	0.000000	N
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+hsa-mir-199a-2	3887	4270.813762	Y
+hsa-mir-199b	5102	5605.786420	Y
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+hsa-mir-19b-1	61	67.023319	N
+hsa-mir-19b-2	54	59.332118	N
+hsa-mir-200a	971	1066.879383	N
+hsa-mir-200b	964	1059.188183	N
+hsa-mir-200c	12206	13411.256182	N
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+hsa-mir-203a	5773	6343.042925	N
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+hsa-mir-204	1	1.098743	N
+hsa-mir-205	1720	1889.837837	N
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+hsa-mir-21	268114	294588.361456	N
+hsa-mir-210	236	259.303331	N
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+hsa-mir-214	25	27.468573	N
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+hsa-mir-22	80224	88145.552673	N
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+hsa-mir-23c	0	0.000000	N
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+hsa-mir-26a-2	649	713.084160	N
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+hsa-mir-3202-2	0	0.000000	N
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+hsa-mir-320b-2	3	3.296229	N
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+hsa-mir-328	34	37.357260	N
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+hsa-mir-329-2	0	0.000000	N
+hsa-mir-330	18	19.777373	N
+hsa-mir-331	50	54.937146	N
+hsa-mir-335	45	49.443432	N
+hsa-mir-337	19	20.876116	N
+hsa-mir-338	70	76.912005	N
+hsa-mir-339	27	29.666059	N
+hsa-mir-33a	20	21.974859	N
+hsa-mir-33b	4	4.394972	N
+hsa-mir-340	37	40.653488	N
+hsa-mir-342	452	496.631804	N
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+hsa-mir-346	0	0.000000	N
+hsa-mir-34a	209	229.637272	N
+hsa-mir-34b	1	1.098743	N
+hsa-mir-34c	2	2.197486	N
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+hsa-mir-3591	0	0.000000	N
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+hsa-mir-3606	0	0.000000	N
+hsa-mir-3607	22	24.172344	N
+hsa-mir-3609	30	32.962288	N
+hsa-mir-361	233	256.007102	N
+hsa-mir-3610	0	0.000000	N
+hsa-mir-3611	0	0.000000	N
+hsa-mir-3612	0	0.000000	N
+hsa-mir-3613	13	14.283658	N
+hsa-mir-3614	0	0.000000	N
+hsa-mir-3615	1	1.098743	N
+hsa-mir-3616	1	1.098743	N
+hsa-mir-3617	0	0.000000	N
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+hsa-mir-3619	2	2.197486	N
+hsa-mir-362	6	6.592458	N
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+hsa-mir-3652	0	0.000000	N
+hsa-mir-3653	85	93.393149	N
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+hsa-mir-365a	56	61.529604	Y
+hsa-mir-365b	55	60.430861	Y
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+hsa-mir-3690-2	0	0.000000	N
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+hsa-mir-373	0	0.000000	N
+hsa-mir-374a	621	682.319358	N
+hsa-mir-374b	85	93.393149	N
+hsa-mir-374c	0	0.000000	N
+hsa-mir-375	6778	7447.279567	N
+hsa-mir-376a-1	1	1.098743	N
+hsa-mir-376a-2	0	0.000000	N
+hsa-mir-376b	0	0.000000	N
+hsa-mir-376c	2	2.197486	N
+hsa-mir-377	2	2.197486	N
+hsa-mir-378a	131	143.935324	N
+hsa-mir-378b	0	0.000000	N
+hsa-mir-378c	3	3.296229	N
+hsa-mir-378d-1	1	1.098743	N
+hsa-mir-378d-2	0	0.000000	N
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+hsa-mir-378j	0	0.000000	N
+hsa-mir-379	589	647.159585	N
+hsa-mir-380	0	0.000000	N
+hsa-mir-381	11	12.086172	N
+hsa-mir-382	44	48.344689	N
+hsa-mir-383	0	0.000000	N
+hsa-mir-384	0	0.000000	N
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+hsa-mir-3913-2	0	0.000000	N
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+hsa-mir-3929	0	0.000000	N
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+hsa-mir-3941	0	0.000000	N
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+hsa-mir-3978	0	0.000000	N
+hsa-mir-409	46	50.542175	N
+hsa-mir-410	5	5.493715	N
+hsa-mir-411	3	3.296229	N
+hsa-mir-412	1	1.098743	N
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+hsa-mir-422a	0	0.000000	N
+hsa-mir-423	146	160.416468	N
+hsa-mir-424	52	57.134632	N
+hsa-mir-425	272	298.858076	N
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+hsa-mir-450a-2	3	3.296229	N
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+hsa-mir-4540	0	0.000000	N
+hsa-mir-455	357	392.251225	N
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+hsa-mir-4635	0	0.000000	N
+hsa-mir-4636	1	1.098743	N
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+hsa-mir-4649	1	1.098743	N
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+hsa-mir-4668	9	9.888686	N
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+hsa-mir-4743	0	0.000000	N
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+hsa-mir-4747	0	0.000000	N
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+hsa-mir-4771-2	0	0.000000	N
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+hsa-mir-4783	0	0.000000	N
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+hsa-mir-4785	0	0.000000	N
+hsa-mir-4786	0	0.000000	N
+hsa-mir-4787	3	3.296229	N
+hsa-mir-4788	1	1.098743	N
+hsa-mir-4789	0	0.000000	N
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+hsa-mir-4803	0	0.000000	N
+hsa-mir-4804	1	1.098743	N
+hsa-mir-483	3	3.296229	N
+hsa-mir-484	79	86.800691	N
+hsa-mir-485	9	9.888686	N
+hsa-mir-486-1	3	3.296229	N
+hsa-mir-486-2	6	6.592458	N
+hsa-mir-487a	1	1.098743	N
+hsa-mir-487b	2	2.197486	N
+hsa-mir-488	0	0.000000	N
+hsa-mir-489	4	4.394972	N
+hsa-mir-490	0	0.000000	N
+hsa-mir-491	4	4.394972	N
+hsa-mir-492	0	0.000000	N
+hsa-mir-493	6	6.592458	N
+hsa-mir-494	1	1.098743	N
+hsa-mir-495	7	7.691200	N
+hsa-mir-496	1	1.098743	N
+hsa-mir-497	18	19.777373	N
+hsa-mir-498	0	0.000000	N
+hsa-mir-4999	0	0.000000	N
+hsa-mir-499a	1	1.098743	N
+hsa-mir-499b	0	0.000000	N
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+hsa-mir-5009	0	0.000000	N
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+hsa-mir-500b	4	4.394972	Y
+hsa-mir-501	36	39.554745	N
+hsa-mir-5010	0	0.000000	N
+hsa-mir-5011	0	0.000000	N
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+hsa-mir-503	17	18.678630	N
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+hsa-mir-5047	0	0.000000	N
+hsa-mir-505	34	37.357260	N
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+hsa-mir-5089	0	0.000000	N
+hsa-mir-509-1	2	2.197486	N
+hsa-mir-509-2	3	3.296229	N
+hsa-mir-509-3	3	3.296229	N
+hsa-mir-5090	1	1.098743	N
+hsa-mir-5091	0	0.000000	N
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+hsa-mir-5188	0	0.000000	N
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+hsa-mir-532	593	651.554556	N
+hsa-mir-539	24	26.369830	N
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+hsa-mir-542	130	142.836581	N
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+hsa-mir-548s	0	0.000000	N
+hsa-mir-548t	0	0.000000	N
+hsa-mir-548u	0	0.000000	N
+hsa-mir-548v	3	3.296229	N
+hsa-mir-548w	0	0.000000	N
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+hsa-mir-548z	0	0.000000	N
+hsa-mir-549a	1	1.098743	N
+hsa-mir-550a-1	1	1.098743	N
+hsa-mir-550a-2	1	1.098743	N
+hsa-mir-550a-3	2	2.197486	N
+hsa-mir-550b-1	0	0.000000	N
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+hsa-mir-552	0	0.000000	N
+hsa-mir-553	0	0.000000	N
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+hsa-mir-5585	0	0.000000	N
+hsa-mir-5586	14	15.382401	N
+hsa-mir-5587	0	0.000000	N
+hsa-mir-5588	0	0.000000	N
+hsa-mir-5589	0	0.000000	N
+hsa-mir-559	0	0.000000	N
+hsa-mir-5590	0	0.000000	N
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+hsa-mir-5684	0	0.000000	N
+hsa-mir-5685	0	0.000000	N
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+hsa-mir-5688	0	0.000000	N
+hsa-mir-5689	0	0.000000	N
+hsa-mir-569	0	0.000000	N
+hsa-mir-5690	1	1.098743	N
+hsa-mir-5691	0	0.000000	N
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+hsa-mir-5692a-2	0	0.000000	N
+hsa-mir-5692b	0	0.000000	N
+hsa-mir-5692c-1	0	0.000000	N
+hsa-mir-5692c-2	0	0.000000	N
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+hsa-mir-5694	1	1.098743	N
+hsa-mir-5695	0	0.000000	N
+hsa-mir-5696	0	0.000000	N
+hsa-mir-5697	0	0.000000	N
+hsa-mir-5698	1	1.098743	N
+hsa-mir-5699	0	0.000000	N
+hsa-mir-570	0	0.000000	N
+hsa-mir-5700	0	0.000000	N
+hsa-mir-5701-1	0	0.000000	N
+hsa-mir-5701-2	0	0.000000	N
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+hsa-mir-5703	0	0.000000	N
+hsa-mir-5704	0	0.000000	N
+hsa-mir-5705	0	0.000000	N
+hsa-mir-5706	1	1.098743	N
+hsa-mir-5707	0	0.000000	N
+hsa-mir-5708	0	0.000000	N
+hsa-mir-571	0	0.000000	N
+hsa-mir-572	0	0.000000	N
+hsa-mir-573	0	0.000000	N
+hsa-mir-5739	0	0.000000	N
+hsa-mir-574	153	168.107668	N
+hsa-mir-575	0	0.000000	N
+hsa-mir-576	5	5.493715	N
+hsa-mir-577	1	1.098743	N
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+hsa-mir-873	0	0.000000	N
+hsa-mir-874	46	50.542175	N
+hsa-mir-875	0	0.000000	N
+hsa-mir-876	0	0.000000	N
+hsa-mir-877	3	3.296229	N
+hsa-mir-885	0	0.000000	N
+hsa-mir-887	0	0.000000	N
+hsa-mir-888	0	0.000000	N
+hsa-mir-889	4	4.394972	N
+hsa-mir-890	0	0.000000	N
+hsa-mir-891a	1	1.098743	N
+hsa-mir-891b	0	0.000000	N
+hsa-mir-892a	0	0.000000	N
+hsa-mir-892b	0	0.000000	N
+hsa-mir-892c	0	0.000000	N
+hsa-mir-9-1	63	69.220804	N
+hsa-mir-9-2	49	53.838403	N
+hsa-mir-9-3	61	67.023319	N
+hsa-mir-920	0	0.000000	N
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+hsa-mir-922	0	0.000000	N
+hsa-mir-924	0	0.000000	N
+hsa-mir-92a-1	2384	2619.403141	N
+hsa-mir-92a-2	2188	2404.049527	N
+hsa-mir-92b	134	147.231552	N
+hsa-mir-93	5387	5918.928154	N
+hsa-mir-933	0	0.000000	N
+hsa-mir-934	0	0.000000	N
+hsa-mir-935	1	1.098743	N
+hsa-mir-936	0	0.000000	N
+hsa-mir-937	0	0.000000	N
+hsa-mir-938	0	0.000000	N
+hsa-mir-939	1	1.098743	N
+hsa-mir-940	3	3.296229	N
+hsa-mir-941-1	0	0.000000	N
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+hsa-mir-942	3	3.296229	N
+hsa-mir-943	0	0.000000	N
+hsa-mir-944	0	0.000000	N
+hsa-mir-95	5	5.493715	N
+hsa-mir-9500	0	0.000000	N
+hsa-mir-96	31	34.061031	N
+hsa-mir-98	57	62.628347	N
+hsa-mir-99a	216	237.328472	N
+hsa-mir-99b	33263	36547.486021	N

data/gdc_data_organized/7fe4670d-4626-459d-869b-ab15f478c6a7/CUSKS_p_TCGAb47_SNP_1N_GenomeWideSNP_6_E03_628254.grch38.seg.v2.txt

@@ -0,0 +1,387 @@
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+<?xml version="1.0" encoding="UTF-8"?>
+<ssf:tcga_bcr xsi:schemaLocation="http://tcga.nci/bcr/xml/ssf/2.7 https://raw.githubusercontent.com/nchbcr/xsd/2.7/tcga.nci/bcr/xml/ssf/2.7/TCGA_BCR.SSF.xsd" schemaVersion="2.7" xmlns:ssf="http://tcga.nci/bcr/xml/ssf/2.7" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:admin="http://tcga.nci/bcr/xml/administration/2.7" xmlns:shared="http://tcga.nci/bcr/xml/shared/2.7" xmlns:ssf_disease="http://tcga.nci/bcr/xml/ssf_disease/2.7">
+    <admin:admin>
+        <admin:bcr xsd_ver="1.17">Nationwide Children's Hospital</admin:bcr>
+        <admin:file_uuid xsd_ver="2.6">437D914C-9465-44D5-84EB-FB9C59672B2A</admin:file_uuid>
+        <admin:batch_number xsd_ver="1.17">47.98.0</admin:batch_number>
+        <admin:project_code xsd_ver="2.7">TCGA</admin:project_code>
+        <admin:disease_code xsd_ver="2.6">BRCA</admin:disease_code>
+        <admin:day_of_dcc_upload xsd_ver="1.17">22</admin:day_of_dcc_upload>
+        <admin:month_of_dcc_upload xsd_ver="1.17">12</admin:month_of_dcc_upload>
+        <admin:year_of_dcc_upload xsd_ver="1.17">2016</admin:year_of_dcc_upload>
+        <admin:patient_withdrawal>
+            <admin:withdrawn>false</admin:withdrawn>
+        </admin:patient_withdrawal>
+        <admin:program xsi:nil="true" xsd_ver="2.7"/>
+        <admin:dbgap_registration_code xsi:nil="true" xsd_ver="2.7"/>
+    </admin:admin>
+    <ssf:patient>
+        <admin:additional_studies/>
+        <shared:bcr_patient_barcode preferred_name="" display_order="9999" cde="2003301" cde_ver="" xsd_ver="1.8" owner="TSS" procurement_status="Completed" restricted="false">TCGA-A8-A08A</shared:bcr_patient_barcode>
+        <shared:bcr_patient_uuid preferred_name="" display_order="9999" cde="" cde_ver="" xsd_ver="2.3" owner="TSS" procurement_status="Completed" restricted="false">7fe4670d-4626-459d-869b-ab15f478c6a7</shared:bcr_patient_uuid>
+        <shared:tissue_source_site cde="" cde_ver="" xsd_ver="2.4" owner="TSS" procurement_status="Completed" restricted="false">A8</shared:tissue_source_site>
+        <shared:patient_id cde="" cde_ver="" xsd_ver="2.4" owner="TSS" procurement_status="Completed" restricted="false">A08A</shared:patient_id>
+        <shared:hiv_status preferred_name="hiv_status" display_order="9999" cde="2180464" cde_ver="1.000" xsd_ver="2.5" tier="" owner="TSS" procurement_status="Not Applicable" restricted="false" xsi:nil="true"/>
+        <ssf:tumor_samples>
+            <ssf:tumor_sample>
+                <ssf:bcr_sample_uuid preferred_name="" display_order="9999" cde="" cde_ver="" xsd_ver="2.3" tier="2" owner="TSS" procurement_status="Completed" restricted="false">8e464b23-588b-4d8d-a094-03efeb76789c</ssf:bcr_sample_uuid>
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+                <shared:method_of_sample_procurement preferred_name="tumor_sample_procurement_method" display_order="11" cde="3103514" cde_ver="1.000" xsd_ver="2.3" tier="1" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186612">Other Method, specify</shared:method_of_sample_procurement>
+                <shared:other_method_of_sample_procurement preferred_name="cancer_procurement_method_other" display_order="12" cde="2006730" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186613">wide excision</shared:other_method_of_sample_procurement>
+                <ssf:vessel_used preferred_name="tumor_sample_vessel_used" display_order="16" cde="3081940" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186614">Cryovial</ssf:vessel_used>
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+                <shared:maximum_tumor_dimension preferred_name="tumor_resected_max_dimension" display_order="9999" cde="64215" cde_ver="3.000" xsd_ver="2.6" tier="2" owner="TSS" procurement_status="Not Applicable" restricted="false" xsi:nil="true"/>
+                <ssf:tumor_weight preferred_name="tumor_sample_weight" display_order="23" cde="3081946" cde_ver="1.000" xsd_ver="2.5" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186616">100</ssf:tumor_weight>
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+                <shared:tumor_nuclei_percent preferred_name="tumor_nuclei_percent" display_order="24" cde="2841225" cde_ver="1.000" xsd_ver="2.5" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186617">70</shared:tumor_nuclei_percent>
+                <shared:tumor_necrosis_percent preferred_name="necrosis_percent" display_order="25" cde="2841237" cde_ver="1.000" xsd_ver="2.5" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186618">20</shared:tumor_necrosis_percent>
+                <ssf:days_to_pathology_review floored="true" precision="month" xsd_ver="2.5" tier="2" cde="3288497" owner="TSS" procurement_status="Completed" preferred_name="tss_pathology_review_days_to" display_order="63" cde_ver="1.000">0</ssf:days_to_pathology_review>
+                <ssf:path_confirm_tumor_nuclei_metrics preferred_name="tumor_nuclei_requirements_indicator" display_order="64" cde="3288520" cde_ver="1.000" xsd_ver="2.5" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186689">YES</ssf:path_confirm_tumor_nuclei_metrics>
+                <ssf:path_confirm_tumor_necrosis_metrics preferred_name="necrosis_requirements_indicator" display_order="65" cde="3288524" cde_ver="1.000" xsd_ver="2.5" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186690">YES</ssf:path_confirm_tumor_necrosis_metrics>
+                <ssf:path_confirm_report_attached preferred_name="tss_pathology_submitted" display_order="66" cde="3288292" cde_ver="1.000" xsd_ver="2.5" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186692">YES</ssf:path_confirm_report_attached>
+                <ssf:path_confirm_diagnosis_matching preferred_name="histologic_dx_consistent" display_order="68" cde="3288300" cde_ver="1.000" xsd_ver="1.8" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186691">YES</ssf:path_confirm_diagnosis_matching>
+                <ssf:reason_path_confirm_diagnosis_not_matching preferred_name="histologic_dx_inconsistent_reason" display_order="69" cde="3288315" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Not Available" restricted="false"/>
+                <ssf:top_slide_submitted preferred_name="tumor_sample_top_slide_submitted" display_order="999" cde="3081944" cde_ver="1.000" xsd_ver="1.8" tier="2" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186620">NO</ssf:top_slide_submitted>
+                <ssf:digital_image_submitted preferred_name="tumor_sample_image_submitted" display_order="999" cde="3081948" cde_ver="1.000" xsd_ver="1.8" tier="2" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186622">NO</ssf:digital_image_submitted>
+                <ssf:ffpe_tumor_slide_submitted preferred_name="ffpe_slide_submitted_indicator" display_order="9999" cde="3295811" cde_ver="1.000" xsd_ver="2.5" tier="" owner="TSS" procurement_status="Completed" restricted="false">NO</ssf:ffpe_tumor_slide_submitted>
+                <ssf:submitted_for_lce preferred_name="tumor_sample_bcr_macrodissection" display_order="9999" cde="3288488" cde_ver="1.000" xsd_ver="1.8" tier="2" owner="TSS" procurement_status="Not Available" restricted="false"/>
+                <shared:other_dx preferred_name="history_other_malignancy" display_order="14" cde="3382736" cde_ver="2.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186694">No</shared:other_dx>
+                <shared:history_of_neoadjuvant_treatment preferred_name="history_neoadjuvant_treatment" display_order="15" cde="3382737" cde_ver="1.000" xsd_ver="2.4" tier="1" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186694">No</shared:history_of_neoadjuvant_treatment>
+                <shared:consent_or_death_status preferred_name="patient_consent_status" display_order="72" cde="3288361" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186695">Consented</shared:consent_or_death_status>
+                <shared:days_to_consent precision="month" xsd_ver="2.5" tier="1" cde="3288498" owner="TSS" procurement_status="Completed" preferred_name="patient_consent_days_to" display_order="76" cde_ver="1.000">0</shared:days_to_consent>
+                <shared:country preferred_name="tumor_sample_procurement_country" display_order="13" cde="3203072" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="740712">Germany</shared:country>
+                <ssf_disease:disease_details/>
+                <ssf:tumor_histologies>
+                    <ssf:tumor_histology>
+                        <shared:histological_type preferred_name="histologic_diagnosis" display_order="3" cde="3081934" cde_ver="3.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186605">Infiltrating Ductal Carcinoma</shared:histological_type>
+                        <shared:histological_type_other preferred_name="histologic_diagnosis_other" display_order="31" cde="3124492" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Not Applicable" restricted="false" xsi:nil="true"/>
+                        <shared:histological_percentage preferred_name="histologic_diagnosis_percent" display_order="9999" cde="3729998" cde_ver="1.000" xsd_ver="2.6" tier="2" owner="TSS" procurement_status="Not Applicable" restricted="false"/>
+                        <shared:tumor_morphology_percentage preferred_name="" display_order="9999" cde="3729984" cde_ver="1.000" xsd_ver="2.6" tier="2" owner="TSS" procurement_status="Not Applicable" restricted="false" xsi:nil="true"/>
+                    </ssf:tumor_histology>
+                </ssf:tumor_histologies>
+                <ssf:tumor_locations>
+                    <ssf:tumor_focality preferred_name="tumor_focality" display_order="9999" cde="3174022" cde_ver="1.000" xsd_ver="2.5" tier="2" owner="TSS" procurement_status="Not Applicable" restricted="false"/>
+                    <ssf:laterality preferred_name="" display_order="9999" cde="4742852" cde_ver="" xsd_ver="2.6" tier="" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186608">Left</ssf:laterality>
+                    <ssf:tumor_location>
+                        <ssf:site_of_disease preferred_name="" display_order="9999" cde="4742851" cde_ver="" xsd_ver="2.6" tier="2" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186608">Breast</ssf:site_of_disease>
+                        <ssf:site_of_disease_text preferred_name="" display_order="9999" cde="4742871" cde_ver="" xsd_ver="2.6" tier="2" owner="TSS" procurement_status="Not Available" restricted="false"/>
+                        <ssf:site_of_disease_description preferred_name="" display_order="9999" cde="4742918" cde_ver="" xsd_ver="2.6" tier="2" owner="TSS" procurement_status="Not Available" restricted="false" source_system_identifier="186608"/>
+                    </ssf:tumor_location>
+                </ssf:tumor_locations>
+            </ssf:tumor_sample>
+        </ssf:tumor_samples>
+        <ssf:normal_controls>
+            <ssf:normal_control>
+                <ssf:bcr_sample_uuid preferred_name="" display_order="9999" cde="" cde_ver="" xsd_ver="2.3" tier="2" owner="TSS" procurement_status="Completed" restricted="false">05b357ef-8129-4b92-8775-42bedec7b7f5</ssf:bcr_sample_uuid>
+                <ssf:method_of_normal_sample_procurement preferred_name="normal_control_method" display_order="50" cde="3288147" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Completed" restricted="false" source_system_identifier="186653">Blood Draw</ssf:method_of_normal_sample_procurement>
+                <ssf:other_method_of_normal_sample_procurement preferred_name="normal_control_method_other" display_order="51" cde="3288151" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Not Applicable" restricted="false" source_system_identifier="186654"/>
+                <ssf:days_to_normal_sample_procurement precision="month" xsd_ver="2.3" tier="1" cde="3288496" owner="TSS" procurement_status="Completed" preferred_name="normal_control_procurement_days_to" display_order="55" cde_ver="1.000">0</ssf:days_to_normal_sample_procurement>
+                <ssf:normal_sample_site_proximity_to_tumor preferred_name="normal_control_proximity_to_tumor" display_order="59" cde="3088708" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Not Available" restricted="false" source_system_identifier="186655"/>
+                <ssf:ncedna_dna_conc preferred_name="normal_control_DNA_concentration" display_order="48" cde="3288187" cde_ver="1.000" xsd_ver="2.5" owner="TSS" procurement_status="Not Available" restricted="false" source_system_identifier="186646"/>
+                <ssf:ncedna_dna_qm preferred_name="normal_control_DNA_quant_method" display_order="47" cde="3288186" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Not Available" restricted="false" source_system_identifier="186645"/>
+                <ssf:ncedna_dna_qty preferred_name="normal_control_DNA_quantity" display_order="46" cde="3288185" cde_ver="1.000" xsd_ver="2.5" owner="TSS" procurement_status="Not Available" restricted="false" source_system_identifier="186644"/>
+                <ssf:ncedna_dna_vol preferred_name="normal_control_DNA_volume" display_order="49" cde="3288188" cde_ver="1.000" xsd_ver="2.5" owner="TSS" procurement_status="Not Available" restricted="false" source_system_identifier="186647"/>
+                <ssf:normal_control_locations>
+                    <ssf:normal_control_location>
+                        <ssf:normal_tissue_anatomic_site preferred_name="" display_order="57" cde="4132152" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Not Available" restricted="false" source_system_identifier="186648"/>
+                        <ssf:other_anatomic_site_normal_tissue preferred_name="normal_control_site_other" display_order="58" cde="3288189" cde_ver="1.000" xsd_ver="2.5" tier="1" owner="TSS" procurement_status="Not Applicable" restricted="false" source_system_identifier="186649"/>
+                    </ssf:normal_control_location>
+                </ssf:normal_control_locations>
+            </ssf:normal_control>
+        </ssf:normal_controls>
+    </ssf:patient>
+</ssf:tcga_bcr>

data/gdc_data_organized/80419545-4e5d-4baf-8948-f84589b5ef3e/MOHEL_p_TCGA_271_274_275_N_GenomeWideSNP_6_C10_1320354.nocnv_grch38.seg.v2.txt

