#!/bin/sh #PJM -L rscgrp=b-batch #PJM -L gpu=1 #PJM -L elapse=48:00:00 #PJM -N baseline_scdfm #PJM -j #PJM -o /home/hp250092/ku50001222/qian/aivc/lfj/GRN/baseline/baseline_%j.out module load cuda/12.2.2 module load cudnn/8.9.7 module load gcc-toolset/12 source /home/hp250092/ku50001222/qian/aivc/lfj/ori_scDFM_env/bin/activate cd /home/hp250092/ku50001222/qian/aivc/lfj/transfer/code/ori_scDFM export PYTHONPATH=./ export PYTORCH_CUDA_ALLOC_CONF=max_split_size_mb:256 RESULT_PATH=/home/hp250092/ku50001222/qian/aivc/lfj/GRN/baseline COMMON_ARGS="\ --batch_size=48 \ --devices='0' \ --model_type=origin \ --lr=5e-5 \ --steps=200000 \ --data_name=norman \ --d_model=128 \ --eta_min=1e-6 \ --fusion_method=differential_perceiver \ --infer_top_gene=1000 \ --n_top_genes=5000 \ --perturbation_function=crisper \ --noise_type=Gaussian \ --mode=predict_y \ --gamma=0.5 \ --split_method=additive \ --use_mmd_loss \ --fold=1 \ --topk=30 \ --use_negative_edge \ --result_path=${RESULT_PATH}" echo "==========================================" echo "Job ID: $PJM_JOBID" echo "Job Name: $PJM_JOBNAME" echo "Start: $(date)" echo "Node: $(hostname)" echo "GPU: $(nvidia-smi --query-gpu=name,memory.total --format=csv,noheader 2>/dev/null || echo 'N/A')" echo "Run: scDFM baseline (norman, original paper config)" echo "==========================================" # Step 1: Eval with random init (iteration 0) echo "[Step 1] Evaluating random-init model..." python src/script/run.py ${COMMON_ARGS} \ --test_only \ --print_every=50000 # Step 2: Train 200k steps, checkpoint every 50k, eval only at end echo "[Step 2] Training 200k steps..." python src/script/run.py ${COMMON_ARGS} \ --print_every=50000 echo "==========================================" echo "Finished: $(date)" echo "=========================================="