Datasets:
Tasks:
Tabular Classification
Modalities:
Text
Formats:
csv
Languages:
English
Size:
100K - 1M
Tags:
cheminformatics
virtual-screening
ligand-based-screening
molecular-similarity
drug-discovery
benchmark
License:
| { | |
| "target_id": "dpp4", | |
| "random_state": 3, | |
| "uniprot_ids": [ | |
| "P14740", | |
| "P22411", | |
| "P27487", | |
| "P28843" | |
| ], | |
| "pfam_ids": [ | |
| "PF00930", | |
| "PF00326" | |
| ], | |
| "split_mode": "butina_representatives", | |
| "split_kwargs": { | |
| "max_total_actives": 1000, | |
| "known_frac": 0.1, | |
| "known_min": 10, | |
| "known_max": 200, | |
| "test_to_known_ratio": 10, | |
| "test_min": 50, | |
| "test_max": 1000, | |
| "nontrivial_tanimoto_cutoff": 0.8, | |
| "fallback_if_short": "allow_short", | |
| "random_state": 3, | |
| "butina_cutoff": 0.8, | |
| "butina_radius": 2, | |
| "butina_nbits": 1024 | |
| }, | |
| "min_known_for_eval": 50, | |
| "source_file": "resultados_EF_repeticiones_con_inactivos_10_90/seed_3/unknown_active_sets_by_target.csv", | |
| "putative_inactives": { | |
| "scope": "per_random_state", | |
| "path": "dpp4/random_state_3/putative_inactives.csv", | |
| "derivation": "pool_ids excluding evaluation_actives", | |
| "sha256_ids": "601e9f7e93223080a87794d4408408f4db775bbcab1ee1eb41979b832c1028d4" | |
| }, | |
| "pool_negative_sampling": { | |
| "source": "pool_ids from unknown_active_sets_by_target.csv", | |
| "original_function": "build_eval_pool_ids", | |
| "ratio_neg_to_pos": 200, | |
| "random_state": 0, | |
| "n_bg_cap": null | |
| }, | |
| "counts": { | |
| "n_active_total_raw": 1933, | |
| "n_inactive_total_raw": 994863, | |
| "n_known_actives": 82, | |
| "n_evaluation_actives": 743, | |
| "n_pool_evaluation_actives": 743, | |
| "n_putative_inactives": 148600 | |
| } | |
| } | |