explcre's picture
Upload runs/ccc_lambda/lam0.75_seed0/summary.json with huggingface_hub
599bbbf verified
Raw
History Blame Contribute Delete
15.9 kB
{
"line": "C32",
"truth": "/mnt/ssd/scdistill_data/arc_data/tahoe_holdout_h5ad/c26.h5ad",
"plate_filter": "plate10",
"train_plates": "all",
"split_toml": "/mnt/ssd/scdistill_data/arc_state_se/st_hvg_tahoe/fewshot/generalization.toml",
"teacher_sim": "/mnt/ssd/scdistill_data/scdistill_fewshot/C32_simulated_fewshot.h5ad",
"fewshot_test_only": true,
"inductive": false,
"kd_space": "raw",
"null_teacher": "none",
"student_arch": "state_xs",
"steps": 800000,
"bs": 256,
"dim": 2000,
"seed": 0,
"n_drugs": 417,
"distill_mode": "energy",
"param_total_m": 3.211472,
"param_active_m": 3.211472,
"flow_pairing": "ot",
"flow_rollout": "onpolicy",
"flow_roll_steps": 4,
"flow_lambda": 0.1,
"flow_end_steps": 4,
"ode_steps": 10,
"ode_method": "euler",
"val_frac": 0.15,
"eval_every": 1000,
"val_policy": "strict",
"val_target": "own",
"val_metric": "pearson_delta",
"val_inductive_frac": 0.0,
"log_test_trace": false,
"n_inductive_val_perts": 0,
"val_on_state_val": false,
"val_mode": "transductive",
"n_state_val_perts": 0,
"early_stop_patience": 200,
"early_stop_min_delta": 0.0001,
"early_stop_ema": 0.3,
"early_stop_min_steps": 120000,
"distill_residual": false,
"shape_gamma": 0.0,
"shape_n_proj": 50,
"shape_var_gamma": 0.0,
"shape_in_whitened": false,
"shape_whiten_rank": 0,
"wkdf_gamma": 1.0,
"wkdf_ratio": 2.0,
"wkdf_eps": 1e-05,
"wkdf_shape_gamma": 0.0,
"wkdf_shape_mode": "centred",
"reward_gamma": 0.0,
"reward_scramble": false,
"feat_gamma": 0.0,
"featalign_scramble": false,
"huber_gamma": 0.0,
"huber_delta": 0.9,
"teacher_denoise_rank": 0,
"teacher_denoise_mode": "truncate",
"fusion_mode": "off",
"fusion_scramble": false,
"laplacian_gamma": 0.0,
"laplacian_k": 15,
"laplacian_normalized": 1,
"laplacian_scramble": false,
"whiten_rank": 0,
"whiten_alpha": 1.0,
"whiten_shrink": 0.05,
"whiten_gmin": 0.2,
"whiten_gmax": 3.0,
"whiten_source": "delta",
"mbar_l2_norm": null,
"convergence": {
"distilled_plus_wkdf_ccc": {
"best_step": 228000,
"best_val": 0.6867755717735466,
"final_val": 0.6727667276463446,
"n_evals": 423,
"validated": true,
"val_trace": [
0.14899125238189456,
0.43861951810026684,
0.42913609283542703,
0.4552731198709707,
0.45646102142446204,
0.46306755020543167,
0.5338080952633116,
0.5312847297229524,
0.5258035374686202,
0.4899855986001081,
0.5534570366458236,
0.5628480691654172,
0.5531610865222295,
0.5731999389311572,
0.5606979282971752,
0.5667163295467399,
0.5721236518856845,
0.5842686972468606,
0.602914041862294,
0.5900092806211461,
0.6013251365110798,
0.6083039399036375,
0.6163666213571847,
0.6065531031073392,
0.6285421745494271,
0.6270208112006643,
0.6306732533913214,
0.6341260110471405,
0.6342986128059693,
0.6372323092603445,
0.6387715787095025,
0.62936414185886,
0.6339426065308175,
0.6426560643395991,
0.6376391157254587,
0.645096834152399,
0.6571137901857486,
0.6524171311538768,
0.65384185489148,
0.6594246468570782,
0.6630402952660739,