@@ -0,0 +1,75 @@
+GDC_Aliquot	Chromosome	Start	End	Num_Probes	Segment_Mean
+f552a80d-3e4c-4c0b-b827-806305e48a35	1	3301765	247650984	129780	0.0064
+f552a80d-3e4c-4c0b-b827-806305e48a35	2	480597	241537572	132201	-0.0004
+f552a80d-3e4c-4c0b-b827-806305e48a35	3	2170634	197812401	107172	-0.0019
+f552a80d-3e4c-4c0b-b827-806305e48a35	4	1059384	120848486	67558	-0.0007
+f552a80d-3e4c-4c0b-b827-806305e48a35	4	120849201	121068094	133	0.5467
+f552a80d-3e4c-4c0b-b827-806305e48a35	4	121074543	135026726	6900	-0.003
+f552a80d-3e4c-4c0b-b827-806305e48a35	4	135026760	135026786	2	-1.521
+f552a80d-3e4c-4c0b-b827-806305e48a35	4	135027300	156322044	12206	-0.002
+f552a80d-3e4c-4c0b-b827-806305e48a35	4	156325110	156325728	2	1.8088
+f552a80d-3e4c-4c0b-b827-806305e48a35	4	156325947	187842528	16713	-0.0031
+f552a80d-3e4c-4c0b-b827-806305e48a35	5	913983	19214169	11727	0.0106
+f552a80d-3e4c-4c0b-b827-806305e48a35	5	19214693	19217768	2	-1.3541
+f552a80d-3e4c-4c0b-b827-806305e48a35	5	19218594	31069506	6239	0.0035
+f552a80d-3e4c-4c0b-b827-806305e48a35	5	31069570	31070178	2	-1.3695
+f552a80d-3e4c-4c0b-b827-806305e48a35	5	31075648	72745584	20194	0.0082
+f552a80d-3e4c-4c0b-b827-806305e48a35	5	72749423	72749805	2	-1.4755
+f552a80d-3e4c-4c0b-b827-806305e48a35	5	72752708	180934240	62957	0.01
+f552a80d-3e4c-4c0b-b827-806305e48a35	6	1011760	1366438	361	0.4865
+f552a80d-3e4c-4c0b-b827-806305e48a35	6	1371901	2601935	829	0.0031
+f552a80d-3e4c-4c0b-b827-806305e48a35	6	2608761	2707415	105	0.5086
+f552a80d-3e4c-4c0b-b827-806305e48a35	6	2710769	170596889	95874	-0.0007
+f552a80d-3e4c-4c0b-b827-806305e48a35	7	664936	158592540	81943	-0.0013
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	667625	30579491	18062	-0.1269
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	30579514	43042692	7027	0.2162
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	43043328	69402842	13037	0.0001
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	69407039	69414310	2	-1.3873
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	69425100	76003091	4089	0.0002
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	76004976	76551573	315	0.2182
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	76553677	80062650	1901	-0.0035
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	80063035	81139995	599	0.1138
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	81140261	81959218	469	-0.0131
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	81961079	85828939	1887	0.1014
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	85829000	87357981	794	-0.0092
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	87360626	107006082	11229	0.1096
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	107011133	109618496	1519	0.3209
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	109618764	111213438	814	0.1893
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	111222410	117266463	3247	0.3078
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	117268746	123666525	4343	0.2141
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	123670265	123670504	2	-0.9597
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	123671494	131968491	5726	0.214
+f552a80d-3e4c-4c0b-b827-806305e48a35	8	131968707	144182542	7182	-0.1061
+f552a80d-3e4c-4c0b-b827-806305e48a35	9	789794	138044505	68488	0.001
+f552a80d-3e4c-4c0b-b827-806305e48a35	10	366509	133411599	81294	0.0014
+f552a80d-3e4c-4c0b-b827-806305e48a35	11	456012	134272740	77569	0.0031
+f552a80d-3e4c-4c0b-b827-806305e48a35	12	780472	132605822	74358	0.0023
+f552a80d-3e4c-4c0b-b827-806305e48a35	13	18874255	114226675	56993	-0.0016
+f552a80d-3e4c-4c0b-b827-806305e48a35	14	20033191	31941962	5965	0.009
+f552a80d-3e4c-4c0b-b827-806305e48a35	14	31942043	31942416	2	1.4726
+f552a80d-3e4c-4c0b-b827-806305e48a35	14	31947298	105533894	43823	0.0009
+f552a80d-3e4c-4c0b-b827-806305e48a35	15	23437561	43524078	10051	-0.0406
+f552a80d-3e4c-4c0b-b827-806305e48a35	15	43524719	95312953	31040	0.0048
+f552a80d-3e4c-4c0b-b827-806305e48a35	15	95313389	96884897	1150	0.122
+f552a80d-3e4c-4c0b-b827-806305e48a35	15	96888838	101000996	2340	0.0084
+f552a80d-3e4c-4c0b-b827-806305e48a35	15	101003085	101085446	71	0.5043
+f552a80d-3e4c-4c0b-b827-806305e48a35	15	101085606	101344124	140	0.0273
+f552a80d-3e4c-4c0b-b827-806305e48a35	16	603333	6522048	2711	0.0168
+f552a80d-3e4c-4c0b-b827-806305e48a35	16	6526200	6527388	4	-0.9814
+f552a80d-3e4c-4c0b-b827-806305e48a35	16	6527629	7652808	421	0.02
+f552a80d-3e4c-4c0b-b827-806305e48a35	16	7654201	7654406	3	1.0389
+f552a80d-3e4c-4c0b-b827-806305e48a35	16	7657917	46470502	10900	0.0121
+f552a80d-3e4c-4c0b-b827-806305e48a35	16	46473753	89317317	27168	-0.1129
+f552a80d-3e4c-4c0b-b827-806305e48a35	17	1074619	10778106	5044	0.0008
+f552a80d-3e4c-4c0b-b827-806305e48a35	17	10779694	10780981	2	-1.9157
+f552a80d-3e4c-4c0b-b827-806305e48a35	17	10782907	82959812	32243	0.0054
+f552a80d-3e4c-4c0b-b827-806305e48a35	18	326691	79349796	42971	0.0014
+f552a80d-3e4c-4c0b-b827-806305e48a35	19	283868	58370362	24157	0.0049
+f552a80d-3e4c-4c0b-b827-806305e48a35	20	472817	63588502	37564	0.0039
+f552a80d-3e4c-4c0b-b827-806305e48a35	21	13974127	46262057	20592	-0.0027
+f552a80d-3e4c-4c0b-b827-806305e48a35	22	16934932	48940621	17097	0.0061
+f552a80d-3e4c-4c0b-b827-806305e48a35	X	3236359	104301946	40352	0.0009
+f552a80d-3e4c-4c0b-b827-806305e48a35	X	104302069	104302106	2	-2.0872
+f552a80d-3e4c-4c0b-b827-806305e48a35	X	104306407	125140658	10176	0.0069
+f552a80d-3e4c-4c0b-b827-806305e48a35	X	125145863	125150537	7	-0.9578
+f552a80d-3e4c-4c0b-b827-806305e48a35	X	125153670	155677414	13428	0.0033

data/gdc_data_organized/80419545-4e5d-4baf-8948-f84589b5ef3e/TCGA-BRCA.f552a80d-3e4c-4c0b-b827-806305e48a35.ascat2.allelic_specific.seg.txt

@@ -0,0 +1,69 @@
+GDC_Aliquot	Chromosome	Start	End	Copy_Number	Major_Copy_Number	Minor_Copy_Number
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr1	62920	248930189	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr2	12784	88833611	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr2	88834118	89118119	6	6	0
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr2	89119438	242147305	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr3	20930	189642489	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr3	189642965	189646849	0	0	0
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr3	189653199	198169247	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr4	68929	20944896	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr4	20946096	20959017	1	1	0
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr4	20959056	25076144	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr4	25076263	25086631	1	1	0
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr4	25086749	102196773	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr4	102203985	102253426	1	1	0
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr4	102253662	120852570	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr4	120853360	121067700	3	2	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr4	121068094	188876107	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr4	188876462	188885170	1	1	0
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr4	188885226	190106768	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr5	15532	181363319	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr6	149661	787340	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr6	787587	1365479	3	2	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr6	1365876	2604411	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr6	2604486	2707415	3	2	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr6	2710769	170741917	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr7	43259	18779052	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr7	18779183	18790841	3	2	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr7	18790866	159334314	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr8	81254	145072769	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr9	46587	6682871	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr9	6684753	6909892	4	3	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr9	6910769	80923945	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr9	80924049	80933007	4	2	2
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr9	80935163	113978355	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr9	113978906	114005376	3	2	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr9	114005490	138200944	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr10	45792	133654968	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr11	198510	135074876	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr12	51460	31203382	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr12	31204145	31231775	4	3	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr12	31232160	133201603	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr13	18452809	114342922	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr14	18239283	105731651	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr14	105733039	106370181	4	4	0
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr14	106370708	106877229	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr15	19811075	23487034	3	2	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr15	23488326	101928837	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr16	10777	35282555	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr16	35282935	35374520	3	2	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr16	35375297	76200286	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr16	76201036	76201965	1	1	0
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr16	76202164	90096867	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr17	150733	83091923	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr18	48133	80257174	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr19	90910	58586487	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr20	80664	64324800	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr21	12973348	45903608	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr21	45903828	45922202	4	2	2
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr21	45922608	46677045	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chr22	16392123	50796027	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chrX	251810	30382270	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chrX	30383058	30393352	3	2	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chrX	30395888	95141627	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chrX	95141864	95158595	3	2	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chrX	95159272	138190533	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chrX	138190600	138237186	1	1	0
+f552a80d-3e4c-4c0b-b827-806305e48a35	chrX	138237573	156004181	2	1	1
+f552a80d-3e4c-4c0b-b827-806305e48a35	chrY	2782397	26653788	0	0	0
+f552a80d-3e4c-4c0b-b827-806305e48a35	chrY	56872112	56872112	1	1	0

data/gdc_data_organized/80419545-4e5d-4baf-8948-f84589b5ef3e/TCGA-BRCA.f552a80d-3e4c-4c0b-b827-806305e48a35.ascat3.allelic_specific.seg.txt

@@ -0,0 +1,30 @@
+GDC_Aliquot	Chromosome	Start	End	Copy_Number	Major_Copy_Number	Minor_Copy_Number
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data/gdc_data_organized/805bfe39-3695-43c2-93e4-d66d0559b89f/CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_C05_777716.nocnv_grch38.seg.v2.txt

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data/gdc_data_organized/805bfe39-3695-43c2-93e4-d66d0559b89f/CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G05_777660.grch38.seg.v2.txt

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+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	15	20376198	20376202	5	0.5593
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	15	20376309	22299523	113	-0.5139
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	15	22385639	24329610	957	0.0193
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	15	24329790	24469692	65	-0.25
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	15	24469711	31911598	4473	0.0194
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	15	31914963	31999586	73	-0.2373
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	15	32000184	48346517	10104	0.0035
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	15	48352968	48358721	8	-0.9213
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	15	48359135	54518628	3993	0.0036
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	15	54521799	54521815	2	-2.3711
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	15	54522666	101928837	31629	0.0024
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	16	10777	1184989	414	0.1292
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	16	1185314	21503767	13966	0.0195
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	16	21509217	21609085	34	0.424
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	16	21609226	22417324	345	0.0444
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	16	22420049	22708868	82	0.2812
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	16	22709045	71965858	21572	0.0093
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	16	71966296	71968040	3	-1.1865
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	16	71970500	74371293	1579	0.0029
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	16	74373114	74433062	12	0.6981
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	16	74433213	88542156	13150	0.0051
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	16	88542918	90096867	668	0.0943
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	150733	18414080	11379	0.013
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	18452078	18550123	25	-0.9887
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	18561272	27538562	1779	0.0171
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	27539524	27550676	6	-0.8472
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	27558497	36075579	5018	0.0086
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	36075798	36528105	137	0.2412
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	36528169	41266762	2447	0.0065
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	41266774	41274279	23	1.4067
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	41276472	41354660	75	-0.0065
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	41357204	41361537	6	0.5978
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	41361599	42857428	761	-0.0057
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	42859814	42865916	4	0.8692
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	42866050	45577724	1308	0.0185
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	45579014	45582060	6	-0.9915
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	45587327	46085732	337	0.105
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	46088437	46211164	100	-0.3537
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	46211213	46351954	26	-0.045
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	46446345	46446360	2	1.9312
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	17	46569894	83091923	21551	0.0053
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	18	48133	69076108	42501	0.0007
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	18	69078869	69084372	23	-0.7804
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	18	69084488	80257174	8182	-0.0066
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	19	90910	20410682	8916	0.0142
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	19	20411294	20583108	97	-0.4682
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	19	20583205	35364547	7683	0.0071
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	19	35365141	35375842	20	-0.4721
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	19	35375884	53025366	8981	0.0116
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	19	53025394	53043602	13	0.629
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	19	53044108	58586487	3374	0.0113
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	20	80664	26244509	19967	0.0093
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	20	26248044	30400790	75	0.2637
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	20	30406589	31976150	347	0
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	20	31976294	31977700	2	2.036
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	20	31977893	63588502	21640	0.0071
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	20	63589896	64261403	287	0.1188
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	20	64263027	64324800	25	-0.1651
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	21	10354168	10568903	54	-0.0004
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	21	10569525	10775586	33	-0.3851
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	21	12973348	46677045	23768	-0.0008
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	22	15294547	18392404	1129	-0.0107
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	22	18547989	19037293	63	0.5733
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	22	19037712	24015674	3219	0.0685
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	22	24020015	33777419	7226	0.0124
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	22	33778960	33778986	3	-2.3281
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	22	33778998	42514763	5503	0.0107
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	22	42517063	42577195	25	0.8049
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	22	42577696	50796027	6085	0.0151
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	X	251810	151124426	81236	0.0027
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	X	151125462	151126987	2	-1.9456
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	X	151128083	155952689	2360	0.0062
+8b23eb8b-977a-4c40-a71a-98dd5a9f8e38	Y	2782397	56872112	6635	-0.76

data/gdc_data_organized/805bfe39-3695-43c2-93e4-d66d0559b89f/TCGA-A2-A1FZ-01A-11-A17I-20_RPPA_data.tsv

