Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/JeschkeLab__DeerLab__0.0 && ls -R
.:
CHANGELOG.md      LICENSE      README.md  deerlab  examples  test
DeerLab.egg-info  MANIFEST.in  VERSION    docsrc   setup.py

./DeerLab.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  top_level.txt

./deerlab:
__init__.py         deerload.py           fitregmodel.py    selregparam.py
bg_models.py        dipolarbackground.py  fitsignal.py      snlls.py
bootan.py           dipolarkernel.py      lsqcomponents.py  time2dist.py
classes.py          diststats.py          mixmodels.py      utils
correctphase.py     ex_models.py          nnls.py           whitegaussnoise.py
correctscale.py     fftspec.py            noiselevel.py
correctzerotime.py  fitmultimodel.py      regoperator.py
dd_models.py        fitparamodel.py       regparamrange.py

./deerlab/utils:
__init__.py  exvolume_alphas.py  gof.py  utils.py

./docsrc:
Makefile  README.md  make.bat  package-lock.json  source

./docsrc/source:
_static              examples         funding.rst              license.rst
basics.rst           examples.rst     images                   models
beginners_guide.rst  firstscript.rst  index.rst                modelsref.rst
changelog.rst        fitting.rst      installation.rst         preprocess.rst
conf.py              functions        installation_failed.rst  theory.rst
contributing.rst     functions.rst    latexdefs.tex            uncertainty.rst

./docsrc/source/_static:
custom.css   favicon.png  logo_dark.png   table_util.css
favicon.ico  logo.png     table_main.css  theme_override.css

./docsrc/source/examples:
example_aptsimple.rst                     example_globalfit_regularization.rst
example_backgroundtreatment.rst           example_mixmodels_fitting.rst
example_basic_5pdeer.rst                  example_multigauss_4pdeer.rst
example_basicprocessing.rst               example_pakepattern.rst
example_bootan_pardist.rst                example_param_error_propagation.rst
example_ci_regularization.rst             example_parfree_titration.rst
example_customkernel_snlls.rst            example_selectmodel.rst
example_emulating_deeranalysis.rst        example_tikhonovbasic.rst
example_extracting_gauss_constraints.rst  example_timedomainfitting.rst
example_globalfit_localglobal_vars.rst    example_visualization_lcurve.rst

./docsrc/source/functions:
FitResult.rst        deerload.rst           fitparamodel.rst   selregparam.rst
UncertQuant.rst      dipolarbackground.rst  fitregmodel.rst    snlls.rst
backgroundstart.rst  dipolarkernel.rst      fitsignal.rst      time2dist.rst
bootan.rst           diststats.rst          mixmodels.rst      whitenoise.rst
correctphase.rst     fftspec.rst            noiselevel.rst
correctscale.rst     fitbackground.rst      regoperator.rst
correctzerotime.rst  fitmultimodel.rst      regparamrange.rst

./docsrc/source/images:
beginners_guide1.png                 model_scheme_dd_sphere.png
eth_logo.png                         model_scheme_dd_spherepoint.png
model_scheme_bg_hom3d.png            model_scheme_dd_sphereshell.png
model_scheme_bg_hom3dex.png          model_scheme_dd_spheresurf.png
model_scheme_dd_gengauss.png         model_scheme_ex_4pdeer.png
model_scheme_dd_randcoil.png         model_scheme_ex_5pdeer.png
model_scheme_dd_shell.png            model_scheme_ex_7pdeer.png
model_scheme_dd_shellshell.png       model_scheme_ex_ovl4pdeer.png
model_scheme_dd_shellvoidshell.png   nih_logo.png
model_scheme_dd_shellvoidsphere.png  nsf_logo.png
model_scheme_dd_skewgauss.png        titlepage1.svg

./docsrc/source/models:
bg_exp.rst         dd_cos.rst         dd_shellsphere.rst      ex_4pdeer.rst
bg_hom3d.rst       dd_gauss.rst       dd_shellvoidshell.rst   ex_5pdeer.rst
bg_hom3dex.rst     dd_gauss2.rst      dd_shellvoidsphere.rst  ex_7pdeer.rst
bg_homfractal.rst  dd_gauss3.rst      dd_skewgauss.rst        ex_ovl4pdeer.rst
bg_poly1.rst       dd_gengauss.rst    dd_sphere.rst           ex_ridme1.rst
bg_poly2.rst       dd_randcoil.rst    dd_spherepoint.rst      ex_ridme3.rst
bg_poly3.rst       dd_rice.rst        dd_spheresurf.rst       ex_ridme5.rst
bg_prodstrexp.rst  dd_rice2.rst       dd_triangle.rst         ex_ridme7.rst
bg_strexp.rst      dd_rice3.rst       dd_uniform.rst
bg_sumstrexp.rst   dd_shell.rst       dd_wormchain.rst
dd_circle.rst      dd_shellshell.rst  dd_wormgauss.rst