0.6584075323165813,
0.6629229395144542,
0.6646784952623938,
0.6566005787344742,
0.6717964835867611,
0.6703955814187035,
0.6507490314394662,
0.6636353104157933,
0.6645352190662737,
0.6690411888445857,
0.6649544719588013,
0.669468486194927,
0.6666173985011155,
0.6646267547717224,
0.6724642617599642,
0.6458264516461207,
0.6682229157455073,
0.6668454266423296,
0.6570211891701649,
0.6722220701485602,
0.6684837701858733,
0.6803700799016346,
0.6732218961341969,
0.666603113785604,
0.6704476329120467,
0.6729203938857289,
0.6670688841942944,
0.6690750775802761,
0.676343005997045,
0.6749665854825249,
0.6749431595070048,
0.6818760842049476,
0.6504294815873044,
0.6773061671324015,
0.6811136048268486,
0.6711001263036216,
0.6789263914297788,
0.6795147358720482,
0.6754301261702805,
0.6735584520830786,
0.6767741870203404,
0.6734776004761606,
0.6741952870629881,
0.6798330140513762,
0.6768644366252116,
0.6781755106042225,
0.6804081383880017,
0.6679237676327987,
0.6661547102793913,
0.6776820696517384,
0.676593383797852,
0.6794654406383223,
0.6769275649437343,
0.6746443159515685,
0.676903025246743,
0.6823884075004323,
0.6812460545432933,
0.6801442775939943,
0.6814089834084268,
0.6841749741168904,
0.6783338902271124,
0.6858993623871192,
0.6808351692877715,
0.6792760534575067,
0.6792372686949534,
0.6815952652585463,
0.6832250888312412,
0.678815073070839,
0.6815736630372209,
0.6800742243662639,
0.6761974755744793,
0.6845270774678773,
0.6796754133326016,
0.6796813094029818,
0.6781704308331215,
0.6851913119506741,
0.685596557611319,
0.6843032379902423,
0.6733443486228161,
0.6786135930328042,
0.683935191082677,
0.6810126439401321,
0.6822011951979434,
0.6852932988177185,
0.6785713550385001,
0.685935160185218,
0.6759658362940267,
0.6730666180897401,
0.6830232424352188,
0.6853299356707956,
0.6816666490178447,
0.6851230335608666,
0.6766409243708768,
0.681347091882566,
0.6814961794809031,
0.6829745627274049,
0.6822173673248264,
0.6824235979643012,
0.679822440790681,
0.6723275233486962,
0.6832403722323496,
0.6839731147034923,
0.6834189155615447,
0.6832728306303468,
0.665074056288018,
0.6840031997452637,
0.6857712863546256,
0.6769838619826092,
0.6818100014564238,
0.6729270495911205,
0.6788855471312613,
0.6832889583643816,
0.684417208227525,
0.6847992557575902,
0.6798400405081003,
0.682234044777556,
0.6819091521686085,
0.6834281628487263,
0.6824375459738418,
0.684385805328591,
0.6850500283215828,
0.685472285785846,
0.684715540706176,
0.6791329240487763,
0.6829195562841354,
0.6831783827538942,
0.6818503321354955,
0.6845395096120457,
0.6796065457519158,
0.6837103983392423,
0.6829669367167839,
0.6822512252923876,
0.6761417381590885,
0.6851711448046014,
0.6814834683170756,
0.6812600463179488,
0.6829762133072129,
0.6832859653591786,
0.6802130685325065,
0.6827865554911459,
0.6748271115491089,
0.6745968506071269,
0.6824802366640113,
0.6849478524628945,
0.6841244513804355,
0.680963752657999,
0.6784421803186859,
0.6850521340180727,
0.6798906340255465,
0.6835609025456847,
0.6849018647310657,
0.6756458849071424,
0.6811223143347379,
