Datasets:
File size: 1,078 Bytes
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language:
- en
license: mit
size_categories:
- 100K<n<1M
task_categories:
- other
pretty_name: Protap
tags:
- biology
configs:
- config_name: AFP
data_files:
- split: test
path:
- AFP/nrPDB-GO_test.csv
- config_name: PCSP
data_files:
- split: train
path:
- PCSP/train_C14005.pkl
- PCSP/train_M10003.pkl
- split: test
path:
- PCSP/test_C14005.pkl
- PCSP/test_M10003.pkl
- config_name: PLI_DAVIS
data_files:
- split: test
path:
- PLI_DAVIS/davis_drug_pdb_data.txt
- PLI_DAVIS/pli_structure.json
- PLI_DAVIS/data/*
- config_name: PROTACs
data_files:
- split: test
path:
- PROTACs/PROTAC_clean_structure_label.txt
- PROTACs/protac_poi_e3ligase_structure.json
- PROTACs/e3_ligand/*
- PROTACs/linker/*
- PROTACs/warhead/*
---
This dataset is for the paper [Protap: A Benchmark for Protein Modeling on Realistic Downstream Applications](https://huggingface.co/papers/2506.02052).
The code for Protap is available at [https://github.com/findshuo/Protap](https://github.com/findshuo/Protap). |