./examples:
README.rst
plot_analyzing_pake_pattern.py
plot_bootstrapped_parameter_distributions.py
plot_comparing_uncertainties_for_regularization.py
plot_emulating_deeranalysis_workflow.py
plot_extracting_gauss_constraints.py
plot_fitting_4pdeer.py
plot_fitting_5pdeer.py
plot_fitting_custom_kernel_with_snlls.py
plot_fitting_mixed_model.py
plot_globalfits_local_and_global_parameters.py
plot_multigauss_fitting_4pdeer.py
plot_param_uncertainty_propagation.py
plot_pseudotitration_parameter_free.py
plot_selecting_an_optimal_model.py

./test:
test_bgmodels.py           test_diststats.py      test_noiselevel.py
test_bootan.py             test_fftspec.py        test_regoperator.py
test_correctphase.py       test_fitmultimodel.py  test_regparamrange.py
test_correctscale.py       test_fitparamodel.py   test_selregparam.py
test_correctzerotime.py    test_fitregmodel.py    test_snlls.py
test_ddmodels.py           test_fitsignal.py      test_whitegaussnoise.py
test_dipolarbackground.py  test_mixmodels.py
test_dipolarkernel.py      test_nnls.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/JeschkeLab__DeerLab__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
ls -la /workspace/sdv-dev__RDT__0.0
total 212
drwxr-xr-x 8 root root  4096 Feb  5 12:41 .
drwxrwxr-x 3 root root  4096 Feb  5 12:11 ..
-rw-rw-r-- 1 root root    30 Feb  5 12:41 .coveragerc
-rw-rw-r-- 1 root root   321 Feb  5 12:41 .editorconfig
drwxr-xr-x 5 root root  4096 Feb  5 12:44 .git
drwxr-xr-x 5 root root  4096 Feb  5 12:41 .github
-rw-rw-r-- 1 root root  1260 Feb  5 12:41 .gitignore
-rw-rw-r-- 1 root root    56 Feb  5 12:41 AUTHORS.rst
-rw-rw-r-- 1 root root 22494 Feb  5 12:41 CONTRIBUTING.rst
-rw-rw-r-- 1 root root 16968 Feb  5 12:41 DEVELOPMENT.rst
-rw-rw-r-- 1 root root 60903 Feb  5 12:41 HISTORY.md
-rw-rw-r-- 1 root root  1716 Feb  5 12:41 INSTALL.md
-rw-rw-r-- 1 root root  4872 Feb  5 12:41 LICENSE
-rw-rw-r-- 1 root root  6532 Feb  5 12:41 Makefile
-rw-rw-r-- 1 root root  7132 Feb  5 12:41 README.md
-rw-rw-r-- 1 root root  6508 Feb  5 12:41 RELEASE.md
-rw-rw-r-- 1 root root    91 Feb  5 12:41 latest_requirements.txt
-rw-rw-r-- 1 root root  5742 Feb  5 12:41 pyproject.toml
drwxr-xr-x 4 root root  4096 Feb  5 12:41 rdt
drwxrwxr-x 2 root root  4096 Feb  5 12:43 rdt.egg-info
drwxr-xr-x 2 root root  4096 Feb  5 12:41 scripts
-rw-rw-r-- 1 root root   427 Feb  5 12:41 static_code_analysis.txt
-rw-rw-r-- 1 root root  3755 Feb  5 12:41 tasks.py
drwxr-xr-x 6 root root  4096 Feb  5 12:41 tests
-rw-rw-r-- 1 root root   491 Feb  5 12:41 tox.ini[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/sdv-dev__RDT__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/MarketSquare__robotframework-tidy__0.0 && ls -R
.:
CHANGES.md       README.md    pyproject.toml                tasks.py
CONTRIBUTING.md  codecov.yml  robotframework_tidy.egg-info  tests
LICENSE          docs         robotidy                      utils
MANIFEST.in      noxfile.py   setup.py

./docs:
Makefile  _templates  make.bat  releasenotes  source

./docs/_templates:
sidebar

./docs/_templates/sidebar:
brand.html

./docs/releasenotes:
2.0.md     3.1.rst    3.3.rst    4.1.0.rst   4.3.0.rst  4.8.0.rst
2.0a1.md   3.2.rst    3.4.0.rst  4.10.0.rst  4.4.0.rst  4.8.1.rst
2.0b1.md   3.3.1.rst  3.5.0.rst  4.11.0.rst  4.5.0.rst  4.9.0.rst
3.0.rst    3.3.2.rst  4.0.0.rst  4.2.0.rst   4.6.0.rst  unreleased
3.0b1.rst  3.3.3.rst  4.0.1.rst  4.2.1.rst   4.7.0.rst

