diff --git "a/all_samples.csv" "b/all_samples.csv" new file mode 100644--- /dev/null +++ "b/all_samples.csv" @@ -0,0 +1,2889 @@ +,Sample name,Paper identifier,Organism,Protocol,Cell type,Treatment,Replicate,Read depth,QC score +1,ERR769522,Laitem2015cdk9,H. sapiens,GRO-seq,HeLa (cell line),DRB (30min),1,20M,4 +2,ERR769523,Laitem2015cdk9,H. sapiens,GRO-seq,HeLa (cell line),KM05283 (30min),1,23M,4 +3,ERR769524,Laitem2015cdk9,H. sapiens,GRO-seq,HeLa (cell line),nan,1,24M,2 +4,ERR769525,Laitem2015cdk9,H. sapiens,GRO-seq,HeLa (cell line),nan,2,26M,2 +5,SRM497904,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol,1,40M,3 +6,SRM497907,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol,2,49M,2 +7,SRM497911,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),1,41M,2 +8,SRM497912,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),2,52M,3 +9,SRM497914,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,46M,2 +10,SRM497917,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,38M,2 +11,SRR064994,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),nan,1,6M,4 +12,SRR065240,Escoubet-lozach2011mechanisms,M. musculus,GRO-seq,peritoneal macrophage (primary),DMSO (1hr),1,8M,4 +13,SRR065241,Escoubet-lozach2011mechanisms,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),1,8M,4 +14,SRR073010,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),nan,2,11M,4 +15,SRR091798,Ji2011transcriptional,M. musculus,GRO-seq,C2C12 (cell line),nan,1,17M,2 +16,SRR097862,Min2011regulating,M. musculus,GRO-seq,ESC (cell line),nan,3,8M,4 +17,SRR097863,Min2011regulating,M. musculus,GRO-seq,MEF (primary),nan,1,8M,4 +18,SRR097864,Min2011regulating,M. musculus,GRO-seq,MEF (primary),nan,2,7M,4 +19,SRR10063517,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),growth media (6hr),1,19M,2 +20,SRR10063518,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),growth media (6hr),2,9M,4 +21,SRR10063519,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),hypoxia (6hr),1,18M,2 +22,SRR10063520,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),hypoxia (6hr),2,8M,4 +23,SRR10063521,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),oxPAPC (6hr),1,15M,3 +24,SRR10063522,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),oxPAPC (6hr),2,11M,3 +25,SRR10063523,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),"hypoxia (6hr) , oxPAPC (6hr)",1,16M,2 +26,SRR10063524,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),"hypoxia (6hr) , oxPAPC (6hr)",2,16M,2 +27,SRR10063525,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),growth media (6hr),1,19M,2 +28,SRR10063526,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),growth media (6hr),2,15M,2 +29,SRR10063527,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (6hr),1,15M,3 +30,SRR10063528,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (6hr),2,17M,2 +31,SRR10063529,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (6hr),3,13M,3 +32,SRR10063530,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),oxPAPC (6hr),1,99M,4 +33,SRR10063531,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),oxPAPC (6hr),2,14M,3 +34,SRR10063532,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),oxPAPC (6hr),3,12M,3 +35,SRR10063533,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),"hypoxia (6hr) , oxPAPC (6hr)",1,51M,4 +36,SRR10063534,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),"hypoxia (6hr) , oxPAPC (6hr)",2,16M,2 +37,SRR10063535,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),"hypoxia (6hr) , oxPAPC (6hr)",3,14M,3 +38,SRR10063536,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HASM (primary),growth media (6hr),1,14M,3 +39,SRR10063537,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HASM (primary),growth media (6hr),2,23M,2 +40,SRR10063540,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HASM (primary),oxPAPC (6hr),1,17M,2 +41,SRR10063541,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HASM (primary),oxPAPC (6hr),2,7M,4 +42,SRR10063544,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,CD14+ macrophage (primary),growth media (6hr),1,19M,2 +43,SRR10063545,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,CD14+ macrophage (primary),growth media (6hr),2,26M,2 +44,SRR10063548,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,CD14+ macrophage (primary),oxPAPC (6hr),1,18M,2 +45,SRR10067473,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),nan,1,41M,2 +46,SRR10067474,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),nan,2,23M,1 +47,SRR10067475,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),JQ1 (2hr),1,29M,2 +48,SRR10067476,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),JQ1 (2hr),2,15M,2 +49,SRR10067477,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),LBH589 (2hr),1,51M,2 +50,SRR10067478,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),LBH589 (2hr),2,10M,3 +51,SRR10067479,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),LBH589 (6hr),1,30M,1 +52,SRR10067480,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),LBH589 (6hr),2,42M,2 +53,SRR1015583,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),nan,1,22M,1 +54,SRR1015584,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),nan,2,23M,1 +55,SRR1015585,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (10min),1,21M,1 +56,SRR1015586,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (10min),2,18M,2 +57,SRR1015587,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (30min),1,16M,2 +58,SRR1015588,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (30min),2,21M,1 +59,SRR1015589,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (2hr),1,20M,2 +60,SRR1015590,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (2hr),2,24M,1 +61,SRR1015591,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),DMSO (15min),1,77M,1 +62,SRR1015592,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),DMSO (15min),2,55M,1 +63,SRR1015593,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),nan,1,130M,3 +64,SRR1015594,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),nan,2,154M,4 +65,SRR10282967,Komarov2020epigenetic,D. melanogaster,GRO-seq,ovary (tissue),nan,1,25M,3 +66,SRR10282968,Komarov2020epigenetic,D. melanogaster,GRO-seq,ovary (tissue),nan,1,23M,3 +67,SRR10298307,Li2021comprehensive,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,64M,2 +68,SRR10298308,Li2021comprehensive,H. sapiens,GRO-seq,MCF7 (cell line),nan,2,49M,1 +69,SRR10298309,Li2021comprehensive,H. sapiens,GRO-seq,MDA-MB-231 (cell line),nan,1,59M,1 +70,SRR10298310,Li2021comprehensive,H. sapiens,GRO-seq,MDA-MB-231 (cell line),nan,2,115M,2 +71,SRR10312745,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain Towne IE2 BAC (4day)",1,28M,2 +72,SRR10312746,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain Towne IE2 BAC (4day) , dTag7 (6hr)",1,29M,3 +73,SRR10312747,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain Towne IE2F BAC (4day)",1,29M,2 +74,SRR10312748,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain Towne IE2F BAC (4day) , dTag7 (6hr)",1,25M,3 +75,SRR10312749,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain Towne IE2 BAC (4day) , flavopiridol (1hr)",1,27M,3 +76,SRR10312750,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain Towne IE2 BAC (4day) , dTag7 (6hr) , flavopiridol (1hr)",1,28M,3 +77,SRR10312751,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain Towne IE2F BAC (4day) , flavopiridol (1hr)",1,28M,3 +78,SRR10312752,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain Towne IE2F BAC (4day) , dTag7 (6hr) , flavopiridol (1hr)",1,31M,3 +79,SRR10312753,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain TB40/E IE2F (3day)",1,38M,4 +80,SRR10312754,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2F (3day) , dTag7 (6hr)",1,43M,3 +81,SRR10312755,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain TB40/E IE2F (3day) , flavopiridol (1hr)",1,40M,3 +82,SRR10312756,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2F (3day) , dTag7 (6hr) , flavopiridol (1hr)",1,36M,4 +83,SRR10312757,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain TB40/E IE2F (3day)",2,38M,4 +84,SRR10312758,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2F (3day) , dTag7 (6hr)",2,26M,5 +85,SRR10312759,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain TB40/E IE2F (3day) , phosphonoformic acid (6hr)",1,42M,3 +86,SRR10312760,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2F (3day) , dTag7 (6hr) , phosphonoformic acid (6hr)",1,39M,4 +87,SRR10312761,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),HCMV strain TB40/E IE2 (1day),1,36M,3 +88,SRR10312762,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),HCMV strain TB40/E IE2 (3day),1,33M,3 +89,SRR10312763,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2 (3day) , phosphonoformic acid (3day)",1,24M,4 +90,SRR10354624,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (2hr),1,77M,1 +91,SRR10354625,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (2hr),2,67M,1 +92,SRR10354626,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (2hr),1,74M,2 +93,SRR10354627,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (2hr),2,83M,1 +94,SRR10354653,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , DMSO (2hr)",1,57M,1 +95,SRR10354654,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , DMSO (2hr)",2,60M,1 +96,SRR10354655,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (2hr)",1,63M,1 +97,SRR10354656,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (2hr)",2,69M,1 +98,SRR10354657,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , NVP2 (30min)",1,59M,2 +99,SRR10354658,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , NVP2 (30min)",2,55M,1 +100,SRR10354659,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , NVP2 (30min) , dTAG7 (2hr)",1,58M,1 +101,SRR10354660,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , NVP2 (30min) , dTAG7 (2hr)",2,59M,1 +102,SRR1035898,Kaikkonen2014control,H. sapiens,GRO-seq,HUVEC (primary),nan,1,17M,2 +103,SRR1035899,Kaikkonen2014control,H. sapiens,GRO-seq,HUVEC (primary),VEGF-A165 (2hr),1,18M,2 +104,SRR1035900,Kaikkonen2014control,H. sapiens,GRO-seq,HAEC (primary),nan,1,22M,2 +105,SRR1035901,Kaikkonen2014control,H. sapiens,GRO-seq,HAEC (primary),VEGF-A165 (2hr),1,15M,2 +106,SRR10400216,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"vehicle (22hr) , vehicle (6hr)",1,37M,1 +107,SRR10400217,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"vehicle (22hr) , vehicle (6hr)",2,23M,1 +108,SRR10400218,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"hydroxytamoxifen (6hr) , vehicle (22hr)",1,26M,1 +109,SRR10400219,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"hydroxytamoxifen (6hr) , vehicle (22hr)",2,25M,1 +110,SRR10400220,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"doxycycline (22hr) , vehicle (6hr)",1,38M,1 +111,SRR10400221,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"doxycycline (22hr) , vehicle (6hr)",2,28M,1 +112,SRR10400222,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"doxycycline (22hr) , hydroxytamoxifen (6hr)",1,28M,1 +113,SRR10400223,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"doxycycline (22hr) , hydroxytamoxifen (6hr)",2,32M,1 +114,SRR1041870,Miller2015senataxin,H. sapiens,GRO-seq,A549 (cell line),nan,1,142M,5 +115,SRR1041871,Miller2015senataxin,H. sapiens,GRO-seq,A549 (cell line),influenza virus strain PR8-delta-NS1 (4hr),1,130M,5 +116,SRR1041872,Miller2015senataxin,H. sapiens,GRO-seq,A549 (cell line),nan,1,159M,5 +117,SRR1041873,Miller2015senataxin,H. sapiens,GRO-seq,A549 (cell line),influenza virus strain PR8-delta-NS1 (4hr),1,141M,5 +118,SRR10439768,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),nan,1,22M,5 +119,SRR10439769,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),nan,2,14M,5 +120,SRR10439770,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),"PD0325901 , CHIR99021",1,25M,5 +121,SRR10439771,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),"PD0325901 , CHIR99021",2,20M,5 +122,SRR10439772,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),nan,1,28M,5 +123,SRR10439773,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),nan,2,18M,5 +124,SRR10441340,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,30M,1 +125,SRR10441341,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,31M,1 +126,SRR10441342,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,30M,1 +127,SRR10441343,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,31M,1 +128,SRR10441344,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,31M,1 +129,SRR10441345,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,33M,1 +130,SRR10441346,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,10M,4 +131,SRR10441347,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,19M,2 +132,SRR10441348,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,17M,2 +133,SRR10441349,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,16M,2 +134,SRR10441350,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,18M,2 +135,SRR10441351,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,13M,3 +136,SRR10441352,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,12M,3 +137,SRR10441353,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,11M,3 +138,SRR10441354,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,15M,3 +139,SRR10441355,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,11M,3 +140,SRR10441356,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,5M,4 +141,SRR10441357,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,16M,2 +142,SRR10441358,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,6M,4 +143,SRR10441359,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,17M,2 +144,SRR10441360,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,20M,1 +145,SRR10441361,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,8M,4 +146,SRR10441362,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,22M,1 +147,SRR10441363,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,13M,3 +148,SRR10486671,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),1,24M,3 +149,SRR10486672,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),2,21M,3 +150,SRR10486673,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),3,30M,3 +151,SRR10486674,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),1,62M,2 +152,SRR10486675,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),2,26M,2 +153,SRR10486676,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),3,58M,5 +154,SRR10486677,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),1,24M,3 +155,SRR10486678,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),2,21M,3 +156,SRR10486679,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),3,25M,4 +157,SRR10486680,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),1,65M,2 +158,SRR10486681,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),2,55M,1 +159,SRR10486682,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),3,147M,3 +160,SRR10502417,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , acyclovir (5hr)",1,27M,2 +161,SRR10502418,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , acyclovir (5hr)",2,32M,1 +162,SRR10502419,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , DMSO (6hr)",1,23M,3 +163,SRR10502420,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , DMSO (6hr)",2,28M,2 +164,SRR10502421,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , flavopiridol (6hr)",1,27M,3 +165,SRR10502422,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , flavopiridol (6hr)",2,28M,3 +166,SRR10582180,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , DMSO (20min)",1,36M,1 +167,SRR10582181,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"1-NM-PP1 (20min) , 4-thiouridine (5min)",1,31M,1 +168,SRR10582182,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , DMSO (20min)",1,34M,1 +169,SRR10582183,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"1-NM-PP1 (20min) , 4-thiouridine (5min)",1,31M,1 +170,SRR10582184,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , DMSO (20min)",1,33M,1 +171,SRR10582185,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"1-NM-PP1 (20min) , 4-thiouridine (5min)",1,33M,1 +172,SRR10582186,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , DMSO (20min)",1,30M,1 +173,SRR10582187,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"1-NM-PP1 (20min) , 4-thiouridine (5min)",1,32M,1 +174,SRR10582188,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , AZ'5576 (20min)",1,31M,1 +175,SRR10582189,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , DMSO (20min)",1,32M,1 +176,SRR10582190,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"1-NM-PP1 (20min) , 4-thiouridine (5min)",1,31M,1 +177,SRR10582201,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),DMSO (4hr),1,47M,2 +178,SRR10582202,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),THZ531 (4hr),1,29M,1 +179,SRR10582203,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),THZ531 (4hr),1,24M,2 +180,SRR10582204,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,38M,2 +181,SRR10582205,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , THZ531 (4hr)",1,25M,3 +182,SRR10582206,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , THZ531 (4hr)",1,25M,3 +183,SRR10582207,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,28M,2 +184,SRR10582208,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , THZ531 (4hr)",1,24M,2 +185,SRR10582209,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , THZ531 (4hr)",1,31M,3 +186,SRR10582210,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,35M,2 +187,SRR10582211,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , THZ531 (4hr)",1,25M,2 +188,SRR10582212,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , THZ531 (4hr)",1,31M,3 +189,SRR10582213,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,27M,2 +190,SRR10582214,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , THZ531 (4hr)",1,29M,2 +191,SRR10582215,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , THZ531 (4hr)",1,30M,2 +192,SRR10582216,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),various,1,69M,4 +193,SRR10582250,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,25M,1 +194,SRR10582251,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,26M,1 +195,SRR10582252,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,25M,1 +196,SRR10582253,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,27M,1 +197,SRR10582254,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,25M,1 +198,SRR10582255,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,21M,1 +199,SRR10582256,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,25M,1 +200,SRR10582257,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,24M,1 +201,SRR10582258,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,24M,1 +202,SRR10582259,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,26M,1 +203,SRR10582260,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,23M,1 +204,SRR10601203,Ikegami2020phosphorylated,H. sapiens,GRO-seq,BJ5ta (cell line),nan,1,34M,1 +205,SRR10601204,Ikegami2020phosphorylated,H. sapiens,GRO-seq,BJ5ta (cell line),nan,2,35M,1 +206,SRR10669528,Bi2020enhancer,H. sapiens,GRO-seq,T47D (cell line),nan,1,41M,2 +207,SRR10669529,Bi2020enhancer,H. sapiens,GRO-seq,T47D (cell line),doxycycline (2day),1,59M,3 +208,SRR10669530,Bi2020enhancer,H. sapiens,GRO-seq,T47D (cell line),nan,1,42M,2 +209,SRR10669531,Bi2020enhancer,H. sapiens,GRO-seq,T47D (cell line),doxycycline (2day),1,48M,2 +210,SRR10669536,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),DMSO (1hr),1,28M,1 +211,SRR10669537,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),DMSO (1hr),2,26M,1 +212,SRR10669538,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),DMSO (1hr),3,25M,1 +213,SRR10669539,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),romidepsin (1hr),1,26M,1 +214,SRR10669540,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),romidepsin (1hr),2,26M,1 +215,SRR10669541,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),romidepsin (1hr),3,29M,1 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acid (3day)",1,35M,4 +237,SRR10808263,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",1,37M,1 +238,SRR10808264,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",1,33M,1 +239,SRR10836717,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",2,46M,1 +240,SRR10836718,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",2,31M,1 +241,SRR10836719,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",3,42M,1 +242,SRR10836720,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",3,36M,1 +243,SRR10836721,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",1,32M,1 +244,SRR10836722,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",1,39M,1 +245,SRR10836723,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",2,42M,1 +246,SRR10836724,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",2,41M,1 +247,SRR10836725,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",3,26M,4 +248,SRR10836726,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",3,32M,3 +249,SRR10897090,Ma2020super,H. sapiens,GRO-seq,A549 (cell line),"PBS (1day) , PBS (2day)",1,31M,2 +250,SRR10897091,Ma2020super,H. sapiens,GRO-seq,A549 (cell line),"cisplatin (1day) , cisplatin (2day)",1,24M,2 +251,SRR10906603,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),nan,1,37M,4 +252,SRR10906604,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),lipopolysaccharide (4hr),1,43M,2 +253,SRR10906605,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),nan,2,29M,3 +254,SRR10906606,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),lipopolysaccharide (4hr),2,30M,4 +255,SRR10915520,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),nan,1,47M,3 +256,SRR10915521,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),nan,1,52M,3 +257,SRR10915522,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),nan,1,43M,3 +258,SRR10915523,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,33M,5 +259,SRR10915524,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,27M,4 +260,SRR10915525,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,34M,4 +261,SRR10915526,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,58M,5 +262,SRR10915527,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,29M,4 +263,SRR10915528,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,57M,4 +264,SRR10915533,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),lipopolysaccharide (4hr),1,41M,2 +265,SRR11024606,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),nan,1,140M,2 +266,SRR11024607,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (1hr),1,120M,2 +267,SRR11024608,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (4hr),1,136M,2 +268,SRR11024609,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (1day),1,49M,3 +269,SRR11024610,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),nan,1,92M,2 +270,SRR11024611,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (2hr),1,91M,2 +271,SRR11024612,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (1day),1,75M,1 +272,SRR11024613,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),nan,1,70M,1 +273,SRR11024614,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (2hr),1,71M,1 +274,SRR11024615,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (1day),1,74M,1 +275,SRR11024616,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),DMSO (1hr),1,49M,1 +276,SRR11024617,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"auxin (2hr) , DMSO (1hr)",1,47M,2 +277,SRR11024618,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"auxin (2hr) , flavopiridol (1hr)",1,45M,3 +278,SRR11024619,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"auxin (2hr) , flavopiridol (1hr)",1,50M,3 +279,SRR11024620,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),DMSO (1hr),1,148M,1 +280,SRR11024621,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),NVP2 (1hr),1,98M,3 +281,SRR11024622,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"NVP2 (1hr) , auxin (2hr)",1,137M,3 +282,SRR11024623,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),nan,1,143M,1 +283,SRR11024624,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),heat shock (1hr),1,64M,1 +284,SRR11024625,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"auxin (2hr) , heat shock (1hr)",1,101M,1 +285,SRR11024626,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),nan,2,71M,3 +286,SRR11024627,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),heat shock (1hr),2,15M,3 +287,SRR11024628,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"auxin (2hr) , heat shock (1hr)",2,46M,4 +288,SRR11024629,Aoi2020nelf,H. sapiens,PRO-cap,DLD1 Flp-In (cell line),nan,1,121M,3 +289,SRR11024631,Aoi2020nelf,H. sapiens,PRO-cap,DLD1 Flp-In (cell line),auxin (2hr),1,113M,2 +290,SRR11024632,Aoi2020nelf,H. sapiens,PRO-cap,DLD1 Flp-In (cell line),nan,2,115M,2 +291,SRR11024633,Aoi2020nelf,H. sapiens,PRO-cap,DLD1 Flp-In (cell line),auxin (2hr),2,120M,2 +292,SRR1105736,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),1,55M,4 +293,SRR1105737,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),2,137M,3 +294,SRR1105738,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (1hr),1,161M,4 +295,SRR1105739,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (1hr),2,148M,3 +296,SRR1105740,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),1,179M,3 +297,SRR1105741,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (1hr),1,160M,2 +298,SRR11059463,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),nan,1,45M,2 +299,SRR11059464,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),nan,2,45M,2 +300,SRR11059465,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (1day),1,29M,2 +301,SRR11059466,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (1day),2,36M,2 +302,SRR11059467,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (12hr),1,26M,1 +303,SRR11059468,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (12hr),2,21M,2 +304,SRR11059469,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (6hr),1,25M,2 +305,SRR11059470,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (6hr),2,19M,2 +306,SRR1121678,Erhard2015nascent,Z. mays,GRO-seq,seedling (tissue),nan,1,50M,2 +307,SRR1121679,Erhard2015nascent,Z. mays,GRO-seq,seedling (tissue),nan,1,50M,2 +308,SRR11273554,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"DMSO (1hr) , 4-thiouridine (5min)",1,62M,1 +309,SRR11273555,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"DMSO (1hr) , 4-thiouridine (5min)",2,74M,1 +310,SRR11273556,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , dTAGV-1 (1hr)",1,66M,1 +311,SRR11273557,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , dTAGV-1 (1hr)",2,71M,1 +312,SRR11273558,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , DMSO (2hr)",1,70M,1 +313,SRR11273559,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , DMSO (2hr)",2,78M,1 +314,SRR11273560,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , dTAGV-1 (2hr)",1,78M,1 +315,SRR11273561,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , dTAGV-1 (2hr)",2,74M,1 +316,SRR11314417,Park2020global,H. sapiens,GRO-seq,TRExBCBL1 (cell line),nan,1,45M,1 +317,SRR11314418,Park2020global,H. sapiens,GRO-seq,TRExBCBL1 (cell line),doxycycline (1day),1,56M,2 +318,SRR1145801,Wang2015epigenetic,H. sapiens,GRO-seq,ESC (cell line),nan,1,244M,2 +319,SRR1145808,Wang2015epigenetic,H. sapiens,GRO-seq,ESC (cell line),pancreatic differentiation protocol (2day),1,178M,2 +320,SRR1145815,Wang2015epigenetic,H. sapiens,GRO-seq,ESC (cell line),pancreatic differentiation protocol (5day),1,51M,3 +321,SRR1145822,Wang2015epigenetic,H. sapiens,GRO-seq,ESC (cell line),pancreatic differentiation protocol (7day),1,52M,2 +322,SRR1145829,Wang2015epigenetic,H. sapiens,GRO-seq,ESC (cell line),pancreatic differentiation protocol (10day),1,49M,2 +323,SRR11554696,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,1,19M,4 +324,SRR11554697,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,2,19M,4 +325,SRR11554698,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,3,26M,3 +326,SRR11554699,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),1,16M,4 +327,SRR11554700,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),2,14M,4 +328,SRR11554701,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),3,16M,0 +329,SRR11554702,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,1,13M,4 +330,SRR11554703,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,2,22M,3 +331,SRR11554704,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,3,29M,2 +332,SRR11554705,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),1,14M,4 +333,SRR11554706,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),2,19M,4 +334,SRR11554707,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),3,25M,3 +335,SRR11554708,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,1,20M,3 +336,SRR11554709,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,2,26M,3 +337,SRR11554710,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,3,32M,2 +338,SRR11554711,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,4,10M,4 +339,SRR11554712,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,5,34M,2 +340,SRR11554713,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,6,12M,4 +341,SRR11554714,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),1,16M,4 +342,SRR11554715,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),2,16M,4 +343,SRR11554716,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),3,23M,3 +344,SRR11554717,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),4,9M,5 +345,SRR11554718,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),5,28M,3 +346,SRR11554719,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),6,21M,4 +347,SRR11554720,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,1,30M,5 +348,SRR11554721,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,2,34M,5 +349,SRR11554722,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,1,36M,5 +350,SRR11554723,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),nan,2,36M,5 +351,SRR11607564,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Bap170 (5day),2,23M,3 +352,SRR11607567,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Nurf301 (5day),2,32M,3 +353,SRR11607570,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Bap170 (5day) , dsRNA Nurf301 (5day)",2,35M,3 +354,SRR11607573,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),2,34M,3 +355,SRR11607576,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Gaf (5day),2,27M,3 +356,SRR1168364,Zhang2019arerg,H. sapiens,GRO-seq,VCaP (cell line),nan,1,33M,3 +357,SRR1168365,Zhang2019arerg,H. sapiens,GRO-seq,VCaP (cell line),dihydrotestosterone (2hr),1,30M,1 +358,SRR11785044,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),nan,1,54M,1 +359,SRR11785045,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),nan,2,44M,1 +360,SRR11785046,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),nan,1,34M,1 +361,SRR11785047,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),nan,2,44M,1 +362,SRR11785048,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),nan,1,51M,1 +363,SRR11785049,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),nan,2,50M,1 +364,SRR11785050,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),nan,1,51M,1 +365,SRR11785051,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),nan,2,48M,1 +366,SRR11789179,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),nan,2,26M,2 +367,SRR11793825,Judd2020unpublished,H. sapiens,PRO-seq,K562 (cell line),nan,1,11M,4 +368,SRR11793826,Judd2020unpublished,H. sapiens,PRO-seq,K562 (cell line),nan,2,13M,4 +369,SRR11793827,Judd2020unpublished,H. sapiens,other,K562 (cell line),nan,1,35M,1 +370,SRR11793828,Judd2020unpublished,H. sapiens,other,K562 (cell line),nan,2,33M,1 +371,SRR11793829,Judd2020unpublished,H. sapiens,other,K562 (cell line),nan,1,48M,4 +372,SRR11793830,Judd2020unpublished,H. sapiens,other,K562 (cell line),nan,2,31M,3 +373,SRR11802024,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen (tissue),nan,1,51M,1 +374,SRR11802025,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,50M,3 +375,SRR11802026,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,51M,2 +376,SRR11802027,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,61M,2 +377,SRR11802028,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,29M,4 +378,SRR11802029,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen (tissue),nan,1,14M,4 +379,SRR11802030,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen (tissue),nan,1,21M,4 +380,SRR11802031,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,12M,5 +381,SRR11802032,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,19M,4 +382,SRR11802033,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,19M,4 +383,SRR11802034,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,13M,5 +384,SRR11802035,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,17M,5 +385,SRR11802036,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,19M,4 +386,SRR11802037,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,23M,3 +387,SRR11802038,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,12M,5 +388,SRR11802039,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,18M,4 +389,SRR11802040,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,9M,4 +390,SRR11802041,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,19M,3 +391,SRR11802042,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,26M,4 +392,SRR11802043,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen (tissue),nan,1,48M,1 +393,SRR11802044,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),nan,1,44M,1 +394,SRR11811942,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA beta-galactosidase (60hr),1,8M,4 +395,SRR11811943,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA beta-galactosidase (60hr),2,9M,4 +396,SRR11811944,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA IntS8 (60hr),1,13M,3 +397,SRR11811945,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA IntS8 (60hr),2,13M,3 +398,SRR11811946,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),"copper sulfate (1day) , dsRNA IntS8 (60hr)",1,14M,3 +399,SRR11811947,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),"copper sulfate (1day) , dsRNA IntS8 (60hr)",2,14M,3 +400,SRR11811948,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),"copper sulfate (1day) , dsRNA IntS8 (60hr)",1,11M,4 +401,SRR11811949,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),"copper sulfate (1day) , dsRNA IntS8 (60hr)",2,13M,3 +402,SRR11849645,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),methanol (2hr),1,18M,2 +403,SRR11849646,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),methanol (12hr),1,17M,3 +404,SRR11849647,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),nitro-octadec-9-enoic acid (2hr),1,21M,1 +405,SRR11849648,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),nitro-octadec-9-enoic acid (12hr),1,18M,2 +406,SRR1187957,Mohn2014rhino,D. melanogaster,GRO-seq,ovary (tissue),nan,1,73M,4 +407,SRR1187958,Mohn2014rhino,D. melanogaster,GRO-seq,ovary (tissue),nan,1,113M,5 +408,SRR1192053,Jin2014chem,H. sapiens,GRO-seq,LNCaP (cell line),"dihydrotestosterone (1hr) , DMSO (2hr)",1,53M,2 +409,SRR1192054,Jin2014chem,H. sapiens,GRO-seq,LNCaP (cell line),"DMSO (2hr) , ethanol (1hr)",1,44M,2 +410,SRR1192055,Jin2014chem,H. sapiens,GRO-seq,LNCaP (cell line),"SD70 (2hr) , dihydrotestosterone (1hr)",1,45M,2 +411,SRR1192056,Jin2014chem,H. sapiens,GRO-seq,LNCaP (cell line),"SD70 (2hr) , ethanol (1hr)",1,38M,2 +412,SRR11936615,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",1,25M,1 +413,SRR11936616,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",2,29M,1 +414,SRR11936617,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",3,32M,1 +415,SRR11936618,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",4,31M,1 +416,SRR11936619,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",1,30M,1 +417,SRR11936620,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",2,29M,1 +418,SRR11936621,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",3,25M,1 +419,SRR11936622,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",4,23M,1 +420,SRR11936623,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"DMSO (3day) , STI-571 (4day)",1,17M,2 +421,SRR11936624,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"DMSO (3day) , STI-571 (4day)",2,19M,2 +422,SRR11936625,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"DMSO (3day) , STI-571 (4day)",3,23M,1 +423,SRR11936626,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"doxycycline (3day) , indoleacetic acid (3day) , STI-571 (4day)",1,25M,1 +424,SRR11936627,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"doxycycline (3day) , indoleacetic acid (3day) , STI-571 (4day)",2,25M,1 +425,SRR11936628,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"doxycycline (3day) , indoleacetic acid (3day) , STI-571 (4day)",3,34M,1 +426,SRR12083664,Blumberg2021characterizing,H. sapiens,PRO-seq,K562 (cell line),nan,1,41M,1 +427,SRR12083665,Blumberg2021characterizing,H. sapiens,PRO-seq,K562 (cell line),nan,2,47M,1 +428,SRR12091767,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),nan,1,38M,1 +429,SRR12091768,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),nan,2,34M,1 +430,SRR12091769,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),nan,1,56M,1 +431,SRR12091770,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),nan,2,29M,1 +432,SRR12091771,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (30min),1,50M,1 +433,SRR12091772,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (30min),2,35M,1 +434,SRR12091773,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (1hr),1,38M,1 +435,SRR12091774,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (1hr),2,34M,1 +436,SRR12091775,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (2hr),1,33M,1 +437,SRR12091776,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (2hr),2,33M,1 +438,SRR12091777,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (6hr),1,58M,2 +439,SRR12091778,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (6hr),2,35M,1 +440,SRR12091779,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (1day),1,73M,3 +441,SRR12091780,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (1day),2,73M,2 +442,SRR12091781,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),GSK2879552 (1day),1,77M,2 +443,SRR12091782,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),GSK2879552 (1day),2,62M,2 +444,SRR12091783,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),"GSK2879552 (1day) , dTAG47 (1day)",1,71M,3 +445,SRR12091784,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),"GSK2879552 (1day) , dTAG47 (1day)",2,70M,4 +446,SRR1219737,Sigova2013divergent,H. sapiens,GRO-seq,ESC (cell line),"RPMI/B27 (3day) , activin (2day)",1,71M,1 +447,SRR122339,Wang2011reprogramming,H. sapiens,GRO-seq,LNCaP (cell line),nan,1,22M,3 +448,SRR122340,Wang2011reprogramming,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),2,23M,2 +449,SRR122341,Wang2011reprogramming,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),3,21M,3 +450,SRR1224573,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (30min),1,191M,2 +451,SRR1224574,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (30min),1,165M,4 +452,SRR1233867,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),nan,1,155M,2 +453,SRR1233868,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (10min),1,150M,2 +454,SRR1233869,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (30min),1,156M,2 +455,SRR1233870,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (1hr),1,168M,2 +456,SRR1233871,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (3hr),1,153M,2 +457,SRR1233872,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),nan,2,197M,3 +458,SRR1233873,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (10min),2,152M,5 +459,SRR1233874,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (30min),2,162M,3 +460,SRR1233875,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (1hr),2,166M,3 +461,SRR1233876,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (3hr),2,142M,3 +462,SRR12482690,Gally2020gain,H. sapiens,PRO-seq,A549 (cell line),nan,1,124M,2 +463,SRR12482691,Gally2020gain,H. sapiens,PRO-seq,A549 (cell line),nan,2,125M,2 +464,SRR12482692,Gally2020gain,H. sapiens,PRO-seq,BEAS-2B (cell line),nan,1,75M,3 +465,SRR12482693,Gally2020gain,H. sapiens,PRO-seq,BEAS-2B (cell line),nan,2,131M,2 +466,SRR12482694,Gally2020gain,H. sapiens,PRO-seq,LC-2/ad (cell line),nan,1,138M,2 +467,SRR12482695,Gally2020gain,H. sapiens,PRO-seq,LC-2/ad (cell line),nan,2,118M,2 +468,SRR12634522,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),flavopiridol (2hr),1,24M,4 +469,SRR12634523,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),"flavopiridol (2hr) , lipopolysaccharide (5min)",1,9M,4 +470,SRR12634524,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),"flavopiridol (2hr) , lipopolysaccharide (15min)",1,15M,4 +471,SRR12634525,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),"flavopiridol (2hr) , lipopolysaccharide (30min)",1,24M,4 +472,SRR12634526,Barbieri2020rapid,H. sapiens,other,iPSC (cell line),nan,1,30M,4 +473,SRR12634527,Barbieri2020rapid,H. sapiens,other,iPSC (cell line),nan,1,35M,5 +474,SRR12634528,Barbieri2020rapid,H. sapiens,other,iPSC (cell line),nan,2,17M,5 +475,SRR12634529,Barbieri2020rapid,H. sapiens,other,iPSC (cell line),nan,1,30M,4 +476,SRR12634530,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),nan,1,11M,3 +477,SRR12650990,Barbieri2020rapid,H. sapiens,other,iPSC (cell line),nan,2,0M,5 +478,SRR12699328,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (10min),1,30M,1 +479,SRR12699329,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (10min),2,47M,1 +480,SRR12699330,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (1hr),1,43M,1 +481,SRR12699331,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (1hr),2,23M,1 +482,SRR12699332,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (30min),1,39M,1 +483,SRR12699333,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (30min),2,36M,1 +484,SRR12699334,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (1hr),1,68M,1 +485,SRR12699335,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (1hr),2,33M,1 +486,SRR12699336,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (3hr),1,36M,1 +487,SRR12699337,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (3hr),2,42M,1 +488,SRR12699338,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),dTAG47 (3hr),1,121M,1 +489,SRR12699339,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),dTAG47 (3hr),2,50M,1 +490,SRR12699340,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (3hr),1,57M,1 +491,SRR12699341,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (3hr),2,40M,1 +492,SRR12699342,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),dTAG47 (3hr),1,40M,3 +493,SRR12699343,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),dTAG47 (3hr),2,35M,1 +494,SRR1275489,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),DMSO (2day),1,11M,4 +495,SRR1275490,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),DMSO (2day),2,12M,4 +496,SRR1275491,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),leflunomide (2day),1,16M,4 +497,SRR1275492,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),leflunomide (2day),2,17M,4 +498,SRR1275493,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),A771726 (2day),1,26M,5 +499,SRR1275494,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),A771726 (2day),2,21M,5 +500,SRR12774937,Shamie2020unpublished,C. griseus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,8M,4 +501,SRR12774938,Shamie2020unpublished,C. griseus,GRO-seq,bone marrow derived macrophage (primary),nan,1,8M,4 +502,SRR12774939,Shamie2020unpublished,C. griseus,GRO-seq,brain (tissue),nan,1,9M,4 +503,SRR12774940,Shamie2020unpublished,C. griseus,GRO-seq,CHO-K1 (cell line),nan,1,33M,2 +504,SRR12774941,Shamie2020unpublished,C. griseus,GRO-seq,CHO-K1 (cell line),nan,2,30M,2 +505,SRR12774942,Shamie2020unpublished,C. griseus,GRO-seq,kidney (tissue),nan,1,11M,3 +506,SRR12774943,Shamie2020unpublished,C. griseus,GRO-seq,liver (tissue),nan,1,8M,4 +507,SRR12774944,Shamie2020unpublished,C. griseus,GRO-seq,lung (tissue),nan,1,10M,4 +508,SRR12774945,Shamie2020unpublished,C. griseus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,14M,4 +509,SRR12774946,Shamie2020unpublished,C. griseus,GRO-cap,bone marrow derived macrophage (primary),nan,1,12M,4 +510,SRR12774947,Shamie2020unpublished,C. griseus,GRO-cap,brain (tissue),nan,1,31M,5 +511,SRR12774948,Shamie2020unpublished,C. griseus,GRO-cap,CHO-K1 (cell line),nan,1,29M,3 +512,SRR12774949,Shamie2020unpublished,C. griseus,GRO-cap,CHO-K1 (cell line),nan,2,23M,3 +513,SRR12774950,Shamie2020unpublished,C. griseus,GRO-cap,kidney (tissue),nan,1,23M,4 +514,SRR12774951,Shamie2020unpublished,C. griseus,GRO-cap,liver (tissue),nan,1,3M,5 +515,SRR12774952,Shamie2020unpublished,C. griseus,GRO-cap,lung (tissue),nan,1,19M,4 +516,SRR1297231,Wei2016rbfox2,M. musculus,GRO-seq,cardiomyocyte (primary),nan,1,36M,2 +517,SRR1297232,Wei2016rbfox2,M. musculus,GRO-seq,cardiomyocyte (primary),nan,1,37M,2 +518,SRR1297233,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),nan,1,15M,3 +519,SRR1297234,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),nan,2,14M,3 +520,SRR1297235,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),nan,1,10M,4 +521,SRR1297236,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),nan,2,11M,3 +522,SRR1297237,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),nan,1,12M,3 +523,SRR1297238,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),nan,2,13M,3 +524,SRR1302423,Skowronskakrawczyk2014required,R. norvegicus,GRO-seq,GC pituitary cell (cell line),nan,1,36M,2 +525,SRR1302424,Skowronskakrawczyk2014required,R. norvegicus,GRO-seq,GC pituitary cell (cell line),nan,1,40M,2 +526,SRR13114370,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),nan,1,37M,4 +527,SRR13114371,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),nan,1,25M,4 +528,SRR13114372,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),nan,2,29M,4 +529,SRR13114373,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),nan,2,24M,4 +530,SRR13114374,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),nan,3,29M,4 +531,SRR13114375,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),nan,3,20M,4 +532,SRR13114376,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",1,32M,1 +533,SRR13114377,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",2,36M,1 +534,SRR13114378,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",3,35M,1 +535,SRR13114379,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",1,24M,1 +536,SRR13114380,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",2,27M,1 +537,SRR13114381,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",3,27M,1 +538,SRR13114382,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",1,36M,1 +539,SRR13114383,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",2,38M,1 +540,SRR13114384,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",3,35M,1 +541,SRR13114385,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",1,29M,1 +542,SRR13114386,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",2,55M,1 +543,SRR13114387,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",3,26M,1 +544,SRR13208368,Harman2021invivo,M. musculus,GRO-seq,pro B cell (primary),nan,1,30M,1 +545,SRR13208369,Harman2021invivo,M. musculus,GRO-seq,pro B cell (primary),nan,1,30M,2 +546,SRR13242137,Chivu2020unpublished,H. sapiens,ChRO-seq,K562 (cell line),nan,1,18M,0 +547,SRR13242138,Chivu2020unpublished,H. sapiens,ChRO-seq,K562 (cell line),triptolide (1hr),1,20M,0 +548,SRR13242139,Chivu2020unpublished,H. sapiens,ChRO-seq,K562 (cell line),triptolide (4hr),1,12M,0 +549,SRR13242380,Chivu2020unpublished,E. caballus,ChRO-seq,liver (tissue),nan,1,25M,5 +550,SRR13242381,Chivu2020unpublished,E. caballus,ChRO-seq,liver (tissue),nan,2,28M,3 +551,SRR1342250,Gardini2014integrator,H. sapiens,GRO-seq,HeLa (cell line),"EGF (30min) , serum starvation (1day)",1,58M,3 +552,SRR1342251,Gardini2014integrator,H. sapiens,GRO-seq,HeLa (cell line),"EGF (30min) , doxycycline (4day) , serum starvation (1day)",1,45M,1 +553,SRR1342252,Gardini2014integrator,H. sapiens,GRO-seq,HeLa (cell line),"EGF (30min) , serum starvation (1day)",2,114M,4 +554,SRR1342253,Gardini2014integrator,H. sapiens,GRO-seq,HeLa (cell line),"EGF (30min) , doxycycline (4day) , serum starvation (1day)",2,71M,3 +555,SRR13632937,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,19M,2 +556,SRR13632938,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,20M,1 +557,SRR13632939,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,19M,2 +558,SRR13632940,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,18M,2 +559,SRR1406747,Kaikkonen2014control,H. sapiens,GRO-seq,HUVEC (primary),nan,2,14M,3 +560,SRR1406748,Kaikkonen2014control,H. sapiens,GRO-seq,HUVEC (primary),VEGF-A165 (2hr),2,16M,2 +561,SRR1501091,Leveille2015genome,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,144M,3 +562,SRR1501092,Leveille2015genome,H. sapiens,GRO-seq,MCF7 (cell line),nan,2,118M,3 +563,SRR1501093,Leveille2015genome,H. sapiens,GRO-seq,MCF7 (cell line),nutlin-3 (12hr),1,129M,3 +564,SRR1501094,Leveille2015genome,H. sapiens,GRO-seq,MCF7 (cell line),nutlin-3 (12hr),2,112M,3 +565,SRR1503602,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),nan,1,5M,5 +566,SRR1503603,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),nan,2,4M,5 +567,SRR1503604,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),dsRNA LacZ (5day),1,8M,4 +568,SRR1503605,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),dsRNA LacZ (5day),2,2M,5 +569,SRR1503606,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Gaf (5day),1,8M,4 +570,SRR1503607,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Gaf (5day),2,7M,5 +571,SRR1517780,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (1hr),1,49M,1 +572,SRR1517781,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (4hr),1,57M,1 +573,SRR1517782,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (7hr),1,97M,2 +574,SRR1517783,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (10hr),1,154M,2 +575,SRR1517784,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (12hr),1,104M,1 +576,SRR1517785,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (12hr),1,80M,2 +577,SRR1517786,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (12hr),1,77M,2 +578,SRR1517787,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (12hr),1,103M,1 +579,SRR1517788,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (10hr),2,79M,2 +580,SRR1517789,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (12hr),2,86M,2 +581,SRR1517790,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (10hr),3,60M,1 +582,SRR1517791,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (10hr),1,69M,1 +583,SRR1519032,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),1,27M,1 +584,SRR1519033,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),2,21M,1 +585,SRR1519034,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),3,27M,1 +586,SRR1519035,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,19M,2 +587,SRR1519036,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,29M,1 +588,SRR1519037,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),3,20M,2 +589,SRR1519038,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),TNF-alpha (40min),1,20M,1 +590,SRR1519039,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),TNF-alpha (40min),2,24M,1 +591,SRR1519040,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),TNF-alpha (40min),3,23M,1 +592,SRR1519041,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (40min) , TNF-alpha (40min)",1,22M,1 +593,SRR1519042,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (40min) , TNF-alpha (40min)",2,22M,1 +594,SRR1519043,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (40min) , TNF-alpha (40min)",3,24M,1 +595,SRR1542320,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,23M,4 +596,SRR1542321,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,48M,4 +597,SRR1542322,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,42M,4 +598,SRR1542323,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,41M,5 +599,SRR1542324,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (1hr),1,50M,2 +600,SRR1542325,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),retinoic acid (1hr),1,44M,2 +601,SRR1542326,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,37M,3 +602,SRR1542327,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (1hr),1,49M,2 +603,SRR1542328,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),retinoic acid (1hr),1,23M,2 +604,SRR1542329,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,42M,2 +605,SRR1542330,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),2,47M,2 +606,SRR1542331,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),2,46M,2 +607,SRR1542332,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,44M,2 +608,SRR1542333,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,46M,2 +609,SRR1544602,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,103M,3 +610,SRR1544603,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,2,89M,2 +611,SRR1544604,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,103M,2 +612,SRR1544605,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,90M,2 +613,SRR1544606,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,90M,2 +614,SRR1544608,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,74M,1 +615,SRR1544609,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,70M,1 +616,SRR1544610,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,78M,1 +617,SRR1544611,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,91M,2 +618,SRR1544612,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),nan,1,27M,1 +619,SRR1544613,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),nan,1,33M,1 +620,SRR1544614,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),nan,1,33M,1 +621,SRR1544615,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),nan,1,34M,1 +622,SRR1552315,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,2,107M,2 +623,SRR1552316,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,2,66M,2 +624,SRR1552480,Core2014analysis,H. sapiens,GRO-cap,K562 (cell line),nan,1,37M,4 +625,SRR1552481,Core2014analysis,H. sapiens,GRO-cap,K562 (cell line),nan,1,19M,4 +626,SRR1552482,Core2014analysis,H. sapiens,GRO-cap,GM12878 (cell line),nan,1,36M,4 +627,SRR1552483,Core2014analysis,H. sapiens,GRO-cap,GM12878 (cell line),nan,1,11M,4 +628,SRR1552484,Core2014analysis,H. sapiens,GRO-seq,K562 (cell line),nan,1,23M,1 +629,SRR1552485,Core2014analysis,H. sapiens,GRO-seq,GM12878 (cell line),nan,1,165M,2 +630,SRR1560531,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,1,81M,1 +631,SRR1560532,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,2,16M,3 +632,SRR1560533,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (20min),1,77M,1 +633,SRR1560534,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (20min),2,15M,3 +634,SRR1560535,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (1hr),1,70M,1 +635,SRR1560536,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (1hr),2,20M,2 +636,SRR1560537,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (3hr),1,63M,1 +637,SRR1560538,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (3hr),2,15M,3 +638,SRR1574538,Chen2014gene,H. sapiens,GRO-seq,ESC (cell line),nan,1,16M,3 +639,SRR1574539,Chen2014gene,H. sapiens,GRO-seq,ESC (cell line),nan,1,19M,3 +640,SRR1596500,Andersson2014nuclear,H. sapiens,GRO-seq,HeLa (cell line),nan,1,21M,1 +641,SRR1596501,Andersson2014nuclear,H. sapiens,GRO-seq,HeLa (cell line),nan,2,33M,1 +642,SRR1609863,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,43M,2 +643,SRR1609864,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,48M,3 +644,SRR1609865,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,49M,2 +645,SRR1609866,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,42M,2 +646,SRR1609867,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,24M,2 +647,SRR1609868,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,41M,3 +648,SRR1609869,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,33M,3 +649,SRR1609870,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,39M,2 +650,SRR1611829,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),nan,1,82M,4 +651,SRR1611830,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),nan,2,150M,4 +652,SRR1611831,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),nan,3,162M,4 +653,SRR1611832,Meng2014convergent,M. musculus,GRO-seq,splenic germinal center B cell (primary),nan,1,169M,4 +654,SRR1611833,Meng2014convergent,M. musculus,GRO-seq,splenic germinal center B cell (primary),nan,2,198M,4 +655,SRR1611834,Meng2014convergent,M. musculus,GRO-seq,splenic germinal center B cell (primary),nan,3,195M,4 +656,SRR1611835,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (60hr) , interleukin-4 (60hr)",1,179M,3 +657,SRR1611836,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (60hr) , interleukin-4 (60hr)",2,202M,4 +658,SRR1611837,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (60hr) , interleukin-4 (60hr)",3,163M,3 +659,SRR1611838,Meng2014convergent,M. musculus,GRO-seq,MEF (cell line),nan,1,137M,3 +660,SRR1611839,Meng2014convergent,M. musculus,GRO-seq,MEF (cell line),nan,2,127M,3 +661,SRR1611840,Meng2014convergent,H. sapiens,GRO-seq,Ramos (cell line),nan,1,106M,2 +662,SRR1648886,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),1,27M,3 +663,SRR1648887,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,31M,2 +664,SRR1648888,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),1,28M,2 +665,SRR1648889,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,27M,2 +666,SRR1648890,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),2,25M,3 +667,SRR1648891,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),2,26M,3 +668,SRR1648892,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),1,22M,2 +669,SRR1648893,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,28M,2 +670,SRR1648894,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),1,24M,2 +671,SRR1648895,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,23M,2 +672,SRR1648900,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),2,37M,2 +673,SRR1648901,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),2,26M,3 +674,SRR1648904,Puc2015ligand,H. sapiens,PRO-cap,LNCaP (cell line),ethanol (1hr),1,9M,5 +675,SRR1648905,Puc2015ligand,H. sapiens,PRO-cap,LNCaP (cell line),dihydrotestosterone (1hr),1,19M,4 +676,SRR1648909,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),4,45M,3 +677,SRR1648910,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),4,47M,3 +678,SRR1648911,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),2,41M,3 +679,SRR1648912,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),2,37M,2 +680,SRR1652068,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (14hr),1,23M,4 +681,SRR1652069,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (1hr) , tetrodotoxin (14hr)",1,25M,4 +682,SRR1652070,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (3hr) , tetrodotoxin (14hr)",1,25M,3 +683,SRR1652071,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (14hr),1,27M,3 +684,SRR1652072,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (1hr) , tetrodotoxin (14hr)",1,35M,3 +685,SRR1652073,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (3hr) , tetrodotoxin (14hr)",1,32M,3 +686,SRR1652074,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (14hr),1,38M,3 +687,SRR1652075,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (1hr) , tetrodotoxin (14hr)",1,37M,2 +688,SRR1652076,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (14hr),1,33M,2 +689,SRR1652077,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (1hr) , tetrodotoxin (14hr)",1,33M,2 +690,SRR1661564,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"alpha-amanitin (42hr) , doxycycline (14hr)",1,6M,5 +691,SRR1661565,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,13M,4 +692,SRR1661566,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,8M,4 +693,SRR1661567,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,7M,4 +694,SRR1661568,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"alpha-amanitin (42hr) , doxycycline (14hr)",1,9M,5 +695,SRR1661569,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,7M,5 +696,SRR1661570,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,9M,5 +697,SRR1661571,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,5M,5 +698,SRR1661572,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"alpha-amanitin (42hr) , doxycycline (14hr)",1,4M,5 +699,SRR1661573,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,4M,5 +700,SRR1661574,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,6M,5 +701,SRR1661575,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,4M,5 +702,SRR1661576,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"alpha-amanitin (42hr) , doxycycline (14hr)",1,8M,4 +703,SRR1661577,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,8M,4 +704,SRR1661578,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,6M,5 +705,SRR1661579,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,7M,5 +706,SRR1732573,Soccio2015genetic,M. musculus,GRO-seq,epididymal white adipose tissue (tissue),low fat diet (28day),1,67M,3 +707,SRR1734841,Zhang2015enhancer,M. musculus,GRO-seq,AtT20 (cell line),nan,1,32M,3 +708,SRR1734842,Zhang2015enhancer,M. musculus,GRO-seq,AtT20 (cell line),nan,1,33M,2 +709,SRR1734843,Zhang2015enhancer,M. musculus,GRO-seq,AtT20 (cell line),nan,1,51M,1 +710,SRR1734844,Zhang2015enhancer,M. musculus,GRO-seq,AtT20 (cell line),nan,1,32M,2 +711,SRR1736053,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),nan,1,39M,1 +712,SRR1736054,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),nan,2,36M,1 +713,SRR1736055,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),nan,1,30M,1 +714,SRR1736056,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),nan,1,27M,1 +715,SRR1736059,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),DMSO (4hr),1,52M,2 +716,SRR1736060,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),pladienolides B (4hr),1,35M,2 +717,SRR1736061,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,45M,2 +718,SRR1736062,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,35M,2 +719,SRR1736063,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,46M,1 +720,SRR1736064,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,42M,2 +721,SRR1736065,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),nan,1,52M,2 +722,SRR1772449,Illingworth2016polycomb,M. musculus,GRO-seq,ESC (cell line),cell sorting HV-,1,39M,3 +723,SRR1772450,Illingworth2016polycomb,M. musculus,GRO-seq,ESC (cell line),cell sorting HV-,2,37M,4 +724,SRR1772451,Illingworth2016polycomb,M. musculus,GRO-seq,ESC (cell line),cell sorting HV+,1,49M,3 +725,SRR1772452,Illingworth2016polycomb,M. musculus,GRO-seq,ESC (cell line),cell sorting HV+,2,37M,4 +726,SRR1806546,Andrade2015dna,H. sapiens,other,HF1 (cell line),bromouridine (30min),1,26M,1 +727,SRR1806547,Andrade2015dna,H. sapiens,other,HF1 (cell line),bromouridine (30min),2,26M,1 +728,SRR1806548,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",1,23M,2 +729,SRR1806549,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",2,22M,2 +730,SRR1806550,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",1,27M,3 +731,SRR1806551,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",2,27M,3 +732,SRR1806552,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",1,27M,3 +733,SRR1806553,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",2,26M,3 +734,SRR1806554,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",1,29M,2 +735,SRR1806555,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",2,29M,2 +736,SRR1806556,Andrade2015dna,H. sapiens,other,HF1 (cell line),bromouridine (30min),1,39M,1 +737,SRR1806557,Andrade2015dna,H. sapiens,other,HF1 (cell line),bromouridine (30min),2,39M,1 +738,SRR1806558,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",1,28M,3 +739,SRR1806559,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",2,28M,3 +740,SRR1806560,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",1,31M,2 +741,SRR1806561,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",2,31M,2 +742,SRR1806562,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",1,34M,4 +743,SRR1806563,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",2,34M,4 +744,SRR1806564,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",1,27M,1 +745,SRR1806565,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",2,27M,1 +746,SRR1806566,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),bromouridine (30min),1,34M,1 +747,SRR1806567,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),bromouridine (30min),2,34M,1 +748,SRR1806568,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,35M,4 +749,SRR1806569,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,35M,4 +750,SRR1806570,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,34M,4 +751,SRR1806571,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,34M,4 +752,SRR1806572,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,50M,3 +753,SRR1806573,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,50M,3 +754,SRR1806574,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,35M,2 +755,SRR1806575,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,35M,2 +756,SRR1806576,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),bromouridine (30min),1,34M,1 +757,SRR1806577,Andrade2015dna,H. sapiens,other,skin fibroblast 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(cell line),DMSO (5hr),3,14M,5 +898,SRR2634651,Orioli2016human,H. sapiens,other,IMR90 (cell line),"ethynyl uridine (5hr) , serum starvation (5hr)",1,22M,4 +899,SRR2634652,Orioli2016human,H. sapiens,other,IMR90 (cell line),"ethynyl uridine (5hr) , serum starvation (5hr)",2,19M,4 +900,SRR2634653,Orioli2016human,H. sapiens,other,IMR90 (cell line),"ethynyl uridine (5hr) , serum starvation (5hr)",3,16M,4 +901,SRR2634654,Orioli2016human,H. sapiens,other,IMR90 (cell line),"serum starvation (5hr) , DMSO (5hr)",1,17M,5 +902,SRR2634655,Orioli2016human,H. sapiens,other,IMR90 (cell line),"serum starvation (5hr) , DMSO (5hr)",2,17M,5 +903,SRR2634656,Orioli2016human,H. sapiens,other,IMR90 (cell line),"serum starvation (5hr) , DMSO (5hr)",3,16M,5 +904,SRR2724029,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),1,16M,2 +905,SRR2724030,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),2,20M,1 +906,SRR2724031,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),1,24M,2 +907,SRR2724032,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),2,23M,2 +908,SRR3004197,Sumida2018ultra,H. sapiens,other,HCEC (cell line),ethynyl uridine (1hr),1,5M,5 +909,SRR3004198,Sumida2018ultra,H. sapiens,other,HCEC (cell line),ethynyl uridine (1hr),2,5M,5 +910,SRR3004199,Sumida2018ultra,H. sapiens,other,HCT116 (cell line),ethynyl uridine (1hr),1,4M,5 +911,SRR3004200,Sumida2018ultra,H. sapiens,other,HCT116 (cell line),ethynyl uridine (1hr),2,5M,4 +912,SRR3051599,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),nan,1,15M,3 +913,SRR3051600,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),hydroxytamoxifen (60hr),1,28M,1 +914,SRR3051601,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),nan,2,27M,1 +915,SRR3051602,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),adeno-Cre virus (4hr),1,27M,1 +916,SRR3051603,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),nan,3,4M,5 +917,SRR3051604,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),adeno-Cre virus (4hr),2,3M,5 +918,SRR3051605,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),nan,4,4M,5 +919,SRR3051606,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),adeno-Cre virus (4hr),3,1M,5 +920,SRR3090582,Wu2017indentifying,M. musculus,GRO-seq,C2C12 (cell line),nan,1,147M,5 +921,SRR3090583,Wu2017indentifying,M. musculus,GRO-seq,C2C12 (cell line),nan,2,162M,4 +922,SRR3146638,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (2min),1,21M,3 +923,SRR3146639,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (2min),2,37M,3 +924,SRR3146640,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (5min),1,20M,3 +925,SRR3146641,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (5min),2,38M,3 +926,SRR3146642,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (10min),1,24M,3 +927,SRR3146643,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (10min),2,24M,3 +928,SRR3146644,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (20min),1,33M,3 +929,SRR3146645,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (20min),2,23M,3 +930,SRR3160418,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"interleukin-4 (2day) , DMSO (2day) , anti-CD40 (2day)",1,56M,2 +931,SRR3160419,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"interleukin-4 (2day) , DMSO (2day) , anti-CD40 (2day)",2,59M,1 +932,SRR3160420,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"idelalisib (2day) , interleukin-4 (2day) , anti-CD40 (2day)",1,71M,2 +933,SRR3160421,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"idelalisib (2day) , interleukin-4 (2day) , anti-CD40 (2day)",2,41M,1 +934,SRR3160422,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"duvelisib (2day) , interleukin-4 (2day) , anti-CD40 (2day)",1,36M,2 +935,SRR3160423,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"duvelisib (2day) , interleukin-4 (2day) , anti-CD40 (2day)",2,39M,1 +936,SRR3189196,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),1,18M,3 +937,SRR3189197,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),2,36M,3 +938,SRR3189198,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA LacZ (5day) , heat shock (20min)",1,31M,3 +939,SRR3189199,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA LacZ (5day) , heat shock (20min)",2,35M,3 +940,SRR3189200,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Gaf (5day),1,24M,3 +941,SRR3189201,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Gaf (5day),2,22M,3 +942,SRR3189202,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Gaf (5day) , heat shock (20min)",1,26M,3 +943,SRR3189203,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Gaf (5day) , heat shock (20min)",2,18M,3 +944,SRR3189204,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Hsf (5day),1,24M,3 +945,SRR3189205,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Hsf (5day),2,16M,2 +946,SRR3189206,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Hsf (5day) , heat shock (20min)",1,17M,3 +947,SRR3189207,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Hsf (5day) , heat shock (20min)",2,27M,3 +948,SRR3189208,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),nan,1,24M,3 +949,SRR3189209,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),nan,2,30M,3 +950,SRR3189210,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (30s),1,25M,3 +951,SRR3189211,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (30s),2,30M,3 +952,SRR3194602,Oittinen2017polycomb,M. musculus,GRO-seq,intestinal organoid (primary),nan,1,44M,2 +953,SRR3194603,Oittinen2017polycomb,M. musculus,GRO-seq,intestinal organoid (primary),enterocyte differentiation protocol,1,45M,1 +954,SRR3194604,Oittinen2017polycomb,M. musculus,GRO-seq,intestinal organoid (primary),nan,2,21M,2 +955,SRR3194605,Oittinen2017polycomb,M. musculus,GRO-seq,intestinal organoid (primary),enterocyte differentiation protocol,2,13M,3 +956,SRR3309664,Hong2017dissociation,M. musculus,GRO-seq,quadriceps muscle (tissue),nan,1,132M,1 +957,SRR3309665,Hong2017dissociation,M. musculus,GRO-seq,quadriceps muscle (tissue),nan,1,140M,2 +958,SRR3313817,Sun2017enhancer,M. musculus,GRO-seq,quadriceps muscle (tissue),nan,1,132M,1 +959,SRR3313818,Sun2017enhancer,M. musculus,GRO-seq,quadriceps muscle (tissue),nan,1,140M,2 +960,SRR3313819,Sun2017enhancer,M. musculus,GRO-seq,quadriceps muscle (tissue),"treadmill exercise (1hr) , treadmill exercise (1hr) , treadmill exercise (1hr)",1,131M,1 +961,SRR3313820,Sun2017enhancer,M. musculus,GRO-seq,quadriceps muscle (tissue),"treadmill exercise (1hr) , treadmill exercise (1hr) , treadmill exercise (1hr)",1,124M,1 +962,SRR3317155,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),nan,1,18M,2 +963,SRR3317156,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),nan,1,11M,4 +964,SRR3317157,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),nan,1,28M,1 +965,SRR3317158,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),nan,1,10M,4 +966,SRR3317159,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),nan,1,22M,1 +967,SRR3317160,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),nan,2,38M,3 +968,SRR3317161,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),nan,2,37M,2 +969,SRR3317162,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),nan,2,37M,2 +970,SRR3317163,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),nan,2,42M,3 +971,SRR3317164,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),nan,2,45M,2 +972,SRR3407137,Daniel2018nuclear,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"interleukin-4 (1day) , rosiglitazone (1hr)",1,24M,3 +973,SRR3407138,Daniel2018nuclear,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"interleukin-4 (1day) , DMSO/ethanol (1hr)",1,19M,3 +974,SRR3407139,Daniel2018nuclear,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"interleukin-4 (1day) , rosiglitazone (1hr)",2,22M,3 +975,SRR3407140,Daniel2018nuclear,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"interleukin-4 (1day) , DMSO/ethanol (1hr)",2,21M,3 +976,SRR3476588,Chen2016cutoff,D. melanogaster,GRO-seq,ovary (tissue),nan,1,51M,5 +977,SRR3476589,Chen2016cutoff,D. melanogaster,GRO-seq,ovary (tissue),nan,1,38M,5 +978,SRR3500459,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),PJ34 (1hr),1,23M,1 +979,SRR352501,Khodor2011nascent,D. melanogaster,other,S2 (cell line),nan,1,14M,3 +980,SRR352502,Khodor2011nascent,D. melanogaster,other,S2 (cell line),nan,2,12M,3 +981,SRR352503,Khodor2011nascent,D. melanogaster,other,S2 (cell line),nan,1,24M,4 +982,SRR352504,Khodor2011nascent,D. melanogaster,other,S2 (cell line),nan,2,23M,4 +983,SRR352505,Khodor2011nascent,D. melanogaster,other,head (tissue),nan,1,18M,2 +984,SRR352506,Khodor2011nascent,D. melanogaster,other,head (tissue),nan,2,18M,2 +985,SRR3535362,Yang2017glucocorticoid,H. sapiens,GRO-seq,MCF7 (cell line),"ICI 182,780 (3hr)",1,40M,1 +986,SRR3535363,Yang2017glucocorticoid,H. sapiens,GRO-seq,MCF7 (cell line),"ICI 182,780 (3hr) , dexamethasone (1hr)",1,38M,2 +987,SRR3535364,Yang2017glucocorticoid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,43M,2 +988,SRR3535365,Yang2017glucocorticoid,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (1hr) , dexamethasone (1hr)",1,34M,3 +989,SRR354106,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),nan,1,22M,5 +990,SRR3541128,Tan2018dismissal,H. sapiens,PRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,49M,3 +991,SRR3541129,Tan2018dismissal,H. sapiens,PRO-seq,MCF7 (cell line),ethanol (1hr),1,48M,2 +992,SRR3541130,Tan2018dismissal,H. sapiens,PRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,46M,3 +993,SRR3541131,Tan2018dismissal,H. sapiens,PRO-seq,MCF7 (cell line),ethanol (1hr),1,46M,3 +994,SRR3541132,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,75M,2 +995,SRR3541133,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,63M,2 +996,SRR3541134,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,42M,2 +997,SRR3541135,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,58M,2 +998,SRR3541136,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,58M,2 +999,SRR3541137,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),2,42M,2 +1000,SRR3541138,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,52M,2 +1001,SRR3541139,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),2,32M,2 +1002,SRR3546394,Boija2017cbp,D. melanogaster,PRO-seq,S2 (cell line),C37 control drug (10min),1,29M,4 +1003,SRR3546395,Boija2017cbp,D. melanogaster,PRO-seq,S2 (cell line),C37 control drug (10min),2,27M,3 +1004,SRR3546396,Boija2017cbp,D. melanogaster,PRO-seq,S2 (cell line),C646 CBP inhibitor (10min),1,91M,4 +1005,SRR3546397,Boija2017cbp,D. melanogaster,PRO-seq,S2 (cell line),C646 CBP inhibitor (10min),2,35M,3 +1006,SRR3555068,Kim2018pluripotency,M. musculus,PRO-cap,ESC (cell line),nan,1,32M,4 +1007,SRR3555069,Kim2018pluripotency,M. musculus,PRO-cap,peritoneal macrophage (primary),nan,1,16M,5 +1008,SRR3619367,Vian2018energetics,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD180 (3hr) , hydroxytamoxifen , interleukin-4 (3hr) , lipopolysaccharide (3hr)",1,197M,3 +1009,SRR3619368,Vian2018energetics,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD180 (3hr) , interleukin-4 (3hr) , lipopolysaccharide (3hr)",1,212M,3 +1010,SRR3619369,Vian2018energetics,M. musculus,GRO-seq,splenic B cell (primary),nan,1,213M,3 +1011,SRR3633296,Li2017grid,H. sapiens,GRO-seq,MDA-MB-231 (cell line),DMSO (6hr),1,17M,4 +1012,SRR3633297,Li2017grid,H. sapiens,GRO-seq,MDA-MB-231 (cell line),DMSO (6hr),2,18M,4 +1013,SRR3633298,Li2017grid,H. sapiens,GRO-seq,MDA-MB-231 (cell line),JQ1 (6hr),1,19M,4 +1014,SRR3633299,Li2017grid,H. sapiens,GRO-seq,MDA-MB-231 (cell line),JQ1 (6hr),2,18M,4 +1015,SRR3647033,Hetzel2016nascent,A. thaliana,GRO-cap,seed (tissue),nan,1,17M,3 +1016,SRR3647034,Hetzel2016nascent,A. thaliana,GRO-seq,seed (tissue),nan,1,45M,4 +1017,SRR3647035,Hetzel2016nascent,A. thaliana,GRO-seq,seed (tissue),nan,2,50M,3 +1018,SRR3657419,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),"DRB (210min) , adeno-Cre virus (4hr)",1,4M,5 +1019,SRR3657420,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),"DRB (210min) , adeno-Cre virus (4hr)",1,18M,2 +1020,SRR3679879,Johnson2017biotin,M. musculus,GRO-seq,cortex (tissue),nan,1,62M,2 +1021,SRR3679880,Johnson2017biotin,M. musculus,GRO-seq,cortex (tissue),nan,2,61M,1 +1022,SRR3679881,Johnson2017biotin,M. musculus,GRO-seq,cortex (tissue),nan,1,67M,2 +1023,SRR3679882,Johnson2017biotin,M. musculus,GRO-seq,cortex (tissue),nan,2,79M,2 +1024,SRR3713700,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),DMSO (1hr),1,33M,1 +1025,SRR3713701,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (1hr),1,41M,1 +1026,SRR3713702,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),MS417 (1hr),1,46M,1 +1027,SRR3713703,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),DMSO (3hr),1,40M,1 +1028,SRR3713704,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (3hr),1,34M,1 +1029,SRR3713705,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),MS417 (3hr),1,52M,1 +1030,SRR3713712,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),nan,1,41M,1 +1031,SRR3713713,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),nan,2,54M,2 +1032,SRR3713714,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (15min),1,39M,2 +1033,SRR3713715,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (15min),2,60M,2 +1034,SRR3713716,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (30min),1,44M,2 +1035,SRR3713717,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (30min),2,34M,2 +1036,SRR3713718,Zhao2016high,H. sapiens,PRO-seq,acute myeloid leukemia cell (primary),DMSO (1hr),1,38M,2 +1037,SRR3713719,Zhao2016high,H. sapiens,PRO-seq,acute myeloid leukemia cell (primary),JQ1 (1hr),1,53M,3 +1038,SRR3728886,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),"TNF-alpha (2hr) , dihydrotestosterone (2hr)",1,18M,2 +1039,SRR3728887,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),"TNF-alpha (2hr) , dihydrotestosterone (2hr)",2,20M,1 +1040,SRR3728888,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (2hr),1,22M,1 +1041,SRR3728889,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (2hr),2,19M,2 +1042,SRR3728890,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),DMSO (2hr),1,18M,2 +1043,SRR3728891,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),DMSO (2hr),2,13M,3 +1044,SRR3728892,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),TNF-alpha (2hr),1,20M,2 +1045,SRR3728893,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),TNF-alpha (2hr),2,19M,2 +1046,SRR3745363,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,48M,3 +1047,SRR3745364,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,43M,2 +1048,SRR3923617,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),ethanol (2hr),1,20M,1 +1049,SRR3923618,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),ethanol (2hr),2,22M,1 +1050,SRR3923619,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),R1881 (30min),1,24M,1 +1051,SRR3923620,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),R1881 (30min),2,24M,1 +1052,SRR3923621,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),R1881 (2hr),1,28M,1 +1053,SRR3923622,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),R1881 (2hr),2,22M,1 +1054,SRR3996482,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA M1bp (5day),1,32M,3 +1055,SRR3996483,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA M1bp (5day),2,37M,3 +1056,SRR3996484,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA M1bp (5day) , heat shock (20min)",1,20M,3 +1057,SRR3996485,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA M1bp (5day) , heat shock (20min)",2,20M,3 +1058,SRR3996486,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),3,30M,3 +1059,SRR3996487,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),4,56M,3 +1060,SRR3996488,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA LacZ (5day) , heat shock (20min)",3,23M,3 +1061,SRR3996489,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA LacZ (5day) , heat shock (20min)",4,24M,3 +1062,SRR4001595,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),ethanol (4hr),1,15M,3 +1063,SRR4001596,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),ethanol (4hr),2,18M,2 +1064,SRR4001597,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),dihydrotestosterone (4hr),1,16M,2 +1065,SRR4001598,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),dihydrotestosterone (4hr),2,19M,2 +1066,SRR4012393,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",1,42M,3 +1067,SRR4012413,Danko2018dynamic,P. troglodytes,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",3,55M,1 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sapiens,other,SEM (cell line),nan,3,93M,1 +1100,SRR4053667,Godfrey2017mll,H. sapiens,other,SEM (cell line),nan,1,88M,1 +1101,SRR4053668,Godfrey2017mll,H. sapiens,other,SEM (cell line),nan,2,89M,1 +1102,SRR4053669,Godfrey2017mll,H. sapiens,other,SEM (cell line),nan,3,88M,1 +1103,SRR408117,Marazzi2012suppression,H. sapiens,GRO-seq,A549 (cell line),nan,1,97M,4 +1104,SRR408118,Marazzi2012suppression,H. sapiens,GRO-seq,A549 (cell line),influenza A virus Flag-NS1 (12hr),1,90M,3 +1105,SRR408119,Marazzi2012suppression,H. sapiens,GRO-seq,A549 (cell line),influenza A virus Flag-deltaPAF (12hr),1,96M,3 +1106,SRR4090098,Andrysik2017identification,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),1,55M,4 +1107,SRR4090099,Andrysik2017identification,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),2,137M,3 +1108,SRR4090100,Andrysik2017identification,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (1hr),1,161M,4 +1109,SRR4090101,Andrysik2017identification,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (1hr),2,148M,3 +1110,SRR4090102,Andrysik2017identification,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (1hr),1,39M,1 +1111,SRR4090103,Andrysik2017identification,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (1hr),2,48M,1 +1112,SRR4090104,Andrysik2017identification,H. sapiens,GRO-seq,MCF7 (cell line),nutlin-3 (1hr),1,39M,1 +1113,SRR4090105,Andrysik2017identification,H. sapiens,GRO-seq,MCF7 (cell line),nutlin-3 (1hr),2,37M,1 +1114,SRR4090106,Andrysik2017identification,H. sapiens,GRO-seq,SJSA (cell line),DMSO (1hr),1,45M,1 +1115,SRR4090107,Andrysik2017identification,H. sapiens,GRO-seq,SJSA (cell line),DMSO (1hr),2,164M,2 +1116,SRR4090108,Andrysik2017identification,H. sapiens,GRO-seq,SJSA (cell line),nutlin-3 (1hr),1,53M,1 +1117,SRR4090109,Andrysik2017identification,H. sapiens,GRO-seq,SJSA (cell line),nutlin-3 (1hr),2,49M,1 +1118,SRR4305537,Godfrey2017mll,H. sapiens,other,SEM (cell line),DMSO (7day),1,42M,1 +1119,SRR4305538,Godfrey2017mll,H. sapiens,other,SEM (cell line),DMSO (7day),2,44M,1 +1120,SRR4305539,Godfrey2017mll,H. sapiens,other,SEM (cell line),DMSO (7day),3,44M,1 +1121,SRR4305540,Godfrey2017mll,H. sapiens,other,SEM (cell line),pinometostat (7day),1,49M,1 +1122,SRR4305541,Godfrey2017mll,H. sapiens,other,SEM (cell line),pinometostat (7day),2,51M,1 +1123,SRR4305542,Godfrey2017mll,H. sapiens,other,SEM (cell line),pinometostat (7day),3,39M,1 +1124,SRR4423740,Akulenko2018transcriptional,D. melanogaster,GRO-seq,ovary (tissue),nan,1,18M,3 +1125,SRR4423741,Akulenko2018transcriptional,D. melanogaster,GRO-seq,ovary (tissue),nan,1,20M,3 +1126,SRR4454567,Vihervaara2017transcriptional,H. sapiens,PRO-seq,K562 (cell line),nan,1,98M,2 +1127,SRR4454568,Vihervaara2017transcriptional,H. sapiens,PRO-seq,K562 (cell line),nan,2,35M,1 +1128,SRR4454569,Vihervaara2017transcriptional,H. sapiens,PRO-seq,K562 (cell line),heat shock (30min),1,130M,2 +1129,SRR4454570,Vihervaara2017transcriptional,H. sapiens,PRO-seq,K562 (cell line),heat shock (30min),2,33M,1 +1130,SRR4842300,Wang2017cell,M. musculus,GRO-seq,splenic B cell (primary),nan,1,190M,4 +1131,SRR4842301,Wang2017cell,M. musculus,GRO-seq,splenic B cell (primary),nan,2,198M,4 +1132,SRR4842302,Wang2017cell,M. musculus,GRO-seq,splenic B cell (primary),"cell sorting EGFP+ (1hr) , cell sorting EGFP- (1hr) , nocodazole (6hr)",1,185M,4 +1133,SRR4842303,Wang2017cell,M. musculus,GRO-seq,splenic B cell (primary),"cell sorting EGFP+ (1hr) , cell sorting EGFP- (1hr) , nocodazole (6hr)",2,160M,4 +1134,SRR497911,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),1,7M,4 +1135,SRR497921,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (160min),1,12M,4 +1136,SRR5034773,Ngoc2017human,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,20M,3 +1137,SRR5034774,Ngoc2017human,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,29M,2 +1138,SRR5084317,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),nan,1,13M,3 +1139,SRR5084318,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (30min),1,11M,3 +1140,SRR5084319,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (2hr),1,20M,3 +1141,SRR5084320,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (4hr),1,15M,3 +1142,SRR5084321,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),nan,2,19M,2 +1143,SRR5084322,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (30min),2,21M,2 +1144,SRR5084323,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (2hr),2,24M,3 +1145,SRR5084324,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (4hr),2,25M,3 +1146,SRR5085734,Williamson2017uv,H. sapiens,GRO-seq,MRC5VA (cell line),DRB (210min),1,46M,1 +1147,SRR5085735,Williamson2017uv,H. sapiens,GRO-seq,MRC5VA (cell line),DRB (210min),1,49M,1 +1148,SRR5085736,Williamson2017uv,H. sapiens,GRO-seq,MRC5VA (cell line),DRB (210min),1,73M,1 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(cell line),nan,1,22M,2 +1169,SRR5109936,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,HEK293T (cell line),nan,2,22M,1 +1170,SRR5109937,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,A549 (cell line),nan,1,20M,2 +1171,SRR5109938,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,ARPE-19 (cell line),nan,1,19M,2 +1172,SRR5109939,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,HeLa (cell line),nan,1,22M,1 +1173,SRR5109940,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,HepG2 (cell line),nan,1,17M,2 +1174,SRR5109942,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,MRC5 (cell line),nan,1,19M,2 +1175,SRR5109943,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,NHA (cell line),nan,1,22M,1 +1176,SRR5109944,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,NHA (cell line),nan,2,20M,1 +1177,SRR5109945,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,SKOV3 (cell line),nan,1,19M,2 +1178,SRR5109946,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,T98G (cell line),nan,1,20M,1 +1179,SRR5109947,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,THP1 (cell line),nan,1,21M,1 +1180,SRR5109948,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,U87 (cell line),nan,1,18M,2 +1181,SRR513507,Fuda2012fcp1,D. melanogaster,GRO-seq,S2 (cell line),dsRNA LacZ (5day),1,2M,5 +1182,SRR513508,Fuda2012fcp1,D. melanogaster,GRO-seq,S2 (cell line),dsRNA LacZ (5day),2,8M,4 +1183,SRR513509,Fuda2012fcp1,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Fcp1 (5day),1,2M,5 +1184,SRR513510,Fuda2012fcp1,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Fcp1 (5day),2,10M,4 +1185,SRR5144955,Zhu2017comprehensive,M. musculus,GRO-seq,ECOMG (cell line),17-beta-estradiol withdrawal (5day),1,13M,4 +1186,SRR5144956,Zhu2017comprehensive,M. musculus,GRO-seq,ECOMG (cell line),17-beta-estradiol withdrawal (5day),2,38M,4 +1187,SRR5144957,Zhu2017comprehensive,M. musculus,GRO-seq,ECOMG (cell line),nan,1,13M,3 +1188,SRR5144958,Zhu2017comprehensive,M. musculus,GRO-seq,ECOMG (cell line),nan,2,34M,3 +1189,SRR514959,Schoeberl2012biased,T. thermophila,GRO-seq,micronucleus (tissue),mating (2hr),1,94M,5 +1190,SRR5150535,Ngoc2017human,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,8M,4 +1191,SRR5150536,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),nan,1,33M,1 +1192,SRR5150537,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),nan,2,26M,1 +1193,SRR5150538,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),nan,1,33M,1 +1194,SRR5150539,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),nan,2,30M,1 +1195,SRR5150540,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),ethanol (40min),1,28M,1 +1196,SRR5150541,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,33M,1 +1197,SRR5150542,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),hydroxytamoxifen (40min),1,28M,1 +1198,SRR5150543,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),ethanol (40min),1,25M,1 +1199,SRR5150544,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,28M,1 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infection medium (3hr),3,40M,1 +1514,SRR6216708,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),HSV-1 (3hr),1,44M,1 +1515,SRR6216709,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),HSV-1 (3hr),2,51M,1 +1516,SRR6216710,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),HSV-1 (3hr),3,58M,1 +1517,SRR6216711,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),mock infection medium (3hr),1,39M,1 +1518,SRR6216712,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),mock infection medium (3hr),2,54M,1 +1519,SRR6216713,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),mock infection medium (3hr),3,45M,1 +1520,SRR6246979,Czimmerer2018transcription,M. musculus,GRO-seq,bone marrow derived macrophage (primary),interleukin-4 (1hr),1,36M,4 +1521,SRR6247018,Czimmerer2018transcription,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,1,37M,4 +1522,SRR6347627,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"ethanol (30min) , 1,6-hexanediol (5min)",1,33M,1 +1523,SRR6347628,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"1,6-hexanediol (5min) , 17-beta-estradiol (30min)",1,26M,1 +1524,SRR6347629,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"ethanol (30min) , 2,5-hexanediol (5min)",1,27M,1 +1525,SRR6347630,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (30min) , 2,5-hexanediol (5min)",1,28M,1 +1526,SRR6376814,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),nan,3,36M,3 +1527,SRR639050,Jin2013high,H. sapiens,GRO-seq,IMR90 (cell line),nan,1,77M,2 +1528,SRR639051,Jin2013high,H. sapiens,GRO-seq,IMR90 (cell line),TNF-alpha (1hr),1,82M,2 +1529,SRR639125,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),nan,1,6M,4 +1530,SRR639126,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),nan,2,33M,1 +1531,SRR639127,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),nan,1,37M,1 +1532,SRR639128,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),nan,2,40M,1 +1533,SRR639129,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),nan,1,38M,2 +1534,SRR639130,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),nan,2,28M,1 +1535,SRR639131,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),starvation (1day),1,11M,3 +1536,SRR639132,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),starvation (1day),2,31M,1 +1537,SRR639133,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),nan,1,32M,2 +1538,SRR639134,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),nan,2,48M,2 +1539,SRR639142,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),nan,1,59M,4 +1540,SRR639143,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),nan,1,20M,4 +1541,SRR639144,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),nan,1,49M,4 +1542,SRR639145,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),nan,1,18M,4 +1543,SRR639146,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),nan,1,60M,5 +1544,SRR639147,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),nan,1,15M,4 +1545,SRR639148,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),nan,1,56M,4 +1546,SRR639149,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),nan,1,22M,4 +1547,SRR6453429,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (1hr) , high fat diet (12day)",1,99M,4 +1548,SRR6453430,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (4hr) , high fat diet (12day)",1,160M,4 +1549,SRR6453431,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (7hr) , high fat diet (12day)",1,135M,4 +1550,SRR6453432,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (10hr) , high fat diet (12day)",1,134M,4 +1551,SRR6453433,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (12hr) , high fat diet (12day)",1,60M,3 +1552,SRR6453434,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (12hr) , high fat diet (12day)",1,132M,4 +1553,SRR6453435,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (12hr) , high fat diet (12day)",1,132M,4 +1554,SRR6453436,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (12hr) , high fat diet (12day)",1,117M,4 +1555,SRR646576,Rozhkov2013multiple,D. melanogaster,GRO-seq,ovary (tissue),nan,1,16M,3 +1556,SRR646577,Rozhkov2013multiple,D. melanogaster,GRO-seq,ovary (tissue),nan,1,18M,3 +1557,SRR646578,Rozhkov2013multiple,D. melanogaster,GRO-seq,ovary (tissue),nan,1,16M,3 +1558,SRR646579,Rozhkov2013multiple,D. melanogaster,GRO-seq,ovary (tissue),nan,1,15M,3 +1559,SRR6492219,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),hydroxytamoxifen (3day),1,88M,4 +1560,SRR6492220,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (1hr)",1,38M,3 +1561,SRR6492221,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (6hr)",1,92M,4 +1562,SRR6492222,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),hydroxytamoxifen (3day),2,64M,3 +1563,SRR6492223,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (1hr)",2,50M,3 +1564,SRR6492224,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (6hr)",2,67M,3 +1565,SRR6492225,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),hydroxytamoxifen (3day),1,40M,3 +1566,SRR6492226,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (1hr)",1,60M,4 +1567,SRR6492227,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (6hr)",1,116M,4 +1568,SRR6492228,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),hydroxytamoxifen (3day),2,59M,3 +1569,SRR6492229,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (1hr)",2,52M,2 +1570,SRR6492230,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (6hr)",2,44M,2 +1571,SRR6498830,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),1,79M,1 +1572,SRR6498831,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),2,95M,2 +1573,SRR6498832,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),3,126M,2 +1574,SRR6498833,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),1,80M,1 +1575,SRR6498834,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),2,95M,2 +1576,SRR6498835,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),3,125M,1 +1577,SRR6498836,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),1,94M,1 +1578,SRR6498837,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),2,114M,2 +1579,SRR6498838,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),3,118M,3 +1580,SRR6508247,Cardamone2018mitochondrial,M. musculus,GRO-seq,3T3-L1 (cell line),nan,1,43M,3 +1581,SRR6508248,Cardamone2018mitochondrial,M. musculus,GRO-seq,3T3-L1 (cell line),FCCP (3hr),1,35M,3 +1582,SRR6508249,Cardamone2018mitochondrial,M. musculus,GRO-seq,3T3-L1 (cell line),nan,1,30M,4 +1583,SRR6508250,Cardamone2018mitochondrial,M. musculus,GRO-seq,3T3-L1 (cell line),FCCP (3hr),1,41M,4 +1584,SRR6660158,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,10M,4 +1585,SRR6660159,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,15M,4 +1586,SRR6660160,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),nan,1,12M,4 +1587,SRR6660161,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),nan,2,20M,4 +1588,SRR6660174,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,48M,2 +1589,SRR6660175,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,52M,4 +1590,SRR6660176,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,1,58M,1 +1591,SRR6660177,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,2,74M,3 +1592,SRR6660226,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,49M,2 +1593,SRR6660227,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,90M,1 +1594,SRR6660228,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,1,46M,1 +1595,SRR6660229,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,2,47M,1 +1596,SRR6660276,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,34M,2 +1597,SRR6660277,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,13M,3 +1598,SRR6660278,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,1,30M,1 +1599,SRR6660279,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,2,12M,3 +1600,SRR6660292,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,59M,2 +1601,SRR6660293,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,1,42M,2 +1602,SRR6660300,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,7M,5 +1603,SRR6660301,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,42M,3 +1604,SRR6660302,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),nan,1,1M,5 +1605,SRR6660303,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),nan,2,39M,2 +1606,SRR6660316,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,34M,2 +1607,SRR6660317,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,104M,4 +1608,SRR6660318,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,1,52M,1 +1609,SRR6660319,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,2,90M,4 +1610,SRR6660349,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,48M,3 +1611,SRR6660350,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,7M,4 +1612,SRR6660351,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),nan,1,7M,4 +1613,SRR6660352,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),nan,2,34M,2 +1614,SRR6660365,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,51M,1 +1615,SRR6660366,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,107M,2 +1616,SRR6660367,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,1,47M,2 +1617,SRR6660368,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,2,35M,1 +1618,SRR6660399,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,5M,5 +1619,SRR6660400,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,8M,4 +1620,SRR6660401,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),nan,1,11M,4 +1621,SRR6660402,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),nan,2,9M,4 +1622,SRR6660416,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,55M,3 +1623,SRR6660417,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,28M,1 +1624,SRR6660418,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,1,45M,2 +1625,SRR6660419,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),nan,2,0M,5 +1626,SRR6661081,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),nan,1,None,0 +1627,SRR6661082,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),nan,2,None,0 +1628,SRR6661083,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),nan,1,None,0 +1629,SRR6661084,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),nan,2,None,0 +1630,SRR6661086,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),nan,2,None,0 +1631,SRR6661087,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),nan,1,None,0 +1632,SRR6661088,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),nan,2,None,0 +1633,SRR6687446,Daniel2018nuclear,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"LG100268 (1hr) , interleukin-4 (1day)",1,22M,3 +1634,SRR6727862,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,43M,4 +1635,SRR6727863,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,2,17M,3 +1636,SRR6727864,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,46M,4 +1637,SRR6727865,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,2,19M,3 +1638,SRR6727866,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,46M,4 +1639,SRR6727867,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,2,18M,3 +1640,SRR6727868,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,33M,4 +1641,SRR6727869,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,2,28M,4 +1642,SRR6727870,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,34M,4 +1643,SRR6727871,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,2,24M,3 +1644,SRR6727872,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,43M,4 +1645,SRR6727873,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,2,12M,3 +1646,SRR6727874,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,49M,4 +1647,SRR6727875,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,2,28M,4 +1648,SRR6727876,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,46M,4 +1649,SRR6727877,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,2,21M,3 +1650,SRR6727878,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,50M,4 +1651,SRR6727879,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,2,25M,3 +1652,SRR6727880,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,47M,4 +1653,SRR6727881,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,2,27M,3 +1654,SRR6727882,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,28M,4 +1655,SRR6727883,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,52M,4 +1656,SRR6727884,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,43M,4 +1657,SRR6727885,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,51M,4 +1658,SRR6727886,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,43M,4 +1659,SRR6727887,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,45M,4 +1660,SRR6727888,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,51M,4 +1661,SRR6727889,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,52M,4 +1662,SRR6727890,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,49M,4 +1663,SRR6727891,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,41M,4 +1664,SRR6727892,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,44M,4 +1665,SRR6727893,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,52M,4 +1666,SRR6727894,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,55M,4 +1667,SRR6727895,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,48M,3 +1668,SRR6727896,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,53M,4 +1669,SRR6727897,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,45M,4 +1670,SRR6727898,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,48M,4 +1671,SRR6727899,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,48M,4 +1672,SRR6727900,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,51M,4 +1673,SRR6727901,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,50M,4 +1674,SRR6727902,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,45M,4 +1675,SRR6727903,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,58M,4 +1676,SRR6727904,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,52M,4 +1677,SRR6727905,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,49M,4 +1678,SRR6727906,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,49M,4 +1679,SRR6727907,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,48M,4 +1680,SRR6727908,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,57M,4 +1681,SRR6727909,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,48M,4 +1682,SRR6727910,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,49M,4 +1683,SRR6727911,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,42M,4 +1684,SRR6727912,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,62M,4 +1685,SRR6727913,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,54M,4 +1686,SRR6727914,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,75M,4 +1687,SRR6727915,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),nan,1,52M,4 +1688,SRR6727916,Kristjansdottir2020population,H. 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doxycycline (1day)",1,10M,3 +1975,SRR7879135,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"DRB (3hr) , bromouridine (10min) , water (1day)",1,11M,3 +1976,SRR7879136,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"DRB (3hr) , bromouridine (20min) , water (1day)",1,9M,4 +1977,SRR7879137,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"DRB (3hr) , bromouridine (5min) , water (1day)",1,8M,4 +1978,SRR797530,Ji2013sr,M. musculus,GRO-seq,MEF (primary),nan,1,12M,3 +1979,SRR797531,Ji2013sr,M. musculus,GRO-seq,MEF (primary),doxycycline (4day),1,8M,4 +1980,SRR797532,Ji2013sr,M. musculus,GRO-seq,MEF (primary),nan,1,18M,3 +1981,SRR797533,Ji2013sr,M. musculus,GRO-seq,MEF (primary),doxycycline (2day),1,21M,4 +1982,SRR797534,Ji2013sr,M. musculus,GRO-seq,MEF (primary),nan,1,23M,4 +1983,SRR797535,Ji2013sr,M. musculus,GRO-seq,MEF (primary),DRB (3hr),1,23M,5 +1984,SRR7988484,Takahashi2020role,H. sapiens,PRO-seq,HEK293T (cell line),nan,1,141M,2 +1985,SRR7988486,Takahashi2020role,H. sapiens,PRO-seq,HEK293T (cell line),nan,2,146M,2 +1986,SRR7988488,Takahashi2020role,H. sapiens,PRO-seq,HEK293T (cell line),nan,1,163M,2 +1987,SRR7988490,Takahashi2020role,H. sapiens,PRO-seq,HEK293T (cell line),nan,2,123M,2 +1988,SRR8033049,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),nan,1,38M,2 +1989,SRR8033050,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),nan,2,45M,1 +1990,SRR8033051,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (30min),1,28M,1 +1991,SRR8033052,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (1hr),1,30M,2 +1992,SRR8033053,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (2hr),1,33M,1 +1993,SRR8033054,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (4hr),1,25M,2 +1994,SRR8033055,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (8hr),1,44M,2 +1995,SRR8033056,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (12hr),1,29M,1 +1996,SRR8033057,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (1day),1,28M,1 +1997,SRR8033058,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (1day),2,41M,1 +1998,SRR8111714,Leroy2019ledgf,H. sapiens,PRO-seq,myoblast (primary),nan,1,78M,3 +1999,SRR8111715,Leroy2019ledgf,H. sapiens,PRO-seq,myoblast (primary),nan,1,44M,2 +2000,SRR8111716,Leroy2019ledgf,H. sapiens,PRO-seq,myoblast (primary),nan,1,71M,2 +2001,SRR8111717,Leroy2019ledgf,H. sapiens,PRO-seq,myoblast (primary),nan,1,77M,3 +2002,SRR8111718,Leroy2019ledgf,H. sapiens,PRO-seq,myoblast (primary),nan,1,108M,2 +2003,SRR8137173,Wang2019identification,H. sapiens,PRO-seq,K562 (cell line),nan,1,84M,1 +2004,SRR816998,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,27M,1 +2005,SRR816999,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),2,25M,1 +2006,SRR817000,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,34M,1 +2007,SRR817001,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),2,23M,1 +2008,SRR817002,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,42M,3 +2009,SRR817003,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,31M,2 +2010,SRR8206345,Herold2019recruitment,H. sapiens,GRO-seq,SHEP (cell line),various,1,152M,4 +2011,SRR8234171,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),nan,1,31M,1 +2012,SRR8234172,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),nan,2,25M,1 +2013,SRR8234173,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),nan,3,25M,1 +2014,SRR8234174,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),nan,1,33M,1 +2015,SRR8234175,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),nan,2,26M,1 +2016,SRR8234176,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),nan,3,36M,1 +2017,SRR8234177,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),nan,1,28M,1 +2018,SRR8234178,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),nan,2,27M,1 +2019,SRR8234179,Sendinc2019pcif1,H. sapiens,PRO-cap,MEL624 (cell line),nan,3,26M,1 +2020,SRR8235064,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA beta-galactosidase (60hr),1,16M,3 +2021,SRR8235065,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA beta-galactosidase (60hr),2,20M,2 +2022,SRR8235066,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA beta-galactosidase (60hr),3,14M,3 +2023,SRR8235067,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA IntS9 (60hr),1,15M,3 +2024,SRR8235068,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA IntS9 (60hr),2,14M,3 +2025,SRR8235069,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA IntS9 (60hr),3,17M,2 +2026,SRR826227,Lam2013rev,M. musculus,GRO-cap,RAW264.7 (cell line),nan,1,9M,4 +2027,SRR828695,Galbraith2013hif1a,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),1,55M,4 +2028,SRR828696,Galbraith2013hif1a,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),2,199M,4 +2029,SRR828729,Galbraith2013hif1a,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),3,137M,3 +2030,SRR836116,Heinz2013effect,M. musculus,GRO-seq,peritoneal macrophage (primary),nan,1,64M,2 +2031,SRR836117,Heinz2013effect,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),1,63M,3 +2032,SRR836118,Heinz2013effect,M. musculus,GRO-seq,peritoneal macrophage (primary),nan,1,65M,1 +2033,SRR836119,Heinz2013effect,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),1,63M,2 +2034,SRR8364243,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),nan,1,54M,1 +2035,SRR8364244,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),nan,2,57M,3 +2036,SRR8364245,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (3day),1,33M,1 +2037,SRR8364246,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (3day),2,48M,1 +2038,SRR8364247,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (7day),1,33M,3 +2039,SRR8364248,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (7day),2,39M,1 +2040,SRR8384736,Korkmaz2019crispr,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,34M,1 +2041,SRR8384737,Korkmaz2019crispr,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,25M,1 +2042,SRR8384738,Korkmaz2019crispr,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,27M,1 +2043,SRR8419429,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"ICI 182,780 (3hr)",1,55M,1 +2044,SRR8419430,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (30min) , 2,5-hexanediol (5min)",1,56M,1 +2045,SRR8419431,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (15hr) , 2,5-hexanediol (5min)",1,46M,1 +2046,SRR8429046,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),ethanol (10min),1,83M,2 +2047,SRR8429047,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),ethanol (10min),2,105M,4 +2048,SRR8429048,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),TNF-alpha (10min),1,82M,4 +2049,SRR8429049,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),TNF-alpha (10min),2,109M,3 +2050,SRR8429050,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),dexamethasone (10min),1,100M,4 +2051,SRR8429051,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),dexamethasone (10min),2,108M,4 +2052,SRR8429052,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),"TNF-alpha (10min) , dexamethasone (10min)",1,117M,4 +2053,SRR8429053,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),"TNF-alpha (10min) , dexamethasone (10min)",2,59M,4 +2054,SRR8429054,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),ethanol (30min),1,56M,3 +2055,SRR8429055,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),ethanol (30min),2,80M,4 +2056,SRR8429056,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),TNF-alpha (30min),1,74M,3 +2057,SRR8429057,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),TNF-alpha (30min),2,109M,4 +2058,SRR8429058,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),dexamethasone (30min),1,75M,3 +2059,SRR8429059,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),dexamethasone (30min),2,113M,4 +2060,SRR8429060,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),"TNF-alpha (30min) , dexamethasone (30min)",1,79M,3 +2061,SRR8429061,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),"TNF-alpha (30min) , dexamethasone (30min)",2,80M,4 +2062,SRR8451931,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (1hr) , HCMV strain Towne BAC (90min)",1,28M,2 +2063,SRR8451932,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"flavopiridol (1hr) , HCMV strain Towne BAC (90min)",1,27M,3 +2064,SRR8452660,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"flavopiridol (1hr) , HCMV strain Towne varS (90min)",1,26M,4 +2065,SRR8452661,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (1hr) , HCMV strain Towne varS (90min)",1,24M,4 +2066,SRR8456237,Parida2019nucleotide,H. sapiens,PRO-cap,foreskin fibroblast (primary),"DMSO (1hr) , HCMV strain Towne varS (90min)",1,53M,4 +2067,SRR8456238,Parida2019nucleotide,H. sapiens,PRO-cap,foreskin fibroblast (primary),"flavopiridol (1hr) , HCMV strain Towne varS (90min)",1,46M,5 +2068,SRR8457216,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"flavopiridol (1hr) , HCMV strain TB40/E (4hr)",1,63M,2 +2069,SRR8457217,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (1hr) , HCMV strain TB40/E (4hr)",1,67M,1 +2070,SRR8463311,Parida2019nucleotide,H. sapiens,PRO-cap,foreskin fibroblast (primary),"DMSO (1hr) , Mock infection (90min)",1,57M,4 +2071,SRR8463312,Parida2019nucleotide,H. sapiens,PRO-cap,foreskin fibroblast (primary),"flavopiridol (1hr) , Mock infection (90min)",1,49M,4 +2072,SRR8478992,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),nan,1,104M,1 +2073,SRR8478993,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),nan,2,77M,1 +2074,SRR8478994,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),1,118M,1 +2075,SRR8478995,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),2,86M,1 +2076,SRR8478996,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),nan,1,136M,2 +2077,SRR8478997,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),nan,2,65M,1 +2078,SRR8478998,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),1,133M,1 +2079,SRR8478999,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),2,66M,1 +2080,SRR8479000,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),nan,1,83M,1 +2081,SRR8479001,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),nan,2,128M,1 +2082,SRR8479002,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),1,161M,1 +2083,SRR8479003,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),2,141M,1 +2084,SRR8479004,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),nan,1,123M,1 +2085,SRR8479005,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),nan,2,94M,1 +2086,SRR8479006,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),1,163M,1 +2087,SRR8479007,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),2,165M,1 +2088,SRR8482945,Barucci2020small,C. elegans,PRO-seq,whole worm (organism),nan,1,17M,3 +2089,SRR8482946,Barucci2020small,C. elegans,PRO-seq,whole worm (organism),nan,2,21M,3 +2090,SRR8482947,Barucci2020small,C. elegans,PRO-seq,whole worm (organism),nan,1,25M,4 +2091,SRR8482948,Barucci2020small,C. elegans,PRO-seq,whole worm (organism),nan,2,25M,3 +2092,SRR8483105,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,35M,1 +2093,SRR8483106,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,47M,2 +2094,SRR8483107,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,46M,2 +2095,SRR8483108,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,46M,2 +2096,SRR8483109,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,38M,1 +2097,SRR8483110,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,43M,1 +2098,SRR8544024,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),1,117M,2 +2099,SRR8544025,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),2,108M,1 +2100,SRR8544026,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),1,111M,1 +2101,SRR8544027,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),2,172M,2 +2102,SRR8544028,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),1,114M,3 +2103,SRR8544029,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),2,200M,2 +2104,SRR8608051,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),DMSO (3hr),1,17M,3 +2105,SRR8608052,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),DMSO (3hr),2,20M,3 +2106,SRR8608053,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (3hr),1,17M,3 +2107,SRR8608054,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (3hr),2,17M,3 +2108,SRR8608055,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,1,21M,2 +2109,SRR8608056,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,2,26M,1 +2110,SRR8608057,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,3,13M,3 +2111,SRR8608058,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,4,12M,3 +2112,SRR8608059,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,1,15M,3 +2113,SRR8608060,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,2,17M,3 +2114,SRR8608061,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,3,20M,2 +2115,SRR8608062,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,4,11M,4 +2116,SRR8608063,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,1,17M,3 +2117,SRR8608064,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,2,23M,2 +2118,SRR8608065,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,3,16M,3 +2119,SRR8608066,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),nan,4,14M,3 +2120,SRR8608067,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),1,22M,2 +2121,SRR8608068,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),2,24M,1 +2122,SRR8608069,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),3,13M,3 +2123,SRR8608070,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),4,14M,3 +2124,SRR8608071,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),1,22M,2 +2125,SRR8608072,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),2,24M,1 +2126,SRR8608073,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),3,3M,5 +2127,SRR8608074,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),4,19M,2 +2128,SRR863647,Cecere2013zfp1,C. elegans,GRO-seq,whole worm (organism),nan,1,9M,4 +2129,SRR863648,Cecere2013zfp1,C. elegans,GRO-seq,whole worm (organism),nan,2,6M,4 +2130,SRR863649,Cecere2013zfp1,C. elegans,GRO-seq,whole worm (organism),nan,1,7M,4 +2131,SRR863650,Cecere2013zfp1,C. elegans,GRO-seq,whole worm (organism),nan,2,5M,4 +2132,SRR8669162,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),nan,1,17M,2 +2133,SRR8669163,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),nan,2,7M,4 +2134,SRR8669164,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),heat shock (30hr),1,20M,2 +2135,SRR8669165,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),heat shock (30hr),2,6M,4 +2136,SRR8669166,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),heat shock (1hr),1,35M,1 +2137,SRR8669167,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),"heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr)",1,15M,3 +2138,SRR8669168,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),"heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr)",2,8M,4 +2139,SRR8669169,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),"heat shock (30min) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr)",1,19M,2 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sapiens,GRO-seq,MCF7 (cell line),hydroxytamoxifen,2,70M,2 +2226,SRR8743260,Bi2020enhancer,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,37M,1 +2227,SRR8743261,Bi2020enhancer,H. sapiens,GRO-seq,MCF7 (cell line),doxycycline (2day),1,54M,1 +2228,SRR8743262,Bi2020enhancer,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,40M,1 +2229,SRR8743263,Bi2020enhancer,H. sapiens,GRO-seq,MCF7 (cell line),doxycycline (2day),1,47M,2 +2230,SRR8743264,Bi2020enhancer,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,48M,2 +2231,SRR8743265,Bi2020enhancer,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,43M,1 +2232,SRR8743266,Bi2020enhancer,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,46M,2 +2233,SRR8743267,Bi2020enhancer,H. sapiens,GRO-seq,MCF7 (cell line),hydroxytamoxifen,1,36M,1 +2234,SRR8743268,Bi2020enhancer,H. sapiens,GRO-seq,MCF7 (cell line),hydroxytamoxifen,1,41M,1 +2235,SRR8767369,Liu2020immediate,A. thaliana,GRO-seq,leaf (tissue),nan,1,71M,5 +2236,SRR8767370,Liu2020immediate,A. thaliana,GRO-seq,leaf (tissue),nan,2,104M,5 +2237,SRR8767371,Liu2020immediate,A. thaliana,GRO-seq,leaf (tissue),heat shock (5min),1,76M,4 +2238,SRR8767372,Liu2020immediate,A. thaliana,GRO-seq,leaf (tissue),heat shock (5min),2,98M,4 +2239,SRR8767373,Liu2020immediate,A. thaliana,GRO-seq,leaf (tissue),"heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min)",1,53M,4 +2240,SRR8767374,Liu2020immediate,A. thaliana,GRO-seq,leaf (tissue),"heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min)",2,68M,4 +2241,SRR8767375,Liu2020immediate,A. thaliana,GRO-seq,leaf (tissue),"heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , heat pretreatment (90min) , 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(1day) , PBS (2day)",1,38M,2 +2266,SRR8887163,Ma2020super,H. sapiens,GRO-seq,A2780 (cell line),"cisplatin (1day) , cisplatin (2day)",1,41M,2 +2267,SRR8887164,Ma2020super,H. sapiens,GRO-seq,A2780 (cell line),"PBS (1day) , PBS (2day)",1,35M,2 +2268,SRR8887165,Ma2020super,H. sapiens,GRO-seq,A2780 (cell line),"cisplatin (1day) , cisplatin (2day)",1,46M,3 +2269,SRR8887174,Ma2020super,H. sapiens,GRO-seq,A2780 (cell line),"PBS (1day) , PBS (2day)",2,7M,4 +2270,SRR8887175,Ma2020super,H. sapiens,GRO-seq,A2780 (cell line),"cisplatin (1day) , cisplatin (2day)",2,11M,3 +2271,SRR892016,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),nan,1,21M,2 +2272,SRR892017,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,26M,2 +2273,SRR892018,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),nan,1,28M,2 +2274,SRR892019,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,20M,2 +2275,SRR892025,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),nan,1,21M,1 +2276,SRR892026,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),nan,1,26M,1 +2277,SRR892027,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),nan,1,38M,1 +2278,SRR892028,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,11M,3 +2279,SRR892029,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,28M,1 +2280,SRR892030,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,30M,1 +2281,SRR8950256,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),nan,1,25M,3 +2282,SRR8950257,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),nan,2,36M,2 +2283,SRR8950259,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (2day) , interleukin-4 (2day)",1,52M,1 +2284,SRR8950260,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (2day) , interleukin-4 (2day)",2,85M,3 +2285,SRR8950261,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (2day) , interleukin-4 (2day)",3,40M,1 +2286,SRR8950265,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),nan,1,21M,1 +2287,SRR8950266,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),nan,2,46M,1 +2288,SRR8950267,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),nan,3,31M,1 +2289,SRR8950268,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",1,31M,1 +2290,SRR8950269,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",2,29M,1 +2291,SRR8950270,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",3,79M,2 +2292,SRR8950272,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",1,38M,1 +2293,SRR8950273,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",2,48M,1 +2294,SRR8950277,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",1,39M,1 +2295,SRR8950278,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",2,39M,1 +2296,SRR8950279,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",3,38M,3 +2297,SRR8957130,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),1,44M,1 +2298,SRR8957131,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),2,51M,1 +2299,SRR8957132,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),3,58M,1 +2300,SRR8957133,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),4,42M,1 +2301,SRR8957134,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),5,27M,2 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(2hr) , serum starvation (15hr)",1,29M,1 +2376,SRR930685,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"flavopiridol (2hr) , serum starvation (15hr)",1,23M,3 +2377,SRR930686,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"IBET151 (2hr) , serum starvation (15hr)",1,28M,1 +2378,SRR930687,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , DMSO (2hr) , serum starvation (15hr)",1,19M,2 +2379,SRR930688,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , flavopiridol (2hr) , serum starvation (15hr)",1,16M,2 +2380,SRR930689,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , IBET151 (2hr) , serum starvation (15hr)",1,22M,1 +2381,SRR930690,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , flavopiridol (2hr) , serum starvation (15hr)",2,17M,4 +2382,SRR930717,Kaikkonen2013remodeling,M. musculus,GRO-seq,hematopoietic progenitor cell (cell line),nan,1,22M,1 +2383,SRR930718,Kaikkonen2013remodeling,M. musculus,GRO-seq,hematopoietic progenitor cell (cell line),Kdo2-Lipid A (1hr),1,19M,2 +2384,SRR930719,Kaikkonen2013remodeling,M. musculus,GRO-seq,hematopoietic progenitor cell (cell line),hydroxytamoxifen (1day),1,23M,1 +2385,SRR930720,Kaikkonen2013remodeling,M. musculus,GRO-seq,hematopoietic progenitor cell (cell line),"Kdo2-Lipid A (1hr) , hydroxytamoxifen (1day)",1,22M,1 +2386,SRR9336633,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),nan,1,19M,4 +2387,SRR9336634,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),nan,2,26M,3 +2388,SRR9336635,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),nan,3,54M,1 +2389,SRR9336636,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (20min),1,24M,3 +2390,SRR9336637,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell 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+2406,SRR9336653,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (1hr),3,26M,3 +2407,SRR9336654,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (6day),1,47M,1 +2408,SRR9336655,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (6day),2,51M,1 +2409,SRR9336656,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (6day),3,34M,2 +2410,SRR935117,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),DMSO (50min),1,23M,3 +2411,SRR935118,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),DMSO (50min),2,49M,2 +2412,SRR935119,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),triptolide (750s),1,20M,3 +2413,SRR935120,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),triptolide (750s),2,29M,2 +2414,SRR935123,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),triptolide (50min),1,23M,4 +2415,SRR935124,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),triptolide (50min),2,25M,4 +2416,SRR953377,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),nan,1,22M,3 +2417,SRR953378,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),nan,2,44M,4 +2418,SRR953379,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),nan,1,41M,3 +2419,SRR953380,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),nan,2,33M,4 +2420,SRR953381,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),nan,1,29M,3 +2421,SRR953382,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),nan,2,63M,4 +2422,SRR953383,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),nan,1,21M,4 +2423,SRR953384,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),nan,2,27M,4 +2424,SRR9602768,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Nedd4 intronic antisense oligonucleotide 2 (1day),1,151M,1 +2425,SRR9602769,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Nedd4 exonic antisense oligonucleotide 2 (1day),1,189M,1 +2426,SRR9602770,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),control antisense oligonucleotide (1day),1,162M,1 +2427,SRR9602771,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Atxn10 intronic antisense oligonucleotide 1 (1day),1,114M,1 +2428,SRR9602772,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),control antisense oligonucleotide (1day),1,80M,2 +2429,SRR9602773,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Nedd4 exonic antisense oligonucleotide 3 (1day),1,86M,2 +2430,SRR9602774,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Atxn10 intronic antisense oligonucleotide 1 (1day),1,71M,2 +2431,SRR9602775,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Atxn10 exonic antisense oligonucleotide 1 (1day),1,75M,1 +2432,SRR9602776,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),control antisense oligonucleotide (1day),1,80M,2 +2433,SRR9825093,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),1,53M,4 +2434,SRR9825094,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),2,53M,4 +2435,SRR9825095,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),nan,1,92M,4 +2436,SRR9825096,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),nan,2,45M,4 +2437,SRR9825097,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),1,73M,4 +2438,SRR9825098,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),2,44M,4 +2439,SRR9825099,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),1,53M,4 +2440,SRR9825100,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),2,57M,4 +2441,SRR9825101,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),nan,1,52M,4 +2442,SRR9825102,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),nan,2,46M,4 +2443,SRR9833430,Wan2020h2bg53d,H. sapiens,PRO-seq,S2VP10 (cell line),nan,1,29M,1 +2444,SRR9833433,Wan2020h2bg53d,H. sapiens,PRO-seq,S2VP10 (cell line),nan,2,30M,2 +2445,SRR988329,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),nan,1,8M,4 +2446,SRR988330,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),nan,2,5M,5 +2447,SRR988331,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),nan,3,8M,4 +2448,SRR988332,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),nan,4,7M,4 +2449,SRR988333,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),nan,5,5M,5 +2450,SRR988334,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),nan,1,4M,5 +2451,SRR988335,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),nan,2,6M,5 +2452,SRR988336,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),nan,3,5M,5 +2453,SRR988337,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),nan,4,4M,5 +2454,SRR988338,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),1,8M,4 +2455,SRR988339,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),2,8M,4 +2456,SRR988340,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),3,6M,5 +2457,SRR988341,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),1,10M,4 +2458,SRR988342,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),2,3M,5 +2459,SRR988343,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (12hr),1,8M,4 +2460,SRR988344,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (12hr),2,5M,5 +2461,SRR988345,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (12hr),1,10M,4 +2462,SRR988346,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (12hr),2,3M,5 +2463,SRR9961457,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),nan,3,20M,4 +2464,SRR9961458,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),nan,1,32M,1 +2465,SRR9961459,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),nan,2,30M,2 +2466,SRR9961460,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),nan,3,28M,2 +2467,SRR9961461,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",3,18M,2 +2468,SRR9961462,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",4,15M,3 +2469,SRZ014283,Core2008nascent,H. sapiens,GRO-seq,IMR90 (cell line),nan,1,11M,4 +2470,SRZ014286,Core2008nascent,H. sapiens,GRO-seq,IMR90 (cell line),nan,2,9M,4 +2471,SRZ064988,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),nan,1,18M,3 +2472,SRZ064990,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),nan,1,17M,3 +2473,SRZ064992,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),nan,1,17M,3 +2474,SRZ064995,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),nan,1,5M,5 +2475,SRZ073008,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),nan,1,20M,3 +2476,SRZ073011,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),dsRNA EGFP (6day),1,81M,3 +2477,SRZ073015,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),dsRNA EGFP (6day),2,33M,3 +2478,SRZ073017,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Msl2 (6day),1,79M,3 +2479,SRZ073021,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Msl2 (6day),2,34M,3 +2480,SRZ097854,Min2011regulating,M. musculus,GRO-seq,ESC (cell line),nan,1,4M,5 +2481,SRZ097858,Min2011regulating,M. musculus,GRO-seq,ESC (cell line),nan,2,4M,5 +2482,SRZ10004434,Bahat2019targeting,H. sapiens,GRO-seq,HeLa (cell line),DMSO (90min),1,141M,2 +2483,SRZ10004438,Bahat2019targeting,H. sapiens,GRO-seq,HeLa (cell line),DMSO (90min),2,124M,2 +2484,SRZ10004442,Bahat2019targeting,H. sapiens,GRO-seq,HeLa (cell line),Spt5-Pol II small-molecule inhibitor 21 (90min),1,138M,2 +2485,SRZ10354600,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (1hr),1,108M,2 +2486,SRZ10354602,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (1hr),2,109M,2 +2487,SRZ10354604,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (1hr),1,104M,3 +2488,SRZ10354606,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (1hr),2,117M,2 +2489,SRZ10354608,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (2hr),1,77M,1 +2490,SRZ10354610,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (2hr),2,80M,1 +2491,SRZ10354612,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (2hr),1,75M,2 +2492,SRZ10354614,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (2hr),2,82M,2 +2493,SRZ10354616,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),NVP2 (30min),1,92M,3 +2494,SRZ10354618,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),NVP2 (30min),2,97M,3 +2495,SRZ10354620,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),"NVP2 (30min) , dTAG7 (2hr)",1,85M,3 +2496,SRZ10354622,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),"NVP2 (30min) , dTAG7 (2hr)",2,74M,3 +2497,SRZ10354637,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"DMSO (1hr) , 4-thiouridine (5min)",1,99M,1 +2498,SRZ10354639,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"DMSO (1hr) , 4-thiouridine (5min)",2,110M,1 +2499,SRZ10354641,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (1hr)",1,102M,1 +2500,SRZ10354643,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (1hr)",2,117M,1 +2501,SRZ10354645,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , DMSO (2hr)",1,107M,1 +2502,SRZ10354647,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , DMSO (2hr)",2,113M,1 +2503,SRZ10354649,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (2hr)",1,106M,1 +2504,SRZ10354651,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (2hr)",2,111M,1 +2505,SRZ10466082,Wang2020increased,H. sapiens,GRO-seq,NSPC (primary),nan,1,55M,1 +2506,SRZ10466084,Wang2020increased,H. sapiens,GRO-seq,NSPC (primary),nan,2,53M,1 +2507,SRZ11607565,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Nurf301 (5day),1,56M,3 +2508,SRZ11607568,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Bap170 (5day) , dsRNA Nurf301 (5day)",1,42M,3 +2509,SRZ11607571,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),1,38M,3 +2510,SRZ11607574,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Gaf (5day),1,46M,3 +2511,SRZ11607577,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Bap170 (5day),1,37M,3 +2512,SRZ12179472,Zhu2021calcium,M. musculus,GRO-seq,ECOMG (cell line),neutrophil differentiation protocol,1,38M,3 +2513,SRZ12179474,Zhu2021calcium,M. musculus,GRO-seq,ECOMG (cell line),"A23187 (4hr) , neutrophil differentiation protocol",1,32M,4 +2514,SRZ1482436,Williams2015pausing,M. musculus,GRO-seq,ESC (cell line),nan,1,87M,2 +2515,SRZ1482441,Williams2015pausing,M. musculus,GRO-seq,ESC (cell line),nan,2,68M,2 +2516,SRZ1554311,Core2014analysis,H. sapiens,PRO-seq,K562 (cell line),nan,1,447M,3 +2517,SRZ1575914,Mayer2015native,H. sapiens,NET-seq,HeLa S3 (cell line),nan,2,399M,4 +2518,SRZ1575919,Mayer2015native,H. sapiens,NET-seq,HeLa S3 (cell line),nan,1,131M,4 +2519,SRZ1575923,Mayer2015native,H. sapiens,NET-seq,HEK293T (cell line),nan,2,691M,4 +2520,SRZ1575929,Mayer2015native,H. sapiens,NET-seq,HeLa S3 (cell line),DMSO (1hr),1,261M,4 +2521,SRZ1575932,Mayer2015native,H. sapiens,NET-seq,HeLa S3 (cell line),flavopiridol (1hr),1,291M,4 +2522,SRZ1648896,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),3,44M,2 +2523,SRZ1648898,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),3,63M,3 +2524,SRZ1693609,Duttke2015human,H. sapiens,GRO-cap,HeLa (cell line),nan,1,66M,4 +2525,SRZ1693611,Duttke2015human,H. sapiens,GRO-seq,HeLa (cell line),nan,1,68M,4 +2526,SRZ1744498,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),nan,1,42M,3 +2527,SRZ1744500,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,28M,4 +2528,SRZ1744502,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,46M,4 +2529,SRZ1744504,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,42M,3 +2530,SRZ1744506,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,69M,3 +2531,SRZ1744508,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),nan,1,43M,3 +2532,SRZ1744510,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,21M,4 +2533,SRZ1744512,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,38M,3 +2534,SRZ1744514,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,45M,3 +2535,SRZ1744516,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,35M,3 +2536,SRZ1745515,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),nan,1,36M,2 +2537,SRZ1745517,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),Wnt3a (6hr),1,45M,2 +2538,SRZ1745519,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),"Wnt3a (6hr) , activin A (6hr)",1,31M,2 +2539,SRZ1745521,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),activin A (6hr),1,42M,2 +2540,SRZ1745523,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),nan,1,51M,2 +2541,SRZ1745525,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),"Wnt3a (6hr) , activin A (6hr)",1,44M,2 +2542,SRZ1745527,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),nan,1,46M,2 +2543,SRZ1745529,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),"Wnt3a (6hr) , activin A (6hr)",1,43M,2 +2544,SRZ1810067,Danko2015identification,H. sapiens,PRO-seq,CD4+ T cell (primary),DMSO/ethanol (30min),1,86M,3 +2545,SRZ1810071,Danko2015identification,H. sapiens,PRO-seq,Jurkat T cell (cell line),DMSO/ethanol (30min),1,58M,2 +2546,SRZ1928221,Mayer2015native,H. sapiens,NET-seq,HEK293T (cell line),nan,1,8M,5 +2547,SRZ1950491,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),1,37M,2 +2548,SRZ1950493,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),2,35M,2 +2549,SRZ1950495,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),nan,1,26M,2 +2550,SRZ1950497,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),nan,2,34M,3 +2551,SRZ1950499,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (4hr),1,37M,2 +2552,SRZ1950501,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (4hr),2,33M,2 +2553,SRZ1950503,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (12hr),1,36M,2 +2554,SRZ1950505,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (12hr),2,39M,2 +2555,SRZ1950507,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),1,37M,2 +2556,SRZ1950509,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),2,35M,2 +2557,SRZ1950511,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),1,32M,2 +2558,SRZ1950513,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),2,26M,2 +2559,SRZ1951428,Heinaniemi2016transcription,H. sapiens,GRO-seq,REH (cell line),nan,1,40M,1 +2560,SRZ1951430,Heinaniemi2016transcription,H. sapiens,GRO-seq,REH (cell line),nan,2,36M,2 +2561,SRZ1951433,Heinaniemi2016transcription,H. sapiens,GRO-seq,REH (cell line),stromal cell co-culture (1day),1,20M,1 +2562,SRZ2084576,Chen2015paf1,H. sapiens,GRO-seq,HCT116 (cell line),nan,1,49M,2 +2563,SRZ2084580,Chen2015paf1,H. sapiens,GRO-seq,HCT116 (cell line),nan,2,81M,1 +2564,SRZ2084584,Chen2015paf1,H. sapiens,GRO-seq,HCT116 (cell line),nan,1,63M,3 +2565,SRZ2084588,Chen2015paf1,H. sapiens,GRO-seq,HCT116 (cell line),nan,2,107M,2 +2566,SRZ2820481,Wei2016long,M. musculus,GRO-seq,NSPC (primary),nan,1,62M,1 +2567,SRZ2820483,Wei2016long,M. musculus,GRO-seq,NSPC (primary),nan,2,71M,1 +2568,SRZ2820485,Wei2016long,M. musculus,GRO-seq,NSPC (primary),nan,3,91M,3 +2569,SRZ2820487,Wei2016long,M. musculus,GRO-seq,NSPC (primary),nan,1,49M,2 +2570,SRZ2820489,Wei2016long,M. musculus,GRO-seq,NSPC (primary),nan,2,114M,2 +2571,SRZ2820491,Wei2016long,M. musculus,GRO-seq,NSPC (primary),nan,3,63M,2 +2572,SRZ2960994,Magnuson2015identifying,H. sapiens,other,K562 (cell line),bromouridine (30min),1,89M,3 +2573,SRZ2960996,Magnuson2015identifying,H. sapiens,other,K562 (cell line),bromouridine (30min),1,92M,4 +2574,SRZ2960998,Magnuson2015identifying,H. sapiens,other,K562 (cell line),"bromouridine (30min) , ultraviolet C (25s)",1,86M,4 +2575,SRZ2961000,Magnuson2015identifying,H. sapiens,other,K562 (cell line),"bromouridine (30min) , ultraviolet C (100s)",1,85M,4 +2576,SRZ2961002,Magnuson2015identifying,H. sapiens,other,HF1 (cell line),bromouridine (30min),1,61M,2 +2577,SRZ2961004,Magnuson2015identifying,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",1,58M,4 +2578,SRZ2961006,Magnuson2015identifying,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s) , TNF-alpha (1hr)",1,53M,4 +2579,SRZ2961008,Magnuson2015identifying,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",2,49M,3 +2580,SRZ2961012,Magnuson2015identifying,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",3,57M,3 +2581,SRZ3031836,Booth2016divergence,S. cerevisiae,PRO-seq,whole yeast (organism),nan,1,20M,4 +2582,SRZ3031838,Booth2016divergence,S. cerevisiae,PRO-seq,whole yeast (organism),nan,1,23M,4 +2583,SRZ3031840,Booth2016divergence,S. pombe,PRO-seq,whole yeast (organism),nan,1,25M,3 +2584,SRZ3031842,Booth2016divergence,S. pombe,PRO-seq,whole yeast (organism),nan,1,33M,4 +2585,SRZ3031844,Booth2016divergence,S. cerevisiae,PRO-cap,whole yeast (organism),nan,1,23M,5 +2586,SRZ3031846,Booth2016divergence,S. pombe,PRO-cap,whole yeast (organism),nan,1,50M,4 +2587,SRZ3223688,Jager2016nuclear,M. musculus,GRO-seq,brown adipose tissue (tissue),nan,1,148M,2 +2588,SRZ3223690,Jager2016nuclear,M. musculus,GRO-seq,brown adipose tissue (tissue),nan,1,334M,3 +2589,SRZ3223692,Jager2016nuclear,M. musculus,GRO-seq,epididymal white adipose tissue (tissue),nan,1,141M,2 +2590,SRZ3223694,Jager2016nuclear,M. musculus,GRO-seq,epididymal white adipose tissue (tissue),nan,1,183M,2 +2591,SRZ3223696,Jager2016nuclear,M. musculus,GRO-seq,inguinal white adipose tissue (tissue),nan,1,118M,2 +2592,SRZ3223698,Jager2016nuclear,M. musculus,GRO-seq,inguinal white adipose tissue (tissue),nan,1,211M,2 +2593,SRZ3477284,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (healthy) (tissue),nan,1,22M,4 +2594,SRZ3477286,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (healthy) (tissue),nan,2,13M,4 +2595,SRZ3477288,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (healthy) (tissue),nan,3,21M,4 +2596,SRZ3477290,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (borderline ischemic) (tissue),nan,1,16M,4 +2597,SRZ3477292,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (borderline ischemic) (tissue),nan,2,27M,4 +2598,SRZ3477294,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (borderline ischemic) (tissue),nan,3,10M,4 +2599,SRZ3477296,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (ischemic) (tissue),nan,1,23M,4 +2600,SRZ3477298,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (ischemic) (tissue),nan,2,15M,5 +2601,SRZ3477300,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (ischemic) (tissue),nan,3,11M,5 +2602,SRZ354085,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),nan,1,20M,5 +2603,SRZ354088,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),nan,2,18M,5 +2604,SRZ354090,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),nan,3,24M,5 +2605,SRZ354095,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),heat shock (20min),1,6M,5 +2606,SRZ354098,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),heat shock (20min),2,7M,5 +2607,SRZ354100,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),heat shock (20min),3,5M,5 +2608,SRZ3734610,Emmett2017histone,M. musculus,GRO-seq,brown adipose tissue (tissue),thermoneutrality (14day),1,242M,3 +2609,SRZ3734612,Emmett2017histone,M. musculus,GRO-seq,brown adipose tissue (tissue),thermoneutrality (14day),1,232M,4 +2610,SRZ3734614,Emmett2017histone,M. musculus,GRO-seq,brown adipose tissue (tissue),nan,1,276M,2 +2611,SRZ3734617,Emmett2017histone,M. musculus,GRO-seq,brown adipose tissue (tissue),nan,1,243M,3 +2612,SRZ4012390,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",1,39M,2 +2613,SRZ4012394,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",2,78M,3 +2614,SRZ4012396,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",2,39M,3 +2615,SRZ4012400,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",3,16M,3 +2616,SRZ4012402,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",3,4M,5 +2617,SRZ4012404,Danko2018dynamic,P. troglodytes,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",1,49M,3 +2618,SRZ4012406,Danko2018dynamic,P. troglodytes,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",1,54M,3 +2619,SRZ4012408,Danko2018dynamic,P. troglodytes,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",2,47M,1 +2620,SRZ4012410,Danko2018dynamic,P. troglodytes,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",2,38M,2 +2621,SRZ4012415,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",4,10M,4 +2622,SRZ4012417,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",1,68M,3 +2623,SRZ4012420,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",1,58M,4 +2624,SRZ4012423,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",2,63M,2 +2625,SRZ4012426,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",2,55M,3 +2626,SRZ497904,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),DMSO,1,10M,4 +2627,SRZ497907,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),DMSO,2,17M,3 +2628,SRZ497912,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),2,21M,2 +2629,SRZ497914,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,13M,3 +2630,SRZ497917,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,14M,3 +2631,SRZ497922,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (160min),2,20M,2 +2632,SRZ5109941,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,ESC (cell line),nan,1,27M,1 +2633,SRZ5195540,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),nan,1,77M,2 +2634,SRZ5195542,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),nan,2,85M,2 +2635,SRZ5195544,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),nan,1,110M,2 +2636,SRZ5195546,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),nan,2,106M,1 +2637,SRZ5251072,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,HUVEC (primary),nan,1,21M,3 +2638,SRZ5251074,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,HUVEC (primary),VEGF-A (2hr),1,29M,3 +2639,SRZ5298779,Incarnato2017vivo,E. coli,other,whole bacteria (organism),nan,1,114M,4 +2640,SRZ5298783,Incarnato2017vivo,E. coli,other,whole bacteria (organism),nan,1,210M,4 +2641,SRZ5298787,Incarnato2017vivo,E. coli,other,whole bacteria (organism),nan,2,233M,4 +2642,SRZ5364052,Franco2018enhancer,H. sapiens,GRO-seq,76NF2V (cell line),nan,1,55M,3 +2643,SRZ5364053,Franco2018enhancer,H. sapiens,GRO-seq,76NF2V (cell line),nan,2,53M,3 +2644,SRZ5364056,Franco2018enhancer,H. sapiens,GRO-seq,MCF10A (cell line),nan,1,49M,4 +2645,SRZ5364057,Franco2018enhancer,H. sapiens,GRO-seq,MCF10A (cell line),nan,2,51M,4 +2646,SRZ5364060,Franco2018enhancer,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,79M,2 +2647,SRZ5364063,Franco2018enhancer,H. sapiens,GRO-seq,ZR751 (cell line),nan,1,57M,1 +2648,SRZ5364064,Franco2018enhancer,H. sapiens,GRO-seq,ZR751 (cell line),nan,2,50M,1 +2649,SRZ5364067,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-361 (cell line),nan,1,64M,1 +2650,SRZ5364068,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-361 (cell line),nan,2,56M,1 +2651,SRZ5364071,Franco2018enhancer,H. sapiens,GRO-seq,UACC812 (cell line),nan,1,50M,3 +2652,SRZ5364074,Franco2018enhancer,H. sapiens,GRO-seq,SKBR3 (cell line),nan,1,63M,3 +2653,SRZ5364075,Franco2018enhancer,H. sapiens,GRO-seq,SKBR3 (cell line),nan,2,62M,2 +2654,SRZ5364078,Franco2018enhancer,H. sapiens,GRO-seq,AU565 (cell line),nan,1,65M,3 +2655,SRZ5364079,Franco2018enhancer,H. sapiens,GRO-seq,AU565 (cell line),nan,2,61M,3 +2656,SRZ5364082,Franco2018enhancer,H. sapiens,GRO-seq,HCC1954 (cell line),nan,1,62M,3 +2657,SRZ5364083,Franco2018enhancer,H. sapiens,GRO-seq,HCC1954 (cell line),nan,2,59M,3 +2658,SRZ5364086,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-468 (cell line),nan,1,50M,2 +2659,SRZ5364087,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-468 (cell line),nan,2,56M,2 +2660,SRZ5364090,Franco2018enhancer,H. sapiens,GRO-seq,HCC1937 (cell line),nan,1,62M,2 +2661,SRZ5364091,Franco2018enhancer,H. sapiens,GRO-seq,HCC1937 (cell line),nan,2,57M,2 +2662,SRZ5364094,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-231 (cell line),nan,1,72M,2 +2663,SRZ5364095,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-231 (cell line),nan,2,80M,2 +2664,SRZ5364098,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-436 (cell line),nan,1,54M,1 +2665,SRZ5364099,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-436 (cell line),nan,2,68M,2 +2666,SRZ543417,Lin2012global,M. musculus,GRO-seq,pre pro B cell (primary),nan,1,65M,2 +2667,SRZ543419,Lin2012global,M. musculus,GRO-seq,pro B cell (primary),nan,1,88M,3 +2668,SRZ544876,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),nan,1,24M,2 +2669,SRZ579299,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),nan,1,41M,1 +2670,SRZ579310,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),nan,2,27M,3 +2671,SRZ579319,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),nan,3,13M,4 +2672,SRZ579324,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),1,46M,1 +2673,SRZ579335,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),2,24M,2 +2674,SRZ579342,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),3,10M,3 +2675,SRZ579347,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (25min),1,19M,2 +2676,SRZ579353,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (25min),2,23M,1 +2677,SRZ579360,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,15M,3 +2678,SRZ579364,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,21M,1 +2679,SRZ579370,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),3,32M,3 +2680,SRZ5861742,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),DMSO,1,10M,4 +2681,SRZ5861744,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),DMSO,2,9M,4 +2682,SRZ5861746,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),DMSO,3,8M,4 +2683,SRZ5861748,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,8M,4 +2684,SRZ5861750,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,8M,4 +2685,SRZ5861752,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,11M,3 +2686,SRZ5861754,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,10M,4 +2687,SRZ5861756,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,10M,4 +2688,SRZ5861758,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,11M,3 +2689,SRZ5861760,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,9M,4 +2690,SRZ5861762,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,10M,3 +2691,SRZ5861764,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,11M,3 +2692,SRZ5861766,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,11M,3 +2693,SRZ5861768,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,10M,4 +2694,SRZ5861770,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,9M,4 +2695,SRZ5861772,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,11M,3 +2696,SRZ5861774,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,9M,4 +2697,SRZ5861776,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,10M,3 +2698,SRZ5861778,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,9M,4 +2699,SRZ5861780,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,11M,3 +2700,SRZ5861782,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,12M,3 +2701,SRZ5861784,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,11M,3 +2702,SRZ5861786,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,10M,4 +2703,SRZ5861788,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,12M,3 +2704,SRZ5861790,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,12M,3 +2705,SRZ5861792,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,10M,4 +2706,SRZ5861794,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,10M,3 +2707,SRZ5861796,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,10M,3 +2708,SRZ5861798,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,12M,3 +2709,SRZ5861800,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,11M,3 +2710,SRZ5944049,Rahnamoun2017mutant,H. sapiens,GRO-seq,SW480 (cell line),TNF-alpha (16hr),1,26M,1 +2711,SRZ5944050,Rahnamoun2017mutant,H. sapiens,GRO-seq,SW480 (cell line),TNF-alpha (16hr),2,30M,1 +2712,SRZ5944950,Gao2017thyroid,H. sapiens,GRO-seq,CD34+ erythroblast (primary),DMSO (6hr),1,73M,4 +2713,SRZ5944951,Gao2017thyroid,H. sapiens,GRO-seq,CD34+ erythroblast (primary),GC-1 (6hr),2,51M,4 +2714,SRZ611824,Kwak2013precise,D. melanogaster,PRO-seq,S2 (cell line),nan,1,48M,3 +2715,SRZ611829,Kwak2013precise,D. melanogaster,PRO-cap,S2 (cell line),nan,1,44M,4 +2716,SRZ6290499,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),1,50M,1 +2717,SRZ6290503,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),1,37M,1 +2718,SRZ6290507,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),2,35M,1 +2719,SRZ6290511,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),2,35M,1 +2720,SRZ6290515,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),3,30M,1 +2721,SRZ6290519,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),3,44M,1 +2722,SRZ6290523,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),4,40M,1 +2723,SRZ6290527,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),4,36M,1 +2724,SRZ6290531,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),1,36M,1 +2725,SRZ6290535,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),1,28M,1 +2726,SRZ6290539,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),2,38M,1 +2727,SRZ6290543,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),2,40M,1 +2728,SRZ6290547,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),3,37M,1 +2729,SRZ6290551,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),3,39M,1 +2730,SRZ6290555,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),4,35M,1 +2731,SRZ6290559,Rao2017cohesin,H. 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(cell line),bromouridine (30min),1,59M,1 +2840,SRZ929974,Veloso2013genome-wide,H. sapiens,other,HF1 (cell line),bromouridine (30min),2,50M,1 +2841,SRZ929981,Veloso2013genome-wide,H. sapiens,other,skin fibroblast (primary),bromouridine (30min),1,68M,2 +2842,SRZ930649,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),1,35M,1 +2843,SRZ930653,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),1,7M,4 +2844,SRZ930655,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),1,12M,3 +2845,SRZ930657,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),1,6M,4 +2846,SRZ930659,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , serum starvation (15hr)",1,36M,2 +2847,SRZ930663,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A 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