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def beforeRender ( self , ctx ) : """Implement this hook to initialize the L { initialPerson } and L { initialState } slots with information from the request url ' s query args ."""
# see the comment in Organizer . urlForViewState which suggests an # alternate implementation of this kind of functionality . request = inevow . IRequest ( ctx ) if not set ( [ 'initial-person' , 'initial-state' ] ) . issubset ( set ( request . args ) ) : return initialPersonName = request . args [ 'initial-person'...
def dereference_recursive ( cls , repo , ref_path ) : """: return : hexsha stored in the reference at the given ref _ path , recursively dereferencing all intermediate references as required : param repo : the repository containing the reference at ref _ path"""
while True : hexsha , ref_path = cls . _get_ref_info ( repo , ref_path ) if hexsha is not None : return hexsha
def find_all_matches ( text_log_error , matchers ) : """Find matches for the given error using the given matcher classes Returns * unsaved * TextLogErrorMatch instances ."""
for matcher_func in matchers : matches = matcher_func ( text_log_error ) # matches : iterator of ( score , ClassifiedFailure . id ) if not matches : continue for score , classified_failure_id in matches : yield TextLogErrorMatch ( score = score , matcher_name = matcher_func . __name__ , ...
def plate_exchanger_identifier ( self ) : '''Method to create an identifying string in format ' L ' + wavelength + ' A ' + amplitude + ' B ' + chevron angle - chevron angle . Wavelength and amplitude are specified in units of mm and rounded to two decimal places .'''
s = ( 'L' + str ( round ( self . wavelength * 1000 , 2 ) ) + 'A' + str ( round ( self . amplitude * 1000 , 2 ) ) + 'B' + '-' . join ( [ str ( i ) for i in self . chevron_angles ] ) ) return s
def handle ( self , dict ) : '''Processes a vaild stats request @ param dict : a valid dictionary object'''
# format key key = "statsrequest:{stats}:{appid}" . format ( stats = dict [ 'stats' ] , appid = dict [ 'appid' ] ) self . redis_conn . set ( key , dict [ 'uuid' ] ) dict [ 'parsed' ] = True dict [ 'valid' ] = True self . logger . info ( 'Added stat request to Redis' , extra = dict )
def _kernel ( kernel_spec ) : """Expands the kernel spec into a length 2 list . Args : kernel _ spec : An integer or a length 1 or 2 sequence that is expanded to a list . Returns : A length 2 list ."""
if isinstance ( kernel_spec , tf . compat . integral_types ) : return [ kernel_spec , kernel_spec ] elif len ( kernel_spec ) == 1 : return [ kernel_spec [ 0 ] , kernel_spec [ 0 ] ] else : assert len ( kernel_spec ) == 2 return kernel_spec
def actor2ImageData ( actor , spacing = ( 1 , 1 , 1 ) ) : """Convert a mesh it into volume representation as ` ` vtkImageData ` ` where the foreground ( exterior ) voxels are 1 and the background ( interior ) voxels are 0. Internally the ` ` vtkPolyDataToImageStencil ` ` class is used . . . hint : : | mesh2...
# https : / / vtk . org / Wiki / VTK / Examples / Cxx / PolyData / PolyDataToImageData pd = actor . polydata ( ) whiteImage = vtk . vtkImageData ( ) bounds = pd . GetBounds ( ) whiteImage . SetSpacing ( spacing ) # compute dimensions dim = [ 0 , 0 , 0 ] for i in [ 0 , 1 , 2 ] : dim [ i ] = int ( np . ceil ( ( bound...
def setns ( fd , nstype ) : """Reassociate thread with a namespace : param fd int : The file descriptor referreing to one of the namespace entries in a : directory : : ` / proc / < pid > / ns / ` directory . : param nstype int : The type of namespace the calling thread should be reasscoiated with ."""
res = lib . setns ( fd , nstype ) if res != 0 : _check_error ( ffi . errno )
def _load ( self , scale = 0.001 ) : """Load the Sentinel - 2 MSI relative spectral responses"""
with open_workbook ( self . path ) as wb_ : for sheet in wb_ . sheets ( ) : if sheet . name not in SHEET_HEADERS . keys ( ) : continue plt_short_name = PLATFORM_SHORT_NAME . get ( self . platform_name ) if plt_short_name != SHEET_HEADERS . get ( sheet . name ) : conti...
def flatten ( in_list ) : """given a list of values in _ list , flatten returns the list obtained by flattening the top - level elements of in _ list ."""
out_list = [ ] for val in in_list : if isinstance ( val , list ) : out_list . extend ( val ) else : out_list . append ( val ) return out_list
def static_absolute_tag ( context , path ) : """Return the absolute URL of a static file . Usage : ` ` { % % } ` `"""
request = context . get ( "request" ) return urljoin ( request . ABSOLUTE_ROOT , static_url ( path ) )
def contract_hash_to_address ( self , contract_hash ) : """Returns address of the corresponding hash by searching the leveldb : param contract _ hash : Hash to be searched"""
if not re . match ( r"0x[a-fA-F0-9]{64}" , contract_hash ) : raise CriticalError ( "Invalid address hash. Expected format is '0x...'." ) print ( self . leveldb . contract_hash_to_address ( contract_hash ) )
def _select ( self , pointer ) : """Get a YAMLChunk referenced by a pointer ."""
