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configs:
- config_name: Isoform
data_files:
- split: train
path: Isoform/Isoform_train.csv.gz
- split: validation
path: Isoform/Isoform_val.csv.gz
- split: test
path: Isoform/Isoform_test.csv.gz
- config_name: MeanRibosomeLoading
data_files:
- split: train
path: MeanRibosomeLoading/MeanRibosomeLoading_train.csv.gz
- split: validation
path: MeanRibosomeLoading/MeanRibosomeLoading_val.csv.gz
- split: test
path: MeanRibosomeLoading/MeanRibosomeLoading_test.csv.gz
- config_name: CRISPROnTarget
data_files:
- split: train
path: CRISPROnTarget/CRISPROnTarget_train.csv.gz
- split: validation
path: CRISPROnTarget/CRISPROnTarget_val.csv.gz
- split: test
path: CRISPROnTarget/CRISPROnTarget_test.csv.gz
---
# BEACON
## Overview
[BEACON](https://www.proceedings.com/content/079/079017-2949open.pdf) is a collection of RNA benchmarking datasets. This respository includes datasets from BEACON that have been filtered by our criteria to be included in our quality-curated genomic benchmark datasets.
## Dataset structure
The repository is organized as follows:
```
BEACON/
├── README.md
├── Isoform/
│ ├── Isoform_train.csv.gz
│ ├── Isoform_val.csv.gz
│ └── Isoform_test.csv.gz
├── MeanRibosomeLoading/
│ ├── MeanRibosomeLoading_train.csv.gz
│ ├── MeanRibosomeLoading_val.csv.gz
│ └── MeanRibosomeLoading_test.csv.gz
└── CRISPROnTarget/
├── CRISPROnTarget_train.csv.gz
├── CRISPROnTarget_val.csv.gz
└── CRISPROnTarget_test.csv.gz
``` |