signature
stringlengths
29
44.1k
implementation
stringlengths
0
85.2k
def on_return ( self , node ) : # ( ' value ' , ) """Return statement : look for None , return special sentinal ."""
self . retval = self . run ( node . value ) if self . retval is None : self . retval = ReturnedNone return
def empty ( self , duration ) : '''Empty label annotations . Constructs a single observation with an empty value ( None ) . Parameters duration : number > 0 The duration of the annotation'''
ann = super ( DynamicLabelTransformer , self ) . empty ( duration ) ann . append ( time = 0 , duration = duration , value = None ) return ann
def timeit_profile ( stmt , number , repeat , setup , profiler_factory , pickle_protocol , dump_filename , mono , ** _ignored ) : """Profile a Python statement like timeit ."""
del _ignored globals_ = { } exec_ ( setup , globals_ ) if number is None : # determine number so that 0.2 < = total time < 2.0 like timeit . dummy_profiler = profiler_factory ( ) dummy_profiler . start ( ) for x in range ( 1 , 10 ) : number = 10 ** x t = time . time ( ) for y in rang...
def envs ( self ) : '''Return the available environments'''
ret = [ ] for saltenv in self . opts [ 'pillar_roots' ] : ret . append ( saltenv ) return ret
def _get_cached_requirements ( requirements , saltenv ) : '''Get the location of a cached requirements file ; caching if necessary .'''
req_file , senv = salt . utils . url . parse ( requirements ) if senv : saltenv = senv if req_file not in __salt__ [ 'cp.list_master' ] ( saltenv ) : # Requirements file does not exist in the given saltenv . return False cached_requirements = __salt__ [ 'cp.is_cached' ] ( requirements , saltenv ) if not cached_...
def drain_OD ( q_plant , T , depth_end , SDR ) : """Return the nominal diameter of the entrance tank drain pipe . Depth at the end of the flocculator is used for headloss and length calculation inputs in the diam _ pipe calculation . Parameters q _ plant : float Plant flow rate T : float Design temper...
nu = pc . viscosity_kinematic ( T ) K_minor = con . PIPE_ENTRANCE_K_MINOR + con . PIPE_EXIT_K_MINOR + con . EL90_K_MINOR drain_ID = pc . diam_pipe ( q_plant , depth_end , depth_end , nu , mat . PVC_PIPE_ROUGH , K_minor ) drain_ND = pipe . SDR_available_ND ( drain_ID , SDR ) return pipe . OD ( drain_ND ) . magnitude
def set_driver ( self , resource ) : """Set the driver for a neutron resource . : param resource : Neutron resource in dict format . Expected keys : : ' id ' : < value > , ' hosting _ device ' : { ' id ' : < value > , } , ' router _ type ' : { ' cfg _ agent _ driver ' : < value > , } : returns : driver ...
try : resource_id = resource [ 'id' ] hosting_device = resource [ 'hosting_device' ] hd_id = hosting_device [ 'id' ] if hd_id in self . _hosting_device_routing_drivers_binding : driver = self . _hosting_device_routing_drivers_binding [ hd_id ] self . _drivers [ resource_id ] = driver ...
def _prime_user_perm_caches ( self ) : """Prime both the user and group caches and put them on the ` ` self . user ` ` . In addition add a cache filled flag on ` ` self . user ` ` ."""
perm_cache , group_perm_cache = self . _get_user_cached_perms ( ) self . user . _authority_perm_cache = perm_cache self . user . _authority_group_perm_cache = group_perm_cache self . user . _authority_perm_cache_filled = True
def restore_attr ( self , attr_name ) : """Restore an attribute back onto the target object . : param str attr _ name : the name of the attribute to restore"""
original_attr = self . _original_attr ( attr_name ) if self . _original_attr ( attr_name ) : setattr ( self . obj . __class__ , attr_name , original_attr )
def _balanced_strand_gen ( base_aligns , limit ) : '''given collection of random { aligns } , returns alternating forward / reverse strands up to { total _ aligns } ; will return smaller of forward / reverse collection if less than total _ aligns'''
predicate = lambda align : align . is_reverse gen1 , gen2 = itertools . tee ( ( predicate ( align ) , align ) for align in base_aligns ) for_strand_gen = ( align for pred , align in gen1 if not pred ) rev_strand_gen = ( align for pred , align in gen2 if pred ) combined_gen = iter_zip ( for_strand_gen , rev_strand_gen )...
def remove ( self ) : '''a method to remove the entire table : return string with status message'''
self . table . drop ( self . engine ) exit_msg = '%s table has been removed from %s database.' % ( self . table_name , self . database_name ) self . printer ( exit_msg ) return exit_msg
def parse ( self ) : """The function for parsing the vcard to the vars dictionary ."""
keys = { 'fn' : self . _parse_name , 'kind' : self . _parse_kind , 'adr' : self . _parse_address , 'tel' : self . _parse_phone , 'email' : self . _parse_email , 'role' : self . _parse_role , 'title' : self . _parse_title } for val in self . vcard : try : parser = keys . get ( val [ 0 ] ) parser ( va...
def add_round_key ( state , rkey ) : """Transformation in the Cipher and Inverse Cipher in which a Round Key is added to the State using an XOR operation . The length of a Round Key equals the size of the State ( i . e . , for Nb = 4 , the Round Key length equals 128 bits / 16 bytes ) ."""
