explcre's picture
Upload runs/ccc_lambda/lam0.25_seed0/summary.json with huggingface_hub
780f292 verified
Raw
History Blame Contribute Delete
17 kB
{
"line": "C32",
"truth": "/mnt/ssd/scdistill_data/arc_data/tahoe_holdout_h5ad/c26.h5ad",
"plate_filter": "plate10",
"train_plates": "all",
"split_toml": "/mnt/ssd/scdistill_data/arc_state_se/st_hvg_tahoe/fewshot/generalization.toml",
"teacher_sim": "/mnt/ssd/scdistill_data/scdistill_fewshot/C32_simulated_fewshot.h5ad",
"fewshot_test_only": true,
"inductive": false,
"kd_space": "raw",
"null_teacher": "none",
"student_arch": "state_xs",
"steps": 800000,
"bs": 256,
"dim": 2000,
"seed": 0,
"n_drugs": 417,
"distill_mode": "energy",
"param_total_m": 3.211472,
"param_active_m": 3.211472,
"flow_pairing": "ot",
"flow_rollout": "onpolicy",
"flow_roll_steps": 4,
"flow_lambda": 0.1,
"flow_end_steps": 4,
"ode_steps": 10,
"ode_method": "euler",
"val_frac": 0.15,
"eval_every": 1000,
"val_policy": "strict",
"val_target": "own",
"val_metric": "pearson_delta",
"val_inductive_frac": 0.0,
"log_test_trace": false,
"n_inductive_val_perts": 0,
"val_on_state_val": false,
"val_mode": "transductive",
"n_state_val_perts": 0,
"early_stop_patience": 200,
"early_stop_min_delta": 0.0001,
"early_stop_ema": 0.3,
"early_stop_min_steps": 120000,
"distill_residual": false,
"shape_gamma": 0.0,
"shape_n_proj": 50,
"shape_var_gamma": 0.0,
"shape_in_whitened": false,
"shape_whiten_rank": 0,
"wkdf_gamma": 1.0,
"wkdf_ratio": 2.0,
"wkdf_eps": 1e-05,
"wkdf_shape_gamma": 0.0,
"wkdf_shape_mode": "centred",
"reward_gamma": 0.0,
"reward_scramble": false,
"feat_gamma": 0.0,
"featalign_scramble": false,
"huber_gamma": 0.0,
"huber_delta": 0.9,
"teacher_denoise_rank": 0,
"teacher_denoise_mode": "truncate",
"fusion_mode": "off",
"fusion_scramble": false,
"laplacian_gamma": 0.0,
"laplacian_k": 15,
"laplacian_normalized": 1,
"laplacian_scramble": false,
"whiten_rank": 0,
"whiten_alpha": 1.0,
"whiten_shrink": 0.05,
"whiten_gmin": 0.2,
"whiten_gmax": 3.0,
"whiten_source": "delta",
"mbar_l2_norm": null,
"convergence": {
"distilled_plus_wkdf_ccc": {
"best_step": 261000,
"best_val": 0.6860592834730338,
"final_val": 0.6762816764891277,
"n_evals": 463,
"validated": true,
"val_trace": [
0.14899125238189456,
0.4230388411319378,
0.4097645461995295,
0.4920016956475046,
0.502944268530206,
0.4654507363818355,
0.556866633907958,
0.5347093676470456,
0.5512998335989777,
0.5292049498805034,
0.5745152004921796,
0.5762720242134217,
0.5678207171837899,
0.5859076536515856,
0.5848183798339798,
0.5814624696192182,
0.5885594450549124,
0.5917392225411167,
0.6128005679957419,
0.5908171473899729,
0.5974815304635053,
0.6074882816173107,
0.613048454343638,
0.61431284274696,
0.6320826946911413,
0.6249730990140151,
0.6314355054203281,
0.6206834452941576,
0.6229818558940369,
0.5988961281675144,
0.6324008703350359,
0.6250693481332189,
0.6278991294989417,
0.6291387983192804,
0.634497351763853,
0.6268493060963409,
0.6440843833609857,
0.6428000883663199,
0.6460117497906426,
0.6527933080171356,
0.6537202568375562,
0.6357155371373446,
0.6516987272980189,
0.6523459162502452,
0.6385409413550571,
0.6589873665577909,
0.6572760985342252,
0.6353228452124184,
0.6546326937990259,
0.6538831914782636,
0.6608287204568433,