@@ -0,0 +1,488 @@
+AGID	lab_id	catalog_number	set_id	peptide_target	protein_expression
+AGID00100	882	sc-628	Old	1433BETA	0.64916
+AGID00111	913	sc-23957	Old	1433EPSILON	0.338955
+AGID00101	883	sc-1019	Old	1433ZETA	-0.37825
+AGID00001	2	9452	Old	4EBP1	-0.299215
+AGID00002	3	9456	Old	4EBP1_pS65	-0.023113245
+AGID00003	6	9459	Old	4EBP1_pT37T46	-0.402165
+AGID00443	8	9455	Old	4EBP1_pT70	0.0561955
+AGID00120	985	4937	Old	53BP1	-0.911475
+AGID00004	13	3661	Old	ACC_pS79	-0.566465
+AGID00005	14	1768-1/ab45174	Old	ACC1	-1.3417
+AGID00408	2372	3658	Set163	AceCS1	-0.520750454496545
+AGID00473	1182	5335	Old	ACETYLATUBULINLYS40	-0.831175
+AGID00404	2367	9189	Set163	ACSL1	-0.157999985790483
+AGID02144	2450	PA5-27081	Old	ACVRL1	0.433595
+AGID00186	1198	ab88574	Old	ADAR1	-0.88223
+AGID00146	1084	4691	Old	AKT	-0.446355
+AGID00028	230	9271	Old	AKT_pS473	-0.485595
+AGID00170	1154	2965	Old	AKT_pT308	-0.1359175
+AGID00316	1800	3063	Set163	Akt2	-0.76103494443559
+AGID00347	2009	8599	Set163	Akt2_pS474	0.726779493309485
+AGID02215	2577	ab195377	Set163	ALKBH5	-1.4288951562267
+AGID00498	924	CA1030	Old	ALPHACATENIN	NA
+AGID00287	1630	ABC80	Set163	Ambra1_pS52	0.350014211311312
+AGID00236	1351	ab129081	Set163	AMPK-a2_pS345	0.159994960741878
+AGID00006	39	2532	Old	AMPKALPHA	-0.441725
+AGID00007	40	2535	Old	AMPKALPHA_pT172	-0.254341
+AGID00193	1208	610066	Old	ANNEXIN1	0.588735
+AGID00166	1142	610668	Old	ANNEXINVII	0.164145
+AGID00371	756	1852-1/ab52615	Old	AR	0.27897
+AGID00194	1217	4432	Old	ARAF	-0.46346
+AGID02191	2507	PA5-39728	Old	ARAF_pS299	0.2676355
+AGID00260	1053	sc-32761	Old	ARID1A	0.1488835
+AGID00264	1560	HPA029318	Old	ASNS	-0.49673
+AGID00276	1612	3415	Set163	Atg3	0.127169990642513
+AGID00309	1775	13507	Set163	Atg4B	0.661249536977747
+AGID00310	1776	12994	Set163	Atg5	-0.742880037360632
+AGID00277	1613	8558	Set163	Atg7	0.0661500537189052
+AGID00242	1363	2873	Old	ATM	-0.890435
+AGID02142	2447	13050	Set163	ATM_pS1981	0.547424910003508
+AGID00217	1289	ab14748	Set163	ATP5A	-0.0358705896602085
+AGID02145	2451	PA5-43776	Set163	ATP5H	1.60679503009125
+AGID02150	2456	13934	Set163	ATR	0.32486701877612
+AGID00315	1795	ab178407	Set163	ATR_pS428	-0.479936198754359
+AGID00268	1569	ab97508	Set163	ATRX	-0.959102584051068
+AGID00391	2332	14475	Set163	Aurora-A	0.0548100537189051
+AGID00392	2333	2914	Set163	Aurora-ABC_pT288_pT232_pT198	0.0885300636309101
+AGID02195	2512	MA5-27890	Set163	Aurora-B	0.280583747734711
+AGID00215	1271	8661	Old	AXL	0.61597
+AGID02143	2449	8457	Set163	b-Actin	0.226949787966294
+AGID00179	1170	9565	Set163	b-Catenin_pT41_S45	0.538935058787544
+AGID00301	1725	14058	Set163	B7-H3	0.271689139111399
+AGID00302	1726	14572	Set163	B7-H4	0.588664719006824
+AGID00008	63	9291	Old	BAD_pS112	-0.117998355
+AGID00009	71	1542-1/ab32371	Old	BAK	0.611155
+AGID00192	1207	sc-28383	Old	BAP1C4	-0.792915
+AGID00010	73	2772	Old	BAX	-0.165145
+AGID00433	80	M0887	Old	BCL2	0.62809
+AGID00219	1299	PAB8528	Old	BCL2A1	0.972765
+AGID00012	84	1018-1	Old	BCLXL	0.043216
+AGID00377	87	sc-10086	Old	BECLIN	0.651175
+AGID00011	75	9562	Old	BETACATENIN	-1.25035
+AGID00013	88	1008-1/ab32060	Old	BID	1.2573
+AGID00180	90	1036-1/ab32158	Old	BIM	-0.0867192
+AGID00221	1311	610978	Set163	BiP-GRP78	-0.236675502245709
+AGID00373	2194	07-507	Set163	BMK1-Erk5_pT218_Y220	-0.166019912631596
+AGID00355	92	1647/ab33899	Old	BRAF	-1.093265
+AGID00014	94	2696	Old	BRAF_pS445	-1.22116
+AGID00445	761	9012	Old	BRCA2	-0.1603
+AGID00266	1567	13440	Old	BRD4	-1.097895
+AGID00168	1146	2865	Set163	c-Abl_pY412	0.837009321755611
+AGID00278	1615	3130	Set163	c-IAP2	0.091494944938123
+AGID00345	1990	5649	Old	CA9	NA
+AGID00265	1565	2862	Old	CABL	0.149246
+AGID00429	2407	2679	Set163	Calnexin	-0.464620199765002
+AGID00176	1165	9496	Set163	Caspase-8-cleaved	0.460184971866889
+AGID00623	111	9665	Old	CASPASE3	-0.39958
+AGID00015	109	9491	Old	CASPASE7CLEAVEDD198	-0.3593964
+AGID00118	951	9746	Old	CASPASE8	0.790885
+AGID00537	935	551246	Old	CASPASE9	NA
+AGID00016	114	3238	Old	CAVEOLIN1	1.562
+AGID00358	2100	ab76000	Set163	CD134	1.05361861620145
+AGID00303	1737	826701	Set163	CD171	-0.039219968808377
+AGID00410	125	1632-1/ab78237	Old	CD20	0.75935
+AGID00220	1308	ab28340	Old	CD26	0.460105
+AGID00191	1206	610467	Set163	CD29	-0.0527902985384611
+AGID00017	127	M0823	Old	CD31	0.666375
+AGID00369	2174	ab108403	Set163	CD38	0.162300064532001
+AGID00359	2104	ab133616	Set163	CD4	0.577248795953043
+AGID00411	1398	3570	Set163	CD44	0.471894932357502
+AGID00237	1352	M070101-2	Set163	CD45	0.14182988840331
+AGID00115	937	611016	Old	CD49B	0.046439
+AGID02171	2482	91882	Set163	CD86	-0.159689956955561
+AGID00329	1873	4688	Set163	cdc25C	-0.331234934454271
+AGID00227	1332	4651	Set163	Cdc42	0.341059835377556
+AGID00422	2396	3387	Set163	Cdc6	0.241369938725792
+AGID00501	1007	9112	Old	CDK1	0.3666
+AGID00293	1658	ab32384	Set163	CDK1_pT14	-1.34432993900305
+AGID00314	1783	4539	Old	CDK1_pY15	-0.784335
+AGID00423	2397	8064	Set163	CDT1	0.937934607236862
+AGID02101	2348	15102	Set163	cGAS	-0.221009941706324
+AGID00447	2410	13460	Set163	CHD1L	-0.66140177577298
+AGID00189	1203	2360	Old	CHK1	0.550775
+AGID00234	1348	ab79758	Old	CHK1_pS296	0.402435
+AGID00107	903	2348	Old	CHK1_pS345	0.023985
+AGID00018	146	3440	Old	CHK2	-0.85924
+AGID00019	147	2197	Old	CHK2_pT68	0.39251
+AGID00527	2078	4952	Old	CIAP	-0.075572
+AGID00350	2018	3793	Set163	CIITA	0.224630057253956
+AGID00434	155	9164	Old	CJUN_pS73	0.450955
+AGID00020	157	1522-1/ab32363	Old	CKIT	0.94415
+AGID00400	852	NB100-91714	Old	CLAUDIN7	-0.745205
+AGID00466	726	3127	Old	CMET	1.0698
+AGID00079	727	3129	Old	CMET_pY1235	0.41891
+AGID00167	161	9402	Old	CMYC	1.9505
+AGID00292	1656	11130-1-AP	Old	COG3	-1.052795
+AGID00021	171	sc-20649	Old	COLLAGENVI	2.54685
+AGID00141	1069	459230	Old	COMPLEXIISUBUNIT30	NA
+AGID00267	1568	3512	Set163	Connexin-43	-0.604680212033706
+AGID00269	1571	6434	Set163	Coup-TFII	0.57105005496657
+AGID00150	1116	4850	Set163	Cox-IV	-0.838910599225637
+AGID00195	1218	4842	Set163	Cox2	0.376790060996951
+AGID00188	803	05-739	Old	CRAF	0.140857
+AGID00022	179	9427	Old	CRAF_pS338	0.270865
+AGID00023	181	9197	Set163	Creb	1.04408893643526
+AGID00393	2334	9198	Set163	CREB_pS133	-0.257937809037692
+AGID00365	2155	4980	Set163	CSK	-0.229849980591879
+AGID00367	2160	9201	Set163	CtIP	0.628564719006824
+AGID00536	2096	ab107198	Old	CTLA4	NA
+AGID00025	198	2936	Set163	Cyclin-D3	-0.158330061274208
+AGID00024	192	1495-1/ab32053	Old	CYCLINB1	-1.48105
+AGID00382	194	sc-718	Old	CYCLIND1	0.74285
+AGID00437	199	sc-25303	Old	CYCLINE1	-0.733965
+AGID00449	202	1142-1	Old	CYCLINE2	-0.20817
+AGID00209	1257	ab110324	Set163	Cyclophilin-F	-1.24557023095662
+AGID00247	1379	ab48389	Set163	D-a-Tubulin	0.233355048806225
+AGID00308	1770	GTX10524	Set163	DAPK1_pS308	-0.0673399970194675
+AGID00304	1744	ab51601	Set163	DAPK2	0.883964832544317
+AGID00343	1980	6998	Set163	DDB-1	-0.934400012615278
+AGID00427	2402	5583	Set163	DDR1	-0.301425714210051
+AGID00428	2403	SAB4504671	Set163	DDR1_pY513	-0.523929966659622
+AGID00532	1273	Bast Lab	Old	DIRAS3	0.97385
+AGID00104	891	ab76008	Old	DJ1	-0.0609127
+AGID02146	2452	4658	Set163	DM-Histone-H3	0.892524668788319
+AGID00386	1397	ab32521	Set163	DM-K9-Histone-H3	0.0202850231251218
+AGID00352	2030	14649	Set163	DNA-Ligase-IV	-0.0753751967411483
+AGID00407	2371	13609	Set163	DNA_POLG	-0.724310026339592
+AGID00399	2344	5032	Set163	DNMT1	-1.35368007860289
+AGID00409	2373	5391	Set163	DRP1	-0.85396151417944
+AGID00253	1406	5149	Old	DUSP4	-0.493
+AGID00334	1936	ab76310	Set163	DUSP6	-0.123700277536105
+AGID00116	940	3218	Old	DVL3	-0.54607
+AGID00211	1261	sc-251	Old	E2F1	NA
+AGID00148	1099	3195	Old	ECADHERIN	-1.00059
+AGID00135	1060	2332	Old	EEF2	-1.16985
+AGID00136	1061	3692	Old	EEF2K	-0.352303
+AGID00152	1120	2232	Old	EGFR	0.23181
+AGID00450	217	2234	Old	EGFR_pY1068	0.384615
+AGID00026	221	1124-1/ab32578	Old	EGFR_pY1173	1.451915
+AGID00078	722	9742	Old	EIF4E	-0.1195265
+AGID00328	1871	ab76256	Set163	eIF4E_pS209	0.452789736118892
+AGID00154	1124	2498	Old	EIF4G	-0.728495
+AGID00027	228	9181	Set163	Elk1_pS383	0.798645058787544
+AGID00235	1350	M061329-2	Set163	EMA	-0.991200373051769
+AGID00394	2337	3810	Set163	Enolase-1	-0.433815178961925
+AGID00395	2338	8171	Set163	Enolase-2	0.0923750643327216
+AGID00196	1219	GTX629542	Old	ENY2	-1.15067
+AGID00438	1849	A302-024A	Set163	EphA2	0.519140057253956
+AGID00552	2422	6347	Set163	EphA2_pS897	-0.0254399390030496
+AGID00553	2423	12677	Set163	EphA2_pY588	0.06229156089245
+AGID00075	693	556347	Old	EPPK1	-0.025155
+AGID00335	238	RM-9101	Old	ERALPHA	0.718045
+AGID00029	241	1091-1/ab32396	Old	ERALPHA_pS118	-0.21891
+AGID00240	247	MS-671	Old	ERCC1	0.82837
+AGID00239	1355	11331-1-AP	Old	ERCC5	-0.84003
+AGID00484	249	sc-154	Old	ERK2	-0.395355
+AGID00372	2193	3552	Set163	Erk5	-0.31142993636909
+AGID00405	2369	13826	Set163	ERRalpha	0.565624932357502
+AGID00187	1200	A303-501A	Old	ETS1	1.14518
+AGID00511	2492	2593	Set163	EVI1	0.378704452526449
+AGID00485	1284	4905	Old	EZH2	NA
+AGID00030	252	1700-1/ab40794	Set163	FAK	1.49544005240193
+AGID02151	2457	8556	Set163	FAK_pY397	0.0410334486072476
+AGID00171	1156	3180	Old	FASN	-1.27385
+AGID00356	2085	500-P18/10775-082	Set163	FGF-basic	0.46187505556441
+AGID00031	262	1574-1/ab45688	Old	FIBRONECTIN	1.46175
+AGID00339	1959	4403	Set163	FN14	-0.116704938613154
+AGID02152	2458	20459	Old	FOXM1	0.301455
+AGID00378	269	9467	Old	FOXO3A	0.380525
+AGID02197	2515	orb6051	Old	FOXO3A_pS318S321	0.413965
+AGID02167	2475	PA5-64616	Set163	FRS2-alpha_pY196	0.339660065502407
+AGID02213	2575	ab124892	Set163	FTO	-0.912809939834826
+AGID02141	2446	12263	Old	G6PD	-0.0230565
+AGID00117	943	3239	Old	GAB2	0.102848
+AGID00412	274	AM4300	Old	GAPDH	-2.8322
+AGID00086	764	558686	Old	GATA3	0.775645
+AGID00383	1578	4253	Old	GATA6	0.27055
+AGID00289	1634	12601-1-AP	Set163	GCLC	0.147945036433548
+AGID00305	1745	ab124827	Set163	GCLM	0.52044005614492
+AGID00212	1263	3305	Old	GCN5L2	-1.4457
+AGID00270	1579	3538	Set163	Gli1	-1.23078034241467
+AGID00263	1520	ab69838	Set163	Gli3	0.75696891127403
+AGID00548	2530	3660	Set163	Glucocorticoid-Receptor	-0.23953494693092
+AGID00387	1617	12793	Set163	Glutamate-D1-2	-0.703031076110698
+AGID00262	1491	ab156876	Set163	Glutaminase	0.288169996950152
+AGID00319	1807	4275	Set163	Granzyme-B	-0.306975039258122
+AGID00368	2169	ab183737	Set163	GRB7	-0.334360719417318
+AGID00396	2339	3593	Set163	Grp75	-0.689355007754584
+AGID00174	1163	9315	Set163	GSK-3B	-0.871040817290368
+AGID00502	1082	9336	Old	GSK3_pS9	-0.445995
+AGID00033	284	sc-7291	Old	GSK3ALPHABETA	-0.7907
+AGID00034	285	9331	Old	GSK3ALPHABETA_pS21S9	-0.71181
+AGID00129	1035	3886	Old	GYS	NA
+AGID00130	1036	3891	Old	GYS_pS641	NA
+AGID01354	1342	9718	Set163	H2AX_pS139	0.0246800168434759
+AGID00363	1409	MA1-2022	Set163	H2AX_pS140	-0.208425004600765
+AGID00131	1038	MS-325-P1	Old	HER2	0.3880895
+AGID00142	299	06-229	Old	HER2_pY1248	0.73381
+AGID00110	911	sc-285	Old	HER3	-0.392135
+AGID00080	728	4791	Old	HER3_pY1289	0.390565
+AGID00103	890	2573	Old	HEREGULIN	0.243505
+AGID00271	1582	11988	Set163	HES1	-0.406510176059372
+AGID00397	2340	2024	Set163	Hexokinase-I	-0.329110187773557
+AGID00442	1023	2867	Set163	Hexokinase-II	-1.20080149941542
+AGID00419	1402	610958	Old	HIF1ALPHA	NA
+AGID00205	1250	ab1791	Set163	Histone-H3	-0.909090116587349
+AGID00398	2341	3377	Set163	Histone-H3_pS10	-0.321845071974667
+AGID00332	1901	ab128959	Set163	HLA-DQA1	-0.523801313790728
+AGID00333	1902	14832-1-AP	Set163	HMHA1	0.346889562346927
+AGID00035	321	2402	Set163	HSP27	0.0855450014989304
+AGID00036	323	2401	Set163	HSP27_pS82	-0.515999950439978
+AGID00320	1808	12165	Set163	HSP60	-0.158385161806534
+AGID00037	325	4872	Old	HSP70	3.32365
+AGID00366	2158	86630	Set163	IDO	-0.0353054334855258
+AGID00197	1221	3024	Old	IGF1R_pY1135Y1136	0.80151
+AGID00038	335	3922	Old	IGFBP2	0.455725
+AGID00090	793	611504	Set163	IGFBP3	-0.116920263881108
+AGID00039	336	3027	Set163	IGFRb	-0.0348499369236077
+AGID00336	1949	12153	Set163	IL-6	0.867754732731136
+AGID02221	2583	57145	Set163	IMP3	0.0327899168916571
+AGID02153	2459	14543	Old	INPP4B	0.739835
+AGID00272	1586	3025	Set163	IR-b	-0.69639997809655
+AGID00519	2519	4302	Set163	IRF-3	-0.453874691838722
+AGID00520	2520	4947	Set163	IRF-3_pS396	-0.403430480281614
+AGID00223	1316	sc-497	Old	IRF1	0.073994
+AGID00092	802	06-248	Old	IRS1	0.53356
+AGID00040	371	4502	Set163	IRS2	0.0485495952020965
+AGID00250	1394	sc-13157	Old	JAB1	0.2316255
+AGID00256	1413	ab109536	Set163	Jagged1	0.426705586459277
+AGID00177	1166	3230	Old	JAK2	-0.54096
+AGID00758	377	4671	Old	JNK_pT183Y185	0.25891
+AGID02136	2439	PA5-28262	Old	JNK2	-0.151955
+AGID00307	1757	ab10484	Set163	KAP1	-0.393975450259684
+AGID00528	904	2180	Old	KU80	-1.008905
+AGID00375	2237	HPA028732	Set163	LAD1	-0.955804934974132
+AGID00290	1643	IHC-00439	Set163	Lasu1	-0.772004963566453
+AGID00279	1618	4108	Set163	LC3A-B	-0.0655352089405368
+AGID00042	397	2752	Old	LCK	0.35177
+AGID00119	976	3582	Old	LDHA	NA
+AGID00533	977	ab85319	Old	LDHB	NA
+AGID00529	1477	3050	Old	LKB1	0.61636
+AGID00244	1367	2568	Set163	LRP6_pS1490	-0.0914849615909831
+AGID00439	2424	2796	Set163	Lyn	0.00513500149893066
+AGID02154	2460	4370	Old	MAPK_pT202Y204	0.506695
+AGID00198	1222	5453	Set163	Mcl-1	-0.519100989744603
+AGID00288	1633	AB3314P	Set163	MCT4	-0.491260074166745
+AGID00175	1164	3521	Set163	MDM2_pS166	-0.184674937885349
+AGID00044	417	1235-1/ab32576	Old	MEK1	0.631225
+AGID00143	1076	9154	Old	MEK1_pS217S221	0.55048
+AGID00201	1243	9125	Set163	MEK2	-0.127160412907724
+AGID00361	2118	ab51061	Set163	MelanA	0.229555038409017
+AGID00362	2119	ab137078	Set163	Melanoma-gp100	0.702979958827059
+AGID00337	1951	12711	Set163	MERIT40	-0.832595575442031
+AGID00338	1952	12110	Set163	MERIT40_pS29	-0.154059935883887
+AGID02212	2574	ab195352	Set163	METTL3	-0.741989943855079
+AGID00225	1323	sc-20121	Set163	MIF	-0.215669938240588
+AGID00137	1062	WH0054206M1	Old	MIG6	-0.008339
+AGID00403	2117	ab20663	Set163	MITF	0.461604671853659
+AGID00503	1067	ab3298	Old	MITOCHONDRIA	NA
+AGID00321	1809	14739	Set163	Mitofusin-1	-0.621038731511195
+AGID00322	1810	11925	Set163	Mitofusin-2	-0.598680065502406
+AGID00389	2324	3515	Set163	MLH1	-0.978890083108343
+AGID00312	1780	14993	Set163	MLKL	-0.2640200923272
+AGID00402	2359	MAB3328	Set163	MMP14	0
+AGID00045	435	4022	Set163	MMP2	0.89513720093495
+AGID00122	1005	2195	Set163	Mnk1	0.00339884715795116
+AGID00331	1899	sc-377312	Set163	MR1	1.2456148757967
+AGID00273	1589	ab103319	Set163	MRAP	0.0505600653637779
+AGID00530	440	4847	Old	MRE11	0.806415
+AGID00390	905	2850	Old	MSH2	-0.41922
+AGID00138	1063	22030002	Old	MSH6	-1.03724
+AGID00299	1675	ab76148	Set163	MSI2	0.071445065441757
+AGID00232	1344	ab14705	Set163	MTCO1	-1.60458161946842
+AGID00046	444	2983	Old	MTOR	-1.025275
+AGID00047	446	2971	Old	MTOR_pS2448	-0.09567
+AGID00204	1247	H00009788-M01A	Set163	MTSS1	-0.0644151140833551
+AGID00401	1139	21370002	Old	MYH11	1.86265
+AGID00291	1647	3403	Old	MYOSINIIA	-0.38634
+AGID00173	1160	5026	Old	MYOSINIIA_pS1943	-0.336585
+AGID00318	1803	4282	Set163	Myt1	-0.307640193734623
+AGID00216	1274	5795-1/ab129189	Old	NAPSINA	NA
+AGID00418	452	4061	Old	NCADHERIN	0.99125
+AGID00156	1126	3217	Old	NDRG1_pT346	0.61783
+AGID02133	2436	PA5-45913	Set163	NDUFB4	0.520020063076392
+AGID00134	1046	22710002	Old	NF2	-0.545555
+AGID00048	457	3033	Old	NFKBP65_pS536	0.1241215
+AGID02155	2461	3608	Old	NOTCH1	0.4663
+AGID00340	1969	4147	Set163	Notch1-cleaved	0.626864815180982
+AGID00087	767	sc-5593	Set163	Notch3	0.250440037429946
+AGID00258	1420	3187	Set163	NQO1	-0.993535124203304
+AGID00162	1136	sc-31	Old	NRAS	0.623345
+AGID00257	1419	12721	Old	NRF2	NA
+AGID00297	1669	2750	Set163	Oct-4	0.468035051717443
+AGID00420	466	1712-1/ab40803	Old	P16INK4A	-0.7877
+AGID00384	470	sc-6246	Old	P21	0.49679
+AGID00105	897	1591-1/ab32034	Old	P27	0.35277
+AGID00096	842	AF1555	Old	P27_pT157	0.405275
+AGID00099	878	ab64949	Old	P27_pT198	0.38328
+AGID00181	1175	9228	Set163	p38-a	-0.0643310510880977
+AGID00098	479	9211	Old	P38_pT180Y182	0.0335065
+AGID00049	478	9212	Old	P38MAPK	-0.092353
+AGID00151	1119	4695	Set163	p44-42-MAPK	-0.166044949703509
+AGID00050	481	9282	Old	P53	0.31527
+AGID00490	1187	610833	Old	P62LCKLIGAND	-0.52644
+AGID00545	1415	ab53039	Old	P63	NA
+AGID00052	494	9205	Old	P70S6K_pT389	0.233495
+AGID00051	493	1494-1/ab32529	Old	P70S6K1	-0.444355
+AGID00085	759	9347	Old	P90RSK	-0.30717
+AGID00531	770	9344	Old	P90RSK_pT359S363	0.50838
+AGID00182	1178	9346	Set163	p90RSK_pT573	-0.202060061274209
+AGID00053	499	612024	Old	PAI1	0.72604
+AGID00224	1322	HPA035895	Set163	PAICS	-1.51684993636909
+AGID00323	1811	2602	Set163	PAK1	-0.923110365288523
+AGID02199	2517	PA5-69540	Set163	PAK4	-0.250775051006966
+AGID00245	1370	4336-BPC-100	Set163	PAR	-2.2156603967574
+AGID00374	2209	66564	Set163	PARG	0.323259787966294
+AGID00370	1372	sc-7150	Old	PARP1	NA
+AGID00468	501	9546	Old	PARPCLEAVED	0.411615
+AGID00274	1591	ab53715	Set163	Patched	0.137560026686166
+AGID00513	2486	60433	Set163	PAX6	0.418949958827059
+AGID00441	1621	9857	Set163	PAX8	-0.325356320713531
+AGID00054	504	2542	Old	PAXILLIN	0.33574
+AGID00055	509	2130	Old	PCADHERIN	0.456015
+AGID00248	511	ab29	Old	PCNA	-0.35577
+AGID00413	2095	43248	Old	PDCD1	NA
+AGID00094	816	600-401-965	Old	PDCD4	-0.528955
+AGID00385	1225	3169	Set163	PDGFRB	0.743455051717443
+AGID00210	1258	ab110332	Set163	PDH	0.319103904940401
+AGID00324	1817	3205	Set163	PDHA1	0.0897543862962559
+AGID00280	1622	3820	Set163	PDHK1	0.34965005496657
+AGID00056	515	3062	Old	PDK1	0.0702835
+AGID00057	516	3061	Old	PDK1_pS241	-0.388085
+AGID00300	1234	sc-19090	Old	PDL1	0.040045
+AGID00124	1017	2780	Old	PEA15	0.1682205
+AGID00125	1018	44-836G	Old	PEA15_pS116	0.427855
+AGID00440	2429	3192	Set163	PERK	-0.317430552091642
+AGID02207	2569	ab192876	Set163	PGM1	0.0894894103397916
+AGID00281	1623	13428	Set163	PHGDH	-0.563010561379812
+AGID00425	2399	22789-1-AP	Set163	PHLPP	0.21323006245256
+AGID00226	1330	sc-376412	Set163	PI3K-p110-b	0.166710051015631
+AGID00093	808	4255	Old	PI3KP110ALPHA	-0.08412625
+AGID00058	523	06-195	Old	PI3KP85	-0.072026
+AGID00296	1667	5675	Set163	PKA-a	-0.144675080846951
+AGID00259	1426	9375	Set163	PKC-a-b-II_pT638_T641	0.186470058293676
+AGID00172	529	05-154	Old	PKCALPHA	-0.34066
+AGID00460	530	06-822	Old	PKCALPHA_pS657	0.002425
+AGID00114	932	07-875	Old	PKCDELTA_pS664	0.1099895
+AGID00163	1137	9371	Old	PKCPANBETAII_pS660	-0.73617
+AGID00126	1025	4053	Old	PKM2	NA
+AGID00512	2489	5690	Set163	PLC-gamma1	-0.82373077194296
+AGID02138	2441	GTX133463	Set163	PLC-gamma2_pY759	0.333184895759334
+AGID00084	754	4513	Set163	PLK1	-0.73984000616901
+AGID00203	1246	22510002	Set163	PMS2	-0.783429941706323
+AGID00207	1254	ab14734	Set163	Porin	0.989730064532001
+AGID00381	549	1483-1/ab32085	Old	PR	0.267558
+AGID00081	738	AHO1031	Set163	PRAS40	0.0926100653637779
+AGID00082	739	44-1100G	Old	PRAS40_pT246	-0.0197185
+AGID00424	2398	OAAF05458	Set163	PRC1_pT481	0.275920039370759
+AGID00492	1205	HPA007730	Old	PRDX1	0.03599
+AGID00190	1204	ab102739	Old	PREX1	-0.19612
+AGID00061	566	9552	Old	PTEN	-0.49358
+AGID00364	2154	ab76942	Set163	PTPN12	-0.184370097040601
+AGID00218	1290	4976	Set163	Puma	-0.234824934419614
+AGID00200	1242	SAB2900066	Old	PYGB	NA
+AGID00535	1494	ab61013	Old	PYGL	NA
+AGID00202	1245	H00005837-M10	Old	PYGM	NA
+AGID00275	1607	3291	Set163	Pyk2_pY402	0.109664479871098
+AGID00145	1083	3539	Old	RAB11	1.9533
+AGID00169	1150	4314	Old	RAB25	-0.465185
+AGID00342	1979	24555	Set163	Rad23A	-0.988505021063009
+AGID00261	987	05-525	Old	RAD50	-0.26585
+AGID00360	579	NA71	Old	RAD51	0.536595
+AGID00158	1128	2280	Old	RAPTOR	-0.167035
+AGID00059	552	9309	Old	RB	0.95699
+AGID00060	557	9308	Old	RB_pS807S811	-0.78336
+AGID00164	1138	21390002	Old	RBM15	-1.90265
+AGID00547	735	3221	Old	RET_pY905	NA
+AGID00097	847	MAB3426	Set163	Rheb	0.171859970056043
+AGID00159	1129	2114	Old	RICTOR	-0.391495
+AGID00160	1130	3806	Old	RICTOR_pT1135	0.90324
+AGID00282	1624	4926	Set163	RIP	-0.557624979335551
+AGID00283	1625	13526	Set163	RIP3	0.30378931156635
+AGID00416	1368	2208	Set163	RPA32	-0.705424965611236
+AGID00246	1375	A300-245A	Set163	RPA32_pS4_S8	-0.25064103868077
+AGID00341	1978	3388	Set163	RRM1	0.1715348437733
+AGID00344	1981	PA5-27856	Set163	RRM2	-0.0283865966205715
+AGID00554	2425	8408	Set163	RSK1	-0.934257789109736
+AGID00353	2031	13018	Set163	S100A4	0.427595054351402
+AGID00330	1874	2317	Old	S6	-2.10935
+AGID00062	600	2211	Old	S6_pS235S236	-1.01757
+AGID00063	601	2215	Old	S6_pS240S244	-0.76646
+AGID00157	1127	sc-58420	Old	SCD1	0.0782655
+AGID00230	1339	11998	Set163	SDHA	0.276600057253956
+AGID00294	1039	ab69836	Old	SETD2	0.635065
+AGID00161	1131	32-4500	Old	SF2	0.064205
+AGID02179	2495	3534	Set163	SFRP1	0.469414028320537
+AGID00431	2411	12103	Set163	SGK1	0.84529932175561
+AGID00430	2409	8156	Set163	SGK3	0.470505018134462
+AGID02168	2476	bs-3413R	Old	SHC_pY317	0.30412
+AGID00376	2241	3397	Set163	SHP2	0.504009806265377
+AGID00183	1180	3751	Old	SHP2_pY542	-0.367355
+AGID02208	2570	ab8120	Set163	SIRP-alpha	0.320504395965656
+AGID00222	1133	sc-99002	Old	SLC1A5	-1.08583
+AGID00255	1411	sc-136891	Set163	Slfn11	0.870539970056043
+AGID00064	610	2954	Old	SMAC	-1.032515
+AGID00113	922	1649-1/ab33902	Old	SMAD1	-0.1295615
+AGID00091	796	1735-1/ab40854	Old	SMAD3	-0.020042
+AGID02160	2467	46535	Old	SMAD4	0.297525
+AGID00065	616	3895	Old	SNAIL	0.679265
+AGID00325	1818	4266	Set163	SOD1	0.113608573364986
+AGID00380	1328	13141	Set163	SOD2	0.576034832544317
+AGID00298	1670	2748	Set163	Sox2	0.438159852013086
+AGID00066	621	05-184	Old	SRC	-0.2864365
+AGID02157	2463	6943	Old	SRC_pY416	0.327025
+AGID00068	626	2105	Old	SRC_pY527	0.2971185
+AGID00185	1197	4904	Set163	Stat3	-0.928203105782249
+AGID00388	637	9131	Old	STAT3_pY705	0.284754865
+AGID00069	638	1289-1/ab32043	Old	STAT5ALPHA	0.176314
+AGID00077	718	1972-1/ab52630	Old	STATHMIN	0.71298
+AGID00357	2099	13647	Set163	STING	-0.215624935286047
+AGID00128	1033	sc-1240	Old	SYK	-0.60399
+AGID00070	646	05-348	Set163	Tau	0.279935036433548
+AGID00327	777	2149	Old	TAZ	0.671935
+AGID00228	1333	7495	Set163	TFAM	-0.613626265816309
+AGID00165	1140	22500002	Old	TFRC	-1.4389
+AGID00149	1107	S1711/ab137573	Old	TIGAR	0.25688
+AGID00109	908	MS-224-P1	Old	TRANSGLUTAMINASE	-0.240505
+AGID00406	2370	612344	Set163	TRAP1	-1.73899994170632
+AGID00559	2537	PA5-34561	Set163	TRIM24	-0.384617188013211
+AGID00306	1756	ab167154	Set163	TRIM25	-1.02915565307449
+AGID00426	2400	PA5-52193	Set163	TRIP13	-0.243694934974132
+AGID00155	1125	4906	Old	TSC1	-0.3984
+AGID00144	1081	2044-1/ab76013	Old	TTF1	NA
+AGID00071	670	1613-1/ab32554	Old	TUBERIN	-0.444515
+AGID02194	2511	ab109403	Old	TUBERIN_pT1462	0.489175
+AGID00417	1842	ab173300	Set163	TUFM	-0.180169966659622
+AGID00238	1353	sc-81417	Set163	Twist	0.310080059264082
+AGID00436	1080	5585	Set163	Tyro3	0.633559519718386
+AGID00295	1662	5546	Set163	U-Histone-H2B	-0.316915114083355
+AGID00214	1270	HPA005651	Set163	UBAC1	-0.299285076376152
+AGID00351	2020	sc-136145	Set163	UBQLN4	0.347320048035098
+AGID00213	1267	sc-271268	Set163	UGT1A	0.038115061386846
+AGID00284	1626	6888	Set163	ULK1_pS757	0.0410421508984546
+AGID00208	1256	MS304/ab14745	Set163	UQCRC2	-0.27923996458018
+AGID00313	1781	13115	Set163	UVRAG	0.42606005496657
+AGID00073	678	3112	Set163	VASP	-0.339530305677876
+AGID00184	1181	2502	Set163	VAV1	0.14406416722717
+AGID00074	688	2479	Old	VEGFR2	-0.324155
+AGID00421	2394	68547	Set163	VHL	-0.0677599407359173
+AGID00231	1343	SAB4200080	Set163	Vinculin	0.0365896424054097
+AGID00317	1802	4936	Set163	Wee1	-0.918066146352462
+AGID00354	2058	4910	Set163	Wee1_pS642	0.486359812226443
+AGID00285	1627	12124	Set163	WIPI1	-0.0271099606292412
+AGID00286	1628	8567	Set163	WIPI2	-0.159154934419614
+AGID02214	2576	ab195380	Set163	WTAP	-1.3584606480925
+AGID00133	1044	sc-32136	Old	XBP1	0.844095
+AGID00076	699	2042	Set163	XIAP	0.257279528382724
+AGID00241	1359	sc-56813	Set163	XPA	1.53034506433272
+AGID00349	1354	ab3299	Set163	XPF	0.674437435079771
+AGID02137	2440	PA5-29359	Old	XRCC1	-0.25366
+AGID00088	780	sc-15407	Old	YAP	0.435685
+AGID00089	782	4911	Old	YAP_pS127	0.268215
+AGID00504	700	17250002	Old	YB1	0.65937
+AGID00095	835	2900	Old	YB1_pS102	0.215847
+AGID02217	2579	ab220163	Set163	YTHDF2	-1.60730496561124
+AGID02210	2572	ab220161	Set163	YTHDF3	-1.40532998579048
+AGID00326	1828	2705	Set163	ZAP-70	0.154002899496531
+AGID00432	2244	sc-25388	Set163	ZEB1	0.841888334368016

data/gdc_data_organized/805bfe39-3695-43c2-93e4-d66d0559b89f/TCGA-A2-A1FZ-01A-21D-A896-36.WholeGenome.RP-1657.cr.igv.reheader.seg.txt

@@ -0,0 +1,174 @@
+GDC_Aliquot_ID	Chromosome	Start	End	Num_Probes	Segment_Mean
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	17001	1689000	881	-0.011632
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	1689001	1742000	28	-0.961615
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	1742001	2652000	899	-0.004345
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	2652001	2757000	11	-0.793660
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	2775001	16583000	13339	-0.007207
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	16583001	16632000	41	-0.315031
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	16632001	16949000	177	-0.264108
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	16949001	103594000	85977	-0.006140
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	103611001	103718000	9	-1.001239
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	103760001	123434000	16404	-0.005400
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	123435001	124783000	214	-0.173090
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	124802001	161571000	14275	0.185824
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	161571001	161650000	48	0.797994
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	161654001	196757000	34856	0.183090
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	196760001	196766000	3	-3.119266
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	196766001	196836000	9	-9.129652
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	196844001	197254000	402	0.173195
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	197254001	246195000	48169	0.180527
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	246195001	248435000	2188	0.180931
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	248436001	248483000	32	0.561293
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	248485001	248650000	81	-0.535360
+TCGA-A2-A1FZ-01A-21D-A896-36	chr1	248659001	248931000	268	0.169137
+TCGA-A2-A1FZ-01A-21D-A896-36	chr2	11001	52176000	51796	-0.006933
+TCGA-A2-A1FZ-01A-21D-A896-36	chr2	52176001	52357000	181	-1.007097
+TCGA-A2-A1FZ-01A-21D-A896-36	chr2	52357001	242159000	180919	-0.005732
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	12001	19112000	18990	0.177343
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	19112001	73061000	53688	-0.110764
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	73061001	75326000	2257	0.173452
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	75326001	75519000	193	0.214301
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	75519001	75866000	321	-0.078291
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	75866001	79312000	3426	-0.113837
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	79312001	89239000	9888	0.178851
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	89239001	93471000	1683	-0.107104
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	93714001	96338000	2613	0.178389
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	96338001	183725000	86655	0.180109
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	183725001	195615000	11766	0.179692
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	195615001	195786000	139	0.570838
+TCGA-A2-A1FZ-01A-21D-A896-36	chr3	195786001	198175000	2310	0.179931
+TCGA-A2-A1FZ-01A-21D-A896-36	chr4	15001	8975000	8777	-0.009632
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+TCGA-A2-A1FZ-01A-21D-A896-36	chr4	8999001	35238000	25791	-0.006694
+TCGA-A2-A1FZ-01A-21D-A896-36	chr4	35238001	35244000	6	-0.339397
+TCGA-A2-A1FZ-01A-21D-A896-36	chr4	35244001	49092000	13790	-0.005998
+TCGA-A2-A1FZ-01A-21D-A896-36	chr4	49092001	49114000	21	-0.068860
+TCGA-A2-A1FZ-01A-21D-A896-36	chr4	49114001	50663000	279	-0.058174
+TCGA-A2-A1FZ-01A-21D-A896-36	chr4	50679001	190204000	136891	-0.004932
+TCGA-A2-A1FZ-01A-21D-A896-36	chr5	13001	181474000	173942	-0.006173
+TCGA-A2-A1FZ-01A-21D-A896-36	chr6	148001	265000	117	-0.016521
+TCGA-A2-A1FZ-01A-21D-A896-36	chr6	265001	382000	117	0.122528
+TCGA-A2-A1FZ-01A-21D-A896-36	chr6	382001	170612000	166815	-0.005396
+TCGA-A2-A1FZ-01A-21D-A896-36	chr7	35001	65815000	60531	-0.008078
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+TCGA-A2-A1FZ-01A-21D-A896-36	chr7	65824001	102476000	35243	-0.008173
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+TCGA-A2-A1FZ-01A-21D-A896-36	chr9	10001	25546000	25263	-0.007736
+TCGA-A2-A1FZ-01A-21D-A896-36	chr9	25546001	25602000	56	-1.016923
+TCGA-A2-A1FZ-01A-21D-A896-36	chr9	25602001	40922000	13429	-0.006181
+TCGA-A2-A1FZ-01A-21D-A896-36	chr9	40922001	41120000	181	0.070698
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+TCGA-A2-A1FZ-01A-21D-A896-36	chr10	42066001	42086000	18	1.094579
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+TCGA-A2-A1FZ-01A-21D-A896-36	chr11	179001	90013000	84724	-0.007711
+TCGA-A2-A1FZ-01A-21D-A896-36	chr11	90071001	90096000	7	-0.452536
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+TCGA-A2-A1FZ-01A-21D-A896-36	chr12	12001	8209000	8103	-0.008255
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+TCGA-A2-A1FZ-01A-21D-A896-36	chr15	17000001	20237000	361	0.028598
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data/gdc_data_organized/805bfe39-3695-43c2-93e4-d66d0559b89f/edd93086-8a98-471b-904d-9ac725a9a386.mirbase21.mirnas.quantification.txt