return YAMLChunk ( self . _ruamelparsed , pointer = pointer , label = self . _label , strictparsed = self . _strictparsed , key_association = copy ( self . _key_association ) , )
def listen ( self ) : """Self - host using ' bind ' and ' port ' from the WSGI config group ."""
msgtmpl = ( u'Serving on host %(host)s:%(port)s' ) host = CONF . wsgi . wsgi_host port = CONF . wsgi . wsgi_port LOG . info ( msgtmpl , { 'host' : host , 'port' : port } ) server_cls = self . _get_server_cls ( host ) httpd = simple_server . make_server ( host , port , self . app , server_cls ) httpd . serve_forever ( )
def handle_token ( cls , parser , token ) : """Class method to parse get _ comment _ list / count / form and return a Node ."""
tokens = token . contents . split ( ) if tokens [ 1 ] != 'for' : raise template . TemplateSyntaxError ( "Second argument in %r tag must be 'for'" % tokens [ 0 ] ) # { % get _ whatever for obj as varname % } if len ( tokens ) == 5 : if tokens [ 3 ] != 'as' : raise template . TemplateSyntaxError ( "Third ...
def record ( self , record = True , tag = None ) : """Enable / disable recording . Return a coroutine ."""
path = '/startvideo?force=1' if record else '/stopvideo?force=1' if record and tag is not None : path = '/startvideo?force=1&tag={}' . format ( URL ( tag ) . raw_path ) return self . _request ( path )
def K_chol ( self ) : """Cholesky of the prior covariance K"""
if self . _K_chol is None : self . _K_chol = jitchol ( self . _K ) return self . _K_chol
def check_required_params ( self ) : """Check if all required parameters are set"""
for param in self . REQUIRED_FIELDS : if param not in self . params : raise ValidationError ( "Missing parameter: {} for {}" . format ( param , self . __class__ . path ) ) for child in self . TASKS : for param in child . REQUIRED_FIELDS : if param not in self . params : raise Validat...
def check ( state_engine , nameop , block_id , checked_ops ) : """Given a NAME _ IMPORT nameop , see if we can import it . * the name must be well - formed * the namespace must be revealed , but not ready * the name cannot have been imported yet * the sender must be the same as the namespace ' s sender Se...
from . . nameset import BlockstackDB name = str ( nameop [ 'name' ] ) sender = str ( nameop [ 'sender' ] ) sender_pubkey = None recipient = str ( nameop [ 'recipient' ] ) recipient_address = str ( nameop [ 'recipient_address' ] ) preorder_hash = hash_name ( nameop [ 'name' ] , sender , recipient_address ) log . debug (...
def _rnaseq_checkpoints ( samples ) : """Check sample configuration to identify required steps in analysis ."""
checkpoints = { } checkpoints [ "rnaseq" ] = True checkpoints [ "vc" ] = any ( [ dd . get_variantcaller ( d ) for d in samples ] ) return checkpoints
def _to_ctfile_bond_block ( self , key ) : """Create bond block in ` CTfile ` format . : param str key : Ctab atom block key . : return : Ctab bond block . : rtype : : py : class : ` str `"""
counter = OrderedCounter ( Bond . bond_block_format ) ctab_bond_block = '\n' . join ( [ '' . join ( [ str ( value ) . rjust ( spacing ) for value , spacing in zip ( bond . _ctab_data . values ( ) , counter . values ( ) ) ] ) for bond in self [ key ] ] ) return '{}\n' . format ( ctab_bond_block )
def unique ( _list ) : """Makes the list have unique items only and maintains the order list ( set ( ) ) won ' t provide that : type _ list list : rtype : list"""
ret = [ ] for item in _list : if item not in ret : ret . append ( item ) return ret
def valid_remainder ( cntxt : Context , n : Node , matchables : RDFGraph , S : ShExJ . Shape ) -> bool : """Let * * outs * * be the arcsOut in remainder : ` outs = remainder ∩ arcsOut ( G , n ) ` . Let * * matchables * * be the triples in outs whose predicate appears in a TripleConstraint in ` expression ` . If ...
# TODO : Update this and satisfies to address the new algorithm # Let * * outs * * be the arcsOut in remainder : ` outs = remainder ∩ arcsOut ( G , n ) ` . outs = arcsOut ( cntxt . graph , n ) . intersection ( matchables ) # predicates that in a TripleConstraint in ` expression ` predicates = predicates_in_expression (...
def make_bigint_autoincrement_column ( column_name : str , dialect : Dialect ) -> Column : """Returns an instance of : class : ` Column ` representing a : class : ` BigInteger ` ` ` AUTOINCREMENT ` ` column in the specified : class : ` Dialect ` ."""
