import h5py import scipy from scipy import signal import os import lmdb import pickle import numpy as np import pandas as pd data_dir = '/data/datasets/BigDownstream/SEED-VIG/mat/Raw_Data' labels_dir = '/data/datasets/BigDownstream/SEED-VIG/mat/perclos_labels' files = [file for file in os.listdir(data_dir)] files = sorted(files) files_dict = { 'train': files[:15], 'val': files[15:19], 'test': files[19:23], } print(files_dict) dataset = { 'train': list(), 'val': list(), 'test': list(), } db = lmdb.open('/data/datasets/BigDownstream/SEED-VIG/processed', map_size=6000000000) for files_key in files_dict.keys(): for file in files_dict[files_key]: eeg = scipy.io.loadmat(os.path.join(data_dir, file))['EEG'][0][0][0] labels = scipy.io.loadmat(os.path.join(labels_dir, file))['perclos'] print(eeg.shape, labels.shape) eeg = eeg.reshape(885, 8, 200, 17) eeg = eeg.transpose(0, 3, 1, 2) labels = labels[:, 0] print(eeg.shape, labels.shape) for i, (sample, label) in enumerate(zip(eeg, labels)): sample_key = f'{file[:-4]}-{i}' print(sample_key) data_dict = { 'sample': sample, 'label': label } txn = db.begin(write=True) txn.put(key=sample_key.encode(), value=pickle.dumps(data_dict)) txn.commit() dataset[files_key].append(sample_key) txn = db.begin(write=True) txn.put(key='__keys__'.encode(), value=pickle.dumps(dataset)) txn.commit() db.close()