state = state . reshape ( 4 , 32 ) rkey = rkey . reshape ( 4 , 32 ) return fcat ( state [ 0 ] ^ rkey [ 0 ] , state [ 1 ] ^ rkey [ 1 ] , state [ 2 ] ^ rkey [ 2 ] , state [ 3 ] ^ rkey [ 3 ] , )
def binary_cross_entropy_with_logits ( input_ , target , name = PROVIDED , loss_weight = None , per_example_weights = None , per_output_weights = None ) : """Calculates the binary cross entropy of the input _ vs inputs . Expects unscaled logits . Do not pass in results of sigmoid operation . Args : input _ : ...
if target is None : raise ValueError ( 'target must be set' ) target = _convert_and_assert_tensors_compatible ( input_ , target ) with tf . name_scope ( 'stats' ) : selected , sum_retrieved , sum_relevant = _compute_precision_recall ( input_ , target , 0 , per_example_weights ) precision = selected / sum_re...
def get_http_header ( self ) -> Response : '''Return the HTTP header . It only attempts to read the first 4 KiB of the payload . Returns : Response , None : Returns an instance of : class : ` . http . request . Response ` or None .'''
with wpull . util . reset_file_offset ( self . block_file ) : data = self . block_file . read ( 4096 ) match = re . match ( br'(.*?\r?\n\r?\n)' , data ) if not match : return status_line , dummy , field_str = match . group ( 1 ) . partition ( b'\n' ) try : version , code , reason = Response . parse_status_l...
def use_mutation ( module_path , operator , occurrence ) : """A context manager that applies a mutation for the duration of a with - block . This applies a mutation to a file on disk , and after the with - block it put the unmutated code back in place . Args : module _ path : The path to the module to mutat...
original_code , mutated_code = apply_mutation ( module_path , operator , occurrence ) try : yield original_code , mutated_code finally : with module_path . open ( mode = 'wt' , encoding = 'utf-8' ) as handle : handle . write ( original_code ) handle . flush ( )
def select_catalogue_within_cell ( self , selector , distance , upper_depth = None , lower_depth = None ) : '''Selects catalogue of earthquakes within distance from point : param selector : Populated instance of : class : ` openquake . hmtk . seismicity . selector . CatalogueSelector ` : param distance : ...
self . catalogue = selector . cartesian_square_centred_on_point ( self . geometry , distance ) if self . catalogue . get_number_events ( ) < 5 : # Throw a warning regarding the small number of earthquakes in # the source ! warnings . warn ( 'Source %s (%s) has fewer than 5 events' % ( self . id , self . name ) )
def create_role ( self , name , role_type , project_id , ttl = "" , max_ttl = "" , period = "" , policies = None , bound_service_accounts = None , max_jwt_exp = '15m' , allow_gce_inference = True , bound_zones = None , bound_regions = None , bound_instance_groups = None , bound_labels = None , mount_point = DEFAULT_MOU...
type_specific_params = { 'iam' : { 'max_jwt_exp' : '15m' , 'allow_gce_inference' : True , } , 'gce' : { 'bound_zones' : None , 'bound_regions' : None , 'bound_instance_groups' : None , 'bound_labels' : None , } , } list_of_strings_params = { 'policies' : policies , 'bound_service_accounts' : bound_service_accounts , 'b...
def plotShape ( includePost = [ 'all' ] , includePre = [ 'all' ] , showSyns = False , showElectrodes = False , synStyle = '.' , synSiz = 3 , dist = 0.6 , cvar = None , cvals = None , iv = False , ivprops = None , includeAxon = True , bkgColor = None , fontSize = 12 , figSize = ( 10 , 8 ) , saveData = None , dpi = 300 ,...
from . . import sim from neuron import h print ( 'Plotting 3D cell shape ...' ) cellsPreGids = [ c . gid for c in sim . getCellsList ( includePre ) ] if includePre else [ ] cellsPost = sim . getCellsList ( includePost ) if not hasattr ( sim . net , 'compartCells' ) : sim . net . compartCells = [ c for c in cellsPos...
def _delete_port_channel_resources ( self , host_id , switch_ip , intf_type , nexus_port , port_id ) : '''This determines if port channel id needs to be freed .'''
# if this connection is not a port - channel , nothing to do . if intf_type != 'port-channel' : return # Check if this driver created it and its no longer needed . try : vpc = nxos_db . get_switch_vpc_alloc ( switch_ip , nexus_port ) except excep . NexusVPCAllocNotFound : # This can occur for non - baremetal co...
def update ( self , deltat = 1.0 ) : '''straight lines , with short life'''
DNFZ . update ( self , deltat ) self . lifetime -= deltat if self . lifetime <= 0 : self . randpos ( ) self . lifetime = random . uniform ( 300 , 600 )
def enqueue_command ( self , command , data ) : """Enqueue command into command queues"""
if command == CommandType . TrialEnd or ( command == CommandType . ReportMetricData and data [ 'type' ] == 'PERIODICAL' ) : self . assessor_command_queue . put ( ( command , data ) ) else : self . default_command_queue . put ( ( command , data ) ) qsize = self . default_command_queue . qsize ( ) if qsize >= QUE...
def __range ( a , bins ) : '''Compute the histogram range of the values in the array a according to scipy . stats . histogram .'''
a = numpy . asarray ( a ) a_max = a . max ( ) a_min = a . min ( ) s = 0.5 * ( a_max - a_min ) / float ( bins - 1 ) return ( a_min - s , a_max + s )
def save ( f , arr , vocab ) : """Save word embedding file . Check : func : ` word _ embedding _ loader . saver . glove . save ` for the API ."""