# noinspection PyUnresolvedReferences if dialect . name == SqlaDialectName . MSSQL : return Column ( column_name , BigInteger , Sequence ( 'dummy_name' , start = 1 , increment = 1 ) ) else : # return Column ( column _ name , BigInteger , autoincrement = True ) # noinspection PyUnresolvedReferences raise Asserti...
def run_spider ( spider_cls , ** kwargs ) : """Runs a spider and returns the scraped items ( by default ) . Parameters spider _ cls : scrapy . Spider A spider class to run . capture _ items : bool ( default : True ) If enabled , the scraped items are captured and returned . return _ crawler : bool ( def...
timeout = kwargs . pop ( 'timeout' , DEFAULT_TIMEOUT ) return wait_for ( timeout , _run_spider_in_reactor , spider_cls , ** kwargs )
def context_factory ( apply_globally = False , api = None ) : """A decorator that registers a single hug context factory"""
def decorator ( context_factory_ ) : if apply_globally : hug . defaults . context_factory = context_factory_ else : apply_to_api = hug . API ( api ) if api else hug . api . from_object ( context_factory_ ) apply_to_api . context_factory = context_factory_ return context_factory_ retu...
def read ( self , module_name ) : """Read a particular config file Parameters module _ name : String The analysis _ path of the module for which a config is to be read ( priors relate one to one with configs ) ."""
self . parser . read ( "{}/{}.ini" . format ( self . path , module_name . split ( "." ) [ - 1 ] ) )
def sample ( self , data , interval ) : '''Sample a patch from the data object Parameters data : dict A data dict as produced by pumpp . Pump . transform interval : slice The time interval to sample Returns data _ slice : dict ` data ` restricted to ` interval ` .'''
data_slice = dict ( ) for key in data : if '_valid' in key : continue index = [ slice ( None ) ] * data [ key ] . ndim # if we have multiple observations for this key , pick one index [ 0 ] = self . rng . randint ( 0 , data [ key ] . shape [ 0 ] ) index [ 0 ] = slice ( index [ 0 ] , index [ ...
def get_all_groups ( self , names = None , max_records = None , next_token = None ) : """Returns a full description of each Auto Scaling group in the given list . This includes all Amazon EC2 instances that are members of the group . If a list of names is not provided , the service returns the full details of...
params = { } if max_records : params [ 'MaxRecords' ] = max_records if next_token : params [ 'NextToken' ] = next_token if names : self . build_list_params ( params , names , 'AutoScalingGroupNames' ) return self . get_list ( 'DescribeAutoScalingGroups' , params , [ ( 'member' , AutoScalingGroup ) ] )
def _get_error_message ( response ) : """Attempt to extract an error message from response body"""
try : data = response . json ( ) if "error_description" in data : return data [ 'error_description' ] if "error" in data : return data [ 'error' ] except Exception : pass return "Unknown error"
def netconf_confirmed_commit_timeout ( self , ** kwargs ) : """Auto Generated Code"""
config = ET . Element ( "config" ) netconf_confirmed_commit = ET . SubElement ( config , "netconf-confirmed-commit" , xmlns = "urn:ietf:params:xml:ns:yang:ietf-netconf-notifications" ) timeout = ET . SubElement ( netconf_confirmed_commit , "timeout" ) timeout . text = kwargs . pop ( 'timeout' ) callback = kwargs . pop ...
def path ( self , path ) : """Setter method ; for a description see the getter method ."""
# pylint : disable = attribute - defined - outside - init self . _path = copy_ . copy ( path ) # The provided path is shallow copied ; it does not have any attributes # with mutable types . # We perform this check after the initialization to avoid errors # in test tools that show the object with repr ( ) . assert isins...
def glymur_config ( ) : """Try to ascertain locations of openjp2 , openjpeg libraries . Returns tuple tuple of library handles"""
handles = ( load_openjpeg_library ( x ) for x in [ 'openjp2' , 'openjpeg' ] ) handles = tuple ( handles ) if all ( handle is None for handle in handles ) : msg = "Neither the openjp2 nor the openjpeg library could be loaded. " warnings . warn ( msg ) return handles
def _local_decode ( self ) : """Finds the index of the maximum values for all the single node dual objectives . Reference : code presented by Sontag in 2012 here : http : / / cs . nyu . edu / ~ dsontag / code / README _ v2 . html"""
# The current assignment of the single node factors is stored in the form of a dictionary decoded_result_assignment = { node : np . argmax ( self . objective [ node ] . values ) for node in self . objective if len ( node ) == 1 } # Use the original cluster _ potentials of each factor to find the primal integral value ....
def plus_replacement ( random , population , parents , offspring , args ) : """Performs " plus " replacement . This function performs " plus " replacement , which means that the entire existing population is replaced by the best population - many elements from the combined set of parents and offspring . ....
pool = list ( offspring ) pool . extend ( parents ) pool . sort ( reverse = True ) survivors = pool [ : len ( population ) ] return survivors
def all_up ( self ) : """Get the root object of this comparison . ( This is a convenient wrapper for following the up attribute as often as you can . ) : rtype : DiffLevel"""
level = self while level . up : level = level . up return level
def dump ( self , obj , fp ) : """Serializes obj as an avro - format byte stream to the provided fp file - like object stream ."""
if not validate ( obj , self . _raw_schema ) : raise AvroTypeException ( self . _avro_schema , obj ) fastavro_write_data ( fp , obj , self . _raw_schema )
def safe_makedirs ( path , uid = - 1 , gid = - 1 ) : """create path recursively if it doesn ' t exist"""
try : os . makedirs ( path ) except OSError as e : if e . errno == errno . EEXIST : pass else : raise else : os . chown ( path , uid , gid )
def _construct_control_flow_slice ( self , simruns ) : """Build a slice of the program without considering the effect of data dependencies . This is an incorrect hack , but it should work fine with small programs . : param simruns : A list of SimRun targets . You probably wanna get it from the CFG somehow . It ...