./docs/releasenotes/unreleased:
template.jinja

./docs/source:
_static  configuration              index.rst     quickstart.rst
conf.py  external_transformers.rst  overview.rst  transformers

./docs/source/_static:
robotidy.ico       robotidy_logo_small.png
robotidy_logo.png  robotidy_logo_small_dark.png

./docs/source/configuration:
config_file.rst               disablers.rst  skip_formatting.rst
configuring_transformers.rst  index.rst

./docs/source/transformers:
AddMissingEnd.rst               OrderSettings.rst
AlignKeywordsSection.rst        OrderSettingsSection.rst
AlignSettingsSection.rst        OrderTags.rst
AlignTemplatedTestCases.rst     RemoveEmptySettings.rst
AlignTestCasesSection.rst       RenameKeywords.rst
AlignVariablesSection.rst       RenameTestCases.rst
DiscardEmptySections.rst        RenameVariables.rst
GenerateDocumentation.rst       ReplaceBreakContinue.rst
IndentNestedKeywords.rst        ReplaceEmptyValues.rst
InlineIf.rst                    ReplaceReturns.rst
MergeAndOrderSections.rst       ReplaceRunKeywordIf.rst
NormalizeAssignments.rst        ReplaceWithVAR.rst
NormalizeComments.rst           SmartSortKeywords.rst
NormalizeNewLines.rst           SplitTooLongLine.rst
NormalizeSectionHeaderName.rst  Translate.rst
NormalizeSeparators.rst         disabled_hint.txt
NormalizeSettingName.rst        enabled_hint.txt
NormalizeTags.rst               index.rst

./robotframework_tidy.egg-info:
PKG-INFO     dependency_links.txt  requires.txt
SOURCES.txt  entry_points.txt      top_level.txt

./robotidy:
__init__.py  api.py  config.py      exceptions.py    skip.py       version.py
__main__.py  app.py  decorators.py  files.py         transformers
__pycache__  cli.py  disablers.py   rich_console.py  utils

./robotidy/__pycache__:
__init__.cpython-39.pyc  version.cpython-39.pyc

./robotidy/transformers:
AddMissingEnd.py               OrderSettings.py
AlignKeywordsSection.py        OrderSettingsSection.py
AlignSettingsSection.py        OrderTags.py
AlignTemplatedTestCases.py     RemoveEmptySettings.py
AlignTestCasesSection.py       RenameKeywords.py
AlignVariablesSection.py       RenameTestCases.py
DiscardEmptySections.py        RenameVariables.py
GenerateDocumentation.py       ReplaceBreakContinue.py
IndentNestedKeywords.py        ReplaceEmptyValues.py
InlineIf.py                    ReplaceReturns.py
MergeAndOrderSections.py       ReplaceRunKeywordIf.py
NormalizeAssignments.py        ReplaceWithVAR.py
NormalizeComments.py           SmartSortKeywords.py
NormalizeNewLines.py           SplitTooLongLine.py
NormalizeSectionHeaderName.py  Translate.py
NormalizeSeparators.py         __init__.py
NormalizeSettingName.py        aligners_core.py
NormalizeTags.py               run_keywords.py

./robotidy/utils:
misc.py  variable_matcher.py

./tests:
README.rst   atest        e2e         rf_versions_matrix
__init__.py  conftest.py  pytest.ini  utest

./tests/atest:
__init__.py  configuration_files  transformers

./tests/atest/configuration_files:
__init__.py  multiple_configs

./tests/atest/configuration_files/multiple_configs:
__init__.py  expected  expected_config_option  source  test_multiple_configs.py

./tests/atest/configuration_files/multiple_configs/expected:
root  test.robot

./tests/atest/configuration_files/multiple_configs/expected/root:
a  b  c  pyproject.toml

./tests/atest/configuration_files/multiple_configs/expected/root/a:
a_test.robot

./tests/atest/configuration_files/multiple_configs/expected/root/b:
bb

./tests/atest/configuration_files/multiple_configs/expected/root/b/bb:
bb_test.robot

./tests/atest/configuration_files/multiple_configs/expected/root/c:
c_test.robot  pyproject.toml

./tests/atest/configuration_files/multiple_configs/expected_config_option:
root  test.robot

./tests/atest/configuration_files/multiple_configs/expected_config_option/root:
a  b  c  pyproject.toml

./tests/atest/configuration_files/multiple_configs/expected_config_option/root/a:
a_test.robot

./tests/atest/configuration_files/multiple_configs/expected_config_option/root/b:
bb

./tests/atest/configuration_files/multiple_configs/expected_config_option/root/b/bb:
bb_test.robot

./tests/atest/configuration_files/multiple_configs/expected_config_option/root/c:
c_test.robot  pyproject.toml