0.6832184374168768,
0.6776257235696863,
0.678875810509345,
0.6837251505084475,
0.6774037482759824,
0.6824423786497043,
0.683963093335516,
0.6806082554253227,
0.6801797364238106,
0.6816782246284131,
0.6819318623200907,
0.6814353003640601,
0.6849467094723123,
0.6804688004935822,
0.6825279217768552,
0.6795215166422108,
0.6828244222122999,
0.6819186235476568,
0.6772309009135747,
0.6802711824522184,
0.6832629572651775,
0.6833464690581013,
0.6846749148148029,
0.6850608712101541,
0.6800334614527965,
0.6768396209751378,
0.6831422266515973,
0.685156630220395,
0.6862794270748982,
0.6846220840125818,
0.6826973260827028,
0.6824913610082594,
0.6834330790887017,
0.6818652035903714,
0.6867755717735466,
0.6816722992451161,
0.6824382977270113,
0.6844225467325201,
0.6841098741147721,
0.6833029321143768,
0.6859345787381189,
0.6845978254426007,
0.6808978871979969,
0.6839994773257096,
0.6838354516172847,
0.6811485551618017,
0.6832106155452289,
0.6859280688607512,
0.6817467684440652,
0.6845393571170884,
0.6850197374961072,
0.6791027174762866,
0.6833696717756766,
0.6838846235259317,
0.6813975099171353,
0.6819345236206128,
0.6835221277728903,
0.6834359581307933,
0.6838169750670018,
0.6837118149279278,
0.6846163195984951,
0.68302270180856,
0.6820955515834742,
0.6831429947318957,
0.6835476259866993,
0.6794565119075009,
0.6821013995470308,
0.6867638539491823,
0.6830754219705168,
0.680370041483327,
0.6856458528614492,
0.679677311283049,
0.6818715119649452,
0.6826511681684881,
0.684569549299175,
0.6819722224993212,
0.6822355637495634,
0.6805880580567312,
0.6795472736828685,
0.6859296191233928,
0.6833484798100805,
0.6813002403206156,
0.6809750347292203,
0.6824889141013059,
0.6848530200851664,
0.6856931167133561,
0.6805576180218867,
0.6797162278847054,
0.6808062833220534,
0.682135373625553,
0.683773264371216,
0.6758756207511881,
0.6838448446532135,
0.6787235578845656,
0.6774940128193769,
0.6822430718064741,
0.6748567273617918,
0.681891796935958,
0.6781860716836191,
0.6844935682170593,
0.6786831447390892,
0.6840041471713119,
0.6830023363487557,
0.6839849648573935,
0.6828809169399399,
0.6819674359418079,
0.6811209163484904,
0.6832942871500731,
0.6801318565710166,
0.6745409595094777,
0.6798989174083502,
0.6808924463735805,
0.6791187692215883,
0.6821513740556802,
0.6827841332905655,
0.6792678086149118,
0.6818747435579714,
0.6831342248019265,
0.6811456578579816,
0.6776017507465921,
0.6839469750772784,
0.6835173787442174,
0.6824717467099921,
0.6804868813009299,
0.682576701956175,
0.680694900299676,
0.6812389573430184,
0.6798338556177626,
0.6831061460967955,
0.6789476391599587,
0.681581936430693,
0.6846683553795236,
0.6819951027797148,
0.6788765398751312,
0.6824148512254372,
0.6842790557928194,
0.6803921119167162,
0.6806880506216797,
0.6821108887655403,
0.6798932393045135,
0.680879775828635,
0.6791056045895494,
0.6855028807280339,
0.6778856995417798,
0.6744220455680768,
0.6836614443984821,
0.6826742159805333,
0.683659860012215,
0.6809213827381573,
0.6795575584106914,
0.6786166171629503,
0.6810993251833025,