# TODO : Support context - sensitivity ! if self . _cfg is None : l . error ( 'Please build CFG first.' ) cfg = self . _cfg . graph for simrun in simruns : if simrun not in cfg : l . error ( 'SimRun instance %s is not in the CFG.' , simrun ) stack = [ ] for simrun in simruns : stack . append ( simru...
def filter ( filter_creator ) : """Creates a decorator that can be used as a filter . . . warning : : This is currently not compatible with most other decorators , if you are using a decorator that isn ' t part of ` hurler ` you should take caution ."""
filter_func = [ None ] def function_getter ( function ) : if isinstance ( function , Filter ) : function . add_filter ( filter ) return function else : return Filter ( filter = filter_func [ 0 ] , callback = function , ) def filter_decorator ( * args , ** kwargs ) : filter_function =...
def to_type ( value , ptype ) : """Convert value to ptype"""
if ptype == 'str' : return str ( value ) elif ptype == 'int' : return int ( value ) elif ptype == 'float' : return float ( value ) elif ptype == 'bool' : if value . lower ( ) == 'true' : return True elif value . lower ( ) == 'false' : return False raise ValueError ( 'Bad bool val...
def _extract_bitstrings ( ro_sources : List [ Optional [ Tuple [ int , int ] ] ] , buffers : Dict [ str , np . ndarray ] ) -> np . ndarray : """De - mux qubit readout results and assemble them into the ro - bitstrings in the correct order . : param ro _ sources : Specification of the ro _ sources , cf : py : fu...
# hack to extract num _ shots indirectly from the shape of the returned data first , * rest = buffers . values ( ) num_shots = first . shape [ 0 ] bitstrings = np . zeros ( ( num_shots , len ( ro_sources ) ) , dtype = np . int64 ) for col_idx , src in enumerate ( ro_sources ) : if src : qubit , meas_idx = s...
def json_qry ( dataset , qry_str , params = { } ) : """Takes a json query string and returns the results args : dataset : RdfDataset to query against qry _ str : query string params : dictionary of params"""
# if qry _ str . startswith ( " $ . bf _ itemOf [ rdf _ type = bf _ Print ] . = ' print ' , \ n " ) : # pdb . set _ trace ( ) if not '$' in qry_str : qry_str = "." . join ( [ '$' , qry_str . strip ( ) ] ) dallor_val = params . get ( "$" , dataset ) if isinstance ( dallor_val , rdflib . URIRef ) : dallor_val = U...
def setXr ( self , Xr ) : """set genotype data of the set component"""
self . Xr = Xr self . gp_block . covar . G = Xr
def unset_stack_address_mapping ( self , absolute_address ) : """Remove a stack mapping . : param absolute _ address : An absolute memory address , which is the base address of the stack frame to destroy ."""
if self . _stack_region_map is None : raise SimMemoryError ( 'Stack region map is not initialized.' ) self . _stack_region_map . unmap_by_address ( absolute_address )
def hardware_version ( self ) : """Return the embedded hardware version string for this tile . The hardware version is an up to 10 byte user readable string that is meant to encode any necessary information about the specific hardware that this tile is running on . For example , if you have multiple assembl...
res = self . rpc ( 0x00 , 0x02 , result_type = ( 0 , True ) ) # Result is a string but with zero appended to the end to make it a fixed 10 byte size binary_version = res [ 'buffer' ] ver = "" for x in binary_version : if x != 0 : ver += chr ( x ) return ver
def _find_volumes ( self , volume_system , vstype = 'detect' ) : """Finds all volumes based on the pytsk3 library ."""
try : # noinspection PyUnresolvedReferences import pytsk3 except ImportError : logger . error ( "pytsk3 not installed, could not detect volumes" ) raise ModuleNotFoundError ( "pytsk3" ) baseimage = None try : # ewf raw image is now available on base mountpoint # either as ewf1 file or as . dd file raw_p...
def write_version_file ( self , version_file_path , tstamp , svnpath , svnrev , version ) : """Args : version _ file _ path : tstamp : svnpath : svnrev : version :"""
txt = """# This file is automatically generated. Manual edits will be erased. # When this file was generated TIMESTAMP="{}" # Path of the schema used in the repository SVNPATH="{1}" # SVN revision of the schema that was used SVNREVISION="{2}" # The version tag of the schema VERSION="{3}" """ . format ( tsta...
def _login ( self , username , password , client_id , client_secret ) : """Performs login with the provided credentials"""
url = self . api_url + self . auth_token_url auth_string = '%s:%s' % ( client_id , client_secret ) authorization = base64 . b64encode ( auth_string . encode ( ) ) . decode ( ) headers = { 'Authorization' : "Basic " + authorization , 'Content-Type' : "application/x-www-form-urlencoded" } params = { 'username' : str ( us...
def jac ( x , a ) : """Jacobian matrix given Christophe ' s suggestion of f"""
return ( x - a ) / np . sqrt ( ( ( x - a ) ** 2 ) . sum ( 1 ) ) [ : , np . newaxis ]
def cmd_dropobject ( self , obj ) : '''drop an object on the map'''
latlon = self . module ( 'map' ) . click_position if self . last_click is not None and self . last_click == latlon : return self . last_click = latlon if latlon is not None : obj . setpos ( latlon [ 0 ] , latlon [ 1 ] ) self . aircraft . append ( obj )
def _serialize ( self , value , attr , obj ) : """Convert the Arrow object into a string ."""
