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LICENSES/CC-BY-4.0.txt

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+Attribution 4.0 International
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LICENSES/CC0-1.0.txt

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+Creative Commons Legal Code
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README.md

@@ -1,6 +1,32 @@
----
-license: other
-license_name: mixed
-pretty_name: WSI test data
-tags: [whole-slide-image, pathology, digital-pathology, test-data]
----
+---
+license: other
+license_name: mixed
+pretty_name: WSI test data
+tags:
+  - whole-slide-image
+  - pathology
+  - digital-pathology
+  - test-data
+---
+
+# WSI test data
+
+WSI test slides for the [opentile](https://github.com/imi-bigpicture/opentile) test suite, mirrored here for fast, reliable CI downloads. Each slide folder holds a self-contained `metadata.json`; the root `index.json` is the aggregate. Each slide's original source, license, credit and attribution are in its `metadata.json`.
+
+| File | Source | License | Credit |
+|---|---|---|---|
+| `svs/CMU-1/CMU-1.svs` | [source](https://openslide.cs.cmu.edu/download/openslide-testdata/Aperio/CMU-1.svs) | CC0-1.0 | - |
+| `ndpi/CMU-1/CMU-1.ndpi` | [source](https://openslide.cs.cmu.edu/download/openslide-testdata/Hamamatsu/CMU-1.ndpi) | CC0-1.0 | - |
+| `huron/Huron-1/Huron-1.tif` | [source](https://openslide.cs.cmu.edu/download/openslide-testdata/Huron/Huron-1.tif) | CC0-1.0 | Huron Digital Pathology |
+| `scn/scn1/Leica-1.scn` | [source](https://openslide.cs.cmu.edu/download/openslide-testdata/Leica/Leica-1.scn) | distributable | Yves Sucaet |
+| `scn/scn2/Leica-2.scn` | [source](https://openslide.cs.cmu.edu/download/openslide-testdata/Leica/Leica-2.scn) | distributable | Ira Hensen, CECAD Imaging Facility, Cologne |
+| `scn/scn3/Leica-3.scn` | [source](https://openslide.cs.cmu.edu/download/openslide-testdata/Leica/Leica-3.scn) | distributable | Ira Hensen, CECAD Imaging Facility, Cologne |
+| `argos/Argos-1/Argos-1.avs` | [source](https://openslide.cs.cmu.edu/download/openslide-testdata/Argos/Argos-1.avs) | CC0-1.0 | - |
+| `argos/Argos-1-Stacked/Argos-1-Stacked.avs` | [source](https://openslide.cs.cmu.edu/download/openslide-testdata/Argos/Argos-1-Stacked.avs) | CC0-1.0 | - |
+| `qptiff/HandEcompressed/HandEcompressed_Scan1.qptiff` | [source](https://downloads.openmicroscopy.org/images/Vectra-QPTIFF/perkinelmer/PKI_scans/HandEcompressed_Scan1.qptiff) | CC-BY-4.0 | PerkinElmer |
+| `qptiff/LuCa-7color/LuCa-7color_Scan1.qptiff` | [source](https://downloads.openmicroscopy.org/images/Vectra-QPTIFF/perkinelmer/PKI_scans/LuCa-7color_Scan1.qptiff) | CC-BY-4.0 | PerkinElmer |
+
+## Licenses
+
+- **CC0-1.0** - public-domain dedication (`LICENSES/CC0-1.0.txt`); no conditions.
+- **CC-BY-4.0** - `LICENSES/CC-BY-4.0.txt`; requires attribution, carried in each qptiff slide's `metadata.json` `attribution` field (creator + license link).

argos/Argos-1-Stacked/metadata.json

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+{
+  "Argos-1-Stacked.avs": {
+    "description": "Brightfield, Z-stack",
+    "format": "ARGOS AVS",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Argos/Argos-1-Stacked.avs",
+    "license": "CC0-1.0",
+    "sha256": "1b88645342040b62bb3c3feaa1db76f9419cd7749327690b1221475a4d04c34a",
+    "size": 460096120
+  }
+}

argos/Argos-1/metadata.json

@@ -0,0 +1,10 @@
+{
+  "Argos-1.avs": {
+    "description": "Brightfield",
+    "format": "ARGOS AVS",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Argos/Argos-1.avs",
+    "license": "CC0-1.0",
+    "sha256": "3b68b5be6270344ad1823bb6c74c242d60493be90926002f6cdf6e96ca8ff28d",
+    "size": 93458691
+  }
+}

huron/Huron-1/metadata.json

@@ -0,0 +1,11 @@
+{
+  "Huron-1.tif": {
+    "description": "H&E stain, brightfield, 20x objective, JPEG, scanned on Huron LE176",
+    "format": "Huron TIFF",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Huron/Huron-1.tif",
+    "license": "CC0-1.0",
+    "credit": "Huron Digital Pathology",
+    "sha256": "295506f9872becce44033baa830dfd7a7644d104a832e6a7f73565be990c465d",
+    "size": 35568452
+  }
+}

