fix: Clean blank column out

With nushell
open all_samples.csv | reject "" | save all_samples.csv -f
open datasets.csv | reject "" | save datasets.csv -f

Didn't need to do it with the parquets apparently.

datasets.csv

@@ -1,289 +1,289 @@
-,Paper identifier,Protocols,Organisms,Published?,Median QC score,ATAC-seq,RNA-seq,ChIP-seq,3D seq,Other seq
-1,Aeby2020decapping,PRO-seq,M. musculus,Yes,1.0,No,Yes,No,No,No
-2,Agarwal2021kdm1a,"other, GRO-seq",M. musculus,Yes,1.0,No,Yes,Yes,No,No
-3,Aho2019displacement,PRO-seq,H. sapiens,Yes,1.0,No,Yes,Yes,No,No
-4,Akulenko2018transcriptional,GRO-seq,D. melanogaster,Yes,3.0,No,No,No,No,Yes
-5,Alexander2019imprinted,PRO-seq,M. musculus,No,2.0,No,No,No,No,No
-6,Alhusini2017genomewide,GRO-seq,S. cerevisiae,Yes,4.5,No,No,No,No,No
-7,Allen2014global,GRO-seq,H. sapiens,Yes,3.0,No,No,No,No,Yes
-8,Anderson2020defining,PRO-seq,M. musculus,Yes,3.0,No,No,No,No,No
-9,Andersson2014nuclear,GRO-seq,H. sapiens,Yes,1.0,No,No,No,No,Yes
-10,Andrade2015dna,other,H. sapiens,Yes,2.5,No,No,No,No,No
-11,Andrysik2017identification,GRO-seq,H. sapiens,Yes,1.0,No,Yes,Yes,No,Yes
-12,Aoi2020nelf,"PRO-seq, PRO-cap",H. sapiens,Yes,2.0,No,No,Yes,No,No
-13,Aprile-garcia2019nascent,PRO-seq,H. sapiens,Yes,2.5,No,No,Yes,No,No
-14,Ba2020ctcf,GRO-seq,M. musculus,Yes,1.0,No,No,Yes,Yes,Yes
-15,Bahat2019targeting,GRO-seq,H. sapiens,Yes,2.0,No,Yes,No,No,Yes
-16,Barbieri2020rapid,other,H. sapiens,Yes,4.0,No,Yes,No,No,No
-17,Barucci2020small,PRO-seq,C. elegans,Yes,3.0,No,Yes,No,No,Yes
-18,Beckedorff2020human,PRO-seq,H. sapiens,Yes,1.0,Yes,Yes,Yes,No,Yes
-19,Bi2020enhancer,GRO-seq,H. sapiens,Yes,2.0,Yes,Yes,Yes,No,No
-20,Birkenheuer2018herpes,GRO-seq,H. sapiens,Yes,1.0,No,Yes,No,No,No
-21,Birkenheuer2020rna,PRO-seq,H. sapiens,Yes,1.0,No,No,No,No,No
-22,Blumberg2021characterizing,PRO-seq,H. sapiens,Yes,1.0,No,Yes,No,No,No
-23,Boija2017cbp,PRO-seq,D. melanogaster,Yes,3.5,No,No,Yes,No,Yes
-24,Bonelt2019precocious,GRO-seq,M. musculus,Yes,2.0,Yes,Yes,Yes,No,No
-25,Booth2016divergence,"PRO-cap, PRO-seq","S. cerevisiae, S. pombe",Yes,4.0,No,Yes,No,No,No
-26,Booth2018cdk9,PRO-seq,S. pombe,Yes,4.0,No,No,No,No,No
-27,Bouvyliivrand2017analysis,GRO-seq,H. sapiens,Yes,2.0,No,No,No,No,No
-28,Boxer2020mecp2,PRO-seq,M. musculus,Yes,2.0,No,Yes,Yes,Yes,Yes
-29,Busslinger2017cohesin,GRO-seq,M. musculus,Yes,4.0,No,Yes,Yes,No,No
-30,Cardamone2018mitochondrial,GRO-seq,M. musculus,Yes,3.5,No,Yes,Yes,No,No
-31,Cecere2013zfp1,GRO-seq,C. elegans,Yes,4.0,No,No,No,No,No
-32,Cecere2014global,GRO-seq,C. elegans,Yes,4.0,No,No,No,No,No
-33,Chen2014gene,GRO-seq,H. sapiens,Yes,3.0,No,No,Yes,No,No
-34,Chen2015paf1,"other, GRO-seq",H. sapiens,Yes,2.0,No,Yes,Yes,No,No
-35,Chen2016cutoff,GRO-seq,D. melanogaster,Yes,5.0,No,Yes,Yes,No,No
-36,Chen2017rchip,GRO-seq,H. sapiens,Yes,4.0,No,No,Yes,No,No
-37,Chen2018augmented,GRO-seq,H. sapiens,Yes,3.0,No,No,Yes,No,No
-38,Chen2018rna,GRO-seq,M. musculus,Yes,4.5,No,No,No,No,Yes
-39,Chivu2020unpublished,ChRO-seq,"H. sapiens, E. caballus",No,0.0,Yes,No,Yes,No,Yes
-40,Chu2018chromatin,"ChRO-seq, other, PRO-seq",H. sapiens,Yes,1.0,No,No,No,No,No
-41,Compagno2017phosphatidylinositol,GRO-seq,M. musculus,Yes,1.5,No,No,No,No,Yes
-42,Core2008nascent,GRO-seq,H. sapiens,Yes,4.0,No,No,No,No,No
-43,Core2012defining,GRO-seq,D. melanogaster,Yes,3.0,No,No,Yes,No,No
-44,Core2014analysis,"GRO-cap, GRO-seq, PRO-seq",H. sapiens,Yes,3.5,No,No,No,No,No
-45,Cosby2021recurrent,PRO-seq,M. velifer,Yes,4.0,No,No,Yes,No,No
-46,Cuartero2020control,GRO-seq,M. musculus,Yes,3.0,Yes,Yes,Yes,Yes,No
-47,Czimmerer2018transcription,GRO-seq,M. musculus,Yes,4.0,Yes,Yes,Yes,No,No
-48,Dai2020loop,GRO-seq,M. musculus,Yes,1.0,No,No,Yes,Yes,Yes
-49,Daniel2018nuclear,GRO-seq,M. musculus,Yes,3.0,Yes,Yes,Yes,No,No
-50,Danko2013signaling,GRO-seq,H. sapiens,Yes,2.0,No,No,No,No,No
-51,Danko2015identification,PRO-seq,H. sapiens,Yes,3.0,No,No,No,No,No
-52,Danko2018dynamic,PRO-seq,"H. sapiens, M. mulatta, M. musculus, P. troglodytes, R. norvegicus",Yes,3.0,No,No,No,No,No
-53,Delgado-benito2018chromatin,GRO-seq,M. musculus,Yes,3.0,No,Yes,Yes,No,No
-54,Dorighi2017mll3,GRO-seq,M. musculus,Yes,4.0,Yes,Yes,Yes,No,Yes
-55,Douillet2020uncoupling,PRO-seq,M. musculus,Yes,1.0,No,Yes,Yes,No,Yes
-56,Duarte2016transcription,PRO-seq,D. melanogaster,Yes,3.0,No,Yes,No,No,No
-57,Dukler2017nascent,PRO-seq,H. sapiens,Yes,1.0,No,No,No,No,No
-58,Duttke2015human,"GRO-seq, GRO-cap",H. sapiens,Yes,4.0,No,No,No,No,No
-59,Duttke2017unpublished,"GRO-seq, GRO-cap",D. melanogaster,No,3.5,No,No,No,No,No
-60,Elkon2015myc,GRO-seq,H. sapiens,Yes,3.0,No,Yes,No,No,Yes
-61,Elrod2019integrator,PRO-seq,D. melanogaster,Yes,3.0,Yes,Yes,Yes,No,No
-62,Emmett2017histone,GRO-seq,M. musculus,Yes,3.0,No,Yes,Yes,No,No
-63,Engreitz2016local,PRO-seq,M. musculus,Yes,2.0,Yes,Yes,Yes,No,No
-64,Erhard2015nascent,GRO-seq,Z. mays,Yes,2.0,No,No,No,No,No
-65,Escoubet-lozach2011mechanisms,GRO-seq,M. musculus,Yes,4.0,No,Yes,Yes,No,No