./tests/atest/configuration_files/multiple_configs/source:
root  test.robot

./tests/atest/configuration_files/multiple_configs/source/root:
a  b  c  pyproject.toml

./tests/atest/configuration_files/multiple_configs/source/root/a:
a_test.robot

./tests/atest/configuration_files/multiple_configs/source/root/b:
bb

./tests/atest/configuration_files/multiple_configs/source/root/b/bb:
bb_test.robot

./tests/atest/configuration_files/multiple_configs/source/root/c:
c_test.robot  pyproject.toml

./tests/atest/transformers:
AddMissingEnd            NormalizeAssignments        RenameTestCases
AlignKeywordsSection     NormalizeComments           RenameVariables
AlignSettingsSection     NormalizeNewLines           ReplaceBreakContinue
AlignTemplatedTestCases  NormalizeSectionHeaderName  ReplaceEmptyValues
AlignTestCasesSection    NormalizeSeparators         ReplaceReturns
AlignVariablesSection    NormalizeSettingName        ReplaceRunKeywordIf
DiscardEmptySections     NormalizeTags               ReplaceWithVAR
ExternalTransformer      OrderSettings               SmartSortKeywords
GenerateDocumentation    OrderSettingsSection        SplitTooLongLine
IndentNestedKeywords     OrderTags                   Translate
InlineIf                 RemoveEmptySettings         __init__.py
MergeAndOrderSections    RenameKeywords

./tests/atest/transformers/AddMissingEnd:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/AddMissingEnd/expected:
test.robot  test_5.robot  test_selected.robot

./tests/atest/transformers/AddMissingEnd/source:
test.robot  test_5.robot  test_5_disablers.robot

./tests/atest/transformers/AlignKeywordsSection:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/AlignKeywordsSection/expected:
blocks.robot
blocks_auto.robot
blocks_auto_0.robot
blocks_rf5.robot
compact_overflow_last_0.robot
documentation_auto_align_first_col.robot
documentation_auto_skip.robot
documentation_fixed_align_first_col.robot
documentation_fixed_skip.robot
non_ascii_spaces.robot
one_column.robot
overflow_first_line.robot
settings.robot
simple_auto_ignore_line_0.robot
simple_auto_ignore_line_24_0_24.robot
simple_auto_ignore_line_24_24_24.robot
simple_auto_ignore_line_24_40_24.robot
simple_auto_ignore_line_4_4_4.robot
simple_auto_ignore_rest_0.robot
simple_auto_ignore_rest_24_0_24.robot
simple_auto_ignore_rest_24_24_24.robot
simple_auto_ignore_rest_24_40_24.robot
simple_auto_ignore_rest_4_4_4.robot
simple_auto_overflow_0.robot
simple_auto_overflow_24_0_24.robot
simple_auto_overflow_24_24_24.robot
simple_auto_overflow_24_40_24.robot
simple_auto_overflow_4_4_4.robot
simple_fixed_ignore_line_0.robot
simple_fixed_ignore_line_24_0_24.robot
simple_fixed_ignore_line_24_24_24.robot
simple_fixed_ignore_line_24_40_24.robot
simple_fixed_ignore_line_4_4_4.robot
simple_fixed_ignore_rest_0.robot
simple_fixed_ignore_rest_24_0_24.robot
simple_fixed_ignore_rest_24_24_24.robot
simple_fixed_ignore_rest_24_40_24.robot
simple_fixed_ignore_rest_4_4_4.robot
simple_fixed_overflow_0.robot
simple_fixed_overflow_24_0_24.robot
simple_fixed_overflow_24_24_24.robot
simple_fixed_overflow_24_40_24.robot
simple_fixed_overflow_4_4_4.robot
skip_keywords.robot
skip_return_values.robot
skip_settings.robot
too_long_line.robot
too_long_line_disablers.robot
too_long_token_counter_compact_overflow.robot
too_long_token_counter_ignore_line.robot
too_long_token_counter_ignore_rest.robot
too_long_token_counter_overflow.robot

./tests/atest/transformers/AlignKeywordsSection/source:
blocks.robot                   settings.robot
blocks_rf5.robot               simple.robot
compact_overflow_last_0.robot  skip_keywords.robot
documentation.robot            skip_return_values.robot
error_node.robot               too_long_line.robot
non_ascii_spaces.robot         too_long_line_disablers.robot
one_column.robot               too_long_token_counter.robot
overflow_first_line.robot

./tests/atest/transformers/AlignSettingsSection:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/AlignSettingsSection/expected:
all_columns.robot                  multiline_keywords_all_col.robot
all_columns_fixed.robot            selected_part.robot
argument_indents.robot             selected_whole.robot
blank_line_and_whitespace.robot    test.robot
blank_line_doc.robot               test_disablers.robot
empty_lines.robot                  test_fixed.robot
multiline_keywords.robot           test_min_width.robot
multiline_keywords_0indent.robot   test_min_width_50_width.robot
multiline_keywords_20indent.robot  test_skip_documentation.robot
multiline_keywords_2indent.robot   three_columns.robot

