Update README.md
Browse files
README.md
CHANGED
|
@@ -4,11 +4,13 @@
|
|
| 4 |
{}
|
| 5 |
---
|
| 6 |
|
| 7 |
-
# Dataset Card for
|
| 8 |
|
| 9 |
<!-- Provide a quick summary of the dataset. -->
|
| 10 |
|
| 11 |
-
This
|
|
|
|
|
|
|
| 12 |
|
| 13 |
## Dataset Details
|
| 14 |
|
|
@@ -16,12 +18,12 @@ This dataset card aims to be a base template for new datasets. It has been gener
|
|
| 16 |
|
| 17 |
<!-- Provide a longer summary of what this dataset is. -->
|
| 18 |
|
|
|
|
|
|
|
|
|
|
| 19 |
|
| 20 |
|
| 21 |
-
- **Curated by:**
|
| 22 |
-
- **Funded by [optional]:** [More Information Needed]
|
| 23 |
-
- **Shared by [optional]:** [More Information Needed]
|
| 24 |
-
- **Language(s) (NLP):** [More Information Needed]
|
| 25 |
- **License:** [More Information Needed]
|
| 26 |
|
| 27 |
### Dataset Sources [optional]
|
|
@@ -30,7 +32,6 @@ This dataset card aims to be a base template for new datasets. It has been gener
|
|
| 30 |
|
| 31 |
- **Repository:** [More Information Needed]
|
| 32 |
- **Paper [optional]:** [More Information Needed]
|
| 33 |
-
- **Demo [optional]:** [More Information Needed]
|
| 34 |
|
| 35 |
## Uses
|
| 36 |
|
|
@@ -50,55 +51,47 @@ This dataset card aims to be a base template for new datasets. It has been gener
|
|
| 50 |
|
| 51 |
## Dataset Structure
|
| 52 |
|
| 53 |
-
|
| 54 |
|
| 55 |
-
|
| 56 |
|
| 57 |
-
|
|
|
|
| 58 |
|
| 59 |
-
|
| 60 |
|
| 61 |
-
|
|
|
|
| 62 |
|
| 63 |
-
|
| 64 |
|
| 65 |
-
|
|
|
|
| 66 |
|
| 67 |
-
|
| 68 |
|
| 69 |
-
#### Data Collection and Processing
|
| 70 |
|
| 71 |
-
<!-- This section describes the data collection and processing process such as data selection criteria, filtering and normalization methods, tools and libraries used, etc. -->
|
| 72 |
|
| 73 |
[More Information Needed]
|
| 74 |
|
| 75 |
-
##
|
| 76 |
-
|
| 77 |
-
<!-- This section describes the people or systems who originally created the data. It should also include self-reported demographic or identity information for the source data creators if this information is available. -->
|
| 78 |
|
| 79 |
-
|
| 80 |
|
| 81 |
-
|
| 82 |
|
| 83 |
-
|
| 84 |
|
| 85 |
#### Annotation process
|
| 86 |
|
| 87 |
-
|
| 88 |
|
| 89 |
[More Information Needed]
|
| 90 |
|
| 91 |
-
#### Who are the annotators?
|
| 92 |
-
|
| 93 |
-
<!-- This section describes the people or systems who created the annotations. -->
|
| 94 |
-
|
| 95 |
-
[More Information Needed]
|
| 96 |
|
| 97 |
#### Personal and Sensitive Information
|
| 98 |
|
| 99 |
-
|
| 100 |
-
|
| 101 |
-
[More Information Needed]
|
| 102 |
|
| 103 |
## Bias, Risks, and Limitations
|
| 104 |
|
|
@@ -134,10 +127,10 @@ Users should be made aware of the risks, biases and limitations of the dataset.
|
|
| 134 |
|
| 135 |
[More Information Needed]
|
| 136 |
|
| 137 |
-
## Dataset Card Authors
|
| 138 |
|
| 139 |
-
|
| 140 |
|
| 141 |
## Dataset Card Contact
|
| 142 |
|
| 143 |
-
|
|
|
|
| 4 |
{}
|
| 5 |
---
|
| 6 |
|
| 7 |
+
# Dataset Card for PoreSimNet-Data
|
| 8 |
|
| 9 |
<!-- Provide a quick summary of the dataset. -->
|
| 10 |
|
| 11 |
+
This is the HuggingFace storage location for all of the training data for the PoreSimNet project.