0.6812756226318624,
0.6754527927457257,
0.6825292072570265,
0.6792451041298261,
0.6747557673398314,
0.6769436804864041,
0.6803628182342218,
0.6789202366327028,
0.6815991166569534,
0.677133186376854,
0.6831858630843038,
0.6796304826108164,
0.6816160111386996,
0.6798349381496198,
0.6822219295785581,
0.6820958052470527,
0.6785444279537226,
0.6809057369616129,
0.6775991659269408,
0.6752717577073033,
0.6802290603156169,
0.6824489652206505,
0.6792868214688449,
0.6786685886975675,
0.6766076423177186,
0.6796818868426562,
0.6803060379374254,
0.6813945322486521,
0.6770468074888307,
0.6801210418083152,
0.6808180261723837,
0.6797171687339522,
0.6840145471024657,
0.6807636624213927,
0.6817010697668435,
0.68110043644609,
0.676745728760981,
0.6804138390496662,
0.6803760073387796,
0.6801228311527114,
0.6829101983892445,
0.6823152453859032,
0.6791346402623382,
0.6814388906118135,
0.6818313703230633,
0.6801134465212375,
0.6766813549404165,
0.6745826201476173,
0.6778005276087855,
0.6762642827907072,
0.6773894847292379,
0.6821644294974017,
0.6844184560361404,
0.6793280154941803,
0.683708628761978,
0.6751257441502306,
0.6743833409827058,
0.6763422776477993,
0.6832301346096764,
0.6825579100166044,
0.6806244082881453,
0.6720496302136294,
0.6764317672236353,
0.6804464175419571,
0.6810453435624784,
0.6810554655413161,
0.6785807510469809,
0.6790528789626611,
0.6809107304791477,
0.6790207005168751,
0.6800589269515994,
0.6804431560810176,
0.680701880608598,
0.6825650089801173,
0.6800158986298404,
0.6806159655540261,
0.6727667276463446
],
"val_metric": "pearson_delta",
"test_trace": null,
"val_alt_trace": null,
"val_alt_metric": "energy",
"early_stopped": true,
"stop_step": 422000,
"ceiling": 800000,
"undertrained": false,
"ema_decay": null,
"ema_val_trace": null,
"ema_test_trace": null,
"ema_final_test": null,
"ema_best_step": null,
"genfrontier_selected": "best_val",
"genfrontier_val": 0.6867755717735466,
"swa_frac": null,
"swa_tail_n": 0
}
},
"protocol": {
"mode": "production",
"family": "cell",
"select_metric": "pearson_delta",
"val_metric": "pearson_delta",
"ceiling": 800000,
"eval_every": 1000,
"val_frac": 0.15,
"val_mode": "transductive",
"early_stop_patience": 200,
"early_stop_min_steps": 120000,
"arms": {
"distilled_plus_wkdf_ccc": {
"best_step": 228000,
"early_stopped": true,
"stop_step": 422000,
"ceiling": 800000,
"undertrained": false
}
},
"undertrained": false,
"trained_to_full": true,
"canonical": "select_metric=pearson_delta val_frac=0.15 eval_every=1000 early_stop_patience=200 early_stop_min_delta=0.0001 early_stop_ema=0.3 early_stop_min_steps=120000 ceiling=800000 (backstop; early-stop fires first, but never before min_steps)"
},
"n_toml_test": 735,
"n_split_test": 735,
"n_split_train": 348,
"n_eval_perts": 70,
"n_real_train_perts": 347,
"energy": {
"distilled_plus_wkdf_ccc": {
"n_perts": 70,
"median_energy_to_truth": 1.9712638854980469
},
"teacher": {
"n_perts": 70,
"median_energy_to_truth": 0.13015079498291016
},
"mean": {
"n_perts": 70,
"median_energy_to_truth": 0.2804889678955078
}
}
}