./tests/atest/transformers/AlignSettingsSection/source:
argument_indents.robot           empty_lines.robot         test_disablers.robot
blank_line_and_whitespace.robot  multiline_keywords.robot
blank_line_doc.robot             test.robot

./tests/atest/transformers/AlignTemplatedTestCases:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/AlignTemplatedTestCases/expected:
no_header_col.robot
partly_templated.robot
tags_settings.robot
templated_for_loops.robot
templated_for_loops_and_without.robot
templated_for_loops_and_without_fixed.robot
templated_for_loops_header_cols.robot
test.robot
test_fixed.robot
with_settings.robot

./tests/atest/transformers/AlignTemplatedTestCases/source:
disablers.robot         templated_for_loops.robot
empty_line.robot        templated_for_loops_and_without.robot
for_loops.robot         templated_for_loops_header_cols.robot
no_header_col.robot     test.robot
partly_templated.robot  with_settings.robot
tags_settings.robot

./tests/atest/transformers/AlignTestCasesSection:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/AlignTestCasesSection/expected:
blocks.robot
blocks_auto.robot
blocks_auto_0.robot
blocks_rf5.robot
compact_overflow_bug.robot
compact_overflow_last_0.robot
documentation_auto_align_first_col.robot
documentation_auto_skip.robot
documentation_fixed_align_first_col.robot
documentation_fixed_skip.robot
dynamic_compact_overflow.robot
dynamic_compact_overflow_limit_1.robot
non_ascii_spaces.robot
one_column.robot
overflow_first_line.robot
settings.robot
simple_auto_ignore_line_0.robot
simple_auto_ignore_line_24_0_24.robot
simple_auto_ignore_line_24_24_24.robot
simple_auto_ignore_line_24_40_24.robot
simple_auto_ignore_line_4_4_4.robot
simple_auto_ignore_rest_0.robot
simple_auto_ignore_rest_24_0_24.robot
simple_auto_ignore_rest_24_24_24.robot
simple_auto_ignore_rest_24_40_24.robot
simple_auto_ignore_rest_4_4_4.robot
simple_auto_overflow_0.robot
simple_auto_overflow_24_0_24.robot
simple_auto_overflow_24_24_24.robot
simple_auto_overflow_24_40_24.robot
simple_auto_overflow_4_4_4.robot
simple_fixed_ignore_line_0.robot
simple_fixed_ignore_line_24_0_24.robot
simple_fixed_ignore_line_24_24_24.robot
simple_fixed_ignore_line_24_40_24.robot
simple_fixed_ignore_line_4_4_4.robot
simple_fixed_ignore_rest_0.robot
simple_fixed_ignore_rest_24_0_24.robot
simple_fixed_ignore_rest_24_24_24.robot
simple_fixed_ignore_rest_24_40_24.robot
simple_fixed_ignore_rest_4_4_4.robot
simple_fixed_overflow_0.robot
simple_fixed_overflow_24_0_24.robot
simple_fixed_overflow_24_24_24.robot
simple_fixed_overflow_24_40_24.robot
simple_fixed_overflow_4_4_4.robot
skip_keywords.robot
skip_return_values_overflow.robot
too_long_token_counter_compact_overflow.robot
too_long_token_counter_ignore_line.robot
too_long_token_counter_ignore_rest.robot
too_long_token_counter_overflow.robot

./tests/atest/transformers/AlignTestCasesSection/source:
blocks.robot                            one_column.robot
blocks_rf5.robot                        overflow_first_line.robot
compact_overflow_bug.robot              settings.robot
compact_overflow_last_0.robot           simple.robot
documentation.robot                     skip_keywords.robot
dynamic_compact_overflow.robot          skip_return_values_overflow.robot
dynamic_compact_overflow_limit_1.robot  templated.robot
non_ascii_spaces.robot                  too_long_token_counter.robot

./tests/atest/transformers/AlignVariablesSection:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/AlignVariablesSection/expected:
align_selected_part.robot   tests.robot
align_selected_skip.robot   tests_2space_sep.robot
align_selected_whole.robot  tests_disablers.robot
all_columns.robot           tests_fixed.robot
all_columns_fixed.robot     tests_fixed_one.robot
long_comment.robot          tests_min_width.robot
multiline_skip.robot        tests_min_width_50_width.robot
multiline_with_blank.robot  tests_skip.robot
optional_equal_sign.robot   three_columns.robot
single_var.robot