@@ -0,0 +1,1882 @@
+miRNA_ID	read_count	reads_per_million_miRNA_mapped	cross-mapped
+hsa-let-7a-1	30679	9198.383334	N
+hsa-let-7a-2	30841	9246.955260	Y
+hsa-let-7a-3	31061	9312.917134	N
+hsa-let-7b	118085	35405.035889	N
+hsa-let-7c	11623	3484.885736	Y
+hsa-let-7d	2283	684.504356	N
+hsa-let-7e	3441	1031.703675	N
+hsa-let-7f-1	6505	1950.372685	N
+hsa-let-7f-2	6517	1953.970605	N
+hsa-let-7g	1207	361.890827	N
+hsa-let-7i	1714	513.902964	N
+hsa-mir-1-1	4	1.199307	N
+hsa-mir-1-2	1	0.299827	N
+hsa-mir-100	13242	3970.305164	Y
+hsa-mir-101-1	14223	4264.435156	N
+hsa-mir-101-2	14073	4219.461151	N
+hsa-mir-103a-1	33496	10042.995149	Y
+hsa-mir-103a-2	33787	10130.244719	Y
+hsa-mir-103b-1	0	0.000000	N
+hsa-mir-103b-2	0	0.000000	N
+hsa-mir-105-1	2	0.599653	N
+hsa-mir-105-2	0	0.000000	N
+hsa-mir-106a	24	7.195841	Y
+hsa-mir-106b	1662	498.311976	N
+hsa-mir-107	187	56.067593	Y
+hsa-mir-10a	96937	29064.300834	N
+hsa-mir-10b	340431	102070.303365	N
+hsa-mir-1178	0	0.000000	N
+hsa-mir-1179	0	0.000000	N
+hsa-mir-1180	53	15.890815	N
+hsa-mir-1181	3	0.899480	N
+hsa-mir-1182	0	0.000000	N
+hsa-mir-1183	0	0.000000	N
+hsa-mir-1184-1	0	0.000000	N
+hsa-mir-1184-2	0	0.000000	N
+hsa-mir-1184-3	0	0.000000	N
+hsa-mir-1185-1	3	0.899480	N
+hsa-mir-1185-2	1	0.299827	N
+hsa-mir-1193	0	0.000000	N
+hsa-mir-1197	0	0.000000	N
+hsa-mir-1199	0	0.000000	N
+hsa-mir-1200	0	0.000000	N
+hsa-mir-1202	0	0.000000	N
+hsa-mir-1203	0	0.000000	N
+hsa-mir-1204	0	0.000000	N
+hsa-mir-1205	0	0.000000	N
+hsa-mir-1206	0	0.000000	N
+hsa-mir-1207	0	0.000000	N
+hsa-mir-1208	0	0.000000	N
+hsa-mir-122	1	0.299827	N
+hsa-mir-1224	2	0.599653	N
+hsa-mir-1225	0	0.000000	N
+hsa-mir-1226	2	0.599653	N
+hsa-mir-1227	0	0.000000	N
+hsa-mir-1228	19	5.696707	N
+hsa-mir-1229	2	0.599653	N
+hsa-mir-1231	0	0.000000	N
+hsa-mir-1233-1	0	0.000000	N
+hsa-mir-1233-2	0	0.000000	N
+hsa-mir-1234	0	0.000000	N
+hsa-mir-1236	0	0.000000	N
+hsa-mir-1237	0	0.000000	N
+hsa-mir-1238	0	0.000000	N
+hsa-mir-124-1	0	0.000000	N
+hsa-mir-124-2	0	0.000000	N
+hsa-mir-124-3	0	0.000000	N
+hsa-mir-1243	0	0.000000	N
+hsa-mir-1244-1	0	0.000000	N
+hsa-mir-1244-2	0	0.000000	N
+hsa-mir-1244-3	0	0.000000	N
+hsa-mir-1244-4	0	0.000000	N
+hsa-mir-1245a	20	5.996534	N
+hsa-mir-1245b	0	0.000000	N
+hsa-mir-1246	0	0.000000	N
+hsa-mir-1247	72	21.587522	N
+hsa-mir-1248	1	0.299827	N
+hsa-mir-1249	12	3.597920	N
+hsa-mir-1250	3	0.899480	N
+hsa-mir-1251	1	0.299827	N
+hsa-mir-1252	0	0.000000	N
+hsa-mir-1253	0	0.000000	N
+hsa-mir-1254-1	0	0.000000	N
+hsa-mir-1254-2	0	0.000000	N
+hsa-mir-1255a	0	0.000000	N
+hsa-mir-1255b-1	0	0.000000	N
+hsa-mir-1255b-2	0	0.000000	N
+hsa-mir-1256	0	0.000000	N
+hsa-mir-1257	0	0.000000	N
+hsa-mir-1258	5	1.499134	N
+hsa-mir-125a	4175	1251.776473	N
+hsa-mir-125b-1	1976	592.457560	N
+hsa-mir-125b-2	1963	588.559812	N
+hsa-mir-126	19423	5823.533997	N
+hsa-mir-1260a	0	0.000000	N
+hsa-mir-1260b	0	0.000000	N
+hsa-mir-1261	0	0.000000	N
+hsa-mir-1262	2	0.599653	N
+hsa-mir-1263	0	0.000000	N
+hsa-mir-1264	0	0.000000	N
+hsa-mir-1265	0	0.000000	N
+hsa-mir-1266	74	22.187176	N
+hsa-mir-1267	0	0.000000	N
+hsa-mir-1268a	0	0.000000	N
+hsa-mir-1268b	0	0.000000	N
+hsa-mir-1269a	0	0.000000	N
+hsa-mir-1269b	0	0.000000	N
+hsa-mir-127	3165	948.951506	N
+hsa-mir-1270	13	3.897747	N
+hsa-mir-1271	30	8.994801	N
+hsa-mir-1272	0	0.000000	N
+hsa-mir-1273a	0	0.000000	N
+hsa-mir-1273c	0	0.000000	N
+hsa-mir-1273d	0	0.000000	N
+hsa-mir-1273e	0	0.000000	N
+hsa-mir-1273f	0	0.000000	N
+hsa-mir-1273g	0	0.000000	N
+hsa-mir-1273h	0	0.000000	N
+hsa-mir-1275	0	0.000000	N
+hsa-mir-1276	0	0.000000	N
+hsa-mir-1277	4	1.199307	N
+hsa-mir-1278	0	0.000000	N
+hsa-mir-1279	0	0.000000	N
+hsa-mir-128-1	213	63.863087	N
+hsa-mir-128-2	127	38.077991	N
+hsa-mir-1281	0	0.000000	N
+hsa-mir-1282	0	0.000000	N
+hsa-mir-1283-1	0	0.000000	N
+hsa-mir-1283-2	0	0.000000	N
+hsa-mir-1284	1	0.299827	N
+hsa-mir-1285-1	0	0.000000	N
+hsa-mir-1285-2	0	0.000000	N
+hsa-mir-1286	0	0.000000	N
+hsa-mir-1287	274	82.152516	N
+hsa-mir-1288	2	0.599653	N
+hsa-mir-1289-1	0	0.000000	N
+hsa-mir-1289-2	0	0.000000	N
+hsa-mir-129-1	2	0.599653	N
+hsa-mir-129-2	2	0.599653	N
+hsa-mir-1290	0	0.000000	N
+hsa-mir-1291	3	0.899480	N
+hsa-mir-1292	2	0.599653	N
+hsa-mir-1293	1	0.299827	N
+hsa-mir-1294	0	0.000000	N
+hsa-mir-1295a	2	0.599653	N
+hsa-mir-1295b	0	0.000000	N
+hsa-mir-1296	26	7.795494	N
+hsa-mir-1297	0	0.000000	N
+hsa-mir-1298	1	0.299827	N
+hsa-mir-1299	0	0.000000	N
+hsa-mir-1301	60	17.989602	N
+hsa-mir-1302-1	0	0.000000	N
+hsa-mir-1302-10	0	0.000000	N
+hsa-mir-1302-11	0	0.000000	N
+hsa-mir-1302-2	0	0.000000	N
+hsa-mir-1302-3	1	0.299827	N
+hsa-mir-1302-4	0	0.000000	N
+hsa-mir-1302-5	0	0.000000	N
+hsa-mir-1302-6	0	0.000000	N
+hsa-mir-1302-7	0	0.000000	N
+hsa-mir-1302-8	0	0.000000	N
+hsa-mir-1302-9	0	0.000000	N
+hsa-mir-1303	0	0.000000	N
+hsa-mir-1304	0	0.000000	N
+hsa-mir-1305	1	0.299827	N
+hsa-mir-1306	32	9.594454	N
+hsa-mir-1307	4516	1354.017378	N
+hsa-mir-130a	172	51.570192	N
+hsa-mir-130b	80	23.986136	N
+hsa-mir-132	189	56.667246	N
+hsa-mir-1321	0	0.000000	N
+hsa-mir-1322	0	0.000000	N
+hsa-mir-1323	0	0.000000	N
+hsa-mir-1324	0	0.000000	N
+hsa-mir-133a-1	5	1.499134	N
+hsa-mir-133a-2	8	2.398614	N
+hsa-mir-133b	0	0.000000	N
+hsa-mir-134	1964	588.859639	N
+hsa-mir-1343	7	2.098787	N
+hsa-mir-135a-1	0	0.000000	N
+hsa-mir-135a-2	0	0.000000	N
+hsa-mir-135b	5	1.499134	N
+hsa-mir-136	149	44.674178	N
+hsa-mir-137	0	0.000000	N
+hsa-mir-138-1	1	0.299827	N
+hsa-mir-138-2	0	0.000000	N
+hsa-mir-139	526	157.708844	N
+hsa-mir-140	2196	658.419434	N
+hsa-mir-141	2577	772.653406	N
+hsa-mir-142	8600	2578.509621	N
+hsa-mir-143	93049	27898.574624	N
+hsa-mir-144	149	44.674178	N
+hsa-mir-145	6678	2002.242704	N
+hsa-mir-1468	34	10.194108	N
+hsa-mir-1469	0	0.000000	N
+hsa-mir-146a	306	91.746970	N
+hsa-mir-146b	2259	677.308516	N
+hsa-mir-1470	0	0.000000	N
+hsa-mir-1471	0	0.000000	N
+hsa-mir-147a	0	0.000000	N
+hsa-mir-147b	4	1.199307	N
+hsa-mir-148a	151786	45509.495512	N
+hsa-mir-148b	617	184.993074	N
+hsa-mir-149	603	180.795500	N
+hsa-mir-150	2157	646.726192	N
+hsa-mir-151a	5148	1543.507852	N
+hsa-mir-151b	9	2.698440	N
+hsa-mir-152	791	237.162920	N
+hsa-mir-153-1	0	0.000000	N
+hsa-mir-153-2	76	22.786829	N
+hsa-mir-1537	1	0.299827	N
+hsa-mir-1538	2	0.599653	N
+hsa-mir-1539	0	0.000000	N
+hsa-mir-154	28	8.395148	N
+hsa-mir-155	886	265.646456	N
+hsa-mir-1587	0	0.000000	N
+hsa-mir-15a	434	130.124788	N
+hsa-mir-15b	358	107.337959	N
+hsa-mir-16-1	1060	317.816302	N
+hsa-mir-16-2	1046	313.618728	N
+hsa-mir-17	1090	326.811103	Y
+hsa-mir-181a-1	2228	668.013888	N
+hsa-mir-181a-2	4186	1255.074567	N
+hsa-mir-181b-1	336	100.741771	N
+hsa-mir-181b-2	272	81.552862	N
+hsa-mir-181c	292	87.549396	N
+hsa-mir-181d	37	11.093588	N
+hsa-mir-182	110893	33248.682262	N
+hsa-mir-1825	0	0.000000	N
+hsa-mir-1827	0	0.000000	N
+hsa-mir-183	90032	26993.997469	N
+hsa-mir-184	6	1.798960	N
+hsa-mir-185	185	55.467940	N
+hsa-mir-186	1058	317.216649	N
+hsa-mir-187	414	124.128254	N
+hsa-mir-188	8	2.398614	N
+hsa-mir-18a	16	4.797227	Y
+hsa-mir-18b	1	0.299827	Y
+hsa-mir-1908	0	0.000000	N
+hsa-mir-1909	0	0.000000	N
+hsa-mir-190a	6	1.798960	N
+hsa-mir-190b	125	37.478338	N
+hsa-mir-191	1574	471.927226	N
+hsa-mir-1910	5	1.499134	N
+hsa-mir-1911	0	0.000000	N
+hsa-mir-1912	0	0.000000	N
+hsa-mir-1913	0	0.000000	N
+hsa-mir-1914	1	0.299827	N
+hsa-mir-1915	0	0.000000	N
+hsa-mir-192	1196	358.592733	Y
+hsa-mir-193a	1998	599.053747	N
+hsa-mir-193b	710	212.876957	N
+hsa-mir-194-1	180	53.968806	N
+hsa-mir-194-2	202	60.564993	N
+hsa-mir-195	125	37.478338	N
+hsa-mir-196a-1	220	65.961874	N
+hsa-mir-196a-2	280	83.951476	N
+hsa-mir-196b	1278	383.178523	N
+hsa-mir-197	1723	516.601404	N
+hsa-mir-1972-1	0	0.000000	N
+hsa-mir-1972-2	0	0.000000	N
+hsa-mir-1973	0	0.000000	N
+hsa-mir-1976	53	15.890815	N
+hsa-mir-198	0	0.000000	N
+hsa-mir-199a-1	9883	2963.187278	Y
+hsa-mir-199a-2	15905	4768.743666	Y
+hsa-mir-199b	20236	6067.293105	Y
+hsa-mir-19a	53	15.890815	N
+hsa-mir-19b-1	108	32.381284	N
+hsa-mir-19b-2	119	35.679377	N
+hsa-mir-200a	4041	1211.599695	N
+hsa-mir-200b	2150	644.627405	N
+hsa-mir-200c	31735	9515.000330	N
+hsa-mir-202	4	1.199307	N
+hsa-mir-203a	25812	7739.126785	N
+hsa-mir-203b	294	88.149050	N
+hsa-mir-204	27	8.095321	N
+hsa-mir-205	9303	2789.287792	N
+hsa-mir-2052	0	0.000000	N
+hsa-mir-2053	0	0.000000	N
+hsa-mir-2054	0	0.000000	N
+hsa-mir-206	0	0.000000	N
+hsa-mir-208a	0	0.000000	N
+hsa-mir-208b	0	0.000000	N
+hsa-mir-20a	334	100.142118	N
+hsa-mir-20b	16	4.797227	N
+hsa-mir-21	716980	214969.747486	N
+hsa-mir-210	1491	447.041610	N
+hsa-mir-211	0	0.000000	N
+hsa-mir-2110	5	1.499134	N
+hsa-mir-2113	0	0.000000	N
+hsa-mir-2114	2	0.599653	N
+hsa-mir-2115	0	0.000000	N
+hsa-mir-2116	2	0.599653	N
+hsa-mir-2117	1	0.299827	N
+hsa-mir-212	8	2.398614	N
+hsa-mir-214	129	38.677644	N
+hsa-mir-215	24	7.195841	Y
+hsa-mir-216a	1	0.299827	N
+hsa-mir-216b	0	0.000000	N
+hsa-mir-217	51	15.291162	N
+hsa-mir-218-1	69	20.688042	N
+hsa-mir-218-2	71	21.287696	N
+hsa-mir-219a-1	6	1.798960	N
+hsa-mir-219a-2	0	0.000000	N
+hsa-mir-219b	2	0.599653	N
+hsa-mir-22	410385	123044.380348	N
+hsa-mir-221	402	120.530333	N
+hsa-mir-222	208	62.363954	N
+hsa-mir-223	348	104.339692	N
+hsa-mir-224	173	51.870019	N
+hsa-mir-2276	0	0.000000	N
+hsa-mir-2277	11	3.298094	N
+hsa-mir-2278	0	0.000000	N
+hsa-mir-2355	265	79.454076	N
+hsa-mir-2392	0	0.000000	N
+hsa-mir-23a	12056	3614.710697	Y
+hsa-mir-23b	2910	872.495697	Y
+hsa-mir-23c	1	0.299827	N
+hsa-mir-24-1	1420	425.753914	N
+hsa-mir-24-2	1532	459.334505	N
+hsa-mir-2467	0	0.000000	N
+hsa-mir-25	19668	5896.991539	N
+hsa-mir-2681	0	0.000000	N
+hsa-mir-2682	0	0.000000	N
+hsa-mir-26a-1	1582	474.325840	N
+hsa-mir-26a-2	1601	480.022547	N
+hsa-mir-26b	1992	597.254787	N
+hsa-mir-27a	2234	669.812848	Y
+hsa-mir-27b	1051	315.117862	Y
+hsa-mir-28	25949	7780.203043	N
+hsa-mir-2861	0	0.000000	N
+hsa-mir-2909	0	0.000000	N
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+hsa-mir-299	18	5.396881	N
+hsa-mir-29a	11356	3404.832007	N
+hsa-mir-29b-1	651	195.187182	Y
+hsa-mir-29b-2	1113	333.707117	N
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+hsa-mir-3064	1	0.299827	N
+hsa-mir-3065	40	11.993068	N
+hsa-mir-3074	88	26.384750	N
+hsa-mir-30a	290664	87148.827977	Y
+hsa-mir-30b	917	274.941084	Y
+hsa-mir-30c-1	1482	444.343170	Y
+hsa-mir-30c-2	1763	528.594472	Y
+hsa-mir-30d	19546	5860.412681	N
+hsa-mir-30e	44100	13222.357477	Y
+hsa-mir-31	9	2.698440	N
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+hsa-mir-3130-2	15	4.497401	N
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+hsa-mir-3188	1	0.299827	N
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+hsa-mir-32	50	14.991335	N
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+hsa-mir-3201	0	0.000000	N
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+hsa-mir-3202-2	0	0.000000	N
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+hsa-mir-320b-1	8	2.398614	Y
+hsa-mir-320b-2	15	4.497401	Y
+hsa-mir-320c-1	1	0.299827	N
+hsa-mir-320c-2	1	0.299827	N
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+hsa-mir-320d-2	0	0.000000	N
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+hsa-mir-323a	11	3.298094	N
+hsa-mir-323b	47	14.091855	N
+hsa-mir-324	243	72.857888	N
+hsa-mir-325	0	0.000000	N
+hsa-mir-326	67	20.088389	N
+hsa-mir-328	407	122.029467	N
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+hsa-mir-329-2	0	0.000000	N
+hsa-mir-330	139	41.675911	N
+hsa-mir-331	268	80.353556	N
+hsa-mir-335	601	180.195847	N
+hsa-mir-337	203	60.864820	N
+hsa-mir-338	1462	438.346636	N
+hsa-mir-339	175	52.469673	N
+hsa-mir-33a	25	7.495668	N
+hsa-mir-33b	3	0.899480	N
+hsa-mir-340	74	22.187176	N
+hsa-mir-342	2470	740.571949	N
+hsa-mir-345	73	21.887349	N
+hsa-mir-346	0	0.000000	N
+hsa-mir-34a	707	211.977477	N
+hsa-mir-34b	22	6.596187	N
+hsa-mir-34c	57	17.090122	N
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+hsa-mir-3591	0	0.000000	N
+hsa-mir-3605	75	22.487003	N
+hsa-mir-3606	0	0.000000	N
+hsa-mir-3607	418	125.327561	N
+hsa-mir-3609	1	0.299827	N
+hsa-mir-361	1036	310.620461	N
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+hsa-mir-3611	0	0.000000	N
+hsa-mir-3612	0	0.000000	N
+hsa-mir-3613	29	8.694974	N
+hsa-mir-3614	8	2.398614	N
+hsa-mir-3615	6	1.798960	N
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+hsa-mir-3619	0	0.000000	N
+hsa-mir-362	32	9.594454	N
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+hsa-mir-3652	5	1.499134	N
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+hsa-mir-3654	0	0.000000	N
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+hsa-mir-3680-2	1	0.299827	N
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+hsa-mir-376a-2	1	0.299827	N
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+hsa-mir-376c	9	2.698440	Y
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+hsa-mir-378d-2	1	0.299827	N
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+hsa-mir-3910-2	0	0.000000	N
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+hsa-mir-3912	2	0.599653	N
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+hsa-mir-3913-2	3	0.899480	N
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+hsa-mir-3926-2	1	0.299827	N
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+hsa-mir-3940	2	0.599653	N
+hsa-mir-3941	2	0.599653	N
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+hsa-mir-3978	0	0.000000	N
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+hsa-mir-412	4	1.199307	N
+hsa-mir-421	7	2.098787	N
+hsa-mir-422a	0	0.000000	N
+hsa-mir-423	527	158.008671	N
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+hsa-mir-429	388	116.332760	N
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+hsa-mir-4308	0	0.000000	N
+hsa-mir-4309	0	0.000000	N
+hsa-mir-431	31	9.294628	N
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+hsa-mir-4311	0	0.000000	N
+hsa-mir-4312	0	0.000000	N
+hsa-mir-4313	0	0.000000	N
+hsa-mir-4314	0	0.000000	N
+hsa-mir-4315-1	0	0.000000	N
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+hsa-mir-4318	0	0.000000	N
+hsa-mir-4319	0	0.000000	N
+hsa-mir-432	39	11.693241	N
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+hsa-mir-4322	0	0.000000	N
+hsa-mir-4323	0	0.000000	N
+hsa-mir-4324	0	0.000000	N
+hsa-mir-4325	0	0.000000	N
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+hsa-mir-4327	0	0.000000	N
+hsa-mir-4328	0	0.000000	N
+hsa-mir-4329	0	0.000000	N
+hsa-mir-433	6	1.798960	N
+hsa-mir-4330	0	0.000000	N
+hsa-mir-4417	0	0.000000	N
+hsa-mir-4418	0	0.000000	N
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+hsa-mir-4443	1	0.299827	N
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+hsa-mir-4444-2	3	0.899480	N
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+hsa-mir-450a-2	15	4.497401	N
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+hsa-mir-451a	357	107.038132	N
+hsa-mir-451b	0	0.000000	N
+hsa-mir-452	170	50.970539	N
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+hsa-mir-4520-2	1	0.299827	N
+hsa-mir-4521	0	0.000000	N
+hsa-mir-4522	1	0.299827	N
+hsa-mir-4523	1	0.299827	N
+hsa-mir-4524a	2	0.599653	N
+hsa-mir-4524b	0	0.000000	N
+hsa-mir-4525	1	0.299827	N
+hsa-mir-4526	0	0.000000	N
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+hsa-mir-4536-2	0	0.000000	N
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+hsa-mir-4539	0	0.000000	N
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+hsa-mir-4540	0	0.000000	N
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+hsa-mir-4633	0	0.000000	N
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+hsa-mir-4637	0	0.000000	N
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+hsa-mir-4639	0	0.000000	N
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+hsa-mir-4661	2	0.599653	N
+hsa-mir-4662a	125	37.478338	N
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+hsa-mir-4665	0	0.000000	N
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+hsa-mir-4675	0	0.000000	N
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+hsa-mir-4677	48	14.391682	N
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+hsa-mir-4743	2	0.599653	N
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+hsa-mir-4804	0	0.000000	N
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+hsa-mir-495	26	7.795494	N
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+hsa-mir-499b	0	0.000000	N
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+hsa-mir-5009	0	0.000000	N
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+hsa-mir-500b	10	2.998267	Y
+hsa-mir-501	224	67.161181	N
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+hsa-mir-5011	0	0.000000	N
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+hsa-mir-503	28	8.395148	N
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+hsa-mir-5047	0	0.000000	N
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+hsa-mir-507	0	0.000000	N
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+hsa-mir-5087	1	0.299827	N
+hsa-mir-5088	0	0.000000	N
+hsa-mir-5089	0	0.000000	N
+hsa-mir-509-1	6	1.798960	N
+hsa-mir-509-2	6	1.798960	N
+hsa-mir-509-3	3	0.899480	N
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+hsa-mir-5091	0	0.000000	N
+hsa-mir-5092	0	0.000000	N
+hsa-mir-5093	0	0.000000	N
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+hsa-mir-5100	0	0.000000	N
+hsa-mir-511	72	21.587522	N
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+hsa-mir-512-2	0	0.000000	N
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+hsa-mir-513c	0	0.000000	N
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+hsa-mir-514a-2	1	0.299827	N
+hsa-mir-514a-3	1	0.299827	N
+hsa-mir-514b	0	0.000000	N
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+hsa-mir-516a-2	0	0.000000	N
+hsa-mir-516b-1	0	0.000000	N
+hsa-mir-516b-2	0	0.000000	N
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+hsa-mir-517b	3	0.899480	Y
+hsa-mir-517c	0	0.000000	N
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+hsa-mir-5188	0	0.000000	N
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+hsa-mir-518f	1	0.299827	N
+hsa-mir-5190	0	0.000000	N
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+hsa-mir-5194	0	0.000000	N
+hsa-mir-5195	0	0.000000	N
+hsa-mir-5196	0	0.000000	N
+hsa-mir-5197	0	0.000000	N
+hsa-mir-519a-1	7	2.098787	N
+hsa-mir-519a-2	1	0.299827	Y
+hsa-mir-519b	0	0.000000	N
+hsa-mir-519c	0	0.000000	N
+hsa-mir-519d	0	0.000000	N
+hsa-mir-519e	0	0.000000	N
+hsa-mir-520a	3	0.899480	N
+hsa-mir-520b	1	0.299827	Y
+hsa-mir-520c	0	0.000000	N
+hsa-mir-520d	1	0.299827	N
+hsa-mir-520e	0	0.000000	N
+hsa-mir-520f	0	0.000000	N
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+hsa-mir-527	0	0.000000	N
+hsa-mir-532	2624	786.745261	N
+hsa-mir-539	73	21.887349	N
+hsa-mir-541	3	0.899480	N
+hsa-mir-542	713	213.776437	N
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+hsa-mir-548b	1	0.299827	N
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+hsa-mir-548s	0	0.000000	N
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+hsa-mir-548v	7	2.098787	N
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+hsa-mir-548y	0	0.000000	N
+hsa-mir-548z	0	0.000000	N
+hsa-mir-549a	0	0.000000	N
+hsa-mir-550a-1	6	1.798960	N
+hsa-mir-550a-2	5	1.499134	N
+hsa-mir-550a-3	2	0.599653	N
+hsa-mir-550b-1	0	0.000000	N
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+hsa-mir-551a	0	0.000000	N
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+hsa-mir-553	0	0.000000	N
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+hsa-mir-556	4	1.199307	N
+hsa-mir-557	0	0.000000	N
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+hsa-mir-5582	0	0.000000	N
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+hsa-mir-5682	0	0.000000	N
+hsa-mir-5683	56	16.790295	N
+hsa-mir-5684	5	1.499134	N
+hsa-mir-5685	0	0.000000	N
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+hsa-mir-5688	0	0.000000	N
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+hsa-mir-5690	2	0.599653	N
+hsa-mir-5691	0	0.000000	N
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+hsa-mir-5692b	0	0.000000	N
+hsa-mir-5692c-1	0	0.000000	N
+hsa-mir-5692c-2	0	0.000000	N
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+hsa-mir-5695	2	0.599653	N
+hsa-mir-5696	0	0.000000	N
+hsa-mir-5697	0	0.000000	N
+hsa-mir-5698	6	1.798960	N
+hsa-mir-5699	0	0.000000	N
+hsa-mir-570	1	0.299827	N
+hsa-mir-5700	0	0.000000	N
+hsa-mir-5701-1	0	0.000000	N
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+hsa-mir-5702	0	0.000000	N
+hsa-mir-5703	1	0.299827	N
+hsa-mir-5704	0	0.000000	N
+hsa-mir-5705	0	0.000000	N
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+hsa-mir-5707	0	0.000000	N
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+hsa-mir-571	0	0.000000	N
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+hsa-mir-5739	0	0.000000	N
+hsa-mir-574	488	146.315430	N
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+hsa-mir-582	227	68.060661	N
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+hsa-mir-586	0	0.000000	N
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+hsa-mir-589	230	68.960141	N
+hsa-mir-590	47	14.091855	N
+hsa-mir-591	0	0.000000	N
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+hsa-mir-593	0	0.000000	N
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+hsa-mir-597	1	0.299827	N
+hsa-mir-598	16	4.797227	N
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+hsa-mir-601	0	0.000000	N
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+hsa-mir-6074	0	0.000000	N
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+hsa-mir-6090	0	0.000000	N
+hsa-mir-610	0	0.000000	N
+hsa-mir-611	0	0.000000	N
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+hsa-mir-615	26	7.795494	N
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+hsa-mir-625	785	235.363960	N
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+hsa-mir-627	4	1.199307	N
+hsa-mir-628	370	110.935879	N
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+hsa-mir-641	0	0.000000	N
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+hsa-mir-642b	0	0.000000	N
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+hsa-mir-6501	1	0.299827	N
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+hsa-mir-6509	0	0.000000	N
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+hsa-mir-6511b-1	8	2.398614	N
+hsa-mir-6511b-2	10	2.998267	N
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+hsa-mir-6514	3	0.899480	N
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+hsa-mir-6516	1	0.299827	N
+hsa-mir-652	166	49.771232	N
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+hsa-mir-654	86	25.785096	N
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+hsa-mir-656	3	0.899480	N
+hsa-mir-657	0	0.000000	N
+hsa-mir-658	2	0.599653	N
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+hsa-mir-663b	0	0.000000	N
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+hsa-mir-668	0	0.000000	N
+hsa-mir-670	0	0.000000	N
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+hsa-mir-6715b	0	0.000000	N
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+hsa-mir-6720	1	0.299827	N
+hsa-mir-6721	1	0.299827	N
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+hsa-mir-6723	0	0.000000	N
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+hsa-mir-6730	1	0.299827	N
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+hsa-mir-6737	2	0.599653	N
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+hsa-mir-6741	1	0.299827	N
+hsa-mir-6742	0	0.000000	N
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+hsa-mir-6745	0	0.000000	N
+hsa-mir-6746	2	0.599653	N
+hsa-mir-6747	2	0.599653	N
+hsa-mir-6748	1	0.299827	N
+hsa-mir-6749	0	0.000000	N
+hsa-mir-675	172	51.570192	N
+hsa-mir-6750	1	0.299827	N
+hsa-mir-6751	1	0.299827	N
+hsa-mir-6752	0	0.000000	N
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+hsa-mir-6755	2	0.599653	N
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+hsa-mir-6760	0	0.000000	N
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+hsa-mir-6763	0	0.000000	N
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+hsa-mir-6769b	0	0.000000	N
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+hsa-mir-6772	1	0.299827	N
+hsa-mir-6773	1	0.299827	N
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+hsa-mir-6776	1	0.299827	N
+hsa-mir-6777	3	0.899480	N
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+hsa-mir-6780b	0	0.000000	N
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+hsa-mir-6782	0	0.000000	N
+hsa-mir-6783	1	0.299827	N
+hsa-mir-6784	0	0.000000	N
+hsa-mir-6785	0	0.000000	N
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+hsa-mir-6789	0	0.000000	N
+hsa-mir-6790	0	0.000000	N
+hsa-mir-6791	1	0.299827	N
+hsa-mir-6792	0	0.000000	N
+hsa-mir-6793	2	0.599653	N
+hsa-mir-6794	0	0.000000	N
+hsa-mir-6795	1	0.299827	N
+hsa-mir-6796	0	0.000000	N
+hsa-mir-6797	0	0.000000	N
+hsa-mir-6798	1	0.299827	N
+hsa-mir-6799	0	0.000000	N
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+hsa-mir-6801	0	0.000000	N
+hsa-mir-6802	1	0.299827	N
+hsa-mir-6803	3	0.899480	N
+hsa-mir-6804	0	0.000000	N
+hsa-mir-6805	1	0.299827	N
+hsa-mir-6806	2	0.599653	N
+hsa-mir-6807	0	0.000000	N
+hsa-mir-6808	2	0.599653	N
+hsa-mir-6809	1	0.299827	N
+hsa-mir-6810	0	0.000000	N
+hsa-mir-6811	0	0.000000	N
+hsa-mir-6812	0	0.000000	N
+hsa-mir-6813	0	0.000000	N
+hsa-mir-6814	0	0.000000	N
+hsa-mir-6815	2	0.599653	N
+hsa-mir-6816	0	0.000000	N
+hsa-mir-6817	0	0.000000	N
+hsa-mir-6818	1	0.299827	N
+hsa-mir-6819	0	0.000000	N
+hsa-mir-6820	1	0.299827	N
+hsa-mir-6821	0	0.000000	N
+hsa-mir-6822	0	0.000000	N
+hsa-mir-6823	1	0.299827	N
+hsa-mir-6824	0	0.000000	N
+hsa-mir-6825	0	0.000000	N
+hsa-mir-6826	0	0.000000	N
+hsa-mir-6827	2	0.599653	N
+hsa-mir-6828	0	0.000000	N
+hsa-mir-6829	0	0.000000	N
+hsa-mir-6830	0	0.000000	N
+hsa-mir-6831	0	0.000000	N
+hsa-mir-6832	1	0.299827	N
+hsa-mir-6833	0	0.000000	N
+hsa-mir-6834	0	0.000000	N
+hsa-mir-6835	0	0.000000	N
+hsa-mir-6836	0	0.000000	N
+hsa-mir-6837	18	5.396881	N
+hsa-mir-6838	1	0.299827	N
+hsa-mir-6839	1	0.299827	N
+hsa-mir-6840	0	0.000000	N
+hsa-mir-6841	0	0.000000	N
+hsa-mir-6842	7	2.098787	N
+hsa-mir-6843	0	0.000000	N
+hsa-mir-6844	1	0.299827	N
+hsa-mir-6845	1	0.299827	N
+hsa-mir-6846	0	0.000000	N
+hsa-mir-6847	0	0.000000	N
+hsa-mir-6848	0	0.000000	N
+hsa-mir-6849	0	0.000000	N
+hsa-mir-6850	0	0.000000	N
+hsa-mir-6851	1	0.299827	N
+hsa-mir-6852	2	0.599653	N
+hsa-mir-6853	0	0.000000	N
+hsa-mir-6854	3	0.899480	N
+hsa-mir-6855	0	0.000000	N
+hsa-mir-6856	0	0.000000	N
+hsa-mir-6857	0	0.000000	N
+hsa-mir-6858	0	0.000000	N
+hsa-mir-6859-1	0	0.000000	N
+hsa-mir-6859-2	0	0.000000	N
+hsa-mir-6859-3	0	0.000000	N
+hsa-mir-6859-4	0	0.000000	N
+hsa-mir-6860	0	0.000000	N
+hsa-mir-6861	0	0.000000	N
+hsa-mir-6862-1	0	0.000000	N
+hsa-mir-6862-2	0	0.000000	N
+hsa-mir-6863	0	0.000000	N
+hsa-mir-6864	0	0.000000	N
+hsa-mir-6865	0	0.000000	N
+hsa-mir-6866	0	0.000000	N
+hsa-mir-6867	0	0.000000	N
+hsa-mir-6868	2	0.599653	N
+hsa-mir-6869	0	0.000000	N
+hsa-mir-6870	2	0.599653	N
+hsa-mir-6871	1	0.299827	N
+hsa-mir-6872	0	0.000000	N
+hsa-mir-6873	0	0.000000	N
+hsa-mir-6874	1	0.299827	N
+hsa-mir-6875	1	0.299827	N
+hsa-mir-6876	0	0.000000	N
+hsa-mir-6877	3	0.899480	N
+hsa-mir-6878	0	0.000000	N
+hsa-mir-6879	0	0.000000	N
+hsa-mir-6880	1	0.299827	N
+hsa-mir-6881	0	0.000000	N
+hsa-mir-6882	0	0.000000	N
+hsa-mir-6883	0	0.000000	N
+hsa-mir-6884	1	0.299827	N
+hsa-mir-6885	4	1.199307	N
+hsa-mir-6886	0	0.000000	N
+hsa-mir-6887	0	0.000000	N
+hsa-mir-6888	0	0.000000	N
+hsa-mir-6889	1	0.299827	N
+hsa-mir-6890	0	0.000000	N
+hsa-mir-6891	1	0.299827	N
+hsa-mir-6892	12	3.597920	N
+hsa-mir-6893	0	0.000000	N
+hsa-mir-6894	2	0.599653	N
+hsa-mir-6895	3	0.899480	N
+hsa-mir-7-1	98	29.383017	N
+hsa-mir-7-2	0	0.000000	N
+hsa-mir-7-3	0	0.000000	N
+hsa-mir-708	492	147.514736	N
+hsa-mir-7106	0	0.000000	N
+hsa-mir-7107	0	0.000000	N
+hsa-mir-7108	0	0.000000	N
+hsa-mir-7109	0	0.000000	N
+hsa-mir-711	0	0.000000	N
+hsa-mir-7110	0	0.000000	N
+hsa-mir-7111	0	0.000000	N
+hsa-mir-7112	0	0.000000	N
+hsa-mir-7113	0	0.000000	N
+hsa-mir-7114	0	0.000000	N
+hsa-mir-7150	0	0.000000	N
+hsa-mir-7151	0	0.000000	N
+hsa-mir-7152	2	0.599653	N
+hsa-mir-7153	0	0.000000	N
+hsa-mir-7154	0	0.000000	N
+hsa-mir-7155	1	0.299827	N
+hsa-mir-7156	6	1.798960	N
+hsa-mir-7157	0	0.000000	N
+hsa-mir-7158	0	0.000000	N
+hsa-mir-7159	0	0.000000	N
+hsa-mir-7160	0	0.000000	N
+hsa-mir-7161	0	0.000000	N
+hsa-mir-7162	0	0.000000	N
+hsa-mir-718	0	0.000000	N
+hsa-mir-744	690	206.880423	N
+hsa-mir-7515	0	0.000000	N
+hsa-mir-758	59	17.689775	N
+hsa-mir-759	0	0.000000	N
+hsa-mir-760	5	1.499134	N
+hsa-mir-761	0	0.000000	N
+hsa-mir-762	0	0.000000	N
+hsa-mir-764	0	0.000000	N
+hsa-mir-7641-1	0	0.000000	N
+hsa-mir-7641-2	1	0.299827	N
+hsa-mir-765	1	0.299827	N
+hsa-mir-766	59	17.689775	N
+hsa-mir-767	1	0.299827	N
+hsa-mir-769	122	36.578857	N
+hsa-mir-770	0	0.000000	N
+hsa-mir-7702	1	0.299827	N
+hsa-mir-7703	0	0.000000	N
+hsa-mir-7704	0	0.000000	N
+hsa-mir-7705	2	0.599653	N
+hsa-mir-7706	2	0.599653	N
+hsa-mir-7843	0	0.000000	N
+hsa-mir-7844	0	0.000000	N
+hsa-mir-7845	3	0.899480	N
+hsa-mir-7846	2	0.599653	N
+hsa-mir-7847	0	0.000000	N
+hsa-mir-7848	0	0.000000	N
+hsa-mir-7849	0	0.000000	N
+hsa-mir-7850	0	0.000000	N
+hsa-mir-7851	1	0.299827	N
+hsa-mir-7852	0	0.000000	N
+hsa-mir-7853	0	0.000000	N
+hsa-mir-7854	4	1.199307	N
+hsa-mir-7855	0	0.000000	N
+hsa-mir-7856	0	0.000000	N
+hsa-mir-7973-1	1	0.299827	N
+hsa-mir-7973-2	0	0.000000	N
+hsa-mir-7974	0	0.000000	N
+hsa-mir-7975	0	0.000000	N
+hsa-mir-7976	0	0.000000	N
+hsa-mir-7977	0	0.000000	N
+hsa-mir-7978	0	0.000000	N
+hsa-mir-802	0	0.000000	N
+hsa-mir-8052	0	0.000000	N
+hsa-mir-8053	0	0.000000	N
+hsa-mir-8054	0	0.000000	N
+hsa-mir-8055	0	0.000000	N
+hsa-mir-8056	0	0.000000	N
+hsa-mir-8057	0	0.000000	N
+hsa-mir-8058	0	0.000000	N
+hsa-mir-8059	0	0.000000	N
+hsa-mir-8060	0	0.000000	N
+hsa-mir-8061	0	0.000000	N
+hsa-mir-8062	0	0.000000	N
+hsa-mir-8063	0	0.000000	N
+hsa-mir-8064	0	0.000000	N
+hsa-mir-8065	0	0.000000	N
+hsa-mir-8066	0	0.000000	N
+hsa-mir-8067	0	0.000000	N
+hsa-mir-8068	0	0.000000	N
+hsa-mir-8069-1	0	0.000000	N
+hsa-mir-8069-2	0	0.000000	N
+hsa-mir-8070	0	0.000000	N
+hsa-mir-8071-1	0	0.000000	N
+hsa-mir-8071-2	0	0.000000	N
+hsa-mir-8072	1	0.299827	N
+hsa-mir-8073	0	0.000000	N
+hsa-mir-8074	0	0.000000	N
+hsa-mir-8075	0	0.000000	N
+hsa-mir-8076	0	0.000000	N
+hsa-mir-8077	0	0.000000	N
+hsa-mir-8078	0	0.000000	N
+hsa-mir-8079	0	0.000000	N
+hsa-mir-8080	0	0.000000	N
+hsa-mir-8081	0	0.000000	N
+hsa-mir-8082	0	0.000000	N
+hsa-mir-8083	0	0.000000	N
+hsa-mir-8084	0	0.000000	N
+hsa-mir-8085	0	0.000000	N
+hsa-mir-8086	0	0.000000	N
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+hsa-mir-8485	0	0.000000	N
+hsa-mir-873	0	0.000000	N
+hsa-mir-874	154	46.173312	N
+hsa-mir-875	0	0.000000	N
+hsa-mir-876	0	0.000000	N
+hsa-mir-877	11	3.298094	N
+hsa-mir-885	83	24.885616	N
+hsa-mir-887	27	8.095321	N
+hsa-mir-888	0	0.000000	N
+hsa-mir-889	37	11.093588	N
+hsa-mir-890	0	0.000000	N
+hsa-mir-891a	10	2.998267	N
+hsa-mir-891b	1	0.299827	N
+hsa-mir-892a	0	0.000000	N
+hsa-mir-892b	0	0.000000	N
+hsa-mir-892c	0	0.000000	N
+hsa-mir-9-1	258	77.355289	N
+hsa-mir-9-2	243	72.857888	N
+hsa-mir-9-3	225	67.461008	N
+hsa-mir-920	0	0.000000	N
+hsa-mir-921	0	0.000000	N
+hsa-mir-922	0	0.000000	N
+hsa-mir-924	0	0.000000	N
+hsa-mir-92a-1	11150	3343.067707	N
+hsa-mir-92a-2	10095	3026.750538	N
+hsa-mir-92b	527	158.008671	N
+hsa-mir-93	16263	4876.081625	N
+hsa-mir-933	0	0.000000	N
+hsa-mir-934	0	0.000000	N
+hsa-mir-935	2	0.599653	N
+hsa-mir-936	0	0.000000	N
+hsa-mir-937	5	1.499134	N
+hsa-mir-938	0	0.000000	N
+hsa-mir-939	1	0.299827	N
+hsa-mir-940	23	6.896014	N
+hsa-mir-941-1	0	0.000000	N
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+hsa-mir-941-3	0	0.000000	N
+hsa-mir-941-4	0	0.000000	N
+hsa-mir-941-5	0	0.000000	N
+hsa-mir-942	19	5.696707	N
+hsa-mir-943	0	0.000000	N
+hsa-mir-944	5	1.499134	N
+hsa-mir-95	7	2.098787	N
+hsa-mir-9500	0	0.000000	N
+hsa-mir-96	80	23.986136	N
+hsa-mir-98	186	55.767766	N
+hsa-mir-99a	3626	1087.171615	Y
+hsa-mir-99b	183434	54998.410918	N