index.json

@@ -0,0 +1,90 @@
+{
+  "svs/CMU-1/CMU-1.svs": {
+    "description": "Brightfield, JPEG",
+    "format": "Aperio SVS",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Aperio/CMU-1.svs",
+    "license": "CC0-1.0",
+    "sha256": "00a3d54482cd707abf254fe69dccc8d06b8ff757a1663f1290c23418c480eb30",
+    "size": 177552579
+  },
+  "ndpi/CMU-1/CMU-1.ndpi": {
+    "description": "Small scan with valid JPEG headers, brightfield, circa 2009",
+    "format": "Hamamatsu NDPI",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Hamamatsu/CMU-1.ndpi",
+    "license": "CC0-1.0",
+    "sha256": "edf4a1ccf395c7000ae93ad3b44c07d97043810e00be0c1d167dd09bbe436e46",
+    "size": 198030965
+  },
+  "huron/Huron-1/Huron-1.tif": {
+    "description": "H&E stain, brightfield, 20x objective, JPEG, scanned on Huron LE176",
+    "format": "Huron TIFF",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Huron/Huron-1.tif",
+    "license": "CC0-1.0",
+    "credit": "Huron Digital Pathology",
+    "sha256": "295506f9872becce44033baa830dfd7a7644d104a832e6a7f73565be990c465d",
+    "size": 35568452
+  },
+  "scn/scn1/Leica-1.scn": {
+    "description": "Brightfield, single ROI, 2010/10/01 schema",
+    "format": "Leica SCN",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Leica/Leica-1.scn",
+    "license": "distributable",
+    "credit": "Yves Sucaet",
+    "sha256": "63a3c00fef5215497a9725cf19092a93f7f5ff855ce8561af74b087631831a97",
+    "size": 291812870
+  },
+  "scn/scn2/Leica-2.scn": {
+    "description": "Mouse kidney, H&E stain, brightfield, multiple ROIs with identical resolutions, 2010/10/01 schema",
+    "format": "Leica SCN",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Leica/Leica-2.scn",
+    "license": "distributable",
+    "credit": "Ira Hensen, CECAD Imaging Facility, Cologne",
+    "sha256": "f10523f88afac728f6d7d18ba39926be56766b739e68f00cace6ceea5c6c2cea",
+    "size": 2252519322
+  },
+  "scn/scn3/Leica-3.scn": {
+    "description": "Mouse kidney, H&E stain, brightfield, multiple ROIs with different resolutions, 2010/10/01 schema",
+    "format": "Leica SCN",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Leica/Leica-3.scn",
+    "license": "distributable",
+    "credit": "Ira Hensen, CECAD Imaging Facility, Cologne",
+    "sha256": "5ec8867f3edf90e685b8436e515bc24dbbefae545fb556dab568d7691592849b",
+    "size": 2993595082
+  },
+  "argos/Argos-1/Argos-1.avs": {
+    "description": "Brightfield",
+    "format": "ARGOS AVS",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Argos/Argos-1.avs",
+    "license": "CC0-1.0",
+    "sha256": "3b68b5be6270344ad1823bb6c74c242d60493be90926002f6cdf6e96ca8ff28d",
+    "size": 93458691
+  },
+  "argos/Argos-1-Stacked/Argos-1-Stacked.avs": {
+    "description": "Brightfield, Z-stack",
+    "format": "ARGOS AVS",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Argos/Argos-1-Stacked.avs",
+    "license": "CC0-1.0",
+    "sha256": "1b88645342040b62bb3c3feaa1db76f9419cd7749327690b1221475a4d04c34a",
+    "size": 460096120
+  },
+  "qptiff/HandEcompressed/HandEcompressed_Scan1.qptiff": {
+    "description": "Brightfield, RGB, JPEG compression",
+    "format": "PerkinElmer Vectra QPTIFF",
+    "source": "https://downloads.openmicroscopy.org/images/Vectra-QPTIFF/perkinelmer/PKI_scans/HandEcompressed_Scan1.qptiff",
+    "license": "CC-BY-4.0",
+    "credit": "PerkinElmer",
+    "attribution": "(c) PerkinElmer (http://www.perkinelmer.com). Licensed under the Creative Commons Attribution 4.0 International License (CC BY 4.0), https://creativecommons.org/licenses/by/4.0/. The image content is unchanged.",
+    "sha256": "e2f5fae28409da7ca208ac0d53af988696313df67c3b0b6d6e0ac3ce7dfbe0d9",
+    "size": 421825729
+  },
+  "qptiff/LuCa-7color/LuCa-7color_Scan1.qptiff": {
+    "description": "Fluorescence, 5 layers",
+    "format": "PerkinElmer Vectra QPTIFF",
+    "source": "https://downloads.openmicroscopy.org/images/Vectra-QPTIFF/perkinelmer/PKI_scans/LuCa-7color_Scan1.qptiff",
+    "license": "CC-BY-4.0",
+    "credit": "PerkinElmer",
+    "attribution": "(c) PerkinElmer (http://www.perkinelmer.com). Licensed under the Creative Commons Attribution 4.0 International License (CC BY 4.0), https://creativecommons.org/licenses/by/4.0/. The image content is unchanged.",
+    "sha256": "0a0558670a479d826f13e467fd7e50cb6d691c9b4009d86bf579d1a0f3c526dc",
+    "size": 2090277544
+  }
+}