-66,Esousa2019kinetics,PRO-seq,M. musculus,Yes,1.0,No,Yes,No,No,No
-67,Estaras2015smad,GRO-seq,H. sapiens,Yes,2.0,No,No,Yes,No,No
-68,Etchegaray2019histone,PRO-seq,M. musculus,Yes,1.0,No,No,Yes,No,Yes
-69,Fan2020drb,"PRO-seq, other",H. sapiens,Yes,1.0,No,Yes,Yes,No,Yes
-70,Fang2014circadian,GRO-seq,M. musculus,Yes,1.5,No,No,Yes,No,Yes
-71,Fant2020tfiid,PRO-seq,"D. melanogaster, H. sapiens",Yes,3.5,No,No,No,No,No
-72,Fei2018ndf,GRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,No,No
-73,Fleischer2017dna,GRO-seq,H. sapiens,Yes,3.5,No,No,No,No,Yes
-74,Flynn20167skbaf,GRO-seq,M. musculus,Yes,2.0,Yes,No,Yes,No,Yes
-75,Fong2014pre,GRO-seq,H. sapiens,Yes,5.0,No,Yes,No,No,No
-76,Fong2017rna,NET-seq,H. sapiens,Yes,2.5,No,No,Yes,No,No
-77,Fonseca2019diverse,GRO-seq,M. musculus,Yes,3.5,No,Yes,Yes,No,No
-78,Franco2015tnfalpha,GRO-seq,H. sapiens,Yes,1.0,No,No,Yes,No,No
-79,Franco2018enhancer,GRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,No,No
-80,Fuda2012fcp1,GRO-seq,D. melanogaster,Yes,4.5,No,No,No,No,No
-81,Fuda2015gaga,GRO-seq,D. melanogaster,Yes,5.0,No,No,Yes,No,Yes
-82,Galbraith2013hif1a,GRO-seq,H. sapiens,Yes,4.0,No,No,Yes,No,Yes
-83,Gally2020gain,PRO-seq,H. sapiens,Yes,2.0,Yes,No,No,No,Yes
-84,Gao2017thyroid,GRO-seq,H. sapiens,Yes,4.0,No,Yes,Yes,No,No
-85,Gao2018jmjd6,GRO-seq,H. sapiens,Yes,3.0,No,Yes,Yes,No,No
-86,Gardini2014integrator,GRO-seq,H. sapiens,Yes,3.0,No,Yes,Yes,No,No
-87,Gibson2016chemical,GRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,No,Yes
-88,Godfrey2017mll,other,H. sapiens,Yes,1.0,No,No,Yes,Yes,No
-89,Guan2018diet,GRO-seq,M. musculus,Yes,4.0,No,No,Yes,No,No
-90,Hah2011rapid,GRO-seq,H. sapiens,Yes,3.0,No,No,No,No,No
-91,Hah2013enhancer,GRO-seq,H. sapiens,Yes,2.0,No,No,No,No,No
-92,Hah2015inflammation,GRO-seq,M. musculus,Yes,1.5,No,No,No,No,No
-93,Harman2021invivo,GRO-seq,M. musculus,Yes,1.5,Yes,Yes,No,Yes,No
-94,Heinaniemi2016transcription,GRO-seq,H. sapiens,Yes,2.0,No,No,Yes,No,No
-95,Heinz2013effect,GRO-seq,M. musculus,Yes,2.0,No,No,Yes,No,Yes
-96,Herold2019recruitment,GRO-seq,H. sapiens,Yes,4.0,No,Yes,Yes,No,Yes
-97,Hetzel2016nascent,"GRO-seq, GRO-cap",A. thaliana,Yes,3.0,No,Yes,No,No,No
-98,Hong2017dissociation,GRO-seq,M. musculus,Yes,1.5,No,Yes,Yes,No,No
-99,Horibata2018erpositive,PRO-seq,H. sapiens,Yes,1.0,No,No,No,No,No
-100,Hou2019paf1c,PRO-seq,M. musculus,Yes,1.0,Yes,Yes,Yes,No,Yes
-101,Hu2012dicer,GRO-seq,H. sapiens,Yes,2.5,No,Yes,Yes,No,Yes
-102,Huang2020integrator,PRO-seq,D. melanogaster,Yes,3.0,No,Yes,Yes,No,No
-103,Ikegami2020phosphorylated,GRO-seq,H. sapiens,Yes,1.0,Yes,Yes,Yes,No,No
-104,Illingworth2016polycomb,GRO-seq,M. musculus,Yes,3.5,No,No,Yes,No,Yes
-105,Incarnato2017vivo,other,E. coli,Yes,4.0,No,Yes,No,No,Yes
-106,Jaeger2020selective,"PRO-seq, other",H. sapiens,Yes,1.0,No,Yes,Yes,Yes,Yes
-107,Jager2016nuclear,GRO-seq,M. musculus,Yes,2.0,No,No,Yes,No,Yes
-108,Ji2011transcriptional,GRO-seq,M. musculus,Yes,2.0,No,No,No,No,No
-109,Ji2013sr,GRO-seq,M. musculus,Yes,4.0,No,No,Yes,No,No
-110,Jiang2018multi,GRO-seq,H. sapiens,Yes,1.5,No,Yes,No,No,Yes
-111,Jin2013high,GRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,Yes,No
-112,Jin2014chem,GRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,No,No
-113,Johnson2017biotin,GRO-seq,M. musculus,Yes,2.0,No,Yes,No,No,No
-114,Johnston2020nascent,PRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,No,Yes
-115,Jones2023unpublished,PRO-seq,H. sapiens,No,3.0,No,No,No,No,No
-116,Jonkers2014genome,GRO-seq,M. musculus,Yes,2.0,No,No,No,No,No
-117,Judd2020unpublished,"other, PRO-seq",H. sapiens,No,3.5,No,No,No,No,No
-118,Judd2021pioneer,PRO-seq,D. melanogaster,Yes,3.0,Yes,Yes,Yes,No,Yes
-119,Kaikkonen2013remodeling,GRO-seq,M. musculus,Yes,3.0,No,No,Yes,No,No
-120,Kaikkonen2014control,GRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,Yes,No
-121,Kaikkonen2017genome,GRO-seq,S. scrofa,Yes,4.0,No,No,No,No,No
-122,Kantidakis2016mutation,GRO-seq,M. musculus,Yes,1.0,No,No,Yes,No,No
-123,Kelly2020unpublished,PRO-seq,M. musculus,No,2.0,No,No,No,No,Yes
-124,Khodor2011nascent,other,D. melanogaster,Yes,3.0,No,Yes,No,No,No
-125,Kim2018pluripotency,PRO-cap,M. musculus,Yes,4.5,Yes,Yes,Yes,No,Yes
-126,Kloetgen2020three,GRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,Yes,Yes
-127,Komarov2020epigenetic,GRO-seq,D. melanogaster,Yes,3.0,No,Yes,No,No,No
-128,Korkmaz2019crispr,GRO-seq,H. sapiens,Yes,1.0,No,Yes,Yes,No,No
-129,Kourtis2018oncogenic,GRO-seq,H. sapiens,Yes,3.0,No,Yes,Yes,No,Yes
-130,Kriaucionis2019unpublished,"PRO-seq, PRO-cap",H. sapiens,No,2.0,No,Yes,No,No,Yes
-131,Kristjansdottir2020population,"PRO-seq, PRO-cap",H. sapiens,Yes,4.0,No,No,No,No,No
-132,Kruesi2013condensin,"GRO-seq, GRO-cap",C. elegans,Yes,3.5,No,No,Yes,No,No
-133,Kuosmanen2018nrf2,GRO-seq,H. sapiens,Yes,2.5,No,Yes,No,No,Yes
-134,Kwak2013precise,"PRO-seq, PRO-cap",D. melanogaster,Yes,4.0,No,No,No,No,No
-135,Kwon2017locus,GRO-seq,M. musculus,Yes,3.0,No,Yes,Yes,No,No
-136,Lai2020directed,PRO-seq,M. musculus,Yes,1.0,No,Yes,No,No,No