f . write ( ( '%d %d' % ( arr . shape [ 0 ] , arr . shape [ 1 ] ) ) . encode ( 'utf-8' ) ) for word , idx in vocab : _write_line ( f , arr [ idx ] , word )
def write_failure_file ( failure_msg ) : # type : ( str ) - > None """Create a file ' failure ' if training fails after all algorithm output ( for example , logging ) completes , the failure description should be written to this file . In a DescribeTrainingJob response , Amazon SageMaker returns the first 1024 ...
file_path = os . path . join ( _env . output_dir , 'failure' ) write_file ( file_path , failure_msg )
def depth ( self ) : """The number of hierarchy levels in this category graph . Returns 0 if it contains no categories ."""
categories = self . _categories if not categories : return 0 first_depth = categories [ 0 ] . depth for category in categories [ 1 : ] : if category . depth != first_depth : raise ValueError ( 'category depth not uniform' ) return first_depth
def dock_help ( ) : """Help message for Dock Widget . . . versionadded : : 3.2.1 : returns : A message object containing helpful information . : rtype : messaging . message . Message"""
message = m . Message ( ) message . add ( m . Brand ( ) ) message . add ( heading ( ) ) message . add ( content ( ) ) return message
def keep_params_s ( s , params ) : """Keep the given parameters from a string Same as : meth : ` keep _ params ` but does not use the : attr : ` params ` dictionary Parameters s : str The string of the parameters like section params : list of str The parameter names to keep Returns str The modif...
patt = '(?s)' + '|' . join ( '(?<=\n)' + s + '\s*:.+?\n(?=\S+|$)' for s in params ) return '' . join ( re . findall ( patt , '\n' + s . strip ( ) + '\n' ) ) . rstrip ( )
def list_adb_devices_by_usb_id ( ) : """List the usb id of all android devices connected to the computer that are detected by adb . Returns : A list of strings that are android device usb ids . Empty if there ' s none ."""
out = adb . AdbProxy ( ) . devices ( [ '-l' ] ) clean_lines = new_str ( out , 'utf-8' ) . strip ( ) . split ( '\n' ) results = [ ] for line in clean_lines : tokens = line . strip ( ) . split ( ) if len ( tokens ) > 2 and tokens [ 1 ] == 'device' : results . append ( tokens [ 2 ] ) return results
def get_ntlm_response ( self , flags , challenge , target_info = None , channel_binding = None ) : """Computes the 24 byte NTLM challenge response given the 8 byte server challenge , along with the session key . If NTLMv2 is used , the TargetInfo structure must be supplied , the updated TargetInfo structure will ...
# TODO : IMPLEMENT THE FOLLOWING FEATURES # If NTLM v2 authentication is used and the CHALLENGE _ MESSAGE does not contain both MsvAvNbComputerName and # MsvAvNbDomainName AVPairs and either Integrity is TRUE or Confidentiality is TRUE , then return STATUS _ LOGON _ FAILURE . # If NTLM v2 authentication is used and the...
def InputSplines ( seq_length , n_bases = 10 , name = None , ** kwargs ) : """Input placeholder for array returned by ` encodeSplines ` Wrapper for : ` keras . layers . Input ( ( seq _ length , n _ bases ) , name = name , * * kwargs ) `"""
return Input ( ( seq_length , n_bases ) , name = name , ** kwargs )
def get_all_fields ( cls , class_obj = None , fields = None ) : """TODO : This needs to be properly used"""
def return_fields ( obj ) : internal_fields = fields if internal_fields is None : internal_fields = { } for attribute in dir ( obj ) : try : attr_val = getattr ( obj , attribute ) attr_cls = attr_val . __class__ # If it is a model field , call on init ...
def charts_slug_pollster_trendlines_tsv_get ( self , slug , ** kwargs ) : """Estimates of what the polls suggest about trends Derived data presented on a Pollster Chart . The trendlines on a Pollster chart don ' t add up to 100 : we calculate each label ' s trendline separately . Use the ` charts / { slug } ` res...
kwargs [ '_return_http_data_only' ] = True if kwargs . get ( 'callback' ) : return self . charts_slug_pollster_trendlines_tsv_get_with_http_info ( slug , ** kwargs ) else : ( data ) = self . charts_slug_pollster_trendlines_tsv_get_with_http_info ( slug , ** kwargs ) return data
def bottom ( self ) : """Bottom coordinate ."""
if self . _has_real ( ) : return self . _data . real_bottom return self . _data . bottom
def on_set ( self , key , value ) : """Callback called on successful set . Uses function from _ _ init _ _ ."""
if self . _on_set is not None : self . _on_set ( key , value )
def automatic_density ( cls , structure , kppa , chksymbreak = None , use_symmetries = True , use_time_reversal = True , shifts = ( 0.5 , 0.5 , 0.5 ) ) : """Returns an automatic Kpoint object based on a structure and a kpoint density . Uses Gamma centered meshes for hexagonal cells and Monkhorst - Pack grids othe...
lattice = structure . lattice lengths = lattice . abc shifts = np . reshape ( shifts , ( - 1 , 3 ) ) ngrid = kppa / structure . num_sites / len ( shifts ) mult = ( ngrid * lengths [ 0 ] * lengths [ 1 ] * lengths [ 2 ] ) ** ( 1 / 3. ) num_div = [ int ( round ( 1.0 / lengths [ i ] * mult ) ) for i in range ( 3 ) ] # ensu...
def url ( self ) : """Return the admin url of the object ."""
return urlresolvers . reverse ( "admin:%s_%s_change" % ( self . content_type . app_label , self . content_type . model ) , args = ( self . get_object ( ) . uid , ) )
def lmeasure ( reference_intervals_hier , reference_labels_hier , estimated_intervals_hier , estimated_labels_hier , frame_size = 0.1 , beta = 1.0 ) : '''Computes the tree measures for hierarchical segment annotations . Parameters reference _ intervals _ hier : list of ndarray ` ` reference _ intervals _ hier...