ndpi/CMU-1/metadata.json

@@ -0,0 +1,10 @@
+{
+  "CMU-1.ndpi": {
+    "description": "Small scan with valid JPEG headers, brightfield, circa 2009",
+    "format": "Hamamatsu NDPI",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Hamamatsu/CMU-1.ndpi",
+    "license": "CC0-1.0",
+    "sha256": "edf4a1ccf395c7000ae93ad3b44c07d97043810e00be0c1d167dd09bbe436e46",
+    "size": 198030965
+  }
+}

qptiff/HandEcompressed/metadata.json

@@ -0,0 +1,12 @@
+{
+  "HandEcompressed_Scan1.qptiff": {
+    "description": "Brightfield, RGB, JPEG compression",
+    "format": "PerkinElmer Vectra QPTIFF",
+    "source": "https://downloads.openmicroscopy.org/images/Vectra-QPTIFF/perkinelmer/PKI_scans/HandEcompressed_Scan1.qptiff",
+    "license": "CC-BY-4.0",
+    "credit": "PerkinElmer",
+    "attribution": "(c) PerkinElmer (http://www.perkinelmer.com). Licensed under the Creative Commons Attribution 4.0 International License (CC BY 4.0), https://creativecommons.org/licenses/by/4.0/. The image content is unchanged.",
+    "sha256": "e2f5fae28409da7ca208ac0d53af988696313df67c3b0b6d6e0ac3ce7dfbe0d9",
+    "size": 421825729
+  }
+}

qptiff/LuCa-7color/metadata.json

@@ -0,0 +1,12 @@
+{
+  "LuCa-7color_Scan1.qptiff": {
+    "description": "Fluorescence, 5 layers",
+    "format": "PerkinElmer Vectra QPTIFF",
+    "source": "https://downloads.openmicroscopy.org/images/Vectra-QPTIFF/perkinelmer/PKI_scans/LuCa-7color_Scan1.qptiff",
+    "license": "CC-BY-4.0",
+    "credit": "PerkinElmer",
+    "attribution": "(c) PerkinElmer (http://www.perkinelmer.com). Licensed under the Creative Commons Attribution 4.0 International License (CC BY 4.0), https://creativecommons.org/licenses/by/4.0/. The image content is unchanged.",
+    "sha256": "0a0558670a479d826f13e467fd7e50cb6d691c9b4009d86bf579d1a0f3c526dc",
+    "size": 2090277544
+  }
+}

scn/scn1/metadata.json

@@ -0,0 +1,11 @@
+{
+  "Leica-1.scn": {
+    "description": "Brightfield, single ROI, 2010/10/01 schema",
+    "format": "Leica SCN",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Leica/Leica-1.scn",
+    "license": "distributable",
+    "credit": "Yves Sucaet",
+    "sha256": "63a3c00fef5215497a9725cf19092a93f7f5ff855ce8561af74b087631831a97",
+    "size": 291812870
+  }
+}

scn/scn2/metadata.json

@@ -0,0 +1,11 @@
+{
+  "Leica-2.scn": {
+    "description": "Mouse kidney, H&E stain, brightfield, multiple ROIs with identical resolutions, 2010/10/01 schema",
+    "format": "Leica SCN",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Leica/Leica-2.scn",
+    "license": "distributable",
+    "credit": "Ira Hensen, CECAD Imaging Facility, Cologne",
+    "sha256": "f10523f88afac728f6d7d18ba39926be56766b739e68f00cace6ceea5c6c2cea",
+    "size": 2252519322
+  }
+}

scn/scn3/metadata.json

@@ -0,0 +1,11 @@
+{
+  "Leica-3.scn": {
+    "description": "Mouse kidney, H&E stain, brightfield, multiple ROIs with different resolutions, 2010/10/01 schema",
+    "format": "Leica SCN",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Leica/Leica-3.scn",
+    "license": "distributable",
+    "credit": "Ira Hensen, CECAD Imaging Facility, Cologne",
+    "sha256": "5ec8867f3edf90e685b8436e515bc24dbbefae545fb556dab568d7691592849b",
+    "size": 2993595082
+  }
+}

svs/CMU-1/metadata.json

@@ -0,0 +1,10 @@
+{
+  "CMU-1.svs": {
+    "description": "Brightfield, JPEG",
+    "format": "Aperio SVS",
+    "source": "https://openslide.cs.cmu.edu/download/openslide-testdata/Aperio/CMU-1.svs",
+    "license": "CC0-1.0",
+    "sha256": "00a3d54482cd707abf254fe69dccc8d06b8ff757a1663f1290c23418c480eb30",
+    "size": 177552579
+  }
+}