-137,Laitem2015cdk9,GRO-seq,H. sapiens,Yes,3.0,No,No,No,No,No
-138,Lam2013rev,"GRO-cap, GRO-seq",M. musculus,Yes,3.5,No,No,Yes,No,No
-139,Larschan2011x,GRO-seq,D. melanogaster,Yes,3.0,No,No,No,No,No
-140,Le2013mapping,GRO-seq,H. sapiens,Yes,3.0,No,No,Yes,No,No
-141,Leroy2019ledgf,PRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,No,No
-142,Leveille2015genome,GRO-seq,H. sapiens,Yes,3.0,No,Yes,Yes,Yes,Yes
-143,Li2013functional,GRO-seq,H. sapiens,Yes,1.0,No,No,Yes,No,Yes
-144,Li2013ncor,GRO-seq,M. musculus,Yes,5.0,No,No,Yes,No,No
-145,Li2015condensin,GRO-seq,H. sapiens,Yes,2.0,No,No,Yes,No,No
-146,Li2017grid,GRO-seq,H. sapiens,Yes,4.0,No,No,No,No,Yes
-147,Li2018lncrna,GRO-seq,H. sapiens,Yes,3.0,No,Yes,No,No,Yes
-148,Li2020human,PRO-seq,H. sapiens,Yes,3.0,No,No,No,No,No
-149,Li2020signalosome,PRO-seq,R. norvegicus,Yes,4.0,No,No,Yes,No,No
-150,Li2021comprehensive,GRO-seq,H. sapiens,Yes,1.5,No,Yes,No,No,No
-151,Liang2018targeting,PRO-seq,H. sapiens,Yes,1.0,No,Yes,Yes,No,Yes
-152,Lin2012global,GRO-seq,M. musculus,Yes,2.5,No,No,Yes,Yes,No
-153,Link2018analysis,"GRO-seq, GRO-cap",M. musculus,Yes,3.0,Yes,Yes,Yes,Yes,Yes
-154,Linnakuosmanen2020nrf2,GRO-seq,H. sapiens,Yes,2.0,No,Yes,No,No,Yes
-155,Liu2013brd4,GRO-seq,H. sapiens,Yes,2.0,No,No,Yes,No,No
-156,Liu2014enhancer,GRO-seq,H. sapiens,Yes,2.0,No,No,Yes,No,No
-157,Liu2017dynamic,GRO-seq,H. sapiens,Yes,3.0,No,No,No,No,No
-158,Liu2017identification,PRO-seq,H. sapiens,Yes,2.0,No,No,No,No,No
-159,Liu2017transcriptional,GRO-seq,H. sapiens,Yes,1.0,No,Yes,Yes,No,Yes
-160,Liu2018arabidopsis,GRO-seq,A. thaliana,Yes,4.0,No,Yes,Yes,No,No
-161,Liu2018rna-directed,GRO-seq,A. thaliana,Yes,2.0,No,Yes,Yes,No,No
-162,Liu2020immediate,GRO-seq,A. thaliana,Yes,4.0,No,Yes,No,No,No
-163,Liu2021transcription,PRO-seq,H. sapiens,Yes,1.0,Yes,No,Yes,No,Yes
-164,Lloret-llinares2018rna,PRO-seq,M. musculus,Yes,1.0,No,Yes,No,No,Yes
-165,Lozano2018rna,PRO-seq,"Z. mays, M. esculenta",No,2.5,No,No,No,No,No
-166,Lu2017nascent,other,P. falciparum,Yes,4.0,No,No,Yes,No,No
-167,Luo2014dynamic,GRO-seq,H. sapiens,Yes,1.0,No,No,Yes,No,No
-168,Ma2020super,GRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,No,Yes
-169,Magnuson2015identifying,other,H. sapiens,Yes,3.0,No,No,No,No,No
-170,Mahat2016mammalian,PRO-seq,M. musculus,Yes,1.0,No,No,Yes,No,No
-171,Malinen2017crosstalk,GRO-seq,H. sapiens,Yes,2.0,No,No,Yes,No,No
-172,Marazzi2012suppression,GRO-seq,H. sapiens,Yes,3.0,No,Yes,Yes,No,No
-173,Mayer2015native,NET-seq,H. sapiens,Yes,4.0,No,Yes,No,No,No
-174,Mckinlay2011genome,PRO-seq,S. cerevisiae,Yes,5.0,No,Yes,No,No,No
-175,Meng2014convergent,GRO-seq,"M. musculus, H. sapiens",Yes,4.0,No,No,Yes,No,No
-176,Meyerswallen2017xx,ChRO-seq,C. lupus familiaris,Yes,3.0,No,Yes,No,No,Yes
-177,Miller2015senataxin,GRO-seq,H. sapiens,Yes,5.0,No,Yes,No,No,No
-178,Min2011regulating,GRO-seq,M. musculus,Yes,5.0,No,No,No,No,No
-179,Mohn2014rhino,GRO-seq,D. melanogaster,Yes,4.5,No,Yes,Yes,No,Yes
-180,Moreau2018transcriptional,GRO-seq,H. sapiens,Yes,2.0,No,Yes,No,No,No
-181,Mukai2020chromatin,ChRO-seq,C. lupus familiaris,Yes,4.0,No,No,No,No,No
-182,Murakami2017dynamic,GRO-seq,H. sapiens,Yes,3.0,No,No,Yes,No,No
-183,Nair2019phase,GRO-seq,"H. sapiens, M. musculus",Yes,1.0,Yes,No,Yes,Yes,No
-184,Nelson2018ppar,GRO-seq,M. musculus,Yes,2.0,No,Yes,Yes,No,No
-185,Ngoc2017human,GRO-seq,H. sapiens,Yes,3.0,No,No,No,No,No
-186,Nguyen2020dichotomous,GRO-seq,M. musculus,Yes,3.0,No,Yes,Yes,No,No
-187,Nilson2017oxidative,PRO-seq,H. sapiens,Yes,1.5,No,No,Yes,No,No
-188,Niskanen2015global,GRO-seq,H. sapiens,Yes,2.0,No,No,Yes,No,No
-189,Niskanen2018endothelial,GRO-seq,H. sapiens,Yes,2.0,No,No,Yes,No,Yes
-190,Nojima2015mammalian,"NET-seq, other",H. sapiens,Yes,2.0,No,Yes,No,No,No
-191,Oh2021enhancer,GRO-seq,H. sapiens,Yes,2.0,No,No,Yes,Yes,No
-192,Oittinen2017polycomb,GRO-seq,M. musculus,Yes,2.0,No,No,Yes,No,No
-193,Orioli2016human,other,H. sapiens,Yes,4.5,No,No,Yes,No,Yes
-194,Parida2019nucleotide,"PRO-seq, PRO-cap",H. sapiens,Yes,3.0,No,No,No,No,No
-195,Parikh2018critical,GRO-seq,D. melanogaster,Yes,3.0,No,Yes,No,No,Yes
-196,Park2020global,GRO-seq,H. sapiens,Yes,1.5,No,No,Yes,Yes,No
-197,Parua2018cdk9-pp1,PRO-seq,S. pombe,Yes,4.0,No,No,Yes,No,No
-198,Patel2020robust,PRO-seq,H. sapiens,Yes,2.0,No,Yes,No,No,Yes
-199,Perreault2019epigenetic,PRO-seq,H. sapiens,Yes,3.5,No,No,Yes,No,Yes
-200,Phanstiel2017static,PRO-seq,H. sapiens,Yes,4.0,Yes,Yes,Yes,Yes,No
-201,Puc2015ligand,"GRO-seq, PRO-cap",H. sapiens,Yes,2.5,No,No,Yes,No,No
-202,Rahnamoun2017mutant,GRO-seq,H. sapiens,Yes,1.0,No,Yes,Yes,No,No
-203,Rao2017cohesin,PRO-seq,H. sapiens,Yes,1.0,No,No,Yes,Yes,No
-204,Rozhkov2013multiple,GRO-seq,D. melanogaster,Yes,3.0,No,Yes,Yes,No,No
-205,Salony2016akt,GRO-seq,H. sapiens,Yes,5.0,No,Yes,No,No,Yes
-206,Santoriello2020rna,PRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,No,Yes
-207,Saponaro2014recql5,GRO-seq,H. sapiens,Yes,3.5,No,No,Yes,No,No