data/gdc_data_organized/807b62ed-d3f7-4211-83be-754386ff2c96/MINAE_p_TCGA_200_202_203_SNP_N_GenomeWideSNP_6_G05_955136.grch38.seg.v2.txt

@@ -0,0 +1,588 @@
+GDC_Aliquot	Chromosome	Start	End	Num_Probes	Segment_Mean
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	62920	25256138	14019	-0.16
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	25256188	25320198	26	-0.7509
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	25320253	28915942	1487	-0.1846
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	28916260	67038044	23944	-0.1488
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	67038331	72284670	3288	-0.1747
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	72290430	72297687	9	-1.5456
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	72302735	72345465	48	1.1096
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	72346221	74178770	1085	-0.1684
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	74178898	85222014	7300	0.1657
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	85223451	102485947	11100	-0.1599
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	102487529	103614539	532	0.3996
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+ce888acf-cb20-43f6-936b-be22ed0f817e	1	103760879	104078845	171	0.4305
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+ce888acf-cb20-43f6-936b-be22ed0f817e	1	196843400	196846661	2	5.5842
+ce888acf-cb20-43f6-936b-be22ed0f817e	1	196847600	200430601	2302	1.1073
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+ce888acf-cb20-43f6-936b-be22ed0f817e	15	87650495	87652408	2	-1.7801
+ce888acf-cb20-43f6-936b-be22ed0f817e	15	87653519	101880399	10601	-0.1931
+ce888acf-cb20-43f6-936b-be22ed0f817e	15	101880604	101928837	11	0.2886
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	10777	1488691	475	0.5328
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	1491537	4815632	1535	0.4772
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	4819092	12445422	7290	0.5386
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	12445816	12973809	544	0.6229
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	12974147	13022719	34	0.9936
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	13025302	19143599	3111	0.6104
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	19144694	20672359	1021	0.1873
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	20674699	48520355	7400	0.1554
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	48522662	52455861	2839	0.1943
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	52461184	61618245	6320	-0.6037
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	61619347	61635533	7	-1.6764
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	61636887	64465338	1902	-0.6159
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	64474720	64474803	3	-2.5969
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	64475151	68730609	2549	-0.5826
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	68739957	68743816	5	-3.4538
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	68744285	70145666	654	-0.5897
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	70146223	70212515	18	-0.012
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	70212517	78337711	5492	-0.5988
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	78338543	78350841	16	-1.5661
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	78350868	90082041	10592	-0.6156
+ce888acf-cb20-43f6-936b-be22ed0f817e	16	90089117	90096867	6	-0.0971
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	150733	1005262	470	-0.6229
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	1005289	1060869	16	-1.2372
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	1066181	16962761	10052	-0.6148
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	16962940	18414080	835	0.1575
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	18452078	18592992	30	0.6373
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	18593989	32694041	4165	0.1414
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	32694377	36121793	2673	0.1916
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	36123666	37413676	704	0.1462
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	37413714	37427296	8	-0.7091
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	37435174	41266838	1843	0.1524
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	41266851	41274279	19	-1.0321
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	41276472	46089055	2502	0.1518
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	46089089	46571001	128	0.4711
+ce888acf-cb20-43f6-936b-be22ed0f817e	17	46664059	83091923	21567	0.1808
+ce888acf-cb20-43f6-936b-be22ed0f817e	18	48133	35843670	19557	0.1553
+ce888acf-cb20-43f6-936b-be22ed0f817e	18	35847470	40678763	3228	0.3791
+ce888acf-cb20-43f6-936b-be22ed0f817e	18	40680456	40685425	19	-0.5117
+ce888acf-cb20-43f6-936b-be22ed0f817e	18	40688060	42471713	1215	0.406
+ce888acf-cb20-43f6-936b-be22ed0f817e	18	42476604	42477802	25	-0.195
+ce888acf-cb20-43f6-936b-be22ed0f817e	18	42478430	58724079	10998	0.4031
+ce888acf-cb20-43f6-936b-be22ed0f817e	18	58726561	58728776	2	-1.0564
+ce888acf-cb20-43f6-936b-be22ed0f817e	18	58739856	64158124	3962	0.4051
+ce888acf-cb20-43f6-936b-be22ed0f817e	18	64158765	72306896	5827	0.3724
+ce888acf-cb20-43f6-936b-be22ed0f817e	18	72307018	80257174	5904	0.4058
+ce888acf-cb20-43f6-936b-be22ed0f817e	19	90910	35358420	16705	0.1355
+ce888acf-cb20-43f6-936b-be22ed0f817e	19	35364451	35370946	21	-0.5006
+ce888acf-cb20-43f6-936b-be22ed0f817e	19	35375842	40855189	2776	0.1156
+ce888acf-cb20-43f6-936b-be22ed0f817e	19	40856268	40864888	14	-0.6877
+ce888acf-cb20-43f6-936b-be22ed0f817e	19	40865040	41264326	226	0.1053
+ce888acf-cb20-43f6-936b-be22ed0f817e	19	41267744	48872419	3673	-0.6031
+ce888acf-cb20-43f6-936b-be22ed0f817e	19	48881185	54801157	3375	0.1378
+ce888acf-cb20-43f6-936b-be22ed0f817e	19	54801545	54802362	2	-1.3539
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+ce888acf-cb20-43f6-936b-be22ed0f817e	19	58429147	58433008	3	-0.9375
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+ce888acf-cb20-43f6-936b-be22ed0f817e	20	1580934	1601561	36	-0.1311
+ce888acf-cb20-43f6-936b-be22ed0f817e	20	1609611	1613247	5	2.5769
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+ce888acf-cb20-43f6-936b-be22ed0f817e	22	24691707	26161384	1348	-0.1506
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+ce888acf-cb20-43f6-936b-be22ed0f817e	22	36613146	37177213	401	-0.0214
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+ce888acf-cb20-43f6-936b-be22ed0f817e	X	96375811	112966172	8812	0.201
+ce888acf-cb20-43f6-936b-be22ed0f817e	X	112968904	112984540	21	-0.523
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+ce888acf-cb20-43f6-936b-be22ed0f817e	X	152457140	153341176	506	0.2782
+ce888acf-cb20-43f6-936b-be22ed0f817e	X	153342446	155156881	732	0.225
+ce888acf-cb20-43f6-936b-be22ed0f817e	X	155164107	155190019	11	-0.6
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+ce888acf-cb20-43f6-936b-be22ed0f817e	Y	2782397	6233384	782	-2.4981
+ce888acf-cb20-43f6-936b-be22ed0f817e	Y	6249869	13478396	2481	-2.9569
+ce888acf-cb20-43f6-936b-be22ed0f817e	Y	13478462	13482643	3	-7.5522
+ce888acf-cb20-43f6-936b-be22ed0f817e	Y	13483009	23014812	3173	-2.9759
+ce888acf-cb20-43f6-936b-be22ed0f817e	Y	23029591	56872112	199	-2.5742

data/gdc_data_organized/807b62ed-d3f7-4211-83be-754386ff2c96/TCGA-BRCA.ce888acf-cb20-43f6-936b-be22ed0f817e.ascat2.allelic_specific.seg.txt

@@ -0,0 +1,193 @@
+GDC_Aliquot	Chromosome	Start	End	Copy_Number	Major_Copy_Number	Minor_Copy_Number
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	62920	74178625	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	74178770	85199199	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	85206658	102500115	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	102500129	102529662	6	4	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	102532441	104078744	6	3	3
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	104078845	105398794	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	105399344	119231760	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	119234361	121705338	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	143541857	160327672	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	160327986	160351390	7	4	3
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	160351569	160351569	5	5	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	160351724	171168353	8	5	3
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	171168633	183975115	10	5	5
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	183975472	195805767	11	6	5
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	195806012	195850481	14	7	7
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	195850741	214765853	10	5	5
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	214766518	214800147	15	8	7
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	214801395	221387144	11	6	5
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	221389592	237163048	10	5	5
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	237163179	240769735	11	6	5
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	240770158	248930189	8	5	3
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	12784	72402673	2	1	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	72403291	88816370	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	88816847	91734095	7	5	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	91737435	100222968	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	100223302	165363025	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	165363235	165425062	0	0	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	165426138	168387431	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	168388265	168536613	4	4	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	168537020	183646272	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	183647193	183688454	1	1	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	183688471	189580468	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	189582932	204494139	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	204495109	205015459	2	1	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	205016092	234391472	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	234396415	234412991	1	1	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	234413147	242147305	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr3	20930	146538692	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr3	146539520	146543309	2	1	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr3	146543340	198169247	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr4	68929	18458740	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr4	18459555	18463733	8	4	4
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr4	18463801	20896649	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr4	20897012	20944555	6	3	3
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr4	20944896	20952173	2	1	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr4	20953339	56871097	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr4	56871116	190106768	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	15532	25590735	7	4	3
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+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	28328068	37593089	8	4	4
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+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	45223645	114661192	4	2	2
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+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	128089658	128383398	4	3	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	128385377	128907850	3	2	1
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+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	140711530	141098085	6	5	1
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+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	141218244	178823121	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	178827246	178841756	1	1	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	178841925	181363319	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	149661	35761173	6	4	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	35763925	48670747	5	4	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	48671058	52393748	4	3	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	52394523	56210689	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	56211468	60644763	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	60645646	68831854	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	68831991	68850681	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	68850888	120264352	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	120270179	123875466	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	123878683	127173923	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	127175081	137157000	8	4	4
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	137157347	169579060	4	4	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	169580621	170741917	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	43259	39081900	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	39081914	42251897	6	3	3
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	42252580	62526866	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	62526879	62770104	8	8	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	62770298	62925442	8	4	4
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	62925454	74001919	8	6	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	74002056	76574500	6	4	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	76583004	159334314	3	2	1
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+ce888acf-cb20-43f6-936b-be22ed0f817e	chrY	2782397	26653788	0	0	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chrY	56872112	56872112	2	2	0

data/gdc_data_organized/807b62ed-d3f7-4211-83be-754386ff2c96/TCGA-BRCA.ce888acf-cb20-43f6-936b-be22ed0f817e.ascat3.allelic_specific.seg.txt

@@ -0,0 +1,115 @@
+GDC_Aliquot	Chromosome	Start	End	Copy_Number	Major_Copy_Number	Minor_Copy_Number
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	61735	74161674	3	2	1
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+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	85214725	102529191	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	102529662	104078744	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	104078845	105387872	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	105393954	119257095	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	119258672	121741181	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	143285278	160327986	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	160330642	170926514	8	5	3
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr1	170928132	240768099	11	6	5
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+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	168537020	189578857	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	189579118	204494139	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	204495109	205016529	2	1	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr2	205018824	242147305	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr3	18667	198169247	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr4	12281	56871097	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr4	56871116	190106768	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	15532	25607993	6	3	3
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	25615482	28261267	9	6	3
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	28265810	37376848	8	4	4
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	37382706	45224283	7	5	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	45228711	114650408	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	114650431	128076655	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	128077892	128338512	4	3	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	128339009	128907922	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	128911183	140723434	4	3	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	140724838	141098085	7	6	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr5	141098348	181363319	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	149661	35516613	6	4	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	35516976	49204891	5	4	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	49205054	52582537	4	3	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	52585077	56210689	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	56211468	60446746	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	60446762	120256133	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	120256238	123875466	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	123878683	127175226	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	127177373	137158579	8	4	4
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	137163526	169579060	4	4	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr6	169580621	170741917	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	43259	42251897	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	42252580	62335047	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	62363339	73832131	8	6	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	73832225	76574500	6	4	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr7	76583004	159334314	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr8	81254	145072769	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr9	46587	4908859	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr9	4909719	36814774	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr9	36815059	125059499	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr9	125063624	127879017	7	5	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr9	127880492	138200944	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr10	26823	42505034	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr10	42505362	44076729	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr10	44076955	55156783	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr10	55156877	74478896	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr10	74480730	76928394	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr10	76929254	87827296	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr10	87828714	102195843	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr10	102204771	133769379	2	1	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr11	198572	43265849	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr11	43268800	72156123	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr11	72157546	95523337	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr11	95526455	135074876	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr12	51460	81046434	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr12	81046720	81818333	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr12	81818870	105966627	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr12	105969393	116387120	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr12	116392594	133201603	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr13	18452809	29597324	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr13	29597840	54220097	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr13	54220220	109791991	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr13	109795290	114342922	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr14	18225647	20787565	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr14	20787967	26713010	4	3	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr14	26718472	86050964	2	1	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr14	86052580	95867308	1	1	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr14	95869030	106877229	2	1	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr15	19811075	45398791	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr15	45400826	73411823	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr15	73418519	74034813	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr15	74035142	85696508	3	3	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr15	85704798	85818185	1	1	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr15	85818355	101928837	3	3	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr16	10777	19143599	6	4	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr16	19144694	52455861	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr16	52461184	90221127	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr17	150733	16962940	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr17	16965247	83090856	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr18	48133	35843670	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr18	35847470	80257174	5	3	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr19	90910	41243713	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr19	41245230	41264326	4	4	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr19	41267744	48881185	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr19	48881897	58586487	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr20	80664	16214504	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr20	16214723	64324800	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr21	10336543	46677045	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr22	15294545	26161384	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr22	26163805	36613817	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chr22	36614807	50796027	4	4	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chrX	251810	16316351	2	2	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chrX	16317718	16414696	0	0	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chrX	16417050	54728116	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chrX	54728163	64821612	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chrX	64821671	82442477	3	2	1
+ce888acf-cb20-43f6-936b-be22ed0f817e	chrX	82451902	112966172	4	2	2
+ce888acf-cb20-43f6-936b-be22ed0f817e	chrX	112968904	112984540	1	1	0
+ce888acf-cb20-43f6-936b-be22ed0f817e	chrX	112989640	156004181	4	2	2

data/gdc_data_organized/8183f0fb-2303-4d7b-bccd-55e5031fc7df/2b4ab4eb-a512-4615-a0b2-76fecbb075bf.wxs.aliquot_ensemble_masked.maf.gz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:45610d028d14eb839fa1f2d47043014d14f1b602b88556004ee04a506201f077
+size 53195

data/gdc_data_organized/8183f0fb-2303-4d7b-bccd-55e5031fc7df/TCGA-AC-A6IW-01A-01-TS1.4DD4F175-C0C7-4B5C-B584-B6F2CBE9C3BF.svs

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:cb65f8db0e2fb90b5c1f0ec0ad8b95ad0853bfde2db11f997db99837d5d2df0b
+size 169626411

data/gdc_data_organized/8183f0fb-2303-4d7b-bccd-55e5031fc7df/TCGA-BRCA.fd183f1b-305a-48f9-a42b-a0d2711bcadb.ascat3.allelic_specific.seg.txt

@@ -0,0 +1,121 @@
+GDC_Aliquot	Chromosome	Start	End	Copy_Number	Major_Copy_Number	Minor_Copy_Number
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	61735	31987986	2	1	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	31989682	61549011	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	61549515	61636635	7	6	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	61637004	74883325	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	74883805	75148138	7	6	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	75149341	75322903	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	75323755	75580279	8	7	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	75583982	77620385	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	77623550	78716876	7	6	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	78721706	84075983	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	84076706	85378340	8	7	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	85386679	85656102	12	11	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	85659148	93050420	7	6	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	93053021	95083137	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	95083215	101138535	7	6	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	101138560	121741181	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	143285278	165844271	6	5	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	165844483	165877120	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	165878252	173179579	7	6	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr1	173181825	248930189	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	12784	7427536	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	7431839	10471085	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	10471277	103921937	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	103922599	186862877	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	186862897	187264384	5	5	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	187264866	212534283	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	212534470	213891874	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	213892691	226041700	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	226045056	231930544	1	1	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	231931043	236382175	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	236382350	237812653	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr2	237815781	242147305	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr3	18667	2221748	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr3	2221843	11654215	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr3	11657322	11694793	0	0	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr3	11695671	62121675	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr3	62121892	136846007	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr3	136846770	140572315	4	4	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr3	140572571	198169247	5	5	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr4	12281	48331629	1	1	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr4	48333804	185610273	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr4	185610539	185961509	1	1	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr4	185962055	190106768	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr5	15532	107435356	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr5	107435508	107645323	0	0	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr5	107645923	181363319	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr6	149661	11774393	1	1	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr6	11774511	20731293	4	4	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr6	20733631	21027530	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr6	21027828	36923007	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr6	36923552	37236764	7	7	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr6	37237426	64053863	4	4	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr6	64053953	125273197	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr6	125275604	125404940	5	5	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr6	125407462	166850453	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr6	166850613	170741917	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr7	43259	63049159	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr7	63049498	120497559	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr7	120497617	120875327	4	4	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr7	120878686	159334314	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	81254	3426042	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	3428965	4294388	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	4296006	34230978	4	2	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	34231012	39232456	6	5	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	39239997	48500830	7	6	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	48506423	51707659	5	3	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	51708808	52596560	7	5	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	52598632	60571886	5	3	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	60572066	60762382	1	1	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	60764967	95435795	5	3	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	95435926	127759804	6	4	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	127765285	140973828	5	3	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr8	140974331	145072769	6	4	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr9	46587	129677178	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr9	129679467	138200944	1	1	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr10	26823	41716746	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr10	41716766	133769379	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr11	198572	128366760	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr11	128369748	128484271	4	4	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr11	128484380	135074876	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr12	51460	11966109	5	3	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr12	11970530	133201603	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr13	18452809	114342922	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr14	18225647	21463123	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr14	21468686	22578899	0	0	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr14	22578966	68116566	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr14	68116911	68926311	0	0	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr14	68928864	106877229	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr15	19811075	78284865	2	1	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr15	78286317	92709881	1	1	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr15	92717320	101928837	2	1	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr16	10777	70862130	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr16	70862723	71174297	4	4	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr16	71176023	90221127	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr17	150733	11768596	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr17	11768761	12058438	0	0	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr17	12061993	57807938	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr17	57808659	83090856	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr18	48133	3785122	4	2	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr18	3785643	4237574	1	1	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr18	4240553	4437401	0	0	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr18	4440419	32317264	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr18	32317526	46133684	2	1	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr18	46138652	80257174	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr19	90910	7597643	4	2	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr19	7598882	23884955	4	3	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr19	23888352	42683902	4	2	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr19	42683928	46805435	6	4	2
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr19	46810150	58586487	3	2	1
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr20	80664	58473359	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr20	58477949	64324800	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr21	10336543	26048783	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr21	26052267	26165266	1	1	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr21	26165438	46677045	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr22	15294545	44102921	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr22	44103763	44656082	1	1	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr22	44659704	46582583	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr22	46582879	49991802	3	3	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chr22	49996657	50796027	2	2	0
+fd183f1b-305a-48f9-a42b-a0d2711bcadb	chrX	251810	156004181	1	1	0

data/gdc_data_organized/81b70c58-4a12-448c-a594-2ade44f6a0ae/KEBAB_p_TCGASNP_226_227_N_GenomeWideSNP_6_E02_1151484.nocnv_grch38.seg.v2.txt