# Compute the number of frames in the window if frame_size <= 0 : raise ValueError ( 'frame_size ({:.2f}) must be a positive ' 'number.' . format ( frame_size ) ) # Validate the hierarchical segmentations validate_hier_intervals ( reference_intervals_hier ) validate_hier_intervals ( estimated_intervals_hier ) # Bui...
def all_to_public ( self ) : """Sets all members , types and executables in this module as public as long as it doesn ' t already have the ' private ' modifier ."""
if "private" not in self . modifiers : def public_collection ( attribute ) : for key in self . collection ( attribute ) : if key not in self . publics : self . publics [ key . lower ( ) ] = 1 public_collection ( "members" ) public_collection ( "types" ) public_collect...
def merge ( left , right , how = "inner" , on = None , left_on = None , right_on = None , left_index = False , right_index = False , sort = False , suffixes = ( "_x" , "_y" ) , copy = True , indicator = False , validate = None , ) : """Database style join , where common columns in " on " are merged . Args : lef...
if not isinstance ( left , DataFrame ) : raise ValueError ( "can not merge DataFrame with instance of type {}" . format ( type ( right ) ) ) return left . merge ( right , how = how , on = on , left_on = left_on , right_on = right_on , left_index = left_index , right_index = right_index , sort = sort , suffixes = su...
def LoadInstallations ( counter ) : """Load installed packages and export the version map . This function may be called multiple times , but the counters will be increased each time . Since Prometheus counters are never decreased , the aggregated results will not make sense ."""
process = subprocess . Popen ( [ "pip" , "list" , "--format=json" ] , stdout = subprocess . PIPE ) output , _ = process . communicate ( ) installations = json . loads ( output ) for i in installations : counter . labels ( i [ "name" ] , i [ "version" ] ) . inc ( )
def dataset_from_dataframe ( df , delays = ( 1 , 2 , 3 ) , inputs = ( 1 , 2 , - 1 ) , outputs = ( - 1 , ) , normalize = False , verbosity = 1 ) : """Compose a pybrain . dataset from a pandas DataFrame Arguments : delays ( list of int ) : sample delays to use for the input tapped delay line Positive and negati...
if isinstance ( delays , int ) : if delays : delays = range ( 1 , delays + 1 ) else : delays = [ 0 ] delays = np . abs ( np . array ( [ int ( i ) for i in delays ] ) ) inputs = [ df . columns [ int ( inp ) ] if isinstance ( inp , ( float , int ) ) else str ( inp ) for inp in inputs ] outputs = [...
def arabicrange ( ) : u"""return a list of arabic characteres . Return a list of characteres between \u060c to \u0652 @ return : list of arabic characteres . @ rtype : unicode"""
mylist = [ ] for i in range ( 0x0600 , 0x00653 ) : try : mylist . append ( unichr ( i ) ) except NameError : # python 3 compatible mylist . append ( chr ( i ) ) except ValueError : pass return mylist
def load ( self , data , context = None ) : """Deserialize data from primitive types . Raises : exc : ` ~ lollipop . errors . ValidationError ` if data is invalid . : param data : Data to deserialize . : param context : Context data . : returns : Loaded data : raises : : exc : ` ~ lollipop . errors . Vali...
errors_builder = ValidationErrorBuilder ( ) for validator in self . validators : try : validator ( data , context ) except ValidationError as ve : errors_builder . add_errors ( ve . messages ) errors_builder . raise_errors ( ) return data
def stop ( self , id ) : """stop the tracker ."""
path = partial ( _path , self . adapter ) path = path ( id ) return self . _delete ( path )
def handle ( self , dict ) : '''Processes a vaild zookeeper request @ param dict : a valid dictionary object'''
# format key key = "zk:{action}:{domain}:{appid}" . format ( action = dict [ 'action' ] , appid = dict [ 'appid' ] , domain = dict [ 'domain' ] ) d = { "domain" : dict [ 'domain' ] , "uuid" : dict [ 'uuid' ] } if dict [ 'action' ] == 'domain-update' : if dict [ 'hits' ] != 0 and dict [ 'window' ] != 0 : d [...
def _set_protected_port ( self , v , load = False ) : """Setter method for protected _ port , mapped from YANG variable / interface / hundredgigabitethernet / protected _ port ( container ) If this variable is read - only ( config : false ) in the source YANG file , then _ set _ protected _ port is considered a...
if hasattr ( v , "_utype" ) : v = v . _utype ( v ) try : t = YANGDynClass ( v , base = protected_port . protected_port , is_container = 'container' , presence = False , yang_name = "protected-port" , rest_name = "protected-port" , parent = self , path_helper = self . _path_helper , extmethods = self . _extmetho...
def clear_recovery_range ( working_dir ) : """Clear out our recovery hint"""
recovery_range_path = os . path . join ( working_dir , '.recovery' ) if os . path . exists ( recovery_range_path ) : os . unlink ( recovery_range_path )
def predict ( self , data , output_margin = False , ntree_limit = 0 , pred_leaf = False ) : """Predict with data . NOTE : This function is not thread safe . For each booster object , predict can only be called from one thread . If you want to run prediction using multiple thread , call bst . copy ( ) to make ...