-208,Sasse2019nascent,GRO-seq,H. sapiens,Yes,4.0,No,No,Yes,No,No
-209,Sathyan2019improved,PRO-seq,H. sapiens,Yes,3.0,No,No,No,No,No
-210,Saunders2013extensive,GRO-seq,D. melanogaster,Yes,5.0,No,No,No,No,No
-211,Schaaf2013genome,PRO-seq,D. melanogaster,Yes,3.0,No,No,No,No,Yes
-212,Schaukowitch2017intrinsic,GRO-seq,M. musculus,Yes,3.0,No,Yes,No,No,No
-213,Schick2021acute,PRO-seq,H. sapiens,Yes,1.0,Yes,Yes,Yes,No,No
-214,Schoeberl2012biased,GRO-seq,T. thermophila,Yes,5.0,No,Yes,No,No,No
-215,Sen2019histone,PRO-seq,H. sapiens,Yes,2.0,No,Yes,No,No,Yes
-216,Sendinc2019pcif1,"PRO-seq, PRO-cap",H. sapiens,Yes,1.0,No,No,No,No,Yes
-217,Shamie2020unpublished,"GRO-seq, GRO-cap",C. griseus,No,4.0,Yes,Yes,No,No,No
-218,Sheridan2019widespread,"NET-seq, other, GRO-seq",H. sapiens,Yes,3.0,No,No,Yes,No,No
-219,Sienski2012transcriptional,GRO-seq,D. melanogaster,Yes,3.5,No,Yes,Yes,No,Yes
-220,Sigova2013divergent,GRO-seq,H. sapiens,Yes,1.0,No,Yes,No,No,Yes
-221,Sigova2015transcription,GRO-seq,M. musculus,Yes,4.0,No,Yes,Yes,No,Yes
-222,Skowronskakrawczyk2014required,GRO-seq,R. norvegicus,Yes,2.0,No,No,Yes,No,No
-223,Slobodin2017transcription,GRO-seq,H. sapiens,Yes,2.5,No,Yes,No,No,Yes
-224,Smith2021peppro,PRO-seq,H. sapiens,Yes,1.0,No,No,No,No,No
-225,Soccio2015genetic,GRO-seq,M. musculus,Yes,3.0,No,Yes,Yes,No,No
-226,Steinparzer2019transcriptional,"PRO-seq, GRO-seq","H. sapiens, M. musculus",Yes,3.0,No,Yes,No,No,No
-227,Stender2017structural,GRO-seq,H. sapiens,Yes,3.5,No,Yes,Yes,No,No
-228,Stengel2019histone,PRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,No,No
-229,Stengel2020definition,PRO-seq,H. sapiens,Yes,1.0,No,Yes,Yes,No,Yes
-230,Step2014antidiabetic,GRO-seq,M. musculus,Yes,2.5,No,No,No,No,Yes
-231,Strikoudis2016regulation,GRO-seq,M. musculus,Yes,3.0,No,Yes,Yes,No,No
-232,Sumida2018ultra,other,H. sapiens,No,5.0,No,Yes,Yes,No,Yes
-233,Sun2017enhancer,GRO-seq,M. musculus,No,1.0,No,Yes,No,No,No
-234,Takahashi2020role,PRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,No,No
-235,Tan2016stress,GRO-seq,H. sapiens,Yes,4.0,No,Yes,Yes,No,Yes
-236,Tan2018dismissal,"PRO-seq, GRO-seq",H. sapiens,Yes,2.0,No,No,Yes,Yes,No
-237,Tastemel2017transcription,GRO-seq,M. musculus,Yes,3.0,Yes,No,No,No,No
-238,Telese2015lrp8,GRO-seq,M. musculus,Yes,2.5,No,Yes,Yes,Yes,No
-239,Tena2020induction,GRO-seq,M. musculus,Yes,1.0,No,No,No,No,Yes
-240,Teppo2016genome,GRO-seq,H. sapiens,Yes,2.0,No,No,No,No,No
-241,Thomas2019interaction,PRO-seq,H. sapiens,Yes,2.0,No,Yes,Yes,No,No
-242,Tome2018single,other,"M. musculus, H. sapiens",Yes,3.0,No,No,No,No,No
-243,Toropainen2016global,GRO-seq,H. sapiens,Yes,1.0,No,No,Yes,No,No
-244,Trizzino2018tumor,GRO-seq,H. sapiens,Yes,4.0,Yes,Yes,Yes,No,No
-245,Ueberschar2019ben,PRO-seq,D. melanogaster,Yes,4.0,No,Yes,Yes,No,Yes
-246,Vaid2020release,PRO-seq,D. melanogaster,Yes,3.0,Yes,Yes,Yes,No,No
-247,Veloso2013genome-wide,other,H. sapiens,Yes,1.5,No,No,No,No,No
-248,Vian2018energetics,"other, GRO-seq",M. musculus,Yes,3.0,No,Yes,Yes,Yes,Yes
-249,Vihervaara2017transcriptional,PRO-seq,H. sapiens,Yes,1.5,No,No,Yes,No,No
-250,Vihervaara2021stress,PRO-seq,"M. musculus, H. sapiens",Yes,4.0,Yes,No,No,No,No
-251,Viiri2019extensive,GRO-seq,H. sapiens,Yes,2.0,No,No,No,No,No
-252,Wan2020h2bg53d,PRO-seq,H. sapiens,Yes,1.0,Yes,Yes,No,No,Yes
-253,Wang2011reprogramming,GRO-seq,H. sapiens,Yes,3.0,No,No,Yes,No,No
-254,Wang2014rna,"PRO-seq, GRO-seq",H. sapiens,Yes,2.0,No,Yes,No,No,Yes
-255,Wang2015epigenetic,GRO-seq,H. sapiens,Yes,2.0,No,No,Yes,No,No
-256,Wang2015lsd1n,GRO-seq,M. musculus,Yes,3.0,No,Yes,Yes,No,No
-257,Wang2015molecular,GRO-seq,M. musculus,Yes,3.0,No,No,No,No,No
-258,Wang2017cell,GRO-seq,M. musculus,Yes,4.0,No,No,No,No,Yes
-259,Wang2018nascent,PRO-seq,M. musculus,Yes,1.0,No,No,No,No,No
-260,Wang2019identification,PRO-seq,H. sapiens,Yes,1.0,Yes,No,No,No,No
-261,Wang2020increased,GRO-seq,H. sapiens,Yes,1.0,No,No,No,No,Yes
-262,Wang2020proapoptotic,GRO-seq,H. sapiens,Yes,1.0,No,No,Yes,No,No
-263,Wei2016long,GRO-seq,M. musculus,Yes,2.0,No,No,No,No,Yes
-264,Wei2016rbfox2,GRO-seq,M. musculus,Yes,3.0,No,No,Yes,No,Yes
-265,Weissmiller2019inhibition,PRO-seq,H. sapiens,Yes,2.0,Yes,No,Yes,No,No
-266,Williams2015pausing,GRO-seq,M. musculus,Yes,2.0,No,Yes,No,No,Yes
-267,Williamson2017uv,GRO-seq,H. sapiens,Yes,1.0,No,Yes,No,No,Yes
-268,Woo2018ted,PRO-seq,H. sapiens,Yes,1.0,No,Yes,No,No,Yes
-269,Wu2017indentifying,GRO-seq,M. musculus,Yes,4.5,No,No,No,No,No
-270,Xiao2019pervasive,GRO-seq,H. sapiens,Yes,4.0,No,No,Yes,Yes,No
-271,Yang2013lncrna,GRO-seq,H. sapiens,Yes,1.5,No,No,Yes,No,Yes
-272,Yang2017glucocorticoid,GRO-seq,H. sapiens,Yes,2.0,No,No,Yes,No,No
-273,Yu2015panoramix,GRO-seq,D. melanogaster,Yes,5.0,No,Yes,Yes,No,No
-274,Yu2020negative,PRO-seq,M. musculus,Yes,2.0,No,Yes,Yes,No,No
-275,Zhang2015enhancer,GRO-seq,M. musculus,Yes,2.0,No,No,Yes,No,No
-276,Zhang2016regulation,GRO-seq,H. sapiens,Yes,3.0,No,No,Yes,No,No
-277,Zhang2017hepatic,GRO-seq,M. musculus,Yes,2.5,No,No,Yes,No,Yes