0.6419756732107837,
0.6611074115727245,
0.6620144913920062,
0.6528233330016223,
0.6686903299100843,
0.6567305652232036,
0.6516037280355842,
0.6571983174402006,
0.6385738896879842,
0.6663617315054287,
0.6605364063172298,
0.6750885098129551,
0.6712932171331104,
0.6668749251363668,
0.6525515219805825,
0.6543524551117474,
0.6581079437857759,
0.6635833191572643,
0.6677671762680926,
0.6665501536635795,
0.664528683354003,
0.671438004802885,
0.6623860674936352,
0.674565668849728,
0.6702304112296132,
0.6714069067706698,
0.6748808342724633,
0.6715439801316891,
0.6546712998807783,
0.6622270028583871,
0.6686852573611323,
0.6730902190287413,
0.6648406861862232,
0.6741076906133087,
0.6632885737680038,
0.6614728888171365,
0.6763224254550261,
0.6651553120453383,
0.6658458559584399,
0.6685489525792914,
0.6652765388351639,
0.6733572425600187,
0.6685049867410738,
0.6620610225951871,
0.6714630919631649,
0.6718832873348362,
0.6718860297533625,
0.6737826698878256,
0.6727526675247801,
0.6769928321397346,
0.6620221538823297,
0.6776382371014843,
0.6732660277624222,
0.6745472708123681,
0.6727025849597813,
0.6748515805305206,
0.6707365290931498,
0.6779360699720249,
0.6771185921443762,
0.6741536462351613,
0.6689585546542595,
0.6790942205457031,
0.6740398352487841,
0.6698784437112651,
0.6751119897050224,
0.677218439977563,
0.6778191839942327,
0.672374672434873,
0.6717300394778177,
0.6800247565837143,
0.6771993422557635,
0.6749805312461666,
0.6709170271350454,
0.6814742031442372,
0.6724888679478563,
0.6772941469399144,
0.6721943872344688,
0.6727701665862188,
0.6804628460888208,
0.6846019114339967,
0.6728606262368033,
0.6806848886908842,
0.6687132875601421,
0.6669477379669384,
0.6787651921244311,
0.6796446653130737,
0.6774055482975438,
0.6785534271018715,
0.672401576430132,
0.6715359917335063,
0.6778473157067132,
0.6818497743454845,
0.6766213784482247,
0.6776551260826523,
0.6666380517830053,
0.6796389743362301,
0.6768562334976971,
0.6764134267025385,
0.6788706919556242,
0.6722860265148026,
0.6778132330313089,
0.6813201535450268,
0.67801214587864,
0.6799627333969006,
0.6757876532756355,
0.6760291002906772,
0.6795074030564834,
0.6810378835766076,
0.6701057438758242,
0.6808775914372763,
0.6809878450984073,
0.6795772177569753,
0.6797629363872364,
0.6757581553425241,
0.6803281041190878,
0.6789507651354688,
0.6778684481019946,
0.6784076516507773,
0.6785026144978034,
0.6815929448191044,
0.6724458871674001,
0.6789845126562629,
0.673886001594579,
0.6823887235458488,
0.6794529505495086,
0.6776760381389684,
0.6789633093577002,
0.680943563842077,
0.6751522636921686,
0.6786686297704378,
0.675057496011475,
0.6573458102652239,
0.6784108683209757,
0.6794562011777358,
0.6796325104395453,
0.6760046794628763,
0.6777602960646035,
0.6781416831902685,
0.6750311121132054,
0.6839463902412981,
0.6778852480907334,
0.6724240339133055,
0.6762142256476512,
0.6801456810870993,
0.6713750827586201,
0.6770221604326863,
0.6812044521914873,
0.6742440626578098,
0.6749354459964979,
0.6788626491544943,
0.6778042083446649,
0.6797842814231526,
0.672688082343392,
0.6757020969700703,
0.681117619679317,
0.6823252309201139,
0.6759691266255204,
0.6806557332775263,
0.6751071727008865,
0.6800487944284521,
0.6841691485772482,
0.67589713349814,