if isinstance ( value , arrow . arrow . Arrow ) : value = value . datetime return super ( ArrowField , self ) . _serialize ( value , attr , obj )
def attach_video ( self , video : typing . Union [ InputMediaVideo , base . InputFile ] , thumb : typing . Union [ base . InputFile , base . String ] = None , caption : base . String = None , width : base . Integer = None , height : base . Integer = None , duration : base . Integer = None ) : """Attach video : pa...
if not isinstance ( video , InputMedia ) : video = InputMediaVideo ( media = video , thumb = thumb , caption = caption , width = width , height = height , duration = duration ) self . attach ( video )
def rollback ( self ) : """It will rollback all changes and go to the * original _ config *"""
logger . info ( 'Rolling back changes' ) config_text = self . compare_config ( other = self . original_config ) if len ( config_text ) > 0 : return self . _commit ( config_text , force = True , reload_original_config = False )
def timing ( self , stat , time , sample_rate = 1 ) : """Log timing information for a single stat > > > statsd _ client . timing ( ' some . time ' , 500)"""
stats = { stat : "%f|ms" % time } self . send ( stats , sample_rate )
def fetch_events ( cursor , config , account_name ) : """Generator that returns the events"""
query = config [ 'indexer' ] . get ( 'query' , 'select * from events where user_agent glob \'*CloudCustodian*\'' ) for event in cursor . execute ( query ) : event [ 'account' ] = account_name event [ '_index' ] = config [ 'indexer' ] [ 'idx_name' ] event [ '_type' ] = config [ 'indexer' ] . get ( 'idx_type'...
def browse ( parent , filename = '' ) : """Creates a new XdkWidnow for browsing an XDK file . : param parent | < QWidget > filename | < str >"""
dlg = XdkWindow ( parent ) dlg . show ( ) if ( filename ) : dlg . loadFilename ( filename )
def authenticate_db ( self , db , dbname , retry = True ) : """Returns True if we manage to auth to the given db , else False ."""
log_verbose ( "Server '%s' attempting to authenticate to db '%s'" % ( self . id , dbname ) ) login_user = self . get_login_user ( dbname ) username = None password = None auth_success = False if login_user : username = login_user [ "username" ] if "password" in login_user : password = login_user [ "pass...
def _delta_time ( self , date_time ) : """Returns in a dict the number of days / hours / minutes and total minutes until date _ time ."""
now = datetime . datetime . now ( tzlocal ( ) ) diff = date_time - now days = int ( diff . days ) hours = int ( diff . seconds / 3600 ) minutes = int ( ( diff . seconds / 60 ) - ( hours * 60 ) ) + 1 total_minutes = int ( ( diff . seconds / 60 ) + ( days * 24 * 60 ) ) + 1 return { "days" : days , "hours" : hours , "minu...
def from_sequence ( cls , seq ) : """Create and return a new ` ` Point ` ` instance from any iterable with 0 to 3 elements . The elements , if present , must be latitude , longitude , and altitude , respectively ."""
args = tuple ( islice ( seq , 4 ) ) if len ( args ) > 3 : raise ValueError ( 'When creating a Point from sequence, it ' 'must not have more than 3 items.' ) return cls ( * args )
def parse_headers ( self , req , name , field ) : """Pull a header value from the request ."""
# Use req . get _ headers rather than req . headers for performance return req . get_header ( name , required = False ) or core . missing
def write_classdesc ( self , obj , parent = None ) : """Writes a class description : param obj : Class description to write : param parent :"""
if obj not in self . references : # Add reference self . references . append ( obj ) logging . debug ( "*** Adding ref 0x%X for classdesc %s" , len ( self . references ) - 1 + self . BASE_REFERENCE_IDX , obj . name , ) self . _writeStruct ( ">B" , 1 , ( self . TC_CLASSDESC , ) ) self . _writeString ( ob...
def query_topology_db ( self , dict_convert = False , ** req ) : """Query an entry to the topology DB ."""
session = db . get_session ( ) with session . begin ( subtransactions = True ) : try : # Check if entry exists . topo_disc = session . query ( DfaTopologyDb ) . filter_by ( ** req ) . all ( ) except orm_exc . NoResultFound : LOG . info ( "No Topology results found for %s" , req ) return ...
def tail ( collection , filter = None , projection = None , limit = 0 , timeout = None , aggregate = False ) : """A generator which will block and yield entries as they are added to a capped collection . Only use this on capped collections ; behaviour is undefined against non - tailable cursors . Accepts a timeou...
if not collection . options ( ) . get ( 'capped' , False ) : raise TypeError ( "Can only tail capped collections." ) # Similarly , verify that the collection isn ' t empty . Empty is bad . ( Busy loop . ) if not collection . count ( ) : raise ValueError ( "Cowardly refusing to tail an empty collection." ) curso...
def make_inst2 ( ) : """creates example data set 2"""
I , d = multidict ( { 1 : 45 , 2 : 20 , 3 : 30 , 4 : 30 } ) # demand J , M = multidict ( { 1 : 35 , 2 : 50 , 3 : 40 } ) # capacity c = { ( 1 , 1 ) : 8 , ( 1 , 2 ) : 9 , ( 1 , 3 ) : 14 , # { ( customer , factory ) : cost < float > } ( 2 , 1 ) : 6 , ( 2 , 2 ) : 12 , ( 2 , 3 ) : 9 , ( 3 , 1 ) : 10 , ( 3 , 2 ) : 13 , ( 3 ,...