-278,Zhang2018timing,other,H. sapiens,No,2.0,No,No,No,No,No
-279,Zhang2019arerg,GRO-seq,H. sapiens,Yes,2.0,No,Yes,No,Yes,No
-280,Zhang2019fundamental,GRO-seq,M. musculus,Yes,1.0,No,No,Yes,Yes,Yes
-281,Zhang2020bcatenin,GRO-seq,M. musculus,Yes,5.0,Yes,Yes,No,No,No
-282,Zhang2021physiological,GRO-seq,M. musculus,Yes,1.0,No,No,No,Yes,Yes
-283,Zhao2016high,PRO-seq,H. sapiens,Yes,1.5,No,Yes,No,No,Yes
-284,Zhao2019myod,PRO-seq,M. musculus,Yes,2.0,No,Yes,No,No,No
-285,Zhu2017comprehensive,GRO-seq,M. musculus,Yes,3.5,No,Yes,Yes,Yes,Yes
-286,Zhu2018rna,"NET-seq, GRO-seq",A. thaliana,Yes,3.0,No,Yes,No,No,No
-287,Zhu2019non,GRO-seq,H. sapiens,Yes,1.5,No,Yes,Yes,No,No
-288,Zhu2021calcium,GRO-seq,M. musculus,Yes,3.5,Yes,No,Yes,Yes,No
+Paper identifier,Protocols,Organisms,Published?,Median QC score,ATAC-seq,RNA-seq,ChIP-seq,3D seq,Other seq
+Aeby2020decapping,PRO-seq,M. musculus,Yes,1,No,Yes,No,No,No
+Agarwal2021kdm1a,"other, GRO-seq",M. musculus,Yes,1,No,Yes,Yes,No,No
+Aho2019displacement,PRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,No
+Akulenko2018transcriptional,GRO-seq,D. melanogaster,Yes,3,No,No,No,No,Yes
+Alexander2019imprinted,PRO-seq,M. musculus,No,2,No,No,No,No,No
+Alhusini2017genomewide,GRO-seq,S. cerevisiae,Yes,4.5,No,No,No,No,No
+Allen2014global,GRO-seq,H. sapiens,Yes,3,No,No,No,No,Yes
+Anderson2020defining,PRO-seq,M. musculus,Yes,3,No,No,No,No,No
+Andersson2014nuclear,GRO-seq,H. sapiens,Yes,1,No,No,No,No,Yes
+Andrade2015dna,other,H. sapiens,Yes,2.5,No,No,No,No,No
+Andrysik2017identification,GRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,Yes
+Aoi2020nelf,"PRO-seq, PRO-cap",H. sapiens,Yes,2,No,No,Yes,No,No
+Aprile-garcia2019nascent,PRO-seq,H. sapiens,Yes,2.5,No,No,Yes,No,No
+Ba2020ctcf,GRO-seq,M. musculus,Yes,1,No,No,Yes,Yes,Yes
+Bahat2019targeting,GRO-seq,H. sapiens,Yes,2,No,Yes,No,No,Yes
+Barbieri2020rapid,other,H. sapiens,Yes,4,No,Yes,No,No,No
+Barucci2020small,PRO-seq,C. elegans,Yes,3,No,Yes,No,No,Yes
+Beckedorff2020human,PRO-seq,H. sapiens,Yes,1,Yes,Yes,Yes,No,Yes
+Bi2020enhancer,GRO-seq,H. sapiens,Yes,2,Yes,Yes,Yes,No,No
+Birkenheuer2018herpes,GRO-seq,H. sapiens,Yes,1,No,Yes,No,No,No
+Birkenheuer2020rna,PRO-seq,H. sapiens,Yes,1,No,No,No,No,No
+Blumberg2021characterizing,PRO-seq,H. sapiens,Yes,1,No,Yes,No,No,No
+Boija2017cbp,PRO-seq,D. melanogaster,Yes,3.5,No,No,Yes,No,Yes
+Bonelt2019precocious,GRO-seq,M. musculus,Yes,2,Yes,Yes,Yes,No,No
+Booth2016divergence,"PRO-cap, PRO-seq","S. cerevisiae, S. pombe",Yes,4,No,Yes,No,No,No
+Booth2018cdk9,PRO-seq,S. pombe,Yes,4,No,No,No,No,No
+Bouvyliivrand2017analysis,GRO-seq,H. sapiens,Yes,2,No,No,No,No,No
+Boxer2020mecp2,PRO-seq,M. musculus,Yes,2,No,Yes,Yes,Yes,Yes
+Busslinger2017cohesin,GRO-seq,M. musculus,Yes,4,No,Yes,Yes,No,No
+Cardamone2018mitochondrial,GRO-seq,M. musculus,Yes,3.5,No,Yes,Yes,No,No
+Cecere2013zfp1,GRO-seq,C. elegans,Yes,4,No,No,No,No,No
+Cecere2014global,GRO-seq,C. elegans,Yes,4,No,No,No,No,No
+Chen2014gene,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
+Chen2015paf1,"other, GRO-seq",H. sapiens,Yes,2,No,Yes,Yes,No,No
+Chen2016cutoff,GRO-seq,D. melanogaster,Yes,5,No,Yes,Yes,No,No
+Chen2017rchip,GRO-seq,H. sapiens,Yes,4,No,No,Yes,No,No
+Chen2018augmented,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
+Chen2018rna,GRO-seq,M. musculus,Yes,4.5,No,No,No,No,Yes
+Chivu2020unpublished,ChRO-seq,"H. sapiens, E. caballus",No,0,Yes,No,Yes,No,Yes
+Chu2018chromatin,"ChRO-seq, other, PRO-seq",H. sapiens,Yes,1,No,No,No,No,No
+Compagno2017phosphatidylinositol,GRO-seq,M. musculus,Yes,1.5,No,No,No,No,Yes
+Core2008nascent,GRO-seq,H. sapiens,Yes,4,No,No,No,No,No
+Core2012defining,GRO-seq,D. melanogaster,Yes,3,No,No,Yes,No,No
+Core2014analysis,"GRO-cap, GRO-seq, PRO-seq",H. sapiens,Yes,3.5,No,No,No,No,No
+Cosby2021recurrent,PRO-seq,M. velifer,Yes,4,No,No,Yes,No,No
+Cuartero2020control,GRO-seq,M. musculus,Yes,3,Yes,Yes,Yes,Yes,No
+Czimmerer2018transcription,GRO-seq,M. musculus,Yes,4,Yes,Yes,Yes,No,No
+Dai2020loop,GRO-seq,M. musculus,Yes,1,No,No,Yes,Yes,Yes
+Daniel2018nuclear,GRO-seq,M. musculus,Yes,3,Yes,Yes,Yes,No,No
+Danko2013signaling,GRO-seq,H. sapiens,Yes,2,No,No,No,No,No
+Danko2015identification,PRO-seq,H. sapiens,Yes,3,No,No,No,No,No
+Danko2018dynamic,PRO-seq,"H. sapiens, M. mulatta, M. musculus, P. troglodytes, R. norvegicus",Yes,3,No,No,No,No,No
+Delgado-benito2018chromatin,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
+Dorighi2017mll3,GRO-seq,M. musculus,Yes,4,Yes,Yes,Yes,No,Yes
+Douillet2020uncoupling,PRO-seq,M. musculus,Yes,1,No,Yes,Yes,No,Yes
+Duarte2016transcription,PRO-seq,D. melanogaster,Yes,3,No,Yes,No,No,No
+Dukler2017nascent,PRO-seq,H. sapiens,Yes,1,No,No,No,No,No
+Duttke2015human,"GRO-seq, GRO-cap",H. sapiens,Yes,4,No,No,No,No,No
+Duttke2017unpublished,"GRO-seq, GRO-cap",D. melanogaster,No,3.5,No,No,No,No,No
+Elkon2015myc,GRO-seq,H. sapiens,Yes,3,No,Yes,No,No,Yes
+Elrod2019integrator,PRO-seq,D. melanogaster,Yes,3,Yes,Yes,Yes,No,No
