#!/bin/bash #SBATCH --time=8:00:00 #SBATCH --cpus-per-task=4 #SBATCH --array=1-9 #SBATCH --mem=48G #SBATCH --qos=nopreemption #SBATCH -p cpu INDEX_PATH="path/to/index" QUERY_PATH="path/to/query" DATA_PATH="path/to/data" cd $DATA_PATH query_name=$(sed -n "${SLURM_ARRAY_TASK_ID}p" $QUERY_PATH) echo "downloading ${query_name}" ./download_partition.sh ${query_name} ${INDEX_PATH} ${DATA_PATH}