Unnamed: 0,Gene.Symbol,Ranking,Annotation...reasoning,Additional.note
1,FSTL4,1-50,More distinct marker than L5,markers ranked with cohen mean
2,SATB2,1-50,abundant marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean
3,KCNIP4,1-50,abundant marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean
4,TAFA1,1-50,abundant marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean
5,VAT1L,1-50,abundant marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean
6,CBLN2,1-50,abundant marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean
7,ARPP21,1-50,abundant marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean
8,RAD52,1-50,abundant marker for astrocyte of the cerebral cortex,markers ranked with cohen mean
9,PDK4,1-50,abundant marker for astrocyte of the cerebral cortex,markers ranked with cohen mean
10,SEMA3B,1-50,abundant marker for astrocyte of the cerebral cortex,markers ranked with cohen mean
11,ADARB2,1-50,abundant marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean
12,SORCS3,1-50,abundant marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean
13,CXCL14,1-50,abundant marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean
14,MAD1L1,1-50,abundant marker for cerebral cortex endothelial cell,markers ranked with cohen mean
15,CYP26B1,1-50,abundant marker for cerebral cortex endothelial cell,markers ranked with cohen mean
16,CASP10,1-50,abundant marker for cerebral cortex endothelial cell,markers ranked with cohen mean
17,ZNF536,1-50,abundant marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean
18,ZNF385D,1-50,abundant marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean
19,THSD7A,1-50,abundant marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean
20,SEMA3E,1-50,abundant marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean
21,EGFEM1P,1-50,abundant marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean
22,LAMP5,1-50,abundant marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean
23,FGF13,1-50,abundant marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean
24,C1orf112,1-50,abundant marker for microglial cell,markers ranked with cohen mean
25,CEACAM21,1-50,abundant marker for microglial cell,markers ranked with cohen mean
26,TYROBP,1-50,abundant marker for microglial cell,markers ranked with cohen mean
27,TSHZ2,1-50,abundant marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean
28,HTR2C,1-50,abundant marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean
29,GCFC2,1-50,abundant marker for oligodendrocyte,markers ranked with cohen mean
30,LAMP2,1-50,abundant marker for oligodendrocyte,markers ranked with cohen mean
31,TMEM98,1-50,abundant marker for oligodendrocyte,markers ranked with cohen mean
32,HECW1,1-50,abundant marker for oligodendrocyte precursor cell,markers ranked with cohen mean
33,KLHL13,1-50,abundant marker for oligodendrocyte precursor cell,markers ranked with cohen mean
34,ATP1A2,1-50,abundant marker for oligodendrocyte precursor cell,markers ranked with cohen mean
35,ABTB3,1-50,abundant marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean
36,GCLC,1-50,abundant marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean
37,HCCS,1-50,abundant marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean
38,DPEP1,1-50,abundant marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean
39,SST,1-50,abundant marker for sst GABAergic cortical interneuron,markers ranked with cohen mean
40,GRIK1,1-50,abundant marker for sst GABAergic cortical interneuron,markers ranked with cohen mean
41,SYNPR,1-50,abundant marker for sst GABAergic cortical interneuron,markers ranked with cohen mean
42,ATP1A2,1-50,abundant marker for vascular leptomeningeal cell,markers ranked with cohen mean
43,EBF1,1-50,abundant marker for vascular leptomeningeal cell,markers ranked with cohen mean
44,PDGFRB,1-50,abundant marker for vascular leptomeningeal cell,markers ranked with cohen mean
45,VIP,1-50,abundant marker for vip GABAergic cortical interneuron,markers ranked with cohen mean
46,GALNTL6,1-50,abundant marker for vip GABAergic cortical interneuron,markers ranked with cohen mean
47,CX3CR1,1-50,abundant marker for microglial cell,Known Marker
48,DLGAP2,50-100,Less specific marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean
49,STXBP5L,50-100,Less specific marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean
50,CHRM3,50-100,Less specific marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean
51,NRGN,50-100,Less specific marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean
52,PDE1A,50-100,Less specific marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean
53,RALYL,50-100,Less specific marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean
54,PTPRR,50-100,Less specific marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean
55,MARCHF1,50-100,Less specific marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean
56,NKX2-2,50-100,Less specific marker for astrocyte of the cerebral cortex,markers ranked with cohen mean
57,OBI1-AS1,50-100,Less specific marker for astrocyte of the cerebral cortex,markers ranked with cohen mean
58,CRACD,50-100,Less specific marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean
59,MYO16,50-100,Less specific marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean
60,CACNA1B,50-100,Less specific marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean
61,ID3,50-100,Less specific marker for cerebral cortex endothelial cell,markers ranked with cohen mean
62,TBX3,50-100,Less specific marker for cerebral cortex endothelial cell,markers ranked with cohen mean
63,PLXND1,50-100,Less specific marker for cerebral cortex endothelial cell,markers ranked with cohen mean
64,TMEM132D,50-100,Less specific marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean
65,TENM1,50-100,Less specific marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean
66,SDK1,50-100,Less specific marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean
67,CLSTN2,50-100,Less specific marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean
68,RYR2,50-100,Less specific marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean
69,NRG1,50-100,Less specific marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean
70,NYAP2,50-100,Less specific marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean
71,MTUS2,50-100,Less specific marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean
72,LINC00299,50-100,Less specific marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean
73,APBB1IP,50-100,Less specific marker for microglial cell,markers ranked with cohen mean
74,SH3BP2,50-100,Less specific marker for microglial cell,markers ranked with cohen mean
75,C1QC,50-100,Less specific marker for microglial cell,markers ranked with cohen mean
76,FOXP2,50-100,Less specific marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean
77,CHN2,50-100,Less specific marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean
78,MED24,50-100,Less specific marker for oligodendrocyte,markers ranked with cohen mean
79,DAPK2,50-100,Less specific marker for oligodendrocyte,markers ranked with cohen mean
80,BCAS1,50-100,Less specific marker for oligodendrocyte,markers ranked with cohen mean
81,CTNS,50-100,Less specific marker for oligodendrocyte precursor cell,markers ranked with cohen mean
82,BCAS1,50-100,Less specific marker for oligodendrocyte precursor cell,markers ranked with cohen mean
83,SOX6,50-100,Less specific marker for oligodendrocyte precursor cell,markers ranked with cohen mean
84,ADAMTS17,50-100,Less specific marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean
85,FGF12,50-100,Less specific marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean
86,GRIP1,50-100,Less specific marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean
87,KMO,50-100,Less specific marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean
88,KCNK17,50-100,Less specific marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean
89,STXBP6,50-100,Less specific marker for sst GABAergic cortical interneuron,markers ranked with cohen mean
90,CDH9,50-100,Less specific marker for sst GABAergic cortical interneuron,markers ranked with cohen mean
91,ELAVL2,50-100,Less specific marker for sst GABAergic cortical interneuron,markers ranked with cohen mean
92,UTRN,50-100,Less specific marker for vascular leptomeningeal cell,markers ranked with cohen mean
93,CALD1,50-100,Less specific marker for vascular leptomeningeal cell,markers ranked with cohen mean
94,LAMA2,50-100,Less specific marker for vascular leptomeningeal cell,markers ranked with cohen mean
95,GALNT13,50-100,Less specific marker for vip GABAergic cortical interneuron,markers ranked with cohen mean
96,SNTG1,50-100,Less specific marker for vip GABAergic cortical interneuron,markers ranked with cohen mean
97,LINC01480,100-150,de-enriched marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean
98,AIF1,100-150,de-enriched marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean
99,MGC16275,100-150,de-enriched marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean
100,SALL3,100-150,de-enriched marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean
101,FMO6P,100-150,de-enriched marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean
102,GPRC5B,100-150,de-enriched marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean
103,SEMA6A,100-150,de-enriched marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean
104,CAPN2,100-150,de-enriched marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean
105,IL1RAPL1,100-150,de-enriched marker for astrocyte of the cerebral cortex,markers ranked with cohen mean
106,DSCAM,100-150,de-enriched marker for astrocyte of the cerebral cortex,markers ranked with cohen mean
107,PPP1R13L,100-150,de-enriched marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean
108,INPPL1,100-150,de-enriched marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean
109,EXPH5,100-150,de-enriched marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean
110,NCAM1,100-150,de-enriched marker for cerebral cortex endothelial cell,markers ranked with cohen mean
111,GABRG3,100-150,de-enriched marker for cerebral cortex endothelial cell,markers ranked with cohen mean
112,VRK2,100-150,de-enriched marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean
113,TRPM3,100-150,de-enriched marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean
114,CSGALNACT1,100-150,de-enriched marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean
115,RND3,100-150,de-enriched marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean
116,NOTCH2NLA,100-150,de-enriched marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean
117,EGFR,100-150,de-enriched marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean
118,DKKL1,100-150,de-enriched marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean
119,TNFSF10,100-150,de-enriched marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean
120,TRIB1,100-150,de-enriched marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean
121,DOK6,100-150,de-enriched marker for microglial cell,markers ranked with cohen mean
122,METTL6,100-150,de-enriched marker for microglial cell,markers ranked with cohen mean
123,TRIM16,100-150,de-enriched marker for microglial cell,markers ranked with cohen mean
124,HMOX1,100-150,de-enriched marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean
125,ETS1,100-150,de-enriched marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean
126,HERC2P4,100-150,de-enriched marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean
127,MYO1F,100-150,de-enriched marker for oligodendrocyte,markers ranked with cohen mean
128,GASK1B,100-150,de-enriched marker for oligodendrocyte,markers ranked with cohen mean
129,RTCB,100-150,de-enriched marker for oligodendrocyte,markers ranked with cohen mean
130,RBFOX3,100-150,de-enriched marker for oligodendrocyte precursor cell,markers ranked with cohen mean
131,TMEM119,100-150,de-enriched marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean
132,CAVIN2,100-150,de-enriched marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean
133,GBGT1,100-150,de-enriched marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean
134,IL6ST,100-150,de-enriched marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean
135,SFMBT2,100-150,de-enriched marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean
136,HS3ST6,100-150,de-enriched marker for sst GABAergic cortical interneuron,markers ranked with cohen mean
137,EPHA2,100-150,de-enriched marker for sst GABAergic cortical interneuron,markers ranked with cohen mean
138,CHST3,100-150,de-enriched marker for sst GABAergic cortical interneuron,markers ranked with cohen mean
139,CNIH3,100-150,de-enriched marker for vascular leptomeningeal cell,markers ranked with cohen mean
140,AGTPBP1,100-150,de-enriched marker for vascular leptomeningeal cell,markers ranked with cohen mean
141,AFDN,100-150,de-enriched marker for vascular leptomeningeal cell,markers ranked with cohen mean
142,MOBP,100-150,de-enriched marker for vip GABAergic cortical interneuron,markers ranked with cohen mean
143,LINC01094,100-150,de-enriched marker for vip GABAergic cortical interneuron,markers ranked with cohen mean
144,SAMD9L,100-150,de-enriched marker for vip GABAergic cortical interneuron,markers ranked with cohen mean
145,ALDH1L1,1-50,known marker gene for astrocyte of the cerebral cortex,sourced from prior knowledge
146,MBP,50-100,known marker gene for oligodendrocyte,sourced from prior knowledge
147,GFAP,50-100,known marker gene for astrocyte,sourced from prior knowledge
148,AQP4,1-50,known marker gene for astrocyte,sourced from prior knowledge
149,PVALB,50-100,spcific marker for pvalb interneurons,sourced from prior knowledge
150,SST,1-50,known marker gene SST interneurons,sourced from prior knowledge