|
| 12 |
+
|
| 13 |
+
The PoreSimNet GitHub repository can be found [here](https://github.com/flowlabcu/ClotSimNet).
|
| 14 |
|
| 15 |
## Dataset Details
|
| 16 |
|
|
|
|
| 18 |
|
| 19 |
<!-- Provide a longer summary of what this dataset is. -->
|
| 20 |
|
| 21 |
+
This dataset contains both 2D and 3D simulations from running computational fluid dynamics (CFD) simulations through porous media. All of the simulations were written in [FLATiron](https://github.com/flowlabcu/FLATiron) FLOWLab's finite-element CFD library built on top of FEniCS.
|
| 22 |
+
|
| 23 |
+
It contains roughly 5,000 2D simulations of 2mm x 1mm porous media flows simulating passive contrast agent as it passes through the interstitial space of each simulation.
|
| 24 |
|
| 25 |
|
| 26 |
+
- **Curated by:** Josh Gregory
|
|
|
|
|
|
|
|
|
|
| 27 |
- **License:** [More Information Needed]
|
| 28 |
|
| 29 |
### Dataset Sources [optional]
|
|
|
|
| 32 |
|
| 33 |
- **Repository:** [More Information Needed]
|
| 34 |
- **Paper [optional]:** [More Information Needed]
|
|
|
|
| 35 |
|
| 36 |
## Uses
|
| 37 |
|
|
|
|
| 51 |
|
| 52 |
## Dataset Structure
|
| 53 |
|
| 54 |
+
### MLPs
|
| 55 |
|
| 56 |
+
In 2D, the following applicable MLP training data files are:
|
| 57 |
|
| 58 |
+
- `mlp_data_5k` (both CSV and Parquet versions): Contain first-order and higher-order texture image features for 5,000 2D porous media flows.
|
| 59 |
+
- `mlp_data_test` (both CSV and Parquet versions): Contain the full evaluation dataset (~1000 simulations) to evaluate the trained MLPs on.
|
| 60 |
|
| 61 |
+
There are also two special files, with both CSV and Parquet versions:
|
| 62 |
|
| 63 |
+
- `mlp_data_aug_vert_horiz_flip`: This contains the evaluation dataset that has undergone image augmentation before image feature extraction has been performed. Specifically, vertical and horizontal flips with a 50% probability of each.
|
| 64 |
+
- `mlp_data_aug_cnn_pipe`: This contains the evaluation dataset that has undergone image augmentation before image feature extraction has been performed in the same pipeline as the CNN networks.
|
| 65 |
|
| 66 |
+
In 3D, the following applicable MLP training data files are:
|
| 67 |
|
| 68 |
+
- `mlp_data_3d_100` (both CSV and Parquet versions): Contain first-order and higher-order texture image features for 100 3D porous media flows.
|
| 69 |
+
- `mlp_data_3d_100` (both CSV and Parquet versions): Contain first-order and higher-order texture image features for 300 3D porous media flows.
|
| 70 |
|
| 71 |
+
### CNNs
|
| 72 |
|
|
|
|
| 73 |
|
|
|
|
| 74 |
|
| 75 |
[More Information Needed]
|
| 76 |
|
| 77 |
+
## Dataset Creation
|
|
|
|
|
|
|
| 78 |
|
| 79 |
+
### Curation Rationale
|
| 80 |
|
| 81 |
+
<!-- Motivation for the creation of this dataset. -->
|
| 82 |
|
| 83 |
+
[More Information Needed]
|
| 84 |
|
| 85 |
#### Annotation process
|
| 86 |
|
| 87 |
+
Each simulation had its permeability calcualted using Darcy's Law. For the MLP networks, this became a column labeled `k`, and for each CNN network was embedded into each image's EXIF metadata as a user comment.
|
| 88 |
|
| 89 |
[More Information Needed]
|
| 90 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 91 |
|
| 92 |
#### Personal and Sensitive Information
|
| 93 |
|
| 94 |
+
This dataset does not include any personal and sensitive information.
|
|
|
|
|
|
|
| 95 |
|
| 96 |
## Bias, Risks, and Limitations
|
| 97 |
|
|
|
|
| 127 |
|
| 128 |
[More Information Needed]
|
| 129 |
|
| 130 |
+
## Dataset Card Authors
|
| 131 |
|
| 132 |
+
Josh Gregory
|
| 133 |
|
| 134 |
## Dataset Card Contact
|
| 135 |
|
| 136 |
+
Debanjan Mukherjee: debanjan@colorado.edu
|