option_mask = 0x00 if output_margin : option_mask |= 0x01 if pred_leaf : option_mask |= 0x02 self . _validate_features ( data ) length = ctypes . c_ulong ( ) preds = ctypes . POINTER ( ctypes . c_float ) ( ) _check_call ( _LIB . XGBoosterPredict ( self . handle , data . handle , option_mask , ntree_limit , ctyp...
def set_new_version ( new_version : str ) -> bool : """Replaces the version number in the correct place and writes the changed file to disk . : param new _ version : The new version number as a string . : return : ` True ` if it succeeded ."""
filename , variable = config . get ( 'semantic_release' , 'version_variable' ) . split ( ':' ) variable = variable . strip ( ) with open ( filename , mode = 'r' ) as fr : content = fr . read ( ) content = replace_version_string ( content , variable , new_version ) with open ( filename , mode = 'w' ) as fw : fw ...
def from_inline ( cls : Type [ ESCoreEndpointType ] , inline : str ) -> ESCoreEndpointType : """Return ESCoreEndpoint instance from endpoint string : param inline : Endpoint string : return :"""
m = ESCoreEndpoint . re_inline . match ( inline ) if m is None : raise MalformedDocumentError ( ESCoreEndpoint . API ) server = m . group ( 1 ) port = int ( m . group ( 2 ) ) return cls ( server , port )
def std ( self , axis ) : """Returns d - 1 dimensional histogram of ( estimated ) std value along axis NB this is very different from just std of the histogram values ( which describe bin counts )"""
def weighted_std ( values , weights , axis ) : # Stolen from http : / / stackoverflow . com / questions / 2413522 average = np . average ( values , weights = weights , axis = axis ) average = average [ self . _simsalabim_slice ( axis ) ] variance = np . average ( ( values - average ) ** 2 , weights = weight...
def update_uris ( self , new_uri ) : """Update all URIS . : param new _ uri : URI to switch to and update the matching : returns : n / a Note : This overwrites any existing URI"""
self . uri = new_uri # if there is a sub - service , update it too if self . obj : self . obj . base_url = '{0}/{1}' . format ( self . uri , self . service_name )
def _load_rsa_private_key ( pem ) : """PEM encoded PKCS # 8 private key - > rsa . PrivateKey ."""
# ADB uses private RSA keys in pkcs # 8 format . ' rsa ' library doesn ' t support # them natively . Do some ASN unwrapping to extract naked RSA key # ( in der - encoded form ) . See https : / / www . ietf . org / rfc / rfc2313 . txt . # Also http : / / superuser . com / a / 606266. try : der = rsa . pem . load_pem...
def build_docker ( ctx , image ) : """build docker images"""
if image not in DOCKER_IMGS : print ( 'Error: unknown docker image "{0}"!' . format ( image ) , file = sys . stderr ) sys . exit ( 1 ) dinfo = DOCKER_IMGS [ image ] ctx . run ( 'docker rmi -f {0}' . format ( dinfo [ 'name' ] ) , warn = True ) dinfo_work_dir = os . path . join ( dinfo [ 'path' ] , '_work' ) ctx ...
def check_error_cmd ( result ) : """Checks if any function returns an error from firmware in USB - CANmodul . : param ReturnCode result : Error code of the function . : return : True if a function returned error from firmware , otherwise False . : rtype : bool"""
return ( result . value >= ReturnCode . ERRCMD ) and ( result . value < ReturnCode . WARNING )
def interpolate_logscale ( start , end , steps ) : """Interpolate series between start and end in given number of steps - logscale interpolation"""
if start <= 0.0 : warnings . warn ( "Start of logscale interpolation must be positive!" ) start = 1e-5 return np . logspace ( np . log10 ( float ( start ) ) , np . log10 ( float ( end ) ) , steps )
def movementCompute ( self , displacement , noiseFactor = 0 , moduleNoiseFactor = 0 ) : """@ param displacement ( dict ) The change in location . Example : { " top " : 10 , " left " , 10} @ return ( dict ) Data for logging / tracing ."""
if noiseFactor != 0 : xdisp = np . random . normal ( 0 , noiseFactor ) ydisp = np . random . normal ( 0 , noiseFactor ) else : xdisp = 0 ydisp = 0 locationParams = { "displacement" : [ displacement [ "top" ] + ydisp , displacement [ "left" ] + xdisp ] , "noiseFactor" : moduleNoiseFactor } for module in ...
def _load_prev ( self ) : """Load the next days data ( or file ) without decrementing the date . Repeated calls will not decrement date / file and will produce the same data Uses info stored in object to either decrement the date , or the file . Looks for self . _ load _ by _ date flag ."""
if self . _load_by_date : prev_date = self . date - pds . DateOffset ( days = 1 ) return self . _load_data ( date = prev_date ) else : return self . _load_data ( fid = self . _fid - 1 )
def get_close_matches ( word , possibilities , n = None , cutoff = 0.6 ) : """Overrides ` difflib . get _ close _ match ` to controle argument ` n ` ."""
if n is None : n = settings . num_close_matches return difflib_get_close_matches ( word , possibilities , n , cutoff )
def load_keypair ( keypair_file ) : '''load a keypair from a keypair file . We add attributes key ( the raw key ) and public _ key ( the url prepared public key ) to the client . Parameters keypair _ file : the pem file to load .'''
from Crypto . PublicKey import RSA # Load key with open ( keypair_file , 'rb' ) as filey : key = RSA . import_key ( filey . read ( ) ) return quote_plus ( key . publickey ( ) . exportKey ( ) . decode ( 'utf-8' ) )
def _shuffle_field ( self , * args ) : """Permute field"""
p = self . _permutation fields = [ ] for arg in args : fields . append ( arg [ p ] ) if len ( fields ) == 1 : return fields [ 0 ] else : return fields
def pause ( self , payload ) : """Start the daemon and all processes or only specific processes ."""