def _configure_app ( app_ ) : """Configure the Flask WSGI app ."""
app_ . url_map . strict_slashes = False app_ . config . from_object ( default_settings ) app_ . config . from_envvar ( 'JOB_CONFIG' , silent = True ) db_url = app_ . config . get ( 'SQLALCHEMY_DATABASE_URI' ) if not db_url : raise Exception ( 'No db_url in config' ) app_ . wsgi_app = ProxyFix ( app_ . wsgi_app ) gl...
def _indices ( self ) : """Find the path _ index and node _ index that identify the given node ."""
path = self . parent layer = path . parent for path_index in range ( len ( layer . paths ) ) : if path == layer . paths [ path_index ] : for node_index in range ( len ( path . nodes ) ) : if self == path . nodes [ node_index ] : return Point ( path_index , node_index ) return Non...
def petl ( self , * args , ** kwargs ) : """Return a PETL source object"""
import petl t = self . resolved_url . get_resource ( ) . get_target ( ) if t . target_format == 'txt' : return petl . fromtext ( str ( t . fspath ) , * args , ** kwargs ) elif t . target_format == 'csv' : return petl . fromcsv ( str ( t . fspath ) , * args , ** kwargs ) else : raise Exception ( "Can't handl...
def remove_entry_listener ( self , registration_id ) : """Removes the specified entry listener . Returns silently if there is no such listener added before . : param registration _ id : ( str ) , id of registered listener . : return : ( bool ) , ` ` true ` ` if registration is removed , ` ` false ` ` otherwise ...
return self . _stop_listening ( registration_id , lambda i : replicated_map_remove_entry_listener_codec . encode_request ( self . name , i ) )
def get_enabled_hook_plugins ( self , hook , args , ** kwargs ) : """Get enabled plugins for specified hook name ."""
manager = self . hook_managers [ hook ] if len ( list ( manager ) ) == 0 : return [ ] return [ plugin for plugin in manager . map ( self . _create_hook_plugin , args , ** kwargs ) if plugin is not None ]
def clean_text ( self , number , countries = None , country = None , ** kwargs ) : """Parse a phone number and return in international format . If no valid phone number can be detected , None is returned . If a country code is supplied , this will be used to infer the prefix . https : / / github . com / dav...
for code in self . _clean_countries ( countries , country ) : try : num = parse_number ( number , code ) if is_possible_number ( num ) : if is_valid_number ( num ) : return format_number ( num , PhoneNumberFormat . E164 ) except NumberParseException : pass
def get ( self , url , store_on_error = False , xpath = None , rate_limit = None , log_hits = True , log_misses = True ) : """Get a URL via the cache . If the URL exists in the cache , return the cached value . Otherwise perform the request , store the resulting content in the cache and return it . Throws a :...
try : # get cached request - if none is found , this throws a NoResultFound exception cached = self . _query ( url , xpath ) . one ( ) if log_hits : config . logger . info ( "Request cache hit: " + url ) # if the cached value is from a request that resulted in an error , throw an exception if ca...
def clone ( self , screen , scene ) : """Create a clone of this Dialog into a new Screen . : param screen : The new Screen object to clone into . : param scene : The new Scene object to clone into ."""
# Only clone the object if the function is safe to do so . if self . _on_close is None or isfunction ( self . _on_close ) : scene . add_effect ( PopUpDialog ( screen , self . _text , self . _buttons , self . _on_close ) )
def reserve_position ( fp , fmt = 'I' ) : """Reserves the current position for write . Use with ` write _ position ` . : param fp : file - like object : param fmt : format of the reserved position : return : the position"""
position = fp . tell ( ) fp . seek ( struct . calcsize ( str ( '>' + fmt ) ) , 1 ) return position
def filter_mc_sharemem ( filename , step_size , box_size , cores , shape , nslice = None , domask = True ) : """Calculate the background and noise images corresponding to the input file . The calculation is done via a box - car approach and uses multiple cores and shared memory . Parameters filename : str F...
if cores is None : cores = multiprocessing . cpu_count ( ) if ( nslice is None ) or ( cores == 1 ) : nslice = cores img_y , img_x = shape # initialise some shared memory global ibkg # bkg = np . ctypeslib . as _ ctypes ( np . empty ( shape , dtype = np . float32 ) ) # ibkg = multiprocessing . sharedctypes . Arr...
def pick_input_v1 ( self ) : """Updates | Input | based on | Total | ."""
flu = self . sequences . fluxes . fastaccess inl = self . sequences . inlets . fastaccess flu . input = 0. for idx in range ( inl . len_total ) : flu . input += inl . total [ idx ] [ 0 ]
def CryptUnprotectData ( data , optional_entropy = None , prompt_struct = None , flags = 0 ) : """Returns a tuple of ( description , data ) where description is the the description that was passed to the CryptProtectData call and data is the decrypted result ."""
data_in = DATA_BLOB ( data ) entropy = DATA_BLOB ( optional_entropy ) if optional_entropy else None data_out = DATA_BLOB ( ) ptr_description = wintypes . LPWSTR ( ) res = _CryptUnprotectData ( data_in , ctypes . byref ( ptr_description ) , entropy , None , # reserved prompt_struct , flags | CRYPTPROTECT_UI_FORBIDDEN , ...