0.675160921830252,
0.6841608887200795,
0.6825550672213943,
0.6820233954759876,
0.6827005268866211,
0.6828814324162312,
0.6406855313285867,
0.6826278756283386,
0.684990337521283,
0.6826216807159969,
0.6824190991574444,
0.6819686377119673,
0.6804362387693906,
0.6776358255701191,
0.6804553815160023,
0.6828270509837024,
0.6812169846255085,
0.6774132087870971,
0.6841740959338337,
0.6838717962086612,
0.6824142054676902,
0.6830609159081061,
0.6767153183907153,
0.6766345462238736,
0.677259949021188,
0.6826631823020599,
0.6821008655892216,
0.6804063283863614,
0.6821870184397351,
0.6835117382743696,
0.6826217791249195,
0.6812809510549735,
0.6779539901828694,
0.6781599315919528,
0.6812622134030499,
0.6788105172377731,
0.6780621211490264,
0.6815905869269065,
0.6799313000532761,
0.6827881115438102,
0.683476225530054,
0.6832034789639688,
0.6836290191239335,
0.6834859929183132,
0.6826636025737877,
0.6773337304218336,
0.6798990381021974,
0.6799591245330406,
0.6860592834730338,
0.6857270210319175,
0.6809865929409433,
0.6848086865804802,
0.6745116495142374,
0.68129764415133,
0.6824181314061243,
0.6849731680062273,
0.68263158234865,
0.6798988305626628,
0.6777323847142439,
0.6746807698239051,
0.6815650179329621,
0.6788921654076779,
0.6811211656720605,
0.6826562381582658,
0.6790241608186748,
0.6851895869561111,
0.6811434426024118,
0.6799420754635951,
0.6633233577750575,
0.6767737584673491,
0.6807087167809434,
0.6815761889812368,
0.6753306526438608,
0.6798440904035791,
0.678654713703971,
0.6794699282653089,
0.6833132725184566,
0.6773064446529792,
0.6791393945466211,
0.6756198661928484,
0.6815194507764453,
0.6791248000542323,
0.6796760796231376,
0.682133253540933,
0.6815234832366702,
0.6849064149437952,
0.6805153639083918,
0.6822868744712551,
0.6799288432924653,
0.6766894611516239,
0.6810752508680772,
0.6771278033701097,
0.6800104320933984,
0.6794051728577205,
0.6804387285847194,
0.6844375706721777,
0.6786833930887642,
0.6806973421349415,
0.6805810018168511,
0.679433697475523,
0.6755272363877715,
0.6838278206665162,
0.6827614757907258,
0.6800160197534741,
0.6763663176402618,
0.677489186897654,
0.6799721920378897,
0.6756697626820981,
0.6805353662245708,
0.6816304578762432,
0.6774055161489932,
0.6822190020702026,
0.6805765330403272,
0.6779249072642863,
0.6814470499310673,
0.6814005992914073,
0.6808095033028284,
0.6810436332894871,
0.6804748746998998,
0.6792833590228886,
0.6791640155923093,
0.6801971876249556,
0.68028943613252,
0.6824120553510492,
0.6799920892801516,
0.6789893998981914,
0.6795530174329264,
0.6771785974093403,
0.681531982422209,
0.6803449998044397,
0.675955496521985,
0.6788847009793486,
0.6801297450566159,
0.682592845725222,
0.6741485502905904,
0.6793104590162802,
0.6750086897967269,
0.6730342158889941,
0.6756481175817285,
0.677330226869214,
0.675473671561719,
0.6797231581493576,
0.6704741291216086,
0.6814120492825402,
0.6818134227866675,
0.6793230096649203,
0.6767062254252924,
0.6804574624600103,
0.6802128669481382,
0.6770124299634952,
0.6784276617490668,
0.6712505259822011,
0.6798680926718986,
0.6790581462015124,
0.6803599210225343,
0.6758996387391012,
0.6770329007469141,
0.6735202226603727,
0.6792608385755687,
0.6775981203302318,
0.6805247898509655,
0.6749428986395637,
0.6778536210323739,