# Pause specific processes , if ` keys ` is given in the payload if payload . get ( 'keys' ) : succeeded = [ ] failed = [ ] for key in payload . get ( 'keys' ) : success = self . process_handler . pause_process ( key ) if success : succeeded . append ( str ( key ) ) else ...
def receive ( self , msg ) : '''The message received from the queue specify a method of the class the actor represents . This invokes it . If the communication is an ASK , sends the result back to the channel included in the message as an ASKRESPONSE . If it is a FUTURE , generates a FUTURERESPONSE to s...
if msg [ TYPE ] == TELL and msg [ METHOD ] == 'stop' : self . running = False self . future_manager . stop ( ) else : result = None try : invoke = getattr ( self . _obj , msg [ METHOD ] ) params = msg [ PARAMS ] result = invoke ( * params [ 0 ] , ** params [ 1 ] ) except Exce...
def get_next_interval_histogram ( self , range_start_time_sec = 0.0 , range_end_time_sec = sys . maxsize , absolute = False ) : '''Read the next interval histogram from the log , if interval falls within an absolute or relative time range . Timestamps are assumed to appear in order in the log file , and as such...
return self . _decode_next_interval_histogram ( None , range_start_time_sec , range_end_time_sec , absolute )
def url_defaults ( self , func : Callable , name : AppOrBlueprintKey = None ) -> Callable : """Add a url default preprocessor . This is designed to be used as a decorator . An example usage , . . code - block : : python @ app . url _ defaults def default ( endpoint , values ) :"""
self . url_default_functions [ name ] . append ( func ) return func
def remove ( self , index ) : """Remove chunk at index . Doesn ' t actually delete data , copies last chunk ' s data over data to be removed , and decreases the count"""
assert index < self . count last_index = self . count - 1 data = self . get ( index ) if index == last_index : # easy case - nothing to do except zero last chunk last_data = data moved = None else : last_data = self . get ( last_index ) # copy the last chunk ' s data over the data to be deleted data...
def start_pty_request ( self , channel , term , modes ) : """Start a PTY - intended to run it a ( green ) thread ."""
request = self . dummy_request ( ) request . _sock = channel request . modes = modes request . term = term request . username = self . username # This should block until the user quits the pty self . pty_handler ( request , self . client_address , self . tcp_server , self . vfs , self . session ) # Shutdown the entire ...
def accept_record ( self , record ) : """Accept a record for inclusion in the community . : param record : Record object ."""
with db . session . begin_nested ( ) : req = InclusionRequest . get ( self . id , record . id ) if req is None : raise InclusionRequestMissingError ( community = self , record = record ) req . delete ( ) self . add_record ( record ) self . last_record_accepted = datetime . utcnow ( )
def graph_key_from_tag ( tag , entity_index ) : """Returns a key from a tag entity Args : tag ( tag ) : this is the tag selected to get the key from entity _ index ( int ) : this is the index of the tagged entity Returns : str : String representing the key for the given tagged entity ."""
start_token = tag . get ( 'start_token' ) entity = tag . get ( 'entities' , [ ] ) [ entity_index ] return str ( start_token ) + '-' + entity . get ( 'key' ) + '-' + str ( entity . get ( 'confidence' ) )
def MakeRequest ( self , data ) : """Make a HTTP Post request to the server ' control ' endpoint ."""
stats_collector_instance . Get ( ) . IncrementCounter ( "grr_client_sent_bytes" , len ( data ) ) # Verify the response is as it should be from the control endpoint . response = self . http_manager . OpenServerEndpoint ( path = "control?api=%s" % config . CONFIG [ "Network.api" ] , verify_cb = self . VerifyServerControl...
def print ( cls , * args , ** kwargs ) : """Print synchronized ."""
# pylint : disable = protected - access with _shared . _PRINT_LOCK : print ( * args , ** kwargs ) _sys . stdout . flush ( )
def read_request_from_str ( data , ** params ) : """从字符串中读取请求头 , 并根据格式化字符串模板 , 进行字符串格式化 : param data : : param params : : return :"""
method , uri = None , None headers = { } host = '' try : split_list = data . split ( '\n\n' ) headers_text = split_list [ 0 ] body = '\n\n' . join ( split_list [ 1 : ] ) except : headers_text = data body = '' body = force_bytes ( body ) for k , v in params . items ( ) : body = body . replace ( b...
def map2set ( data , relation ) : """EXPECTING A is _ data ( relation ) THAT MAPS VALUES TO lists THE LISTS ARE EXPECTED TO POINT TO MEMBERS OF A SET A set ( ) IS RETURNED"""
if data == None : return Null if isinstance ( relation , Data ) : Log . error ( "Does not accept a Data" ) if is_data ( relation ) : try : # relation [ d ] is expected to be a list # return set ( cod for d in data for cod in relation [ d ] ) output = set ( ) for d in data : f...
def run_function ( app_function , event , context ) : """Given a function and event context , detect signature and execute , returning any result ."""
