Gene symbol,Ranking,Annotation & reasoning,Additional note,Data Source
TCL1A,1-50,B cell,,"""Identification and multimodal characterization of a specialized epithelial cell type associated with Crohn’s disease"", CD samples collected from terminal ileum (TI) and ascending colon (AC) through endoscopy and surgical"
MS4A1,1-50,B cell,,
CD79A,1-50,B cell,,
BLK,50-100,B cell,,
FCRL1,50-100,B cell,,
PAX5,50-100,B cell,,
TNFRSF13C,50-100,B cell,,
CNR2,50-100,B cell,,
CD22,50-100,B cell,Mast,
FAM129C,100-150,B cell,,
VPREB3,100-150,B cell,,
BEST4,1-50,BEST4,Canonical marker,
CA7,1-50,BEST4,Canonical marker,
OTOP2,1-50,BEST4,Canonical marker,
CA4,50-100,BEST4,Co-exp with CA7,
NBPF19,50-100,BEST4,,
NBPF14,50-100,BEST4,,
MEIS1,100-150,BEST4,,
ADCY5,100-150,BEST4,,
SPIB,100-150,BEST4,,
AQP8,1-50,Clonocyte,,
CEACAM1,1-50,Clonocyte,,
AQP8,1-50,Colonocyte,,
CA2,50-100,Colonocyte,Multiple cell types,
CA1,50-100,Colonocyte,,
HMGCS2,50-100,Colonocyte,Multiple cell types,
CD24,50-100,Colonocyte,Multiple cell types,
MS4A12,100-150,Colonocyte,,
SLC37A2,100-150,Colonocyte,,
CEACAM7,100-150,Colonocyte,,
SLC26A2,100-150,Colonocyte,,
TOP2A,1-50,Cycling,,
MKI67,1-50,Cycling,,
HMGB2,50-100,Cycling,,
OLFM4,1-50,Cycling/Stem,,
CENPF,50-100,Cycling/Stem,,
PRC1,50-100,Cycling/Stem,,
CCNB2,50-100,Cycling/Stem,,
AURKB,100-150,Cycling/Stem,,
GTSE1,100-150,Cycling/Stem,,
RRM2,100-150,Cycling/Stem,,
CHGB,1-50,EEC,,
CHGA,1-50,EEC,,
PCSK1N,50-100,EEC,,
KCNB2,50-100,EEC,,
NEUROD1,50-100,EEC,,
FEV,100-150,EEC,,
SCG2,100-150,EEC,,
SSTR5-AS1,100-150,EEC,,
ACKR1,1-50,Endo,Vein,
VWF,1-50,Endo,Cannonical endo marker,
PECAM1,1-50,Endo,Canonical marker,
CLDN5,50-100,Endo,,
SOX18,50-100,Endo,,
RAMP3,50-100,Endo,,
RAMP2,50-100,Endo,,
CLEC14A,100-150,Endo,,
TIE1,100-150,Endo,,
APOB,1-50,Enterocyte,Multiple cell types,
APOA4,1-50,Enterocyte,Multiple cell types,
APOA1,1-50,Enterocyte,,
SLC15A1,50-100,Enterocyte,,
SLC6A19,50-100,Enterocyte,,
CYP3A4,100-150,Enterocyte,,
MTTP,100-150,Enterocyte,,
CUBN,100-150,Enterocyte,,
SLC10A2,100-150,Enterocyte,,
SLC7A9,100-150,Enterocyte,,
FABP1,1-50,Epi,Multiple cell types,
COL1A2,1-50,Fibro,"Canonical marker, high expression",
COL1A1,1-50,Fibro,"Canonical marker, high expression",
DCN,1-50,Fibro,"Canonical marker, high expression",
COL3A1,50-100,Fibro,,
PDGFRA,50-100,Fibro,,
MFAP4,50-100,Fibro,,
SFRP2,50-100,Fibro,,
C1R,100-150,Fibro,,
TFF3,1-50,Goblet,"Canonical marker, high expression",
MUC2,1-50,Goblet,"Canonical marker, high expression",
SPINK4,1-50,Goblet,,
ITLN1,50-100,Goblet,,
CLCA1,50-100,Goblet,,
FCGBP,50-100,Goblet,,
BEST2,100-150,Goblet,,
DUOX2,1-50,LND,Important cell state in disease,
LCN2,1-50,LND,Important cell state in disease,
DMBT1,1-50,LND,Important cell state in disease,
REG1A,1-50,LND,Important cell state in disease,
SAA1,50-100,LND,,
NOS2,50-100,LND,,
PI3,100-150,LND,,
PDZK1IP1,100-150,LND,,
CD55,100-150,LND,,
CPA3,1-50,Mast,,
KIT,1-50,Mast,,
CTSG,50-100,Mast,,
GATA2,50-100,Mast,,
TPSAB1,50-100,Mast,,
TPSB2,50-100,Mast,,
MS4A2,100-150,Mast,,
HDC,100-150,Mast,,
C1QA,1-50,Myel,"Canonical myeloid marker, too high expression",
C1QB,1-50,Myel,Canonical myeloid marker,
C1QC,50-100,Myel,Canonical myeloid marker; co-express with C1QA and C1QB,
CSF3R,50-100,Myel,,
FPR1,100-150,Myel,,
MS4A6A,100-150,Myel,,
TYROBP,100-150,Myel,,
AIF1,100-150,Myel,,
MS4A7,100-150,Myel,,
CSF2RA,100-150,Myel,,
S100A8,1-50,Neutrophils,,
S100A9,1-50,Neutrophils,,
NKG7,1-50,NK,,
DEFA6,1-50,Paneth,,
DEFA5,50-100,Paneth,,
ITLN2,100-150,Paneth,,
PLA2G2A,100-150,Paneth,,
CDKN1C,100-150,Paneth,,
IGHA1,1-50,PCs,,
JCHAIN,1-50,PCs,,
IGHA2,1-50,PCs,,
IGKC,50-100,PCs,"Canonical marker, multiple cell types, too high expression",
CCR10,50-100,PCs,,
MZB1,50-100,PCs,,
DERL3,100-150,PCs,,
TNFRSF17,100-150,PCs,,
AC096579.15,100-150,PCs,,
ENAM,100-150,PCs,,
LGR5,1-50,Stem,,
CD3D,1-50,T,,
CD8A,1-50,T,,
TRAC,1-50,T,,
FOXP3,1-50,T,Tregs,
CTLA4,1-50,T,,
GZMB,1-50,T,T-cyto,
CD4,50-100,T,,
CCL5,50-100,T,,
CD3E,50-100,T,,
CD247,100-150,T,,
TRBC1,100-150,T,,
AC092580.4,100-150,T,,
CD96,100-150,T,,
LRMP,1-50,Tuft,,
POU2F3,50-100,Tuft,,
HPGDS,50-100,Tuft,,
SH2D6,100-150,Tuft,,
CCDC129,100-150,Tuft,,
SH2D7,100-150,Tuft,,
PTGS1,100-150,Tuft,,