0.6735382220500454,
0.6812906614559113,
0.6801416383148366,
0.6755587508844159,
0.6757284057823836,
0.6790384740848405,
0.6733999467509479,
0.6783330099607291,
0.6768207748139704,
0.6708830319494922,
0.6829819585402385,
0.6809478871562373,
0.6762251988548829,
0.6748955023372339,
0.6816946700203923,
0.6794942119621914,
0.6793973679083694,
0.6745785793632784,
0.6777390457474776,
0.6739413952458384,
0.6736987779104422,
0.6806536023463432,
0.680325358231983,
0.6797806872835435,
0.6813542300421314,
0.674419175937472,
0.6743567425105583,
0.6777105689671106,
0.681928681556311,
0.6798366275692272,
0.6751407056663914,
0.6739394338343216,
0.6743665900645455,
0.6796699135444694,
0.680187226423388,
0.6794921288947404,
0.680427239444451,
0.678291171287426,
0.6784446685320963,
0.6761097457509024,
0.676944992887401,
0.6782084660932924,
0.6774724478808946,
0.6782161926613046,
0.6771075762714345,
0.6779863006926717,
0.6435675777167588,
0.6735858291117729,
0.6757518186687768,
0.6804543420588375,
0.6767608804205909,
0.6693127071110252,
0.6792193282004801,
0.6753881231518184,
0.6780383701208514,
0.6777011240376511,
0.6782774880869623,
0.6753129707298574,
0.6792573111372675,
0.6757537035271425,
0.6771594629930465,
0.678023785328487,
0.681905795221908,
0.68004743446488,
0.6747606975793016,
0.6765123961935762,
0.6771420661736284,
0.675650803312095,
0.6760206565898078,
0.675992113409754,
0.677650054572823,
0.6773627887976061,
0.6754557333440857,
0.677668949743076,
0.6772680939974486,
0.6750055934622705,
0.6756335549103306,
0.6794662707206344,
0.6715764738793097,
0.673334127959059,
0.6747662172852553,
0.6778008084820631,
0.679147959992096,
0.6772580145212428,
0.6768433147444625,
0.6745679345402288,
0.6762816764891277
],
"val_metric": "pearson_delta",
"test_trace": null,
"val_alt_trace": null,
"val_alt_metric": "energy",
"early_stopped": true,
"stop_step": 462000,
"ceiling": 800000,
"undertrained": false,
"ema_decay": null,
"ema_val_trace": null,
"ema_test_trace": null,
"ema_final_test": null,
"ema_best_step": null,
"genfrontier_selected": "best_val",
"genfrontier_val": 0.6860592834730338,
"swa_frac": null,
"swa_tail_n": 0
}
},
"protocol": {
"mode": "production",
"family": "cell",
"select_metric": "pearson_delta",
"val_metric": "pearson_delta",
"ceiling": 800000,
"eval_every": 1000,
"val_frac": 0.15,
"val_mode": "transductive",
"early_stop_patience": 200,
"early_stop_min_steps": 120000,
"arms": {
"distilled_plus_wkdf_ccc": {
"best_step": 261000,
"early_stopped": true,
"stop_step": 462000,
"ceiling": 800000,
"undertrained": false
}
},
"undertrained": false,
"trained_to_full": true,
"canonical": "select_metric=pearson_delta val_frac=0.15 eval_every=1000 early_stop_patience=200 early_stop_min_delta=0.0001 early_stop_ema=0.3 early_stop_min_steps=120000 ceiling=800000 (backstop; early-stop fires first, but never before min_steps)"
},
"n_toml_test": 735,
"n_split_test": 735,
"n_split_train": 348,
"n_eval_perts": 70,
"n_real_train_perts": 347,
"energy": {
"distilled_plus_wkdf_ccc": {
"n_perts": 70,
"median_energy_to_truth": 1.862959861755371
},
"teacher": {
"n_perts": 70,
"median_energy_to_truth": 0.13015079498291016
},
"mean": {
"n_perts": 70,
"median_energy_to_truth": 0.2804889678955078
}
}
}