+Emmett2017histone,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
+Engreitz2016local,PRO-seq,M. musculus,Yes,2,Yes,Yes,Yes,No,No
+Erhard2015nascent,GRO-seq,Z. mays,Yes,2,No,No,No,No,No
+Escoubet-lozach2011mechanisms,GRO-seq,M. musculus,Yes,4,No,Yes,Yes,No,No
+Esousa2019kinetics,PRO-seq,M. musculus,Yes,1,No,Yes,No,No,No
+Estaras2015smad,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
+Etchegaray2019histone,PRO-seq,M. musculus,Yes,1,No,No,Yes,No,Yes
+Fan2020drb,"PRO-seq, other",H. sapiens,Yes,1,No,Yes,Yes,No,Yes
+Fang2014circadian,GRO-seq,M. musculus,Yes,1.5,No,No,Yes,No,Yes
+Fant2020tfiid,PRO-seq,"D. melanogaster, H. sapiens",Yes,3.5,No,No,No,No,No
+Fei2018ndf,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
+Fleischer2017dna,GRO-seq,H. sapiens,Yes,3.5,No,No,No,No,Yes
+Flynn20167skbaf,GRO-seq,M. musculus,Yes,2,Yes,No,Yes,No,Yes
+Fong2014pre,GRO-seq,H. sapiens,Yes,5,No,Yes,No,No,No
+Fong2017rna,NET-seq,H. sapiens,Yes,2.5,No,No,Yes,No,No
+Fonseca2019diverse,GRO-seq,M. musculus,Yes,3.5,No,Yes,Yes,No,No
+Franco2015tnfalpha,GRO-seq,H. sapiens,Yes,1,No,No,Yes,No,No
+Franco2018enhancer,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
+Fuda2012fcp1,GRO-seq,D. melanogaster,Yes,4.5,No,No,No,No,No
+Fuda2015gaga,GRO-seq,D. melanogaster,Yes,5,No,No,Yes,No,Yes
+Galbraith2013hif1a,GRO-seq,H. sapiens,Yes,4,No,No,Yes,No,Yes
+Gally2020gain,PRO-seq,H. sapiens,Yes,2,Yes,No,No,No,Yes
+Gao2017thyroid,GRO-seq,H. sapiens,Yes,4,No,Yes,Yes,No,No
+Gao2018jmjd6,GRO-seq,H. sapiens,Yes,3,No,Yes,Yes,No,No
+Gardini2014integrator,GRO-seq,H. sapiens,Yes,3,No,Yes,Yes,No,No
+Gibson2016chemical,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,Yes
+Godfrey2017mll,other,H. sapiens,Yes,1,No,No,Yes,Yes,No
+Guan2018diet,GRO-seq,M. musculus,Yes,4,No,No,Yes,No,No
+Hah2011rapid,GRO-seq,H. sapiens,Yes,3,No,No,No,No,No
+Hah2013enhancer,GRO-seq,H. sapiens,Yes,2,No,No,No,No,No
+Hah2015inflammation,GRO-seq,M. musculus,Yes,1.5,No,No,No,No,No
+Harman2021invivo,GRO-seq,M. musculus,Yes,1.5,Yes,Yes,No,Yes,No
+Heinaniemi2016transcription,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
+Heinz2013effect,GRO-seq,M. musculus,Yes,2,No,No,Yes,No,Yes
+Herold2019recruitment,GRO-seq,H. sapiens,Yes,4,No,Yes,Yes,No,Yes
+Hetzel2016nascent,"GRO-seq, GRO-cap",A. thaliana,Yes,3,No,Yes,No,No,No
+Hong2017dissociation,GRO-seq,M. musculus,Yes,1.5,No,Yes,Yes,No,No
+Horibata2018erpositive,PRO-seq,H. sapiens,Yes,1,No,No,No,No,No
+Hou2019paf1c,PRO-seq,M. musculus,Yes,1,Yes,Yes,Yes,No,Yes
+Hu2012dicer,GRO-seq,H. sapiens,Yes,2.5,No,Yes,Yes,No,Yes
+Huang2020integrator,PRO-seq,D. melanogaster,Yes,3,No,Yes,Yes,No,No
+Ikegami2020phosphorylated,GRO-seq,H. sapiens,Yes,1,Yes,Yes,Yes,No,No
+Illingworth2016polycomb,GRO-seq,M. musculus,Yes,3.5,No,No,Yes,No,Yes
+Incarnato2017vivo,other,E. coli,Yes,4,No,Yes,No,No,Yes
+Jaeger2020selective,"PRO-seq, other",H. sapiens,Yes,1,No,Yes,Yes,Yes,Yes
+Jager2016nuclear,GRO-seq,M. musculus,Yes,2,No,No,Yes,No,Yes
+Ji2011transcriptional,GRO-seq,M. musculus,Yes,2,No,No,No,No,No
+Ji2013sr,GRO-seq,M. musculus,Yes,4,No,No,Yes,No,No
+Jiang2018multi,GRO-seq,H. sapiens,Yes,1.5,No,Yes,No,No,Yes
+Jin2013high,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,Yes,No
+Jin2014chem,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
+Johnson2017biotin,GRO-seq,M. musculus,Yes,2,No,Yes,No,No,No
+Johnston2020nascent,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,Yes
+Jones2023unpublished,PRO-seq,H. sapiens,No,3,No,No,No,No,No
+Jonkers2014genome,GRO-seq,M. musculus,Yes,2,No,No,No,No,No
+Judd2020unpublished,"other, PRO-seq",H. sapiens,No,3.5,No,No,No,No,No
+Judd2021pioneer,PRO-seq,D. melanogaster,Yes,3,Yes,Yes,Yes,No,Yes
+Kaikkonen2013remodeling,GRO-seq,M. musculus,Yes,3,No,No,Yes,No,No
+Kaikkonen2014control,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,Yes,No
+Kaikkonen2017genome,GRO-seq,S. scrofa,Yes,4,No,No,No,No,No
+Kantidakis2016mutation,GRO-seq,M. musculus,Yes,1,No,No,Yes,No,No
+Kelly2020unpublished,PRO-seq,M. musculus,No,2,No,No,No,No,Yes
+Khodor2011nascent,other,D. melanogaster,Yes,3,No,Yes,No,No,No
+Kim2018pluripotency,PRO-cap,M. musculus,Yes,4.5,Yes,Yes,Yes,No,Yes
+Kloetgen2020three,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,Yes,Yes
+Komarov2020epigenetic,GRO-seq,D. melanogaster,Yes,3,No,Yes,No,No,No
+Korkmaz2019crispr,GRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,No
+Kourtis2018oncogenic,GRO-seq,H. sapiens,Yes,3,No,Yes,Yes,No,Yes
+Kriaucionis2019unpublished,"PRO-seq, PRO-cap",H. sapiens,No,2,No,Yes,No,No,Yes
+Kristjansdottir2020population,"PRO-seq, PRO-cap",H. sapiens,Yes,4,No,No,No,No,No
+Kruesi2013condensin,"GRO-seq, GRO-cap",C. elegans,Yes,3.5,No,No,Yes,No,No
+Kuosmanen2018nrf2,GRO-seq,H. sapiens,Yes,2.5,No,Yes,No,No,Yes
+Kwak2013precise,"PRO-seq, PRO-cap",D. melanogaster,Yes,4,No,No,No,No,No
+Kwon2017locus,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
+Lai2020directed,PRO-seq,M. musculus,Yes,1,No,Yes,No,No,No
+Laitem2015cdk9,GRO-seq,H. sapiens,Yes,3,No,No,No,No,No