# getargspec does not support python 3 method with type hints # Related issue : https : / / github . com / Miserlou / Zappa / issues / 1452 if hasattr ( inspect , "getfullargspec" ) : # Python 3 args , varargs , keywords , defaults , _ , _ , _ = inspect . getfullargspec ( app_function ) else : # Python 2 args ,...
def missing_representative_structure ( self ) : """list : List of genes with no mapping to a representative structure ."""
return [ x . id for x in self . genes if not self . genes_with_a_representative_structure . has_id ( x . id ) ]
def get_translation_args ( self , args ) : """Returns linguist args from model args ."""
translation_args = [ ] for arg in args : condition = self . _get_linguist_condition ( arg , transform = True ) if condition : translation_args . append ( condition ) return translation_args
def add_done_callback ( self , fn ) : """Attaches a callable that will be called when the future finishes . Args : fn : A callable that will be called with this future as its only argument when the future completes or is cancelled . The callable will always be called by a thread in the same process in which...
with self . _condition : if self . _state not in [ CANCELLED , CANCELLED_AND_NOTIFIED , FINISHED ] : self . _done_callbacks . append ( fn ) return fn ( self )
def resolve_id ( marked_id ) : """Given a marked ID , returns the original ID and its : tl : ` Peer ` type ."""
if marked_id >= 0 : return marked_id , types . PeerUser # There have been report of chat IDs being 10000xyz , which means their # marked version is - 10000xyz , which in turn looks like a channel but # it becomes 00xyz ( = xyz ) . Hence , we must assert that there are only # two zeroes . m = re . match ( r'-100([^0...
def _to_fields ( self , data ) : '''Return generator over the ( numerical ) PLY representation of the list data ( length followed by actual data ) .'''
( len_t , val_t ) = self . list_dtype ( ) data = _np . asarray ( data , dtype = val_t ) . ravel ( ) yield _np . dtype ( len_t ) . type ( data . size ) for x in data : yield x
def fetch_results_from_source ( self , * fields , dataframe = False ) : """Get values for specific fields in the elasticsearch index , from source : param fields : a list of fields that have to be retrieved from the index : param dataframe : if true , will return the data in the form of a pandas . DataFrame :...
if not fields : raise AttributeError ( "Please provide the fields to get from elasticsearch!" ) self . reset_aggregations ( ) self . search = self . search . extra ( _source = fields ) self . search = self . search . extra ( size = self . size ) response = self . search . execute ( ) hits = response . to_dict ( ) [...
def _convertUnitAsWords ( self , unitText ) : """Converts text units into their number value . @ type unitText : string @ param unitText : number text to convert @ rtype : integer @ return : numerical value of unitText"""
word_list , a , b = re . split ( r"[,\s-]+" , unitText ) , 0 , 0 for word in word_list : x = self . ptc . small . get ( word ) if x is not None : a += x elif word == "hundred" : a *= 100 else : x = self . ptc . magnitude . get ( word ) if x is not None : b += ...
def process_teffs ( self , teffs , coords , s = np . array ( [ 0. , 0. , 1. ] ) , t = None ) : """Change the local effective temperatures for any values within the " cone " defined by the spot . Any teff within the spot will have its current value multiplied by the " relteff " factor : parameter array teffs :...
if t is None : # then assume at t0 t = self . _t0 pointing_vector = self . pointing_vector ( s , t ) logger . debug ( "spot.process_teffs at t={} with pointing_vector={} and radius={}" . format ( t , pointing_vector , self . _radius ) ) cos_alpha_coords = np . dot ( coords , pointing_vector ) / np . linalg . norm (...
def format_table ( table , column_names = None , column_specs = None , max_col_width = 32 , report_dimensions = False ) : '''Table pretty printer . Expects tables to be given as arrays of arrays . Example : print format _ table ( [ [ 1 , " 2 " ] , [ 3 , " 456 " ] ] , column _ names = [ ' A ' , ' B ' ] )'''
if len ( table ) > 0 : col_widths = [ 0 ] * len ( list ( table ) [ 0 ] ) elif column_specs is not None : col_widths = [ 0 ] * ( len ( column_specs ) + 1 ) elif column_names is not None : col_widths = [ 0 ] * len ( column_names ) my_column_names = [ ] if column_specs is not None : column_names = [ 'Row' ...
async def on_raw_317 ( self , message ) : """WHOIS idle time ."""
target , nickname , idle_time = message . params [ : 3 ] info = { 'idle' : int ( idle_time ) , } if nickname in self . _pending [ 'whois' ] : self . _whois_info [ nickname ] . update ( info )
def extractGlyph ( self , glyph , pointPen = None , onlyGeometry = False ) : """" rehydrate " to a glyph . this requires a glyph as an argument . if a point pen other than the type of pen returned by glyph . getPointPen ( ) is required for drawing , send this the needed point pen ."""
if pointPen is None : pointPen = glyph . getPointPen ( ) glyph . clearContours ( ) glyph . clearComponents ( ) glyph . clearAnchors ( ) glyph . clearGuidelines ( ) glyph . lib . clear ( ) cleanerPen = FilterRedundantPointPen ( pointPen ) self . drawPoints ( cleanerPen ) glyph . anchors = [ dict ( anchor ) for ancho...
def main ( host = 'localhost' , port = 8086 ) : """Instantiate the connection to the InfluxDB client ."""
user = 'root' password = 'root' dbname = 'demo' protocol = 'json' client = DataFrameClient ( host , port , user , password , dbname ) print ( "Create pandas DataFrame" ) df = pd . DataFrame ( data = list ( range ( 30 ) ) , index = pd . date_range ( start = '2014-11-16' , periods = 30 , freq = 'H' ) , columns = [ '0' ] ...
def _end_session ( self , kill = None ) : """End the client session ."""