@@ -0,0 +1,56 @@
+GDC_Aliquot	Chromosome	Start	End	Num_Probes	Segment_Mean
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	1	3301765	85125987	47247	0.0016
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	1	85128754	85129076	4	-1.2892
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	1	85131779	109772255	14364	-0.0015
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	1	109775585	109777714	3	-1.0465
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	1	109778087	247650984	68171	0.0018
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	2	480597	241537572	132231	0.0008
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	3	2170634	54043307	29822	-0.0018
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	3	54043784	54044342	2	-1.6391
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	3	54048192	167395417	61423	0.0014
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	3	167397011	167397309	3	-1.0136
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	3	167399355	197812401	15949	0.0013
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	4	1059384	187842528	103515	0.0013
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	5	913983	37254357	21620	0.0044
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	5	37254661	37255481	2	-1.2009
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	5	37259058	85279399	24006	-0.0028
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	5	85281481	85282432	2	-1.6289
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	5	85283398	180934240	55506	-0.0019
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	6	1011760	113566496	63373	0.0023
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	6	113578759	113578971	2	-1.4191
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	6	113579716	135014291	12524	0.0062
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	6	135021116	135022100	2	1.1531
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	6	135028432	150907756	9850	0.0027
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	6	150907871	150907887	3	-1.4235
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	6	150910731	170596889	11426	0.005
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	7	664936	158592540	81960	-0.0027
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	8	667625	144182542	82241	0.0004
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	9	789794	128050213	63583	0.0004
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	9	128050917	128053707	3	-1.1217
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	9	128053746	138044505	4912	0.0076
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	10	366509	3224190	1444	0.0007
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	10	3227702	3228477	2	-1.3566
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	10	3231358	133411599	79870	-0.0003
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	11	456012	134272740	77587	-0.0005
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	12	780472	132605822	74355	-0.0002
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	13	18874255	114226675	57013	0.0031
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	14	20033191	73953773	30358	-0.0001
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	14	73957074	73957079	2	1.324
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	14	73958353	96123023	14285	0.0006
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	14	96123846	96125697	2	-1.2146
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	14	96126554	105533894	5154	0.0043
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	15	23437561	101344124	44798	0.0008
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	16	603333	48535326	14937	0.0016
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	16	48535903	48537679	2	-1.3051
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	16	48539167	86218938	24688	0.0022
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	16	86221243	86223607	4	-0.8183
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	16	86227158	89317317	1593	0.0048
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	17	1074619	82959812	37292	0.002
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	18	326691	79349796	42970	0.0091
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	19	283868	30793899	11349	0.0052
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	19	30797211	30797633	2	-1.3549
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	19	30799692	58370362	12804	0.0048
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	20	472817	63588502	37570	0.002
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	21	13974127	46262057	20596	-0.0014
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	22	16934932	48940621	17094	0.0037
+20db0b1a-81d6-4de6-b77e-4664e1705ea6	X	3236359	155677414	63968	0.0015

data/gdc_data_organized/81b70c58-4a12-448c-a594-2ade44f6a0ae/KEBAB_p_TCGASNP_226_227_N_GenomeWideSNP_6_H07_1151588.grch38.seg.v2.txt

@@ -0,0 +1,422 @@
+GDC_Aliquot	Chromosome	Start	End	Num_Probes	Segment_Mean
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	62920	15823420	8338	0.041
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	15827002	15828515	10	-1.3428
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	15839166	15867656	12	-0.1491
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	15868075	16488499	276	0.0501
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	16489035	16569132	12	-0.2398
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	16570326	16641716	19	0.3746
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	16641879	16689764	15	-0.0122
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	16718963	16767571	11	0.8418
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	16773735	21409834	3073	0.0434
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	21410973	21483259	30	-0.2819
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	21484015	25256850	2222	0.025
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	25266637	25320455	24	-1.8953
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	25336819	30265657	2390	0.0184
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	30265687	30266509	3	-1.2803
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	30266949	34626073	2557	0.0237
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	34637053	34638890	20	-0.6607
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	34648667	62391024	17054	0.0194
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	62391080	75585159	8691	-0.0019
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	75589078	75589169	2	-2.4326
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	75593824	103614695	18098	-0.0059
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	103614714	103717410	9	-0.5882
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	103717617	105476583	919	0.0027
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	105476614	105479753	16	0.8124
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	105481433	108358141	2006	0.0045
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	108358744	108367395	3	-0.9837
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	108368123	109684695	627	-0.0085
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	109684893	109697533	13	-0.6625
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	109697556	112147704	1950	-0.0025
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	112153343	112154619	23	0.4682
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	112154754	143459641	5165	0.008
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	143494500	146044884	305	0.4009
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	146062439	146250588	5	-0.8306
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	146716041	152583230	2132	0.4528
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	152583291	152614100	33	-1.8832
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	152614118	152787202	168	0.4418
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	152789447	152796224	37	-0.2198
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	152801429	153018584	168	0.4723
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	153023248	153028238	4	-0.6727
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	153028502	179354603	17725	0.4534
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	179361393	179364180	4	-1.047
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	179370071	193186662	9167	0.4493
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	193187149	193187218	4	-0.4639
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	193190593	194479104	942	0.4414
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	194482281	194485888	2	2.5154
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	194487886	196758720	1452	0.4405
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	196761905	196762956	3	-1.1216
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	196769493	209897717	8845	0.4597
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	209908268	209913207	4	1.5091
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	209920149	211945396	1358	0.4543
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	211945753	211946530	2	1.5237
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	211948478	222193326	7244	0.4616
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	222201492	222203662	2	-0.6781
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	222208792	225485591	1980	0.4628
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	225485814	225486082	2	-0.8957
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	225486553	240228440	10570	0.467
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	240230715	240230839	6	-0.4561
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	240232805	248525314	5682	0.4679
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	248546369	248574146	4	-0.1757
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	248585893	248633912	32	-0.8616
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	248645563	248645808	2	-0.2982
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	1	248646068	248930189	139	0.4504
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	2	12784	4158097	2987	0.0223
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	2	4166274	4176429	42	-0.8028
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	2	4182472	34466002	21053	0.0108
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	2	34474248	34512096	47	0.4135
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	2	34512489	50891523	11888	0.0054
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	2	50893085	50898422	7	0.7412
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	2	50898940	52514599	1111	0.0012
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	2	52516787	52554053	31	0.3289
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	2	52554137	81280447	18768	0.0047
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	2	81299111	81332053	19	-1.041
+0016bb20-f9ab-42ad-9d22-154bc12dfc14	2	81334932	86710564	3139	0.0113
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data/gdc_data_organized/81b70c58-4a12-448c-a594-2ade44f6a0ae/TCGA-AC-A3TN-01Z-00-DX1.F00E81C7-0CA2-49E8-A30F-DE423538E93C.svs

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data/gdc_data_organized/81b70c58-4a12-448c-a594-2ade44f6a0ae/c005b7df-5ff8-498f-a2ec-d89a46049517.mirbase21.mirnas.quantification.txt

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+miRNA_ID	read_count	reads_per_million_miRNA_mapped	cross-mapped
+hsa-let-7a-1	57688	13449.832646	N
+hsa-let-7a-2	57974	13516.512929	N
+hsa-let-7a-3	58025	13528.403469	N
+hsa-let-7b	234564	54688.090155	N
+hsa-let-7c	9034	2106.257595	N
+hsa-let-7d	1574	366.974702	N
+hsa-let-7e	2647	617.142335	N
+hsa-let-7f-1	7942	1851.660153	N
+hsa-let-7f-2	7982	1860.986066	N
+hsa-let-7g	2105	490.776205	N
+hsa-let-7i	1592	371.171363	N
+hsa-mir-1-1	5	1.165739	N
+hsa-mir-1-2	14	3.264070	N
+hsa-mir-100	14384	3353.598544	N
+hsa-mir-101-1	58818	13713.289707	N
+hsa-mir-101-2	58582	13658.266816	N
+hsa-mir-103a-1	55875	13027.135611	Y
+hsa-mir-103a-2	55909	13035.062637	Y
+hsa-mir-103b-1	0	0.000000	N
+hsa-mir-103b-2	0	0.000000	N
+hsa-mir-105-1	0	0.000000	N
+hsa-mir-105-2	0	0.000000	N
+hsa-mir-106a	59	13.755723	Y
+hsa-mir-106b	2141	499.169527	N
+hsa-mir-107	399	93.025989	Y
+hsa-mir-10a	58730	13692.772697	N
+hsa-mir-10b	107507	25065.024933	N
+hsa-mir-1178	0	0.000000	N
+hsa-mir-1179	1	0.233148	N
+hsa-mir-1180	32	7.460731	N
+hsa-mir-1181	1	0.233148	N
+hsa-mir-1182	0	0.000000	N
+hsa-mir-1183	0	0.000000	N
+hsa-mir-1184-1	0	0.000000	N
+hsa-mir-1184-2	0	0.000000	N
+hsa-mir-1184-3	0	0.000000	N
+hsa-mir-1185-1	1	0.233148	N
+hsa-mir-1185-2	0	0.000000	N
+hsa-mir-1193	0	0.000000	N
+hsa-mir-1197	1	0.233148	N
+hsa-mir-1199	0	0.000000	N
+hsa-mir-1200	0	0.000000	N
+hsa-mir-1202	0	0.000000	N
+hsa-mir-1203	0	0.000000	N
+hsa-mir-1204	0	0.000000	N
+hsa-mir-1205	0	0.000000	N
+hsa-mir-1206	0	0.000000	N
+hsa-mir-1207	0	0.000000	N
+hsa-mir-1208	0	0.000000	N
+hsa-mir-122	0	0.000000	N
+hsa-mir-1224	0	0.000000	N
+hsa-mir-1225	0	0.000000	N
+hsa-mir-1226	2	0.466296	N
+hsa-mir-1227	0	0.000000	N
+hsa-mir-1228	6	1.398887	N
+hsa-mir-1229	0	0.000000	N
+hsa-mir-1231	0	0.000000	N
+hsa-mir-1233-1	0	0.000000	N
+hsa-mir-1233-2	0	0.000000	N
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+hsa-mir-1236	0	0.000000	N
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+hsa-mir-1244-4	0	0.000000	N
+hsa-mir-1245a	16	3.730365	N
+hsa-mir-1245b	0	0.000000	N
+hsa-mir-1246	0	0.000000	N
+hsa-mir-1247	44	10.258505	N
+hsa-mir-1248	1	0.233148	N
+hsa-mir-1249	6	1.398887	N
+hsa-mir-1250	0	0.000000	N
+hsa-mir-1251	0	0.000000	N
+hsa-mir-1252	0	0.000000	N
+hsa-mir-1253	0	0.000000	N
+hsa-mir-1254-1	2	0.466296	N
+hsa-mir-1254-2	1	0.233148	N
+hsa-mir-1255a	1	0.233148	N
+hsa-mir-1255b-1	0	0.000000	N
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+hsa-mir-1257	0	0.000000	N
+hsa-mir-1258	3	0.699444	N
+hsa-mir-125a	2784	649.083589	N
+hsa-mir-125b-1	2087	486.579544	N
+hsa-mir-125b-2	2220	517.588207	N
+hsa-mir-126	9805	2286.014580	N
+hsa-mir-1260a	0	0.000000	N
+hsa-mir-1260b	1	0.233148	N
+hsa-mir-1261	0	0.000000	N
+hsa-mir-1262	0	0.000000	N
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+hsa-mir-1264	0	0.000000	N
+hsa-mir-1265	0	0.000000	N
+hsa-mir-1266	66	15.387758	N
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+hsa-mir-127	6397	1491.446738	N
+hsa-mir-1270	5	1.165739	N
+hsa-mir-1271	12	2.797774	N
+hsa-mir-1272	0	0.000000	N
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+hsa-mir-1278	0	0.000000	N
+hsa-mir-1279	0	0.000000	N
+hsa-mir-128-1	253	58.986404	N
+hsa-mir-128-2	144	33.573289	N
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+hsa-mir-1287	182	42.432907	N
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+hsa-mir-129-1	1	0.233148	N
+hsa-mir-129-2	3	0.699444	N
+hsa-mir-1290	0	0.000000	N
+hsa-mir-1291	1	0.233148	N
+hsa-mir-1292	2	0.466296	N
+hsa-mir-1293	0	0.000000	N
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+hsa-mir-1295a	1	0.233148	N
+hsa-mir-1295b	0	0.000000	N
+hsa-mir-1296	25	5.828696	N
+hsa-mir-1297	0	0.000000	N
+hsa-mir-1298	0	0.000000	N
+hsa-mir-1299	0	0.000000	N
+hsa-mir-1301	33	7.693879	N
+hsa-mir-1302-1	0	0.000000	N
+hsa-mir-1302-10	0	0.000000	N
+hsa-mir-1302-11	0	0.000000	N
+hsa-mir-1302-2	0	0.000000	N
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+hsa-mir-1302-4	0	0.000000	N
+hsa-mir-1302-5	0	0.000000	N
+hsa-mir-1302-6	0	0.000000	N
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+hsa-mir-1304	2	0.466296	N
+hsa-mir-1305	0	0.000000	N
+hsa-mir-1306	30	6.994435	N
+hsa-mir-1307	6448	1503.337278	N
+hsa-mir-130a	213	49.660490	N
+hsa-mir-130b	43	10.025357	N
+hsa-mir-132	260	60.618439	N
+hsa-mir-1321	0	0.000000	N
+hsa-mir-1322	0	0.000000	N
+hsa-mir-1323	0	0.000000	N
+hsa-mir-1324	0	0.000000	N
+hsa-mir-133a-1	1	0.233148	N
+hsa-mir-133a-2	12	2.797774	N
+hsa-mir-133b	0	0.000000	N
+hsa-mir-134	1563	364.410075	N
+hsa-mir-1343	0	0.000000	N
+hsa-mir-135a-1	0	0.000000	N
+hsa-mir-135a-2	3	0.699444	N
+hsa-mir-135b	5	1.165739	N
+hsa-mir-136	424	98.854685	N
+hsa-mir-137	3	0.699444	N
+hsa-mir-138-1	3	0.699444	N
+hsa-mir-138-2	1	0.233148	N
+hsa-mir-139	146	34.039585	N
+hsa-mir-140	3659	853.087950	N
+hsa-mir-141	11699	2727.596591	N
+hsa-mir-142	5878	1370.443009	N
+hsa-mir-143	244449	56992.756563	N
+hsa-mir-144	344	80.202857	N
+hsa-mir-145	4729	1102.556140	N
+hsa-mir-1468	12	2.797774	N
+hsa-mir-1469	0	0.000000	N
+hsa-mir-146a	146	34.039585	N
+hsa-mir-146b	1157	269.752052	N
+hsa-mir-1470	0	0.000000	N
+hsa-mir-1471	0	0.000000	N
+hsa-mir-147a	0	0.000000	N
+hsa-mir-147b	3	0.699444	N
+hsa-mir-148a	165138	38501.568152	N
+hsa-mir-148b	821	191.414377	N
+hsa-mir-149	915	213.330274	N
+hsa-mir-150	1451	338.297517	N
+hsa-mir-151a	10410	2427.069024	N
+hsa-mir-151b	6	1.398887	N
+hsa-mir-152	1516	353.452127	N
+hsa-mir-153-1	4	0.932591	N
+hsa-mir-153-2	86	20.050714	N
+hsa-mir-1537	2	0.466296	N
+hsa-mir-1538	0	0.000000	N
+hsa-mir-1539	0	0.000000	N
+hsa-mir-154	40	9.325914	N
+hsa-mir-155	620	144.551661	N
+hsa-mir-1587	0	0.000000	N
+hsa-mir-15a	541	126.132982	N
+hsa-mir-15b	376	87.663588	N
+hsa-mir-16-1	514	119.837990	N
+hsa-mir-16-2	556	129.630200	N
+hsa-mir-17	1219	284.207218	Y
+hsa-mir-181a-1	4091	953.807817	N
+hsa-mir-181a-2	6052	1411.010733	N
+hsa-mir-181b-1	664	154.810166	N
+hsa-mir-181b-2	624	145.484253	N
+hsa-mir-181c	773	180.223281	N
+hsa-mir-181d	155	36.137915	N
+hsa-mir-182	212138	49459.516675	N
+hsa-mir-1825	0	0.000000	N
+hsa-mir-1827	0	0.000000	N
+hsa-mir-183	55499	12939.472023	N
+hsa-mir-184	78	18.185532	N
+hsa-mir-185	407	94.891171	N
+hsa-mir-186	704	164.136080	N
+hsa-mir-187	29	6.761287	N
+hsa-mir-188	5	1.165739	N
+hsa-mir-18a	14	3.264070	Y
+hsa-mir-18b	3	0.699444	Y
+hsa-mir-1908	0	0.000000	N
+hsa-mir-1909	0	0.000000	N
+hsa-mir-190a	33	7.693879	N
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+hsa-mir-191	2475	577.040906	N
+hsa-mir-1910	0	0.000000	N
+hsa-mir-1911	0	0.000000	N
+hsa-mir-1912	0	0.000000	N
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+hsa-mir-1915	0	0.000000	N
+hsa-mir-192	2522	587.998855	Y
+hsa-mir-193a	2572	599.656247	N
+hsa-mir-193b	597	139.189261	N
+hsa-mir-194-1	483	112.610407	N
+hsa-mir-194-2	490	114.242442	N
+hsa-mir-195	151	35.205324	N
+hsa-mir-196a-1	353	82.301188	N
+hsa-mir-196a-2	339	79.037118	N
+hsa-mir-196b	704	164.136080	N
+hsa-mir-197	764	178.124950	N
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+hsa-mir-1972-2	0	0.000000	N
+hsa-mir-1973	0	0.000000	N
+hsa-mir-1976	49	11.424244	N
+hsa-mir-198	0	0.000000	N
+hsa-mir-199a-1	12568	2930.202065	Y
+hsa-mir-199a-2	19673	4586.717474	Y
+hsa-mir-199b	23623	5507.651446	Y
+hsa-mir-19a	76	17.719236	N
+hsa-mir-19b-1	186	43.365498	N
+hsa-mir-19b-2	174	40.567724	N
+hsa-mir-200a	7810	1820.884638	N
+hsa-mir-200b	8359	1948.882802	N
+hsa-mir-200c	54965	12814.971076	N
+hsa-mir-202	7	1.632035	N
+hsa-mir-203a	15323	3572.524366	N
+hsa-mir-203b	126	29.376628	N
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+hsa-mir-205	10181	2373.678168	N
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+hsa-mir-208b	0	0.000000	N
+hsa-mir-20a	516	120.304286	N
+hsa-mir-20b	244	56.888073	N
+hsa-mir-21	1420803	331257.151810	N
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+hsa-mir-2113	1	0.233148	N
+hsa-mir-2114	2	0.466296	N
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+hsa-mir-2117	0	0.000000	N
+hsa-mir-212	2	0.466296	N
+hsa-mir-214	326	76.006196	N
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+hsa-mir-216b	0	0.000000	N
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+hsa-mir-218-1	77	17.952384	N
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+hsa-mir-219a-2	1	0.233148	N
+hsa-mir-219b	0	0.000000	N
+hsa-mir-22	306387	71433.467533	N
+hsa-mir-221	431	100.486719	N
+hsa-mir-222	95	22.149045	N
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+hsa-mir-23c	0	0.000000	N
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+hsa-mir-3129	2	0.466296	N
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+hsa-mir-3177	1	0.233148	N
+hsa-mir-3178	1	0.233148	N
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+hsa-mir-3193	1	0.233148	N
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+hsa-mir-3202-2	1	0.233148	N
+hsa-mir-320a	1047	244.105789	Y
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+hsa-mir-320c-2	1	0.233148	N
+hsa-mir-320d-1	1	0.233148	N
+hsa-mir-320d-2	3	0.699444	N
+hsa-mir-320e	0	0.000000	N
+hsa-mir-323a	21	4.896105	N
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+hsa-mir-324	166	38.702542	N
+hsa-mir-325	0	0.000000	N
+hsa-mir-326	36	8.393322	N
+hsa-mir-328	122	28.444037	N
+hsa-mir-329-1	0	0.000000	N
+hsa-mir-329-2	3	0.699444	N
+hsa-mir-330	227	52.924560	N
+hsa-mir-331	264	61.551030	N
+hsa-mir-335	225	52.458264	N
+hsa-mir-337	169	39.401985	N
+hsa-mir-338	1794	418.267227	N
+hsa-mir-339	255	59.452699	N
+hsa-mir-33a	235	54.789743	N
+hsa-mir-33b	31	7.227583	N
+hsa-mir-340	100	23.314784	N
+hsa-mir-342	2342	546.032243	N
+hsa-mir-345	53	12.356836	N
+hsa-mir-346	0	0.000000	N
+hsa-mir-34a	834	194.445299	N
+hsa-mir-34b	50	11.657392	N
+hsa-mir-34c	340	79.270266	N
+hsa-mir-3529	0	0.000000	N
+hsa-mir-3591	0	0.000000	N
+hsa-mir-3605	8	1.865183	N
+hsa-mir-3606	0	0.000000	N
+hsa-mir-3607	79	18.418679	N
+hsa-mir-3609	0	0.000000	N
+hsa-mir-361	1377	321.044577	N
+hsa-mir-3610	2	0.466296	N
+hsa-mir-3611	0	0.000000	N
+hsa-mir-3612	0	0.000000	N
+hsa-mir-3613	54	12.589983	N
+hsa-mir-3614	8	1.865183	N
+hsa-mir-3615	28	6.528140	N
+hsa-mir-3616	0	0.000000	N
+hsa-mir-3617	0	0.000000	N
+hsa-mir-3618	0	0.000000	N
+hsa-mir-3619	6	1.398887	N
+hsa-mir-362	26	6.061844	N
+hsa-mir-3620	0	0.000000	N
+hsa-mir-3621	0	0.000000	N
+hsa-mir-3622a	1	0.233148	N
+hsa-mir-3622b	0	0.000000	N
+hsa-mir-363	186	43.365498	N
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+hsa-mir-3651	1	0.233148	N
+hsa-mir-3652	3	0.699444	N
+hsa-mir-3653	11	2.564626	N
+hsa-mir-3654	1	0.233148	N
+hsa-mir-3655	2	0.466296	N
+hsa-mir-3656	0	0.000000	N
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+hsa-mir-3658	0	0.000000	N
+hsa-mir-3659	0	0.000000	N
+hsa-mir-365a	277	64.581952	Y
+hsa-mir-365b	275	64.115656	Y
+hsa-mir-3660	0	0.000000	N
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+hsa-mir-3662	2	0.466296	N
+hsa-mir-3663	0	0.000000	N
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+hsa-mir-3677	7	1.632035	N
+hsa-mir-3678	2	0.466296	N
+hsa-mir-3679	0	0.000000	N
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+hsa-mir-3683	0	0.000000	N
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+hsa-mir-3689f	0	0.000000	N
+hsa-mir-369	63	14.688314	N
+hsa-mir-3690-1	2	0.466296	N
+hsa-mir-3690-2	0	0.000000	N
+hsa-mir-3691	1	0.233148	N
+hsa-mir-3692	0	0.000000	N
+hsa-mir-370	62	14.455166	N
+hsa-mir-3713	0	0.000000	N
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+hsa-mir-373	0	0.000000	N
+hsa-mir-374a	2356	549.296313	N
+hsa-mir-374b	160	37.303655	N
+hsa-mir-374c	0	0.000000	N
+hsa-mir-375	57066	13304.814689	N
+hsa-mir-376a-1	8	1.865183	N
+hsa-mir-376a-2	2	0.466296	N
+hsa-mir-376b	7	1.632035	Y
+hsa-mir-376c	26	6.061844	Y
+hsa-mir-377	18	4.196661	N
+hsa-mir-378a	858	200.040848	N
+hsa-mir-378b	0	0.000000	N
+hsa-mir-378c	11	2.564626	N
+hsa-mir-378d-1	1	0.233148	N
+hsa-mir-378d-2	0	0.000000	N
+hsa-mir-378e	0	0.000000	N
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+hsa-mir-378g	0	0.000000	N
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+hsa-mir-378i	0	0.000000	N
+hsa-mir-378j	0	0.000000	N
+hsa-mir-379	4317	1006.499229	N
+hsa-mir-380	6	1.398887	N
+hsa-mir-381	194	45.230681	N
+hsa-mir-382	149	34.739028	N
+hsa-mir-383	5	1.165739	N
+hsa-mir-384	0	0.000000	N
+hsa-mir-3907	0	0.000000	N
+hsa-mir-3908	0	0.000000	N
+hsa-mir-3909	3	0.699444	N
+hsa-mir-3910-1	0	0.000000	N
+hsa-mir-3910-2	0	0.000000	N
+hsa-mir-3911	0	0.000000	N
+hsa-mir-3912	5	1.165739	N
+hsa-mir-3913-1	11	2.564626	N
+hsa-mir-3913-2	16	3.730365	N
+hsa-mir-3914-1	0	0.000000	N
+hsa-mir-3914-2	0	0.000000	N
+hsa-mir-3915	0	0.000000	N
+hsa-mir-3916	0	0.000000	N
+hsa-mir-3917	2	0.466296	N
+hsa-mir-3918	0	0.000000	N
+hsa-mir-3919	2	0.466296	N
+hsa-mir-3920	0	0.000000	N
+hsa-mir-3921	0	0.000000	N
+hsa-mir-3922	2	0.466296	N
+hsa-mir-3923	0	0.000000	N
+hsa-mir-3924	0	0.000000	N
+hsa-mir-3925	0	0.000000	N
+hsa-mir-3926-1	6	1.398887	N
+hsa-mir-3926-2	3	0.699444	N
+hsa-mir-3927	0	0.000000	N
+hsa-mir-3928	9	2.098331	N
+hsa-mir-3929	0	0.000000	N
+hsa-mir-3934	6	1.398887	N
+hsa-mir-3935	0	0.000000	N
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+hsa-mir-3938	0	0.000000	N
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+hsa-mir-3978	0	0.000000	N
+hsa-mir-409	172	40.101429	N
+hsa-mir-410	84	19.584419	N
+hsa-mir-411	23	5.362400	N
+hsa-mir-412	54	12.589983	N
+hsa-mir-421	3	0.699444	N
+hsa-mir-422a	0	0.000000	N
+hsa-mir-423	572	133.360565	N
+hsa-mir-424	139	32.407550	N
+hsa-mir-425	656	152.944984	N
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+hsa-mir-4444-2	4	0.932591	N
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+hsa-mir-4492	2	0.466296	N
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+hsa-mir-451a	2883	672.165225	N
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+hsa-mir-452	70	16.320349	N
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+hsa-mir-4522	2	0.466296	N
+hsa-mir-4523	0	0.000000	N
+hsa-mir-4524a	1	0.233148	N
+hsa-mir-4524b	0	0.000000	N
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+hsa-mir-4527	0	0.000000	N
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+hsa-mir-4536-1	0	0.000000	N
+hsa-mir-4536-2	1	0.233148	N
+hsa-mir-4537	0	0.000000	N
+hsa-mir-4538	0	0.000000	N
+hsa-mir-4539	0	0.000000	N
+hsa-mir-454	16	3.730365	N
+hsa-mir-4540	0	0.000000	N
+hsa-mir-455	595	138.722965	N
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+hsa-mir-4633	0	0.000000	N
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+hsa-mir-4637	0	0.000000	N
+hsa-mir-4638	0	0.000000	N
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+hsa-mir-4649	3	0.699444	N
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+hsa-mir-4660	5	1.165739	N
+hsa-mir-4661	16	3.730365	N
+hsa-mir-4662a	69	16.087201	N
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+hsa-mir-4675	1	0.233148	N
+hsa-mir-4676	1	0.233148	N
+hsa-mir-4677	24	5.595548	N
+hsa-mir-4678	0	0.000000	N
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+hsa-mir-4683	1	0.233148	N
+hsa-mir-4684	0	0.000000	N
+hsa-mir-4685	2	0.466296	N
+hsa-mir-4686	0	0.000000	N
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+hsa-mir-4691	0	0.000000	N
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+hsa-mir-4706	1	0.233148	N
+hsa-mir-4707	1	0.233148	N
+hsa-mir-4708	0	0.000000	N
+hsa-mir-4709	4	0.932591	N
+hsa-mir-4710	1	0.233148	N
+hsa-mir-4711	1	0.233148	N
+hsa-mir-4712	0	0.000000	N
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+hsa-mir-4725	2	0.466296	N
+hsa-mir-4726	1	0.233148	N
+hsa-mir-4727	0	0.000000	N
+hsa-mir-4728	13	3.030922	N
+hsa-mir-4729	0	0.000000	N
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+hsa-mir-4733	0	0.000000	N
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+hsa-mir-4741	0	0.000000	N
+hsa-mir-4742	2	0.466296	N
+hsa-mir-4743	0	0.000000	N
+hsa-mir-4744	0	0.000000	N
+hsa-mir-4745	2	0.466296	N
+hsa-mir-4746	6	1.398887	N
+hsa-mir-4747	0	0.000000	N
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+hsa-mir-4750	0	0.000000	N
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+hsa-mir-4758	0	0.000000	N
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+hsa-mir-4763	1	0.233148	N
+hsa-mir-4764	0	0.000000	N
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+hsa-mir-4767	0	0.000000	N
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+hsa-mir-4771-2	0	0.000000	N
+hsa-mir-4772	11	2.564626	N
+hsa-mir-4773-1	0	0.000000	N
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+hsa-mir-4781	1	0.233148	N
+hsa-mir-4782	0	0.000000	N
+hsa-mir-4783	0	0.000000	N
+hsa-mir-4784	2	0.466296	N
+hsa-mir-4785	1	0.233148	N
+hsa-mir-4786	1	0.233148	N
+hsa-mir-4787	0	0.000000	N
+hsa-mir-4788	0	0.000000	N
+hsa-mir-4789	0	0.000000	N
+hsa-mir-4790	1	0.233148	N
+hsa-mir-4791	2	0.466296	N
+hsa-mir-4792	1	0.233148	N
+hsa-mir-4793	0	0.000000	N
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+hsa-mir-4798	0	0.000000	N
+hsa-mir-4799	0	0.000000	N
+hsa-mir-4800	3	0.699444	N
+hsa-mir-4801	0	0.000000	N
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+hsa-mir-4804	0	0.000000	N
+hsa-mir-483	17	3.963513	N
+hsa-mir-484	245	57.121221	N
+hsa-mir-485	14	3.264070	N
+hsa-mir-486-1	226	52.691412	N
+hsa-mir-486-2	251	58.520108	N
+hsa-mir-487a	5	1.165739	N
+hsa-mir-487b	25	5.828696	N
+hsa-mir-488	1	0.233148	N
+hsa-mir-489	2	0.466296	N
+hsa-mir-490	0	0.000000	N
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+hsa-mir-492	1	0.233148	N
+hsa-mir-493	91	21.216454	N
+hsa-mir-494	6	1.398887	N
+hsa-mir-495	25	5.828696	N
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+hsa-mir-497	116	27.045150	N
+hsa-mir-498	0	0.000000	N
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+hsa-mir-499a	1	0.233148	N
+hsa-mir-499b	0	0.000000	N
+hsa-mir-5000	5	1.165739	N
+hsa-mir-5001	4	0.932591	N
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+hsa-mir-5009	0	0.000000	N
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+hsa-mir-500b	10	2.331478	Y
+hsa-mir-501	44	10.258505	N
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+hsa-mir-5011	0	0.000000	N
+hsa-mir-502	21	4.896105	Y
+hsa-mir-503	9	2.098331	N
+hsa-mir-504	4	0.932591	N
+hsa-mir-5047	0	0.000000	N
+hsa-mir-505	82	19.118123	N
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+hsa-mir-5087	2	0.466296	N
+hsa-mir-5088	0	0.000000	N
+hsa-mir-5089	0	0.000000	N
+hsa-mir-509-1	2	0.466296	N
+hsa-mir-509-2	2	0.466296	N
+hsa-mir-509-3	2	0.466296	N
+hsa-mir-5090	1	0.233148	N
+hsa-mir-5091	0	0.000000	N
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+hsa-mir-514a-2	4	0.932591	N
+hsa-mir-514a-3	3	0.699444	N
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+hsa-mir-520b	1	0.233148	Y
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+hsa-mir-527	0	0.000000	N
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+hsa-mir-541	2	0.466296	N
+hsa-mir-542	945	220.324710	N
+hsa-mir-543	4	0.932591	N
+hsa-mir-544a	1	0.233148	N
+hsa-mir-544b	0	0.000000	N
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+hsa-mir-548k	2	0.466296	N
+hsa-mir-548l	1	0.233148	N
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+hsa-mir-548t	4	0.932591	N
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+hsa-mir-549a	1	0.233148	N
+hsa-mir-550a-1	5	1.165739	N
+hsa-mir-550a-2	4	0.932591	N
+hsa-mir-550a-3	1	0.233148	N
+hsa-mir-550b-1	0	0.000000	N
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+hsa-mir-551b	6	1.398887	N
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+hsa-mir-5585	0	0.000000	N
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+hsa-mir-5587	0	0.000000	N
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+hsa-mir-5589	0	0.000000	N
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+hsa-mir-5591	0	0.000000	N
+hsa-mir-561	1	0.233148	N
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+hsa-mir-564	1	0.233148	N
+hsa-mir-566	0	0.000000	N
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+hsa-mir-568	0	0.000000	N
+hsa-mir-5680	1	0.233148	N
+hsa-mir-5681a	0	0.000000	N
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+hsa-mir-5682	0	0.000000	N
+hsa-mir-5683	22	5.129253	N
+hsa-mir-5684	2	0.466296	N
+hsa-mir-5685	1	0.233148	N
+hsa-mir-5687	0	0.000000	N
+hsa-mir-5688	0	0.000000	N
+hsa-mir-5689	0	0.000000	N
+hsa-mir-569	0	0.000000	N
+hsa-mir-5690	0	0.000000	N
+hsa-mir-5691	4	0.932591	N
+hsa-mir-5692a-1	0	0.000000	N
+hsa-mir-5692a-2	0	0.000000	N
+hsa-mir-5692b	0	0.000000	N
+hsa-mir-5692c-1	0	0.000000	N
+hsa-mir-5692c-2	0	0.000000	N
+hsa-mir-5693	0	0.000000	N
+hsa-mir-5694	10	2.331478	N
+hsa-mir-5695	2	0.466296	N
+hsa-mir-5696	2	0.466296	N
+hsa-mir-5697	0	0.000000	N
+hsa-mir-5698	2	0.466296	N
+hsa-mir-5699	3	0.699444	N
+hsa-mir-570	1	0.233148	N
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+hsa-mir-6515	3	0.699444	N
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+hsa-mir-652	178	41.500316	N
+hsa-mir-653	60	13.988870	N
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+hsa-mir-8064	0	0.000000	N
+hsa-mir-8065	0	0.000000	N
+hsa-mir-8066	0	0.000000	N
+hsa-mir-8067	0	0.000000	N
+hsa-mir-8068	0	0.000000	N
+hsa-mir-8069-1	0	0.000000	N
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+hsa-mir-8070	0	0.000000	N
+hsa-mir-8071-1	0	0.000000	N
+hsa-mir-8071-2	0	0.000000	N
+hsa-mir-8072	0	0.000000	N
+hsa-mir-8073	0	0.000000	N
+hsa-mir-8074	0	0.000000	N
+hsa-mir-8075	0	0.000000	N
+hsa-mir-8076	0	0.000000	N
+hsa-mir-8077	0	0.000000	N
+hsa-mir-8078	0	0.000000	N
+hsa-mir-8079	0	0.000000	N
+hsa-mir-8080	0	0.000000	N
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+hsa-mir-8485	0	0.000000	N
+hsa-mir-873	0	0.000000	N
+hsa-mir-874	116	27.045150	N
+hsa-mir-875	0	0.000000	N
+hsa-mir-876	0	0.000000	N
+hsa-mir-877	6	1.398887	N
+hsa-mir-885	2	0.466296	N
+hsa-mir-887	13	3.030922	N
+hsa-mir-888	0	0.000000	N
+hsa-mir-889	101	23.547932	N
+hsa-mir-890	0	0.000000	N
+hsa-mir-891a	3	0.699444	N
+hsa-mir-891b	0	0.000000	N
+hsa-mir-892a	0	0.000000	N
+hsa-mir-892b	0	0.000000	N
+hsa-mir-892c	0	0.000000	N
+hsa-mir-9-1	149	34.739028	N
+hsa-mir-9-2	133	31.008663	N
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+hsa-mir-920	0	0.000000	N
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+hsa-mir-922	0	0.000000	N
+hsa-mir-924	0	0.000000	N
+hsa-mir-92a-1	10844	2528.255187	N
+hsa-mir-92a-2	9974	2325.416565	N
+hsa-mir-92b	805	187.684012	N
+hsa-mir-93	15486	3610.527464	N
+hsa-mir-933	0	0.000000	N
+hsa-mir-934	0	0.000000	N
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+hsa-mir-936	0	0.000000	N
+hsa-mir-937	6	1.398887	N
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+hsa-mir-939	2	0.466296	N
+hsa-mir-940	9	2.098331	N
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+hsa-mir-942	9	2.098331	N
+hsa-mir-943	1	0.233148	N
+hsa-mir-944	1	0.233148	N
+hsa-mir-95	19	4.429809	N
+hsa-mir-9500	0	0.000000	N
+hsa-mir-96	270	62.949917	N
+hsa-mir-98	164	38.236246	N
+hsa-mir-99a	5207	1214.000808	N
+hsa-mir-99b	92612	21592.287842	N

data/gdc_data_organized/81e32f39-3aa0-468b-87ed-dd2eb6165ddf/GOOFS_p_TCGA_b117_118_SNP_N_GenomeWideSNP_6_F11_778124.grch38.seg.v2.txt

@@ -0,0 +1,555 @@
+GDC_Aliquot	Chromosome	Start	End	Num_Probes	Segment_Mean
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+798b4f89-0649-4a76-9b2d-b9536d44883d	19	54819199	54867209	26	0.5415
+798b4f89-0649-4a76-9b2d-b9536d44883d	19	54867244	58586487	2271	0.0258
+798b4f89-0649-4a76-9b2d-b9536d44883d	20	80664	158532	62	0.0235
+798b4f89-0649-4a76-9b2d-b9536d44883d	20	158778	158935	2	-1.6787
+798b4f89-0649-4a76-9b2d-b9536d44883d	20	159104	1579916	1134	0.0445
+798b4f89-0649-4a76-9b2d-b9536d44883d	20	1580141	1613247	46	-0.5957
+798b4f89-0649-4a76-9b2d-b9536d44883d	20	1617300	24755310	18009	0.0105
+798b4f89-0649-4a76-9b2d-b9536d44883d	20	24755870	24779057	20	0.4543
+798b4f89-0649-4a76-9b2d-b9536d44883d	20	24779741	30299006	749	0.0333
+798b4f89-0649-4a76-9b2d-b9536d44883d	20	30299021	30417073	28	0.4502
+798b4f89-0649-4a76-9b2d-b9536d44883d	20	31247246	64324800	22295	0.0177
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	10354168	14005515	326	0.1972
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	14006460	15609027	1139	0.0148
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	15610219	15754501	131	-0.157
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	15758051	18263926	1655	0.012
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	18263989	18268434	8	-0.6035
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	18268813	18683769	287	0.0162
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	18685360	18708616	27	0.607
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	18709557	22135730	2634	-0.0013
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	22135874	23522455	1053	-0.0578
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	23522647	23764047	200	0.0359
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	23764806	23765372	2	-1.2387
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	23765537	23780211	17	0.117
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	23780248	23780711	4	-0.9415
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	23785677	31368147	5617	0.0139
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	31368602	31368793	2	-2.0125
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	31369506	45348615	9990	0.0197
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	45355558	45665804	162	0.1782
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	45670561	46545208	474	0.0354
+798b4f89-0649-4a76-9b2d-b9536d44883d	21	46547064	46677045	127	0.1327
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	15294547	17012476	299	0.1155
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	17014661	17025649	7	0.9367
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	17029830	17145030	99	0.0822
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	17145775	17912475	513	0.0073
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	17913111	17913372	2	1.0482
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	17914354	18146261	196	0.0321
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	18146386	22114208	2001	0.1154
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	22119549	22120255	6	-0.8298
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	22127104	22398127	332	0.1133
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	22398345	22398545	4	1.4274
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	22402989	24006290	944	0.1052
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	24008384	25289870	819	0.0045
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	25293106	25377451	97	0.2315
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	25377543	36042607	8180	0.0169
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	36043461	36079634	24	0.3865
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	36082719	38952895	1702	0.034
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	38954034	38974327	18	0.4306
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	38974344	48407701	6403	0.0194
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	48408100	48408665	3	-1.2478
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	48409291	49015003	487	0.0178
+798b4f89-0649-4a76-9b2d-b9536d44883d	22	49015577	50796027	1121	0.1018
+798b4f89-0649-4a76-9b2d-b9536d44883d	X	251810	48001197	28964	0.0068
+798b4f89-0649-4a76-9b2d-b9536d44883d	X	48020763	48141867	77	-0.873
+798b4f89-0649-4a76-9b2d-b9536d44883d	X	48144497	58163256	4250	0.0253
+798b4f89-0649-4a76-9b2d-b9536d44883d	X	58165813	62969579	172	0.1861
+798b4f89-0649-4a76-9b2d-b9536d44883d	X	62974244	88479267	12448	0.0185
+798b4f89-0649-4a76-9b2d-b9536d44883d	X	88479516	88492347	12	-0.6209
+798b4f89-0649-4a76-9b2d-b9536d44883d	X	88492378	155952689	37676	0.0156
+798b4f89-0649-4a76-9b2d-b9536d44883d	Y	2782397	6233384	784	-2.2458
+798b4f89-0649-4a76-9b2d-b9536d44883d	Y	6249869	9330531	1444	-2.7627
+798b4f89-0649-4a76-9b2d-b9536d44883d	Y	9332936	9554275	25	-4.3936
+798b4f89-0649-4a76-9b2d-b9536d44883d	Y	9554586	13478396	1012	-2.5941
+798b4f89-0649-4a76-9b2d-b9536d44883d	Y	13478462	13482643	3	-7.8202
+798b4f89-0649-4a76-9b2d-b9536d44883d	Y	13483009	25971733	3198	-2.701
+798b4f89-0649-4a76-9b2d-b9536d44883d	Y	26077669	56872112	172	-2.2387

data/gdc_data_organized/81e32f39-3aa0-468b-87ed-dd2eb6165ddf/e1f1e3de-a466-4cdf-89d2-3f5c0e86a304.mirbase21.mirnas.quantification.txt