+Lam2013rev,"GRO-cap, GRO-seq",M. musculus,Yes,3.5,No,No,Yes,No,No
+Larschan2011x,GRO-seq,D. melanogaster,Yes,3,No,No,No,No,No
+Le2013mapping,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
+Leroy2019ledgf,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
+Leveille2015genome,GRO-seq,H. sapiens,Yes,3,No,Yes,Yes,Yes,Yes
+Li2013functional,GRO-seq,H. sapiens,Yes,1,No,No,Yes,No,Yes
+Li2013ncor,GRO-seq,M. musculus,Yes,5,No,No,Yes,No,No
+Li2015condensin,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
+Li2017grid,GRO-seq,H. sapiens,Yes,4,No,No,No,No,Yes
+Li2018lncrna,GRO-seq,H. sapiens,Yes,3,No,Yes,No,No,Yes
+Li2020human,PRO-seq,H. sapiens,Yes,3,No,No,No,No,No
+Li2020signalosome,PRO-seq,R. norvegicus,Yes,4,No,No,Yes,No,No
+Li2021comprehensive,GRO-seq,H. sapiens,Yes,1.5,No,Yes,No,No,No
+Liang2018targeting,PRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,Yes
+Lin2012global,GRO-seq,M. musculus,Yes,2.5,No,No,Yes,Yes,No
+Link2018analysis,"GRO-seq, GRO-cap",M. musculus,Yes,3,Yes,Yes,Yes,Yes,Yes
+Linnakuosmanen2020nrf2,GRO-seq,H. sapiens,Yes,2,No,Yes,No,No,Yes
+Liu2013brd4,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
+Liu2014enhancer,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
+Liu2017dynamic,GRO-seq,H. sapiens,Yes,3,No,No,No,No,No
+Liu2017identification,PRO-seq,H. sapiens,Yes,2,No,No,No,No,No
+Liu2017transcriptional,GRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,Yes
+Liu2018arabidopsis,GRO-seq,A. thaliana,Yes,4,No,Yes,Yes,No,No
+Liu2018rna-directed,GRO-seq,A. thaliana,Yes,2,No,Yes,Yes,No,No
+Liu2020immediate,GRO-seq,A. thaliana,Yes,4,No,Yes,No,No,No
+Liu2021transcription,PRO-seq,H. sapiens,Yes,1,Yes,No,Yes,No,Yes
+Lloret-llinares2018rna,PRO-seq,M. musculus,Yes,1,No,Yes,No,No,Yes
+Lozano2018rna,PRO-seq,"Z. mays, M. esculenta",No,2.5,No,No,No,No,No
+Lu2017nascent,other,P. falciparum,Yes,4,No,No,Yes,No,No
+Luo2014dynamic,GRO-seq,H. sapiens,Yes,1,No,No,Yes,No,No
+Ma2020super,GRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,Yes
+Magnuson2015identifying,other,H. sapiens,Yes,3,No,No,No,No,No
+Mahat2016mammalian,PRO-seq,M. musculus,Yes,1,No,No,Yes,No,No
+Malinen2017crosstalk,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
+Marazzi2012suppression,GRO-seq,H. sapiens,Yes,3,No,Yes,Yes,No,No
+Mayer2015native,NET-seq,H. sapiens,Yes,4,No,Yes,No,No,No
+Mckinlay2011genome,PRO-seq,S. cerevisiae,Yes,5,No,Yes,No,No,No
+Meng2014convergent,GRO-seq,"M. musculus, H. sapiens",Yes,4,No,No,Yes,No,No
+Meyerswallen2017xx,ChRO-seq,C. lupus familiaris,Yes,3,No,Yes,No,No,Yes
+Miller2015senataxin,GRO-seq,H. sapiens,Yes,5,No,Yes,No,No,No
+Min2011regulating,GRO-seq,M. musculus,Yes,5,No,No,No,No,No
+Mohn2014rhino,GRO-seq,D. melanogaster,Yes,4.5,No,Yes,Yes,No,Yes
+Moreau2018transcriptional,GRO-seq,H. sapiens,Yes,2,No,Yes,No,No,No
+Mukai2020chromatin,ChRO-seq,C. lupus familiaris,Yes,4,No,No,No,No,No
+Murakami2017dynamic,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
+Nair2019phase,GRO-seq,"H. sapiens, M. musculus",Yes,1,Yes,No,Yes,Yes,No
+Nelson2018ppar,GRO-seq,M. musculus,Yes,2,No,Yes,Yes,No,No
+Ngoc2017human,GRO-seq,H. sapiens,Yes,3,No,No,No,No,No
+Nguyen2020dichotomous,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
+Nilson2017oxidative,PRO-seq,H. sapiens,Yes,1.5,No,No,Yes,No,No
+Niskanen2015global,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
+Niskanen2018endothelial,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,Yes
+Nojima2015mammalian,"NET-seq, other",H. sapiens,Yes,2,No,Yes,No,No,No
+Oh2021enhancer,GRO-seq,H. sapiens,Yes,2,No,No,Yes,Yes,No
+Oittinen2017polycomb,GRO-seq,M. musculus,Yes,2,No,No,Yes,No,No
+Orioli2016human,other,H. sapiens,Yes,4.5,No,No,Yes,No,Yes
+Parida2019nucleotide,"PRO-seq, PRO-cap",H. sapiens,Yes,3,No,No,No,No,No
+Parikh2018critical,GRO-seq,D. melanogaster,Yes,3,No,Yes,No,No,Yes
+Park2020global,GRO-seq,H. sapiens,Yes,1.5,No,No,Yes,Yes,No
+Parua2018cdk9-pp1,PRO-seq,S. pombe,Yes,4,No,No,Yes,No,No
+Patel2020robust,PRO-seq,H. sapiens,Yes,2,No,Yes,No,No,Yes
+Perreault2019epigenetic,PRO-seq,H. sapiens,Yes,3.5,No,No,Yes,No,Yes
+Phanstiel2017static,PRO-seq,H. sapiens,Yes,4,Yes,Yes,Yes,Yes,No
+Puc2015ligand,"GRO-seq, PRO-cap",H. sapiens,Yes,2.5,No,No,Yes,No,No
+Rahnamoun2017mutant,GRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,No
+Rao2017cohesin,PRO-seq,H. sapiens,Yes,1,No,No,Yes,Yes,No
+Rozhkov2013multiple,GRO-seq,D. melanogaster,Yes,3,No,Yes,Yes,No,No
+Salony2016akt,GRO-seq,H. sapiens,Yes,5,No,Yes,No,No,Yes
+Santoriello2020rna,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,Yes
+Saponaro2014recql5,GRO-seq,H. sapiens,Yes,3.5,No,No,Yes,No,No
+Sasse2019nascent,GRO-seq,H. sapiens,Yes,4,No,No,Yes,No,No
+Sathyan2019improved,PRO-seq,H. sapiens,Yes,3,No,No,No,No,No
+Saunders2013extensive,GRO-seq,D. melanogaster,Yes,5,No,No,No,No,No
+Schaaf2013genome,PRO-seq,D. melanogaster,Yes,3,No,No,No,No,Yes
+Schaukowitch2017intrinsic,GRO-seq,M. musculus,Yes,3,No,Yes,No,No,No