def trim_core ( self ) : """This method trims a previously extracted unsatisfiable core at most a given number of times . If a fixed point is reached before that , the method returns ."""
for i in range ( self . trim ) : # call solver with core assumption only # it must return ' unsatisfiable ' self . oracle . solve ( assumptions = self . core ) # extract a new core new_core = self . oracle . get_core ( ) if len ( new_core ) == len ( self . core ) : # stop if new core is not better than ...
def load_data_file ( fname , directory = None , force_download = False ) : """Get a standard vispy demo data file Parameters fname : str The filename on the remote ` ` demo - data ` ` repository to download , e . g . ` ` ' molecular _ viewer / micelle . npy ' ` ` . These correspond to paths on ` ` https :...
_url_root = 'http://github.com/vispy/demo-data/raw/master/' url = _url_root + fname if directory is None : directory = config [ 'data_path' ] if directory is None : raise ValueError ( 'config["data_path"] is not defined, ' 'so directory must be supplied' ) fname = op . join ( directory , op . normcase (...
def placeholder ( type_ ) : """Returns the EmptyVal instance for the given type"""
typetuple = type_ if isinstance ( type_ , tuple ) else ( type_ , ) if any in typetuple : typetuple = any if typetuple not in EMPTY_VALS : EMPTY_VALS [ typetuple ] = EmptyVal ( typetuple ) return EMPTY_VALS [ typetuple ]
def _set_folium_map ( self ) : """A map containing only the feature ."""
m = Map ( features = [ self ] , width = self . _width , height = self . _height ) self . _folium_map = m . draw ( )
def _get_xml_version ( element ) : """Extracts a list of versions that an xml element references . Returns a [ 1 ] list if there isn ' t a versions attribute ."""
if "versions" in element . attrib : result = [ int ( v ) for v in re . split ( ",\s*" , element . attrib [ "versions" ] ) ] else : result = [ 1 ] return result
def encode_exception ( exception ) : """Encode exception to a form that can be passed around and serialized . This will grab the stack , then strip off the last two calls which are encode _ exception and the function that called it ."""
import sys return AsyncException ( unicode ( exception ) , exception . args , sys . exc_info ( ) , exception )
def is_full ( cm , nodes1 , nodes2 ) : """Test connectivity of one set of nodes to another . Args : cm ( ` ` np . ndarrray ` ` ) : The connectivity matrix nodes1 ( tuple [ int ] ) : The nodes whose outputs to ` ` nodes2 ` ` will be tested . nodes2 ( tuple [ int ] ) : The nodes whose inputs from ` ` nodes1...
if not nodes1 or not nodes2 : return True cm = cm [ np . ix_ ( nodes1 , nodes2 ) ] # Do all nodes have at least one connection ? return cm . sum ( 0 ) . all ( ) and cm . sum ( 1 ) . all ( )
def start ( self , stages = None ) : """Makes the ` ` Piper ` ` ready to return results . This involves starting the the provided ` ` NuMap ` ` instance . If multiple ` ` Pipers ` ` share a ` ` NuMap ` ` instance the order in which these ` ` Pipers ` ` are started is important . The valid order is upstream be...
# defaults differ linear vs . parallel stages = stages or ( ( 0 , ) if self . imap is imap else ( 0 , 1 , 2 ) ) if not self . connected : self . log . error ( 'Piper %s is not connected.' % self ) raise PiperError ( 'Piper %s is not connected.' % self ) if not self . started : if 0 in stages : self ...
def _choose_dialect ( dialects ) : """Given a list of dialects , choose the one to use as the " canonical " version . If ` dialects ` is an empty list , then use the default GFF3 dialect Parameters dialects : iterable iterable of dialect dictionaries Returns dict"""
# NOTE : can use helpers . dialect _ compare if you need to make this more # complex . . . . # For now , this function favors the first dialect , and then appends the # order of additional fields seen in the attributes of other lines giving # priority to dialects that come first in the iterable . if len ( dialects ) ==...
def by_col ( cls , df , e , b , inplace = False , ** kwargs ) : """Compute smoothing by columns in a dataframe . Parameters df : pandas . DataFrame a dataframe containing the data to be smoothed e : string or list of strings the name or names of columns containing event variables to be smoothed b : st...
if not inplace : new = df . copy ( ) cls . by_col ( new , e , b , inplace = True , ** kwargs ) return new if isinstance ( e , str ) : e = [ e ] if isinstance ( b , str ) : b = [ b ] if len ( b ) == 1 and len ( e ) > 1 : b = b * len ( e ) try : assert len ( e ) == len ( b ) except AssertionEr...
def query_orders ( self , accounts , status = 'filled' ) : """查询订单 Arguments : accounts { [ type ] } - - [ description ] Keyword Arguments : status { str } - - ' open ' 待成交 ' filled ' 成交 ( default : { ' filled ' } ) Returns : [ type ] - - [ description ]"""
try : data = self . call ( "orders" , { 'client' : accounts , 'status' : status } ) if data is not None : orders = data . get ( 'dataTable' , False ) order_headers = orders [ 'columns' ] if ( '成交状态' in order_headers or '状态说明' in order_headers ) and ( '备注' in order_headers ) : ...