if self . _stc : if kill is None : kill = os . environ . get ( 'STC_SESSION_TERMINATE_ON_DISCONNECT' ) kill = _is_true ( kill ) self . _stc . end_session ( kill ) self . _stc = None
def assign_ranks_by_cluster ( grid , n , ranks = None ) : """Takes a 2D array representing phenotypes or resource sets across the world , and integer rpresenting the maximum number of clusters allowed , and optionally a dictionary indicating the rank of the cluster of each phenotype / resource set . If this d...
if ranks is None : ranks = generate_ranks ( grid , n ) return assign_ranks_to_grid ( grid , ranks ) , len ( ranks )
def gradient_black ( self , text = None , fore = None , back = None , style = None , start = None , step = 1 , reverse = False , linemode = True , movefactor = 2 , rgb_mode = False ) : """Return a black and white gradient . Arguments : text : String to colorize . This will always be greater than 0. fore : F...
gradargs = { 'step' : step , 'fore' : fore , 'back' : back , 'style' : style , 'reverse' : reverse , 'rgb_mode' : rgb_mode , } if linemode : gradargs [ 'movefactor' ] = 2 if movefactor is None else movefactor method = self . _gradient_black_lines else : method = self . _gradient_black_line if text : ret...
def color ( string , name , style = 'normal' , when = 'auto' ) : """Change the color of the given string ."""
if name not in colors : from . text import oxford_comma raise ValueError ( "unknown color '{}'.\nknown colors are: {}" . format ( name , oxford_comma ( [ "'{}'" . format ( x ) for x in sorted ( colors ) ] ) ) ) if style not in styles : from . text import oxford_comma raise ValueError ( "unknown style '{...
def context ( self , size , placeholder = None , scope = None ) : """Returns this word in context , { size } words to the left , the current word , and { size } words to the right"""
return self . leftcontext ( size , placeholder , scope ) + [ self ] + self . rightcontext ( size , placeholder , scope )
def list ( self , to = values . unset , from_ = values . unset , date_sent_before = values . unset , date_sent = values . unset , date_sent_after = values . unset , limit = None , page_size = None ) : """Lists MessageInstance records from the API as a list . Unlike stream ( ) , this operation is eager and will lo...
return list ( self . stream ( to = to , from_ = from_ , date_sent_before = date_sent_before , date_sent = date_sent , date_sent_after = date_sent_after , limit = limit , page_size = page_size , ) )
def _construct_instance ( cls , values ) : """method used to construct instances from query results this is where polymorphic deserialization occurs"""
# we ' re going to take the values , which is from the DB as a dict # and translate that into our local fields # the db _ map is a db _ field - > model field map items = values . items ( ) field_dict = dict ( [ ( cls . _db_map . get ( k , k ) , v ) for k , v in items ] ) if cls . _is_polymorphic : poly_key = field_...
def close ( self ) : '''Close all connections Return a : class : ` ~ asyncio . Future ` called once all connections have closed'''
if not self . closed : waiters = [ ] queue = self . _queue while queue . qsize ( ) : connection = queue . get_nowait ( ) if connection : closed = connection . close ( ) if closed : waiters . append ( closed ) in_use = self . _in_use_connections ...
def delete_instance ( self , instance_id ) : '''method for removing an instance from AWS EC2 : param instance _ id : string of instance id on AWS : return : string reporting state of instance'''
title = '%s.delete_instance' % self . __class__ . __name__ # validate inputs input_fields = { 'instance_id' : instance_id } for key , value in input_fields . items ( ) : object_title = '%s(%s=%s)' % ( title , key , str ( value ) ) self . fields . validate ( value , '.%s' % key , object_title ) # report query se...
def _get_fit_params ( self , x , fit_key ) : """Transforms the input parameter to fit parameters for the 7dq2 model . That is , maps from x = [ q , chiAx , chiAy , chiAz , chiBx , chiBy , chiBz ] fit _ params = [ np . log ( q ) , chiAx , chiAy , chiHat , chiBx , chiBy , chi _ a ] chiHat is defined in Eq . (...
q , chiAz , chiBz = x [ 0 ] , x [ 3 ] , x [ 6 ] eta = q / ( 1. + q ) ** 2 chi_wtAvg = ( q * chiAz + chiBz ) / ( 1. + q ) chiHat = ( chi_wtAvg - 38. * eta / 113. * ( chiAz + chiBz ) ) / ( 1. - 76. * eta / 113. ) chi_a = ( chiAz - chiBz ) / 2. fit_params = x fit_params [ 0 ] = np . log ( q ) fit_params [ 3 ] = chiHat fit...
def add_group_members ( self , members ) : """Add a new group member to the groups list : param members : member name : type members : str : return : None"""
if not isinstance ( members , list ) : members = [ members ] if not getattr ( self , 'group_members' , None ) : self . group_members = members else : self . group_members . extend ( members )
def import_items ( import_directives , style , quiet_load = False ) : """Import the items in import _ directives and return a list of the imported items Each item in import _ directives should be one of the following forms * a tuple like ( ' module . submodule ' , ( ' classname1 ' , ' classname2 ' ) ) , which i...
imported_objects = { } for directive in import_directives : try : # First try a straight import if isinstance ( directive , six . string_types ) : imported_object = __import__ ( directive ) imported_objects [ directive . split ( '.' ) [ 0 ] ] = imported_object if not quie...
def extract_options_dict ( template , options ) : """Extract options from a dictionary against the template"""
for option , val in template . items ( ) : if options and option in options : yield option , options [ option ] else : yield option , Default ( template [ option ] [ 'default' ] ( os . environ ) )