+Schick2021acute,PRO-seq,H. sapiens,Yes,1,Yes,Yes,Yes,No,No
+Schoeberl2012biased,GRO-seq,T. thermophila,Yes,5,No,Yes,No,No,No
+Sen2019histone,PRO-seq,H. sapiens,Yes,2,No,Yes,No,No,Yes
+Sendinc2019pcif1,"PRO-seq, PRO-cap",H. sapiens,Yes,1,No,No,No,No,Yes
+Shamie2020unpublished,"GRO-seq, GRO-cap",C. griseus,No,4,Yes,Yes,No,No,No
+Sheridan2019widespread,"NET-seq, other, GRO-seq",H. sapiens,Yes,3,No,No,Yes,No,No
+Sienski2012transcriptional,GRO-seq,D. melanogaster,Yes,3.5,No,Yes,Yes,No,Yes
+Sigova2013divergent,GRO-seq,H. sapiens,Yes,1,No,Yes,No,No,Yes
+Sigova2015transcription,GRO-seq,M. musculus,Yes,4,No,Yes,Yes,No,Yes
+Skowronskakrawczyk2014required,GRO-seq,R. norvegicus,Yes,2,No,No,Yes,No,No
+Slobodin2017transcription,GRO-seq,H. sapiens,Yes,2.5,No,Yes,No,No,Yes
+Smith2021peppro,PRO-seq,H. sapiens,Yes,1,No,No,No,No,No
+Soccio2015genetic,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
+Steinparzer2019transcriptional,"PRO-seq, GRO-seq","H. sapiens, M. musculus",Yes,3,No,Yes,No,No,No
+Stender2017structural,GRO-seq,H. sapiens,Yes,3.5,No,Yes,Yes,No,No
+Stengel2019histone,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
+Stengel2020definition,PRO-seq,H. sapiens,Yes,1,No,Yes,Yes,No,Yes
+Step2014antidiabetic,GRO-seq,M. musculus,Yes,2.5,No,No,No,No,Yes
+Strikoudis2016regulation,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
+Sumida2018ultra,other,H. sapiens,No,5,No,Yes,Yes,No,Yes
+Sun2017enhancer,GRO-seq,M. musculus,No,1,No,Yes,No,No,No
+Takahashi2020role,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
+Tan2016stress,GRO-seq,H. sapiens,Yes,4,No,Yes,Yes,No,Yes
+Tan2018dismissal,"PRO-seq, GRO-seq",H. sapiens,Yes,2,No,No,Yes,Yes,No
+Tastemel2017transcription,GRO-seq,M. musculus,Yes,3,Yes,No,No,No,No
+Telese2015lrp8,GRO-seq,M. musculus,Yes,2.5,No,Yes,Yes,Yes,No
+Tena2020induction,GRO-seq,M. musculus,Yes,1,No,No,No,No,Yes
+Teppo2016genome,GRO-seq,H. sapiens,Yes,2,No,No,No,No,No
+Thomas2019interaction,PRO-seq,H. sapiens,Yes,2,No,Yes,Yes,No,No
+Tome2018single,other,"M. musculus, H. sapiens",Yes,3,No,No,No,No,No
+Toropainen2016global,GRO-seq,H. sapiens,Yes,1,No,No,Yes,No,No
+Trizzino2018tumor,GRO-seq,H. sapiens,Yes,4,Yes,Yes,Yes,No,No
+Ueberschar2019ben,PRO-seq,D. melanogaster,Yes,4,No,Yes,Yes,No,Yes
+Vaid2020release,PRO-seq,D. melanogaster,Yes,3,Yes,Yes,Yes,No,No
+Veloso2013genome-wide,other,H. sapiens,Yes,1.5,No,No,No,No,No
+Vian2018energetics,"other, GRO-seq",M. musculus,Yes,3,No,Yes,Yes,Yes,Yes
+Vihervaara2017transcriptional,PRO-seq,H. sapiens,Yes,1.5,No,No,Yes,No,No
+Vihervaara2021stress,PRO-seq,"M. musculus, H. sapiens",Yes,4,Yes,No,No,No,No
+Viiri2019extensive,GRO-seq,H. sapiens,Yes,2,No,No,No,No,No
+Wan2020h2bg53d,PRO-seq,H. sapiens,Yes,1,Yes,Yes,No,No,Yes
+Wang2011reprogramming,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
+Wang2014rna,"PRO-seq, GRO-seq",H. sapiens,Yes,2,No,Yes,No,No,Yes
+Wang2015epigenetic,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
+Wang2015lsd1n,GRO-seq,M. musculus,Yes,3,No,Yes,Yes,No,No
+Wang2015molecular,GRO-seq,M. musculus,Yes,3,No,No,No,No,No
+Wang2017cell,GRO-seq,M. musculus,Yes,4,No,No,No,No,Yes
+Wang2018nascent,PRO-seq,M. musculus,Yes,1,No,No,No,No,No
+Wang2019identification,PRO-seq,H. sapiens,Yes,1,Yes,No,No,No,No
+Wang2020increased,GRO-seq,H. sapiens,Yes,1,No,No,No,No,Yes
+Wang2020proapoptotic,GRO-seq,H. sapiens,Yes,1,No,No,Yes,No,No
+Wei2016long,GRO-seq,M. musculus,Yes,2,No,No,No,No,Yes
+Wei2016rbfox2,GRO-seq,M. musculus,Yes,3,No,No,Yes,No,Yes
+Weissmiller2019inhibition,PRO-seq,H. sapiens,Yes,2,Yes,No,Yes,No,No
+Williams2015pausing,GRO-seq,M. musculus,Yes,2,No,Yes,No,No,Yes
+Williamson2017uv,GRO-seq,H. sapiens,Yes,1,No,Yes,No,No,Yes
+Woo2018ted,PRO-seq,H. sapiens,Yes,1,No,Yes,No,No,Yes
+Wu2017indentifying,GRO-seq,M. musculus,Yes,4.5,No,No,No,No,No
+Xiao2019pervasive,GRO-seq,H. sapiens,Yes,4,No,No,Yes,Yes,No
+Yang2013lncrna,GRO-seq,H. sapiens,Yes,1.5,No,No,Yes,No,Yes
+Yang2017glucocorticoid,GRO-seq,H. sapiens,Yes,2,No,No,Yes,No,No
+Yu2015panoramix,GRO-seq,D. melanogaster,Yes,5,No,Yes,Yes,No,No
+Yu2020negative,PRO-seq,M. musculus,Yes,2,No,Yes,Yes,No,No
+Zhang2015enhancer,GRO-seq,M. musculus,Yes,2,No,No,Yes,No,No
+Zhang2016regulation,GRO-seq,H. sapiens,Yes,3,No,No,Yes,No,No
+Zhang2017hepatic,GRO-seq,M. musculus,Yes,2.5,No,No,Yes,No,Yes
+Zhang2018timing,other,H. sapiens,No,2,No,No,No,No,No
+Zhang2019arerg,GRO-seq,H. sapiens,Yes,2,No,Yes,No,Yes,No
+Zhang2019fundamental,GRO-seq,M. musculus,Yes,1,No,No,Yes,Yes,Yes
+Zhang2020bcatenin,GRO-seq,M. musculus,Yes,5,Yes,Yes,No,No,No
+Zhang2021physiological,GRO-seq,M. musculus,Yes,1,No,No,No,Yes,Yes
+Zhao2016high,PRO-seq,H. sapiens,Yes,1.5,No,Yes,No,No,Yes
+Zhao2019myod,PRO-seq,M. musculus,Yes,2,No,Yes,No,No,No
+Zhu2017comprehensive,GRO-seq,M. musculus,Yes,3.5,No,Yes,Yes,Yes,Yes
+Zhu2018rna,"NET-seq, GRO-seq",A. thaliana,Yes,3,No,Yes,No,No,No
+Zhu2019non,GRO-seq,H. sapiens,Yes,1.5,No,Yes,Yes,No,No
+Zhu2021calcium,GRO-seq,M. musculus,Yes,3.5,Yes,No,Yes,Yes,No