@@ -0,0 +1,1882 @@
+miRNA_ID	read_count	reads_per_million_miRNA_mapped	cross-mapped
+hsa-let-7a-1	18315	9772.398882	N
+hsa-let-7a-2	18429	9833.226263	N
+hsa-let-7a-3	18215	9719.041531	N
+hsa-let-7b	117240	62556.158612	N
+hsa-let-7c	804	428.993104	N
+hsa-let-7d	1945	1037.800482	N
+hsa-let-7e	2170	1157.854522	N
+hsa-let-7f-1	2751	1467.860733	N
+hsa-let-7f-2	2735	1459.323557	N
+hsa-let-7g	1612	860.120502	N
+hsa-let-7i	1327	708.052051	N
+hsa-mir-1-1	7	3.735015	N
+hsa-mir-1-2	10	5.335735	N
+hsa-mir-100	2061	1099.695009	N
+hsa-mir-101-1	6541	3490.104346	N
+hsa-mir-101-2	6716	3583.479710	N
+hsa-mir-103a-1	14715	7851.534237	Y
+hsa-mir-103a-2	14358	7661.048493	Y
+hsa-mir-103b-1	0	0.000000	N
+hsa-mir-103b-2	0	0.000000	N
+hsa-mir-105-1	0	0.000000	N
+hsa-mir-105-2	0	0.000000	N
+hsa-mir-106a	16	8.537176	Y
+hsa-mir-106b	1363	727.260698	N
+hsa-mir-107	179	95.509659	Y
+hsa-mir-10a	472386	252052.657303	N
+hsa-mir-10b	53210	28391.446603	N
+hsa-mir-1178	0	0.000000	N
+hsa-mir-1179	2	1.067147	N
+hsa-mir-1180	98	52.290204	N
+hsa-mir-1181	0	0.000000	N
+hsa-mir-1182	0	0.000000	N
+hsa-mir-1183	0	0.000000	N
+hsa-mir-1184-1	0	0.000000	N
+hsa-mir-1184-2	0	0.000000	N
+hsa-mir-1184-3	0	0.000000	N
+hsa-mir-1185-1	0	0.000000	N
+hsa-mir-1185-2	0	0.000000	N
+hsa-mir-1193	0	0.000000	N
+hsa-mir-1197	0	0.000000	N
+hsa-mir-1199	0	0.000000	N
+hsa-mir-1200	0	0.000000	N
+hsa-mir-1202	0	0.000000	N
+hsa-mir-1203	0	0.000000	N
+hsa-mir-1204	0	0.000000	N
+hsa-mir-1205	0	0.000000	N
+hsa-mir-1206	0	0.000000	N
+hsa-mir-1207	0	0.000000	N
+hsa-mir-1208	0	0.000000	N
+hsa-mir-122	0	0.000000	N
+hsa-mir-1224	1	0.533574	N
+hsa-mir-1225	0	0.000000	N
+hsa-mir-1226	32	17.074352	N
+hsa-mir-1227	2	1.067147	N
+hsa-mir-1228	3	1.600721	N
+hsa-mir-1229	28	14.940058	N
+hsa-mir-1231	1	0.533574	N
+hsa-mir-1233-1	0	0.000000	N
+hsa-mir-1233-2	0	0.000000	N
+hsa-mir-1234	0	0.000000	N
+hsa-mir-1236	1	0.533574	N
+hsa-mir-1237	1	0.533574	N
+hsa-mir-1238	0	0.000000	N
+hsa-mir-124-1	7	3.735015	N
+hsa-mir-124-2	13	6.936456	N
+hsa-mir-124-3	10	5.335735	N
+hsa-mir-1243	0	0.000000	N
+hsa-mir-1244-1	0	0.000000	N
+hsa-mir-1244-2	0	0.000000	N
+hsa-mir-1244-3	0	0.000000	N
+hsa-mir-1244-4	0	0.000000	N
+hsa-mir-1245a	6	3.201441	N
+hsa-mir-1245b	0	0.000000	N
+hsa-mir-1246	0	0.000000	N
+hsa-mir-1247	34	18.141499	N
+hsa-mir-1248	4	2.134294	N
+hsa-mir-1249	7	3.735015	N
+hsa-mir-1250	0	0.000000	N
+hsa-mir-1251	0	0.000000	N
+hsa-mir-1252	0	0.000000	N
+hsa-mir-1253	0	0.000000	N
+hsa-mir-1254-1	3	1.600721	N
+hsa-mir-1254-2	0	0.000000	N
+hsa-mir-1255a	0	0.000000	N
+hsa-mir-1255b-1	0	0.000000	N
+hsa-mir-1255b-2	0	0.000000	N
+hsa-mir-1256	0	0.000000	N
+hsa-mir-1257	0	0.000000	N
+hsa-mir-1258	0	0.000000	N
+hsa-mir-125a	3246	1731.979622	N
+hsa-mir-125b-1	265	141.396981	N
+hsa-mir-125b-2	283	151.001304	N
+hsa-mir-126	5691	3036.566860	N
+hsa-mir-1260a	0	0.000000	N
+hsa-mir-1260b	0	0.000000	N
+hsa-mir-1261	0	0.000000	N
+hsa-mir-1262	1	0.533574	N
+hsa-mir-1263	0	0.000000	N
+hsa-mir-1264	0	0.000000	N
+hsa-mir-1265	0	0.000000	N
+hsa-mir-1266	50	26.678676	N
+hsa-mir-1267	0	0.000000	N
+hsa-mir-1268a	0	0.000000	N
+hsa-mir-1268b	0	0.000000	N
+hsa-mir-1269a	0	0.000000	N
+hsa-mir-1269b	0	0.000000	N
+hsa-mir-127	1160	618.945275	N
+hsa-mir-1270	13	6.936456	N
+hsa-mir-1271	13	6.936456	N
+hsa-mir-1272	0	0.000000	N
+hsa-mir-1273a	0	0.000000	N
+hsa-mir-1273c	0	0.000000	N
+hsa-mir-1273d	0	0.000000	N
+hsa-mir-1273e	0	0.000000	N
+hsa-mir-1273f	0	0.000000	N
+hsa-mir-1273g	0	0.000000	N
+hsa-mir-1273h	0	0.000000	N
+hsa-mir-1275	8	4.268588	N
+hsa-mir-1276	0	0.000000	N
+hsa-mir-1277	1	0.533574	N
+hsa-mir-1278	0	0.000000	N
+hsa-mir-1279	0	0.000000	N
+hsa-mir-128-1	179	95.509659	N
+hsa-mir-128-2	123	65.629542	N
+hsa-mir-1281	0	0.000000	N
+hsa-mir-1282	0	0.000000	N
+hsa-mir-1283-1	0	0.000000	N
+hsa-mir-1283-2	0	0.000000	N
+hsa-mir-1284	6	3.201441	N
+hsa-mir-1285-1	0	0.000000	N
+hsa-mir-1285-2	0	0.000000	N
+hsa-mir-1286	0	0.000000	N
+hsa-mir-1287	164	87.506056	N
+hsa-mir-1288	0	0.000000	N
+hsa-mir-1289-1	0	0.000000	N
+hsa-mir-1289-2	0	0.000000	N
+hsa-mir-129-1	0	0.000000	N
+hsa-mir-129-2	1	0.533574	N
+hsa-mir-1290	0	0.000000	N
+hsa-mir-1291	5	2.667868	N
+hsa-mir-1292	3	1.600721	N
+hsa-mir-1293	0	0.000000	N
+hsa-mir-1294	0	0.000000	N
+hsa-mir-1295a	2	1.067147	N
+hsa-mir-1295b	0	0.000000	N
+hsa-mir-1296	12	6.402882	N
+hsa-mir-1297	0	0.000000	N
+hsa-mir-1298	0	0.000000	N
+hsa-mir-1299	0	0.000000	N
+hsa-mir-1301	76	40.551587	N
+hsa-mir-1302-1	0	0.000000	N
+hsa-mir-1302-10	0	0.000000	N
+hsa-mir-1302-11	0	0.000000	N
+hsa-mir-1302-2	0	0.000000	N
+hsa-mir-1302-3	0	0.000000	N
+hsa-mir-1302-4	0	0.000000	N
+hsa-mir-1302-5	0	0.000000	N
+hsa-mir-1302-6	0	0.000000	N
+hsa-mir-1302-7	0	0.000000	N
+hsa-mir-1302-8	0	0.000000	N
+hsa-mir-1302-9	0	0.000000	N
+hsa-mir-1303	0	0.000000	N
+hsa-mir-1304	0	0.000000	N
+hsa-mir-1305	0	0.000000	N
+hsa-mir-1306	65	34.682278	N
+hsa-mir-1307	5391	2876.494806	N
+hsa-mir-130a	35	18.675073	N
+hsa-mir-130b	112	59.760233	N
+hsa-mir-132	176	93.908938	N
+hsa-mir-1321	0	0.000000	N
+hsa-mir-1322	0	0.000000	N
+hsa-mir-1323	0	0.000000	N
+hsa-mir-1324	0	0.000000	N
+hsa-mir-133a-1	11	5.869309	Y
+hsa-mir-133a-2	15	8.003603	Y
+hsa-mir-133b	10	5.335735	Y
+hsa-mir-134	685	365.497856	N
+hsa-mir-1343	4	2.134294	N
+hsa-mir-135a-1	0	0.000000	N
+hsa-mir-135a-2	1	0.533574	N
+hsa-mir-135b	3	1.600721	N
+hsa-mir-136	89	47.488043	N
+hsa-mir-137	0	0.000000	N
+hsa-mir-138-1	0	0.000000	N
+hsa-mir-138-2	5	2.667868	N
+hsa-mir-139	34	18.141499	N
+hsa-mir-140	418	223.033728	N
+hsa-mir-141	3048	1626.332066	N
+hsa-mir-142	7938	4235.506543	N
+hsa-mir-143	22907	12222.568452	N
+hsa-mir-144	91	48.555190	N
+hsa-mir-145	1374	733.130006	N
+hsa-mir-1468	2	1.067147	N
+hsa-mir-1469	0	0.000000	N
+hsa-mir-146a	237	126.456922	N
+hsa-mir-146b	859	458.339647	N
+hsa-mir-1470	0	0.000000	N
+hsa-mir-1471	0	0.000000	N
+hsa-mir-147a	0	0.000000	N
+hsa-mir-147b	13	6.936456	N
+hsa-mir-148a	130456	69607.866154	N
+hsa-mir-148b	1042	555.983600	N
+hsa-mir-149	1262	673.369773	N
+hsa-mir-150	1407	750.737932	N
+hsa-mir-151a	5713	3048.305477	N
+hsa-mir-151b	9	4.802162	N
+hsa-mir-152	385	205.425802	N
+hsa-mir-153-1	2	1.067147	N
+hsa-mir-153-2	30	16.007205	N
+hsa-mir-1537	1	0.533574	N
+hsa-mir-1538	0	0.000000	N
+hsa-mir-1539	0	0.000000	N
+hsa-mir-154	5	2.667868	N
+hsa-mir-155	723	385.773650	N
+hsa-mir-1587	0	0.000000	N
+hsa-mir-15a	392	209.160817	N
+hsa-mir-15b	395	210.761537	N
+hsa-mir-16-1	1472	785.420210	N
+hsa-mir-16-2	1541	822.236783	N
+hsa-mir-17	662	353.225665	Y
+hsa-mir-181a-1	434	231.570904	N
+hsa-mir-181a-2	709	378.303620	N
+hsa-mir-181b-1	143	76.301012	N
+hsa-mir-181b-2	76	40.551587	N
+hsa-mir-181c	100	53.357351	N
+hsa-mir-181d	26	13.872911	N
+hsa-mir-182	29365	15668.386196	N
+hsa-mir-1825	0	0.000000	N
+hsa-mir-1827	0	0.000000	N
+hsa-mir-183	15058	8034.549952	N
+hsa-mir-184	6	3.201441	N
+hsa-mir-185	82	43.753028	N
+hsa-mir-186	814	434.328839	N
+hsa-mir-187	34	18.141499	N
+hsa-mir-188	22	11.738617	N
+hsa-mir-18a	11	5.869309	N
+hsa-mir-18b	0	0.000000	N
+hsa-mir-1908	0	0.000000	N
+hsa-mir-1909	0	0.000000	N
+hsa-mir-190a	7	3.735015	N
+hsa-mir-190b	14	7.470029	N
+hsa-mir-191	3715	1982.225599	N
+hsa-mir-1910	1	0.533574	N
+hsa-mir-1911	0	0.000000	N
+hsa-mir-1912	0	0.000000	N
+hsa-mir-1913	0	0.000000	N
+hsa-mir-1914	2	1.067147	N
+hsa-mir-1915	0	0.000000	N
+hsa-mir-192	6427	3429.276965	Y
+hsa-mir-193a	755	402.848002	N
+hsa-mir-193b	35	18.675073	N
+hsa-mir-194-1	339	180.881421	N
+hsa-mir-194-2	378	201.690788	N
+hsa-mir-195	87	46.420896	N
+hsa-mir-196a-1	90	48.021616	N
+hsa-mir-196a-2	108	57.625939	N
+hsa-mir-196b	504	268.921050	N
+hsa-mir-197	1052	561.319335	N
+hsa-mir-1972-1	0	0.000000	N
+hsa-mir-1972-2	0	0.000000	N
+hsa-mir-1973	0	0.000000	N
+hsa-mir-1976	19	10.137897	N
+hsa-mir-198	0	0.000000	N
+hsa-mir-199a-1	2468	1316.859429	Y
+hsa-mir-199a-2	4222	2252.747370	Y
+hsa-mir-199b	5762	3074.450579	Y
+hsa-mir-19a	54	28.812970	N
+hsa-mir-19b-1	87	46.420896	N
+hsa-mir-19b-2	88	46.954469	N
+hsa-mir-200a	3285	1752.788989	N
+hsa-mir-200b	1853	988.711719	N
+hsa-mir-200c	16957	9047.806052	N
+hsa-mir-202	0	0.000000	N
+hsa-mir-203a	78	41.618734	N
+hsa-mir-203b	4	2.134294	N
+hsa-mir-204	0	0.000000	N
+hsa-mir-205	30	16.007205	N
+hsa-mir-2052	0	0.000000	N
+hsa-mir-2053	0	0.000000	N
+hsa-mir-2054	0	0.000000	N
+hsa-mir-206	0	0.000000	N
+hsa-mir-208a	0	0.000000	N
+hsa-mir-208b	0	0.000000	N
+hsa-mir-20a	148	78.968880	N
+hsa-mir-20b	9	4.802162	N
+hsa-mir-21	209839	111964.532301	N
+hsa-mir-210	1255	669.634758	N
+hsa-mir-211	0	0.000000	N
+hsa-mir-2110	3	1.600721	N
+hsa-mir-2113	0	0.000000	N
+hsa-mir-2114	1	0.533574	N
+hsa-mir-2115	0	0.000000	N
+hsa-mir-2116	2	1.067147	N
+hsa-mir-2117	0	0.000000	N
+hsa-mir-212	41	21.876514	N
+hsa-mir-214	30	16.007205	N
+hsa-mir-215	96	51.223057	Y
+hsa-mir-216a	0	0.000000	N
+hsa-mir-216b	0	0.000000	N
+hsa-mir-217	28	14.940058	N
+hsa-mir-218-1	52	27.745823	N
+hsa-mir-218-2	46	24.544382	N
+hsa-mir-219a-1	5	2.667868	N
+hsa-mir-219a-2	1	0.533574	N
+hsa-mir-219b	1	0.533574	N
+hsa-mir-22	122104	65151.460177	N
+hsa-mir-221	76	40.551587	N
+hsa-mir-222	54	28.812970	N
+hsa-mir-223	104	55.491645	N
+hsa-mir-224	11	5.869309	N
+hsa-mir-2276	0	0.000000	N
+hsa-mir-2277	5	2.667868	N
+hsa-mir-2278	0	0.000000	N
+hsa-mir-2355	53	28.279396	N
+hsa-mir-2392	0	0.000000	N
+hsa-mir-23a	4716	2516.332685	Y
+hsa-mir-23b	1096	584.796570	Y
+hsa-mir-23c	0	0.000000	N
+hsa-mir-24-1	1307	697.380581	N
+hsa-mir-24-2	1335	712.320639	N
+hsa-mir-2467	1	0.533574	N
+hsa-mir-25	14229	7592.217510	N
+hsa-mir-2681	0	0.000000	N
+hsa-mir-2682	0	0.000000	N
+hsa-mir-26a-1	1497	798.759548	N
+hsa-mir-26a-2	1533	817.968195	N
+hsa-mir-26b	2939	1568.172553	N
+hsa-mir-27a	1687	900.138516	Y
+hsa-mir-27b	561	299.334741	Y
+hsa-mir-28	2289	1221.349770	N
+hsa-mir-2861	0	0.000000	N
+hsa-mir-2909	0	0.000000	N
+hsa-mir-296	6	3.201441	N
+hsa-mir-297	0	0.000000	N
+hsa-mir-298	0	0.000000	N
+hsa-mir-299	5	2.667868	N
+hsa-mir-29a	4514	2408.550836	N
+hsa-mir-29b-1	1231	656.828994	Y
+hsa-mir-29b-2	1900	1013.789674	N
+hsa-mir-29c	4177	2228.736562	Y
+hsa-mir-300	0	0.000000	N
+hsa-mir-301a	115	61.360954	N
+hsa-mir-301b	4	2.134294	N
+hsa-mir-302a	0	0.000000	N
+hsa-mir-302b	0	0.000000	N
+hsa-mir-302c	0	0.000000	N
+hsa-mir-302d	0	0.000000	N
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+hsa-mir-302f	0	0.000000	N
+hsa-mir-3064	1	0.533574	N
+hsa-mir-3065	344	183.549288	N
+hsa-mir-3074	71	37.883719	N
+hsa-mir-30a	124782	66580.370044	Y
+hsa-mir-30b	1769	943.891544	Y
+hsa-mir-30c-1	710	378.837194	Y
+hsa-mir-30c-2	763	407.116590	Y
+hsa-mir-30d	26339	14053.792747	N
+hsa-mir-30e	20173	10763.778469	Y
+hsa-mir-31	1	0.533574	N
+hsa-mir-3115	0	0.000000	N
+hsa-mir-3116-1	0	0.000000	N
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+hsa-mir-3117	0	0.000000	N
+hsa-mir-3118-1	0	0.000000	N
+hsa-mir-3118-2	0	0.000000	N
+hsa-mir-3118-3	0	0.000000	N
+hsa-mir-3118-4	0	0.000000	N
+hsa-mir-3119-1	0	0.000000	N
+hsa-mir-3119-2	0	0.000000	N
+hsa-mir-3120	1	0.533574	N
+hsa-mir-3121	0	0.000000	N
+hsa-mir-3122	0	0.000000	N
+hsa-mir-3123	0	0.000000	N
+hsa-mir-3124	0	0.000000	N
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+hsa-mir-3126	0	0.000000	N
+hsa-mir-3127	51	27.212249	N
+hsa-mir-3128	0	0.000000	N
+hsa-mir-3129	0	0.000000	N
+hsa-mir-3130-1	4	2.134294	N
+hsa-mir-3130-2	5	2.667868	N
+hsa-mir-3131	0	0.000000	N
+hsa-mir-3132	0	0.000000	N
+hsa-mir-3133	0	0.000000	N
+hsa-mir-3134	0	0.000000	N
+hsa-mir-3135a	0	0.000000	N
+hsa-mir-3135b	0	0.000000	N
+hsa-mir-3136	6	3.201441	N
+hsa-mir-3137	0	0.000000	N
+hsa-mir-3138	0	0.000000	N
+hsa-mir-3139	0	0.000000	N
+hsa-mir-3140	1	0.533574	N
+hsa-mir-3141	0	0.000000	N
+hsa-mir-3142	0	0.000000	N
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+hsa-mir-3144	0	0.000000	N
+hsa-mir-3145	0	0.000000	N
+hsa-mir-3146	0	0.000000	N
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+hsa-mir-3149	0	0.000000	N
+hsa-mir-3150a	1	0.533574	N
+hsa-mir-3150b	2	1.067147	N
+hsa-mir-3151	0	0.000000	N
+hsa-mir-3152	0	0.000000	N
+hsa-mir-3153	0	0.000000	N
+hsa-mir-3154	0	0.000000	N
+hsa-mir-3155a	0	0.000000	N
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+hsa-mir-3156-2	2	1.067147	N
+hsa-mir-3156-3	0	0.000000	N
+hsa-mir-3157	0	0.000000	N
+hsa-mir-3158-1	1	0.533574	N
+hsa-mir-3158-2	0	0.000000	N
+hsa-mir-3159	0	0.000000	N
+hsa-mir-3160-1	0	0.000000	N
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+hsa-mir-3169	0	0.000000	N
+hsa-mir-3170	11	5.869309	N
+hsa-mir-3171	0	0.000000	N
+hsa-mir-3173	2	1.067147	N
+hsa-mir-3174	1	0.533574	N
+hsa-mir-3175	0	0.000000	N
+hsa-mir-3176	2	1.067147	N
+hsa-mir-3177	1	0.533574	N
+hsa-mir-3178	1	0.533574	N
+hsa-mir-3179-1	0	0.000000	N
+hsa-mir-3179-2	0	0.000000	N
+hsa-mir-3179-3	0	0.000000	N
+hsa-mir-3179-4	0	0.000000	N
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+hsa-mir-3180-2	0	0.000000	N
+hsa-mir-3180-3	0	0.000000	N
+hsa-mir-3180-4	0	0.000000	N
+hsa-mir-3180-5	0	0.000000	N
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+hsa-mir-3199-2	2	1.067147	N
+hsa-mir-32	98	52.290204	N
+hsa-mir-3200	47	25.077955	N
+hsa-mir-3201	0	0.000000	N
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+hsa-mir-320a	1093	583.195849	Y
+hsa-mir-320b-1	11	5.869309	Y
+hsa-mir-320b-2	18	9.604323	Y
+hsa-mir-320c-1	0	0.000000	N
+hsa-mir-320c-2	1	0.533574	N
+hsa-mir-320d-1	1	0.533574	N
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+hsa-mir-320e	0	0.000000	N
+hsa-mir-323a	2	1.067147	N
+hsa-mir-323b	23	12.272191	N
+hsa-mir-324	379	202.224361	N
+hsa-mir-325	0	0.000000	N
+hsa-mir-326	100	53.357351	N
+hsa-mir-328	528	281.726815	N
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+hsa-mir-330	91	48.555190	N
+hsa-mir-331	212	113.117585	N
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+hsa-mir-337	91	48.555190	N
+hsa-mir-338	236	125.923349	N
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+hsa-mir-33a	33	17.607926	N
+hsa-mir-33b	76	40.551587	N
+hsa-mir-340	31	16.540779	N
+hsa-mir-342	6592	3517.316595	N
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+hsa-mir-34a	434	231.570904	N
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+hsa-mir-3609	1	0.533574	N
+hsa-mir-361	619	330.282004	N
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+hsa-mir-362	18	9.604323	N
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+hsa-mir-375	14814	7904.358015	N
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+hsa-mir-376a-2	2	1.067147	N
+hsa-mir-376b	2	1.067147	Y
+hsa-mir-376c	4	2.134294	Y
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+hsa-mir-378a	244	130.191937	N
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+hsa-mir-378j	0	0.000000	N
+hsa-mir-379	613	327.080563	N
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+hsa-mir-382	44	23.477235	N
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+hsa-mir-3910-2	0	0.000000	N
+hsa-mir-3911	0	0.000000	N
+hsa-mir-3912	1	0.533574	N
+hsa-mir-3913-1	1	0.533574	N
+hsa-mir-3913-2	1	0.533574	N
+hsa-mir-3914-1	0	0.000000	N
+hsa-mir-3914-2	0	0.000000	N
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+hsa-mir-3921	0	0.000000	N
+hsa-mir-3922	3	1.600721	N
+hsa-mir-3923	0	0.000000	N
+hsa-mir-3924	0	0.000000	N
+hsa-mir-3925	0	0.000000	N
+hsa-mir-3926-1	2	1.067147	N
+hsa-mir-3926-2	0	0.000000	N
+hsa-mir-3927	0	0.000000	N
+hsa-mir-3928	23	12.272191	N
+hsa-mir-3929	0	0.000000	N
+hsa-mir-3934	4	2.134294	N
+hsa-mir-3935	0	0.000000	N
+hsa-mir-3936	0	0.000000	N
+hsa-mir-3937	0	0.000000	N
+hsa-mir-3938	0	0.000000	N
+hsa-mir-3939	1	0.533574	N
+hsa-mir-3940	0	0.000000	N
+hsa-mir-3941	2	1.067147	N
+hsa-mir-3942	0	0.000000	N
+hsa-mir-3943	0	0.000000	N
+hsa-mir-3944	2	1.067147	N
+hsa-mir-3945	0	0.000000	N
+hsa-mir-3960	0	0.000000	N
+hsa-mir-3972	0	0.000000	N
+hsa-mir-3973	0	0.000000	N
+hsa-mir-3974	0	0.000000	N
+hsa-mir-3975	0	0.000000	N
+hsa-mir-3976	0	0.000000	N
+hsa-mir-3977	0	0.000000	N
+hsa-mir-3978	0	0.000000	N
+hsa-mir-409	44	23.477235	N
+hsa-mir-410	4	2.134294	N
+hsa-mir-411	5	2.667868	N
+hsa-mir-412	2	1.067147	N
+hsa-mir-421	3	1.600721	N
+hsa-mir-422a	0	0.000000	N
+hsa-mir-423	464	247.578110	N
+hsa-mir-424	233	124.322628	N
+hsa-mir-425	2957	1577.776877	N
+hsa-mir-4251	0	0.000000	N
+hsa-mir-4252	0	0.000000	N
+hsa-mir-4253	0	0.000000	N
+hsa-mir-4254	1	0.533574	N
+hsa-mir-4255	0	0.000000	N
+hsa-mir-4256	0	0.000000	N
+hsa-mir-4257	0	0.000000	N
+hsa-mir-4258	0	0.000000	N
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+hsa-mir-4447	0	0.000000	N
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+hsa-mir-4637	0	0.000000	N
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+hsa-mir-4785	0	0.000000	N
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+hsa-mir-4787	5	2.667868	N
+hsa-mir-4788	0	0.000000	N
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+hsa-mir-4804	0	0.000000	N
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+hsa-mir-493	25	13.339338	N
+hsa-mir-494	4	2.134294	N
+hsa-mir-495	8	4.268588	N
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+hsa-mir-5004	0	0.000000	N
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+hsa-mir-500a	381	203.291508	Y
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+hsa-mir-502	19	10.137897	Y
+hsa-mir-503	9	4.802162	N
+hsa-mir-504	12	6.402882	N
+hsa-mir-5047	0	0.000000	N
+hsa-mir-505	77	41.085160	N
+hsa-mir-506	2	1.067147	N
+hsa-mir-507	0	0.000000	N
+hsa-mir-508	9	4.802162	N
+hsa-mir-5087	0	0.000000	N
+hsa-mir-5088	0	0.000000	N
+hsa-mir-5089	1	0.533574	N
+hsa-mir-509-1	1	0.533574	N
+hsa-mir-509-2	4	2.134294	N
+hsa-mir-509-3	7	3.735015	N
+hsa-mir-5090	2	1.067147	N
+hsa-mir-5091	1	0.533574	N
+hsa-mir-5092	0	0.000000	N
+hsa-mir-5093	0	0.000000	N
+hsa-mir-5094	1	0.533574	N
+hsa-mir-5095	0	0.000000	N
+hsa-mir-5096	0	0.000000	N
+hsa-mir-510	0	0.000000	N
+hsa-mir-5100	0	0.000000	N
+hsa-mir-511	12	6.402882	N
+hsa-mir-512-1	1	0.533574	N
+hsa-mir-512-2	0	0.000000	N
+hsa-mir-513a-1	0	0.000000	N
+hsa-mir-513a-2	0	0.000000	N
+hsa-mir-513b	0	0.000000	N
+hsa-mir-513c	0	0.000000	N
+hsa-mir-514a-1	0	0.000000	N
+hsa-mir-514a-2	0	0.000000	N
+hsa-mir-514a-3	0	0.000000	N
+hsa-mir-514b	0	0.000000	N
+hsa-mir-515-1	0	0.000000	N
+hsa-mir-515-2	0	0.000000	N
+hsa-mir-516a-1	1	0.533574	N
+hsa-mir-516a-2	0	0.000000	N
+hsa-mir-516b-1	0	0.000000	N
+hsa-mir-516b-2	0	0.000000	N
+hsa-mir-517a	0	0.000000	N
+hsa-mir-517b	0	0.000000	N
+hsa-mir-517c	0	0.000000	N
+hsa-mir-5186	0	0.000000	N
+hsa-mir-5187	2	1.067147	N
+hsa-mir-5188	1	0.533574	N
+hsa-mir-5189	0	0.000000	N
+hsa-mir-518a-1	0	0.000000	N
+hsa-mir-518a-2	0	0.000000	N
+hsa-mir-518b	0	0.000000	N
+hsa-mir-518c	1	0.533574	N
+hsa-mir-518d	0	0.000000	N
+hsa-mir-518e	0	0.000000	N
+hsa-mir-518f	0	0.000000	N
+hsa-mir-5190	0	0.000000	N
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+hsa-mir-519a-1	0	0.000000	N
+hsa-mir-519a-2	1	0.533574	Y
+hsa-mir-519b	0	0.000000	N
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+hsa-mir-519d	0	0.000000	N
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+hsa-mir-520a	1	0.533574	N
+hsa-mir-520b	1	0.533574	Y
+hsa-mir-520c	0	0.000000	N
+hsa-mir-520d	0	0.000000	N
+hsa-mir-520e	3	1.600721	N
+hsa-mir-520f	0	0.000000	N
+hsa-mir-520g	1	0.533574	Y
+hsa-mir-520h	1	0.533574	Y
+hsa-mir-521-1	0	0.000000	N
+hsa-mir-521-2	0	0.000000	N
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+hsa-mir-523	0	0.000000	N
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+hsa-mir-525	2	1.067147	N
+hsa-mir-526a-1	0	0.000000	N
+hsa-mir-526a-2	0	0.000000	N
+hsa-mir-526b	2	1.067147	N
+hsa-mir-527	0	0.000000	N
+hsa-mir-532	1571	838.243988	N
+hsa-mir-539	23	12.272191	N
+hsa-mir-541	0	0.000000	N
+hsa-mir-542	174	92.841791	N
+hsa-mir-543	2	1.067147	N
+hsa-mir-544a	1	0.533574	N
+hsa-mir-544b	0	0.000000	N
+hsa-mir-545	1	0.533574	N
+hsa-mir-548a-1	0	0.000000	N
+hsa-mir-548a-2	0	0.000000	N
+hsa-mir-548a-3	0	0.000000	N
+hsa-mir-548aa-1	0	0.000000	N
+hsa-mir-548aa-2	0	0.000000	N
+hsa-mir-548ab	0	0.000000	N
+hsa-mir-548ac	0	0.000000	N
+hsa-mir-548ad	0	0.000000	N
+hsa-mir-548ae-1	0	0.000000	N
+hsa-mir-548ae-2	0	0.000000	N
+hsa-mir-548ag-1	0	0.000000	N
+hsa-mir-548ag-2	0	0.000000	N
+hsa-mir-548ah	0	0.000000	N
+hsa-mir-548ai	0	0.000000	N
+hsa-mir-548aj-1	0	0.000000	N
+hsa-mir-548aj-2	0	0.000000	N
+hsa-mir-548ak	0	0.000000	N
+hsa-mir-548al	0	0.000000	N
+hsa-mir-548am	0	0.000000	N
+hsa-mir-548an	0	0.000000	N
+hsa-mir-548ao	0	0.000000	N
+hsa-mir-548ap	0	0.000000	N
+hsa-mir-548aq	0	0.000000	N
+hsa-mir-548ar	0	0.000000	N
+hsa-mir-548as	0	0.000000	N
+hsa-mir-548at	0	0.000000	N
+hsa-mir-548au	3	1.600721	N
+hsa-mir-548av	0	0.000000	N
+hsa-mir-548aw	0	0.000000	N
+hsa-mir-548ax	0	0.000000	N
+hsa-mir-548ay	0	0.000000	N
+hsa-mir-548az	0	0.000000	N
+hsa-mir-548b	2	1.067147	N
+hsa-mir-548ba	0	0.000000	N
+hsa-mir-548bb	0	0.000000	N
+hsa-mir-548c	0	0.000000	N
+hsa-mir-548d-1	0	0.000000	N
+hsa-mir-548d-2	0	0.000000	N
+hsa-mir-548e	1	0.533574	N
+hsa-mir-548f-1	2	1.067147	N
+hsa-mir-548f-2	0	0.000000	N
+hsa-mir-548f-3	0	0.000000	N
+hsa-mir-548f-4	0	0.000000	N
+hsa-mir-548f-5	0	0.000000	N
+hsa-mir-548g	0	0.000000	N
+hsa-mir-548h-1	0	0.000000	N
+hsa-mir-548h-2	0	0.000000	N
+hsa-mir-548h-3	0	0.000000	N
+hsa-mir-548h-4	0	0.000000	N
+hsa-mir-548h-5	0	0.000000	N
+hsa-mir-548i-1	0	0.000000	N
+hsa-mir-548i-2	0	0.000000	N
+hsa-mir-548i-3	0	0.000000	N
+hsa-mir-548i-4	0	0.000000	N
+hsa-mir-548j	1	0.533574	N
+hsa-mir-548k	0	0.000000	N
+hsa-mir-548l	0	0.000000	N
+hsa-mir-548m	0	0.000000	N
+hsa-mir-548n	0	0.000000	N
+hsa-mir-548o	0	0.000000	N
+hsa-mir-548o-2	2	1.067147	N
+hsa-mir-548p	0	0.000000	N
+hsa-mir-548q	0	0.000000	N
+hsa-mir-548s	0	0.000000	N
+hsa-mir-548t	1	0.533574	N
+hsa-mir-548u	0	0.000000	N
+hsa-mir-548v	3	1.600721	N
+hsa-mir-548w	0	0.000000	N
+hsa-mir-548x	0	0.000000	N
+hsa-mir-548x-2	0	0.000000	N
+hsa-mir-548y	0	0.000000	N
+hsa-mir-548z	0	0.000000	N
+hsa-mir-549a	0	0.000000	N
+hsa-mir-550a-1	19	10.137897	N
+hsa-mir-550a-2	17	9.070750	N
+hsa-mir-550a-3	19	10.137897	N
+hsa-mir-550b-1	0	0.000000	N
+hsa-mir-550b-2	0	0.000000	N
+hsa-mir-551a	1	0.533574	N
+hsa-mir-551b	1	0.533574	N
+hsa-mir-552	0	0.000000	N
+hsa-mir-553	0	0.000000	N
+hsa-mir-554	0	0.000000	N
+hsa-mir-555	0	0.000000	N
+hsa-mir-556	1	0.533574	N
+hsa-mir-557	0	0.000000	N
+hsa-mir-5571	0	0.000000	N
+hsa-mir-5572	0	0.000000	N
+hsa-mir-5579	0	0.000000	N
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+hsa-mir-5580	0	0.000000	N
+hsa-mir-5581	1	0.533574	N
+hsa-mir-5582	0	0.000000	N
+hsa-mir-5583-1	0	0.000000	N
+hsa-mir-5583-2	0	0.000000	N
+hsa-mir-5584	0	0.000000	N
+hsa-mir-5585	0	0.000000	N
+hsa-mir-5586	2	1.067147	N
+hsa-mir-5587	0	0.000000	N
+hsa-mir-5588	0	0.000000	N
+hsa-mir-5589	0	0.000000	N
+hsa-mir-559	0	0.000000	N
+hsa-mir-5590	0	0.000000	N
+hsa-mir-5591	0	0.000000	N
+hsa-mir-561	0	0.000000	N
+hsa-mir-562	0	0.000000	N
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+hsa-mir-564	0	0.000000	N
+hsa-mir-566	0	0.000000	N
+hsa-mir-567	0	0.000000	N
+hsa-mir-568	0	0.000000	N
+hsa-mir-5680	0	0.000000	N
+hsa-mir-5681a	0	0.000000	N
+hsa-mir-5681b	0	0.000000	N
+hsa-mir-5682	0	0.000000	N
+hsa-mir-5683	2	1.067147	N
+hsa-mir-5684	0	0.000000	N
+hsa-mir-5685	0	0.000000	N
+hsa-mir-5687	0	0.000000	N
+hsa-mir-5688	0	0.000000	N
+hsa-mir-5689	0	0.000000	N
+hsa-mir-569	0	0.000000	N
+hsa-mir-5690	0	0.000000	N
+hsa-mir-5691	0	0.000000	N
+hsa-mir-5692a-1	0	0.000000	N
+hsa-mir-5692a-2	0	0.000000	N
+hsa-mir-5692b	0	0.000000	N
+hsa-mir-5692c-1	0	0.000000	N
+hsa-mir-5692c-2	0	0.000000	N
+hsa-mir-5693	0	0.000000	N
+hsa-mir-5694	0	0.000000	N
+hsa-mir-5695	0	0.000000	N
+hsa-mir-5696	1	0.533574	N
+hsa-mir-5697	0	0.000000	N
+hsa-mir-5698	1	0.533574	N
+hsa-mir-5699	0	0.000000	N
+hsa-mir-570	0	0.000000	N
+hsa-mir-5700	0	0.000000	N
+hsa-mir-5701-1	0	0.000000	N
+hsa-mir-5701-2	0	0.000000	N
+hsa-mir-5701-3	0	0.000000	N
+hsa-mir-5702	0	0.000000	N
+hsa-mir-5703	0	0.000000	N
+hsa-mir-5704	0	0.000000	N
+hsa-mir-5705	0	0.000000	N
+hsa-mir-5706	2	1.067147	N
+hsa-mir-5707	0	0.000000	N
+hsa-mir-5708	0	0.000000	N
+hsa-mir-571	0	0.000000	N
+hsa-mir-572	0	0.000000	N
+hsa-mir-573	0	0.000000	N
+hsa-mir-5739	0	0.000000	N
+hsa-mir-574	247	131.792658	N
+hsa-mir-575	0	0.000000	N
+hsa-mir-576	38	20.275793	N
+hsa-mir-577	2	1.067147	N
+hsa-mir-578	2	1.067147	N
+hsa-mir-5787	0	0.000000	N
+hsa-mir-579	2	1.067147	N
+hsa-mir-580	0	0.000000	N
+hsa-mir-581	3	1.600721	N
+hsa-mir-582	88	46.954469	N
+hsa-mir-583	0	0.000000	N
+hsa-mir-584	27	14.406485	N
+hsa-mir-585	2	1.067147	N
+hsa-mir-586	0	0.000000	N
+hsa-mir-587	0	0.000000	N
+hsa-mir-588	0	0.000000	N
+hsa-mir-589	235	125.389775	N
+hsa-mir-590	52	27.745823	N
+hsa-mir-591	0	0.000000	N
+hsa-mir-592	3	1.600721	N
+hsa-mir-593	0	0.000000	N
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+hsa-mir-597	1	0.533574	N
+hsa-mir-598	5	2.667868	N
+hsa-mir-599	0	0.000000	N
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+hsa-mir-601	0	0.000000	N
+hsa-mir-602	0	0.000000	N
+hsa-mir-603	0	0.000000	N
+hsa-mir-604	0	0.000000	N
+hsa-mir-605	0	0.000000	N
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+hsa-mir-6071	0	0.000000	N
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+hsa-mir-6075	0	0.000000	N
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+hsa-mir-6077	0	0.000000	N
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+hsa-mir-6079	0	0.000000	N
+hsa-mir-608	0	0.000000	N
+hsa-mir-6080	0	0.000000	N
+hsa-mir-6081	0	0.000000	N
+hsa-mir-6082	0	0.000000	N
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+hsa-mir-6084	0	0.000000	N
+hsa-mir-6085	0	0.000000	N
+hsa-mir-6086	0	0.000000	N
+hsa-mir-6087	0	0.000000	N
+hsa-mir-6088	0	0.000000	N
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+hsa-mir-6134	0	0.000000	N
+hsa-mir-614	0	0.000000	N
+hsa-mir-615	21	11.205044	N
+hsa-mir-616	20	10.671470	N
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+hsa-mir-619	0	0.000000	N
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+hsa-mir-623	0	0.000000	N
+hsa-mir-624	1	0.533574	N
+hsa-mir-625	196	104.580408	N
+hsa-mir-626	0	0.000000	N
+hsa-mir-627	7	3.735015	N
+hsa-mir-628	212	113.117585	N
+hsa-mir-629	241	128.591217	N
+hsa-mir-630	0	0.000000	N
+hsa-mir-631	0	0.000000	N
+hsa-mir-632	0	0.000000	N
+hsa-mir-633	0	0.000000	N
+hsa-mir-634	0	0.000000	N
+hsa-mir-635	0	0.000000	N
+hsa-mir-636	4	2.134294	N
+hsa-mir-637	0	0.000000	N
+hsa-mir-638	0	0.000000	N
+hsa-mir-639	0	0.000000	N
+hsa-mir-640	0	0.000000	N
+hsa-mir-641	1	0.533574	N
+hsa-mir-642a	30	16.007205	N
+hsa-mir-642b	0	0.000000	N
+hsa-mir-643	2	1.067147	N
+hsa-mir-644a	0	0.000000	N
+hsa-mir-645	0	0.000000	N
+hsa-mir-646	0	0.000000	N
+hsa-mir-647	0	0.000000	N
+hsa-mir-648	0	0.000000	N
+hsa-mir-649	0	0.000000	N
+hsa-mir-6499	0	0.000000	N
+hsa-mir-650	0	0.000000	N
+hsa-mir-6500	0	0.000000	N
+hsa-mir-6501	0	0.000000	N
+hsa-mir-6502	0	0.000000	N
+hsa-mir-6503	1	0.533574	N
+hsa-mir-6504	0	0.000000	N
+hsa-mir-6505	0	0.000000	N
+hsa-mir-6506	0	0.000000	N
+hsa-mir-6507	0	0.000000	N
+hsa-mir-6508	1	0.533574	N
+hsa-mir-6509	1	0.533574	N
+hsa-mir-651	2	1.067147	N
+hsa-mir-6510	4	2.134294	N
+hsa-mir-6511a-1	0	0.000000	N
+hsa-mir-6511a-2	0	0.000000	N
+hsa-mir-6511a-3	0	0.000000	N
+hsa-mir-6511a-4	0	0.000000	N
+hsa-mir-6511b-1	6	3.201441	N
+hsa-mir-6511b-2	6	3.201441	N
+hsa-mir-6512	0	0.000000	N
+hsa-mir-6513	0	0.000000	N
+hsa-mir-6514	2	1.067147	N
+hsa-mir-6515	1	0.533574	N
+hsa-mir-6516	3	1.600721	N
+hsa-mir-652	147	78.435306	N
+hsa-mir-653	9	4.802162	N
+hsa-mir-654	55	29.346543	N
+hsa-mir-655	2	1.067147	N
+hsa-mir-656	0	0.000000	N
+hsa-mir-657	0	0.000000	N
+hsa-mir-658	0	0.000000	N
+hsa-mir-659	8	4.268588	N
+hsa-mir-660	46	24.544382	N
+hsa-mir-661	0	0.000000	N
+hsa-mir-662	2	1.067147	N
+hsa-mir-663a	0	0.000000	N
+hsa-mir-663b	0	0.000000	N
+hsa-mir-664a	416	221.966581	N
+hsa-mir-664b	19	10.137897	N
+hsa-mir-665	0	0.000000	N
+hsa-mir-668	0	0.000000	N
+hsa-mir-670	0	0.000000	N
+hsa-mir-671	14	7.470029	N
+hsa-mir-6715a	0	0.000000	N
+hsa-mir-6715b	0	0.000000	N
+hsa-mir-6716	1	0.533574	N
+hsa-mir-6717	0	0.000000	N
+hsa-mir-6718	0	0.000000	N
+hsa-mir-6719	0	0.000000	N
+hsa-mir-6720	1	0.533574	N
+hsa-mir-6721	0	0.000000	N
+hsa-mir-6722	0	0.000000	N
+hsa-mir-6723	0	0.000000	N
+hsa-mir-6724-1	0	0.000000	N
+hsa-mir-6724-2	0	0.000000	N
+hsa-mir-6724-3	0	0.000000	N
+hsa-mir-6724-4	0	0.000000	N
+hsa-mir-6726	1	0.533574	N
+hsa-mir-6727	0	0.000000	N
+hsa-mir-6728	0	0.000000	N
+hsa-mir-6729	0	0.000000	N
+hsa-mir-6730	1	0.533574	N
+hsa-mir-6731	1	0.533574	N
+hsa-mir-6732	0	0.000000	N
+hsa-mir-6733	1	0.533574	N
+hsa-mir-6734	0	0.000000	N
+hsa-mir-6735	0	0.000000	N
+hsa-mir-6736	0	0.000000	N
+hsa-mir-6737	8	4.268588	N
+hsa-mir-6738	0	0.000000	N
+hsa-mir-6739	3	1.600721	N
+hsa-mir-6740	1	0.533574	N
+hsa-mir-6741	1	0.533574	N
+hsa-mir-6742	0	0.000000	N
+hsa-mir-6743	1	0.533574	N
+hsa-mir-6744	0	0.000000	N
+hsa-mir-6745	0	0.000000	N
+hsa-mir-6746	0	0.000000	N
+hsa-mir-6747	1	0.533574	N
+hsa-mir-6748	0	0.000000	N
+hsa-mir-6749	0	0.000000	N
+hsa-mir-675	110	58.693086	N
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data/gdc_data_organized/81e32f39-3aa0-468b-87ed-dd2eb6165ddf/f77c8703-fae0-40e5-99b6-771f66ac6c33.methylation_array.sesame.level3betas.txt

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