def dragMoveEvent ( self , event ) : """Processes the drag drop event using the filter set by the \ setDragDropFilter : param event | < QDragEvent >"""
filt = self . dragDropFilter ( ) if ( not filt ) : super ( XCalendarWidget , self ) . dragMoveEvent ( event ) return filt ( self , event )
def run_evolution ( path , name , E0 , laser_frequencies , N_iter , dt , N_states , spectrum_of_laser = None , N_delta = None , frequency_step = None , frequency_end = None , rho0 = None , print_steps = False , integrate = False , save_systems = False , save_eigenvalues = False , rk4 = False , use_netcdf = True ) : ...
def py2f_bool ( bool_var ) : if bool_var : return ".true.\n" else : return ".false.\n" if rk4 : return run_rk4 ( path , name , E0 , laser_frequencies , N_iter , dt , N_states , spectrum_of_laser = spectrum_of_laser , N_delta = N_delta , frequency_step = frequency_step , frequency_end = frequ...
def mul ( self , x , axis ) : """Function to multiply 3D View with vector or 2D array ( type = numpy . ndarray or 2D Field or 2D View ) or 2D View with vector ( type = numpy . ndarray ) : param x : array ( 1D , 2D ) or field ( 2D ) or View ( 2D ) : param axis : specifies axis , eg . axis = ( 1,2 ) plane lies in...
return self . __array_op ( operator . mul , x , axis )
def maybe_rate_limit ( client , headers , atexit = False ) : """Optionally pause the process based on suggested rate interval ."""
# pylint : disable = fixme # pylint : disable = global - statement # FIXME : Yes , I know this is not great . We ' ll fix it later . : - ) global LAST_CLIENT , LAST_HEADERS if LAST_CLIENT and LAST_HEADERS : # Wait based on previous client / headers rate_limit ( LAST_CLIENT , LAST_HEADERS , atexit = atexit ) LAST_CL...
def crop ( self , lat , lon , var ) : """Crop a subset of the dataset for each var Given doy , depth , lat and lon , it returns the smallest subset that still contains the requested coordinates inside it . It handels special cases like a region around greenwich and the international date line . Accepts 0 ...
dims , idx = cropIndices ( self . dims , lat , lon ) subset = { } for v in var : subset = { v : self . ncs [ 0 ] [ v ] [ idx [ 'yn' ] , idx [ 'xn' ] ] } return subset , dims
def get ( self , name ) : """Retrieve a plugin by name ."""
try : return self . plugins [ name ] except KeyError : raise RuntimeError ( "plugin {} does not exist" . format ( name ) )
def build_from_paths ( paths : List [ str ] , num_words : Optional [ int ] = None , min_count : int = 1 , pad_to_multiple_of : Optional [ int ] = None ) -> Vocab : """Creates vocabulary from paths to a file in sentence - per - line format . A sentence is just a whitespace delimited list of tokens . Note that spec...
with ExitStack ( ) as stack : logger . info ( "Building vocabulary from dataset(s): %s" , paths ) files = ( stack . enter_context ( utils . smart_open ( path ) ) for path in paths ) return build_vocab ( chain ( * files ) , num_words , min_count , pad_to_multiple_of )
def traverse ( fn , expr , type = ir . Expr , container = Stack ) : """Utility for generic expression tree traversal Parameters fn : Callable [ [ ir . Expr ] , Tuple [ Union [ Boolean , Iterable ] , Any ] ] This function will be applied on each expressions , it must return a tuple . The first element of the...
args = expr if isinstance ( expr , collections . abc . Iterable ) else [ expr ] todo = container ( arg for arg in args if isinstance ( arg , type ) ) seen = set ( ) while todo : expr = todo . get ( ) op = expr . op ( ) if op in seen : continue else : seen . add ( op ) control , resul...
def remove ( self , fact ) : """Create an INVALID token and send it to all children ."""
token = Token . invalid ( fact ) MATCHER . debug ( "<BusNode> added %r" , token ) for child in self . children : child . callback ( token )
def get_total_size_of_queued_replicas ( ) : """Return the total number of bytes of requested , unprocessed replicas ."""
return ( d1_gmn . app . models . ReplicationQueue . objects . filter ( local_replica__info__status__status = 'queued' ) . aggregate ( Sum ( 'size' ) ) [ 'size__sum' ] or 0 )
def get_by_request_id ( env , request_id ) : """Search for event logs by request id"""
mgr = SoftLayer . NetworkManager ( env . client ) logs = mgr . get_event_logs_by_request_id ( request_id ) table = formatting . Table ( COLUMNS ) table . align [ 'metadata' ] = "l" for log in logs : metadata = json . dumps ( json . loads ( log [ 'metaData' ] ) , indent = 4 , sort_keys = True ) table . add_row (...
def logline_timestamp_comparator ( t1 , t2 ) : """Comparator for timestamps in logline format . Args : t1 : Timestamp in logline format . t2 : Timestamp in logline format . Returns : -1 if t1 < t2 ; 1 if t1 > t2 ; 0 if t1 = = t2."""
dt1 = _parse_logline_timestamp ( t1 ) dt2 = _parse_logline_timestamp ( t2 ) for u1 , u2 in zip ( dt1 , dt2 ) : if u1 < u2 : return - 1 elif u1 > u2 : return 1 return 0