./tests/atest/transformers/AlignVariablesSection/source:
align_selected.robot  multiline_with_blank.robot  tests.robot
long_comment.robot    optional_equal_sign.robot   tests_disablers.robot
multiline_skip.robot  single_var.robot

./tests/atest/transformers/DiscardEmptySections:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/DiscardEmptySections/expected:
removes_empty_sections.robot
removes_empty_sections_except_comments.robot
removes_empty_sections_skip_variables.robot
removes_selected_empty_section.robot

./tests/atest/transformers/DiscardEmptySections/source:
removes_empty_sections.robot  removes_empty_sections_disablers.robot

./tests/atest/transformers/ExternalTransformer:
ExternalDisabledTransformer.py  __init__.py
ExternalTransformer.py          expected
ExternalTransformers            source
ExternalTransf
[... Observation truncated due to length ...]
two_lines_keywords.robot

./tests/atest/transformers/NormalizeNewLines/source:
blocks.robot                   language_header_2empty.robot
consecutive_empty_lines.robot  language_header_5empty.robot
disablers.robot                language_header_and_comments.robot
disablers_selected.robot       multiline.robot
inline_if_0_lines.robot        templated_tests.robot
inline_if_1_lines.robot        test_case_last_0_lines.robot
inline_if_2_lines.robot        test_case_last_1_lines.robot
language_header_0empty.robot   tests.robot

./tests/atest/transformers/NormalizeSectionHeaderName:
__init__.py  expected  source  test_normalize_section_header.py

./tests/atest/transformers/NormalizeSectionHeaderName/expected:
selected.robot  task2.robot  translated.robot
task.robot      tests.robot  uppercase.robot

./tests/atest/transformers/NormalizeSectionHeaderName/source:
disablers.robot  task.robot  task2.robot  tests.robot  translated.robot

./tests/atest/transformers/NormalizeSeparators:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/NormalizeSeparators/expected:
bug390.robot                        inline_if_flatten.robot
comments_skip_block_comments.robot  pipes.robot
comments_skip_comments.robot        rf5_syntax.robot
cont_indent_align_new_line.robot    settings_variables_testcases.robot
continuation_indent.robot           skip_documentation.robot
flatten.robot                       skip_none.robot
flatten_rf4.robot                   test.robot
inline_if_2indent_2spaces.robot     test_8spaces.robot
inline_if_2indent_4spaces.robot     test_skip_keyword.robot
inline_if_4indent_2spaces.robot     testcases_keywords.robot
inline_if_4indent_4spaces.robot

./tests/atest/transformers/NormalizeSeparators/source:
bug390.robot               disablers.robot   disablers4.robot  pipes.robot
comments.robot             disablers2.robot  flatten.robot     rf5_syntax.robot
continuation_indent.robot  disablers3.robot  inline_if.robot   test.robot

./tests/atest/transformers/NormalizeSettingName:
__init__.py  expected  source  test_normalize_setting_name.py

./tests/atest/transformers/NormalizeSettingName/expected:
rf6.robot  selected.robot  tests.robot  translated.robot

./tests/atest/transformers/NormalizeSettingName/source:
disablers.robot  rf6.robot  tests.robot  translated.robot

./tests/atest/transformers/NormalizeTags:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/NormalizeTags/expected:
duplicates.robot               spacing_4indent_4spaces.robot
lowercase.robot                titlecase.robot
preserve_format_default.robot  uppercase.robot
preserve_format_enabled.robot  variables_in_tags_lowercase.robot
spacing_2indent_2spaces.robot  variables_in_tags_titlecase.robot
spacing_2indent_4spaces.robot  variables_in_tags_uppercase.robot
spacing_4indent_2spaces.robot

./tests/atest/transformers/NormalizeTags/source:
disablers.robot   disablers4.robot       rf6.robot      variables_in_tags.robot
disablers2.robot  duplicates.robot       spacing.robot
disablers3.robot  preserve_format.robot  tests.robot

./tests/atest/transformers/OrderSettings:
__init__.py  expected  source  test_order_settings.py

./tests/atest/transformers/OrderSettings/expected:
custom_order_all_end.robot                stick_comments.robot
custom_order_default.robot                test.robot
custom_order_without_test_teardown.robot  translated.robot

./tests/atest/transformers/OrderSettings/source:
disablers.robot  stick_comments.robot  test.robot  translated.robot

./tests/atest/transformers/OrderSettingsSection:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/OrderSettingsSection/expected:
last_section.robot    test_empty_group_order.robot
missing_group.robot   test_group_order.robot
parsing_error.robot   test_group_order_import_ordered.robot
remote_library.robot  test_missing_group_from_param.robot
test.robot            test_resource_metadata_first.robot
test_0_newline.robot  test_tags.robot
test_2_newline.robot

./tests/atest/transformers/OrderSettingsSection/source:
disablers.robot     last_section.robot   parsing_error.robot   test.robot
just_comment.robot  missing_group.robot  remote_library.robot  test_tags.robot

./tests/atest/transformers/OrderTags:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/OrderTags/expected:
case_insensitive.robot          default.robot
case_insensitive_reverse.robot  default_tags_false.robot
case_sensitive.robot            force_tags_false.robot
case_sensitive_reverse.robot    test_tags.robot

./tests/atest/transformers/OrderTags/source:
disablers.robot  test_tags.robot  tests.robot

./tests/atest/transformers/RemoveEmptySettings:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/RemoveEmptySettings/expected:
empty_always_more_explicit.robot
empty_always_no_explicit.robot
empty_overwritten_ok_more_explicit.robot
empty_overwritten_ok_no_explicit.robot
overwritten_always_more_explicit.robot
overwritten_always_no_explicit.robot
overwritten_overwritten_ok_more_explicit.robot
overwritten_overwritten_ok_no_explicit.robot

./tests/atest/transformers/RemoveEmptySettings/source:
disablers.robot  empty.robot  overwritten.robot

./tests/atest/transformers/RenameKeywords:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/RenameKeywords/expected:
bug537_538.robot                    run_keywords.robot
capitalize_first.robot              test.robot
embedded_variables.robot            test_transform_library.robot
library_embedded_var_pattern.robot  with_library_name.robot
no_title_case.robot                 with_library_name_transform.robot
rename_pattern_partial.robot        with_underscores.robot
rename_pattern_whole.robot

./tests/atest/transformers/RenameKeywords/source:
bug537_538.robot                    no_title_case.robot
disablers.robot                     run_keywords.robot
embedded_variables.robot            test.robot
library_embedded_var_pattern.robot  with_library_name.robot

./tests/atest/transformers/RenameTestCases:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/RenameTestCases/expected:
replace_pattern_empty.robot          selected.robot
replace_pattern_placeholder.robot    test.robot
replace_pattern_special_chars.robot  upper_case.robot

./tests/atest/transformers/RenameTestCases/source:
disablers.robot  empty_test_name.robot  test.robot

./tests/atest/transformers/RenameVariables:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/RenameVariables/expected:
VAR_syntax.robot             test_ignore_camel_case.robot
configure_ignore_vars.robot  test_ignore_settings_case.robot
disablers.robot              test_ignore_unknown.robot
excluded_vars.robot          test_lower.robot
if_while_conditions.robot    test_lower_with_nested.robot
inline_if.robot              test_separator_underscore.robot
math_operations.robot        test_template.robot
return_and_set_global.robot  try_except.robot
test.robot

./tests/atest/transformers/RenameVariables/source:
VAR_syntax.robot           inline_if.robot              test_template.robot
disablers.robot            math_operations.robot        try_except.robot
excluded_vars.robot        return_and_set_global.robot
if_while_conditions.robot  test.robot

./tests/atest/transformers/ReplaceBreakContinue:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/ReplaceBreakContinue/expected:
test.robot

./tests/atest/transformers/ReplaceBreakContinue/source:
disablers.robot  errors.robot  test.robot

./tests/atest/transformers/ReplaceEmptyValues:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/ReplaceEmptyValues/expected:
test.robot

./tests/atest/transformers/ReplaceEmptyValues/source:
test.robot

./tests/atest/transformers/ReplaceReturns:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/ReplaceReturns/expected:
return_from_keyword.robot              test.robot
return_from_keyword_if.robot           test_selected.robot
return_from_keyword_if_selected.robot

./tests/atest/transformers/ReplaceReturns/source:
errors.robot                     return_from_keyword_if.robot     test.robot
replace_returns_disablers.robot  run_keyword_and_return.robot
return_from_keyword.robot        run_keyword_and_return_if.robot

./tests/atest/transformers/ReplaceRunKeywordIf:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/ReplaceRunKeywordIf/expected:
configure_whitespace.robot  keyword_name_in_var.robot      tests.robot
invalid_data.robot          set_variable_workaround.robot  tests_selected.robot

./tests/atest/transformers/ReplaceRunKeywordIf/source:
configure_whitespace.robot  invalid_data.robot             tests.robot
disablers.robot             keyword_name_in_var.robot
golden.robot                set_variable_workaround.robot

./tests/atest/transformers/ReplaceWithVAR:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/ReplaceWithVAR/expected:
explicit_local.robot                   replace_set_variable_if_false.robot
replace_catenate_false.robot           test.robot
replace_create_dictionary_false.robot  too_long.robot
replace_create_list_false.robot

./tests/atest/transformers/ReplaceWithVAR/source:
invalid_inline_if.robot  test.robot  too_long.robot

./tests/atest/transformers/SmartSortKeywords:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/SmartSortKeywords/expected:
multiple_sections.robot  sort_ci_ilu.robot      sort_ilu.robot
sort_.robot              sort_ci_ilu_iou.robot  sort_ilu_iou.robot
sort_ci.robot            sort_ci_iou.robot      sort_iou.robot

./tests/atest/transformers/SmartSortKeywords/source:
disablers.robot                  multiple_sections.robot
empty_before_fist_keyword.robot  sort_input.robot

./tests/atest/transformers/SplitTooLongLine:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/SplitTooLongLine/expected:
VAR_syntax.robot
align_new_line.robot
align_new_line_all.robot
comments.robot
comments_skip_comments.robot
comments_split_scalar.robot
continuation_indent_feed.robot
continuation_indent_split.robot
feed_until_line_length.robot
feed_until_line_length_4.robot
multiple_assignments_on_every_arg.robot
multiple_assignments_on_every_arg_120.robot
multiple_assignments_until_line_length.robot
settings_on_every_arg.robot
settings_skip_tests.robot
settings_until_line_length.robot
settings_until_line_length_skip_comments.robot
skip_keywords.robot
split_on_every_arg.robot
split_on_every_arg_4.robot
variables_feed.robot
variables_split_on_every_value.robot
variables_split_scalar.robot

./tests/atest/transformers/SplitTooLongLine/source:
VAR_syntax.robot      continuation_indent.robot   settings.robot
align_new_line.robot  disablers.robot             tests.robot
comments.robot        multiple_assignments.robot  variables.robot

./tests/atest/transformers/Translate:
__init__.py  expected  source  test_transformer.py

./tests/atest/transformers/Translate/expected:
add_lang_header  bdd  de.robot  en.robot  en_with_pl_header.robot  pl.robot

./tests/atest/transformers/Translate/expected/add_lang_header:
comment_section.robot   en_header.robot
diff_lang_header.robot  no_lang_header.robot

./tests/atest/transformers/Translate/expected/bdd:
pl.robot  pl_alternative.robot  uk.robot

./tests/atest/transformers/Translate/source:
add_lang_header  en.robot  pl_and_de.robot
bdd              pl.robot  pl_language_header.robot

./tests/atest/transformers/Translate/source/add_lang_header:
comment_section.robot   empty.robot      no_lang_header.robot
diff_lang_header.robot  en_header.robot

./tests/atest/transformers/Translate/source/bdd:
en_and_pl.robot

./tests/e2e:
test_data  test_transform_stability.py

./tests/e2e/test_data:
too_long_variable.robot

./tests/rf_versions_matrix:
requirements_rf4.txt  requirements_rf6.txt
requirements_rf5.txt  requirements_rf7.txt

./tests/utest:
__init__.py  test_cli.py     test_disablers.py          test_skip.py   testdata
test_api.py  test_config.py  test_load_transformers.py  test_utils.py  utils.py

./tests/utest/testdata:
auto_line_sep                    empty_pyproject1        nested
check                            empty_pyproject2        only_pyproject
config                           gitignore               pyproject_with_src
config.txt                       invalid_options_config  read_only
config_with_custom_transformers  invalid_pyproject       with_git_dir
disablers                        line_sep

./tests/utest/testdata/auto_line_sep:
cr.robot  crlf.robot  crlf_mixed.robot  empty.robot  lf.robot

./tests/utest/testdata/check:
golden.robot  not_golden.robot

./tests/utest/testdata/config:
robotidy.toml

./tests/utest/testdata/config_with_custom_transformers:
CustomTransformer.py  custom_transformers.toml  load_transformers.toml

./tests/utest/testdata/disablers:
empty.robot
file_disabled.robot
file_disabled_and_enabled.robot
file_disabled_enabled_in_comments.robot
file_disabled_in_comments.robot
file_disabled_in_comments_no_header.robot
file_disabled_in_selected.robot
open_disabler_in_section.robot
test.robot

./tests/utest/testdata/empty_pyproject1:
pyproject.toml

./tests/utest/testdata/empty_pyproject2:
pyproject.toml

./tests/utest/testdata/gitignore:
nested  test.resource  test.robot  test.txt  test2.robot

./tests/utest/testdata/gitignore/nested:
test.robot  test2.robot

./tests/utest/testdata/invalid_options_config:
pyproject_confgure.toml  pyproject_idontexist.toml

./tests/utest/testdata/invalid_pyproject:
pyproject.toml

./tests/utest/testdata/line_sep:
expected.robot  test.robot

./tests/utest/testdata/nested:
nested  robotidy.toml

./tests/utest/testdata/nested/nested:
deeper

./tests/utest/testdata/nested/nested/deeper:
test.robot

./tests/utest/testdata/only_pyproject:
pyproject.toml

./tests/utest/testdata/pyproject_with_src:
pyproject.toml  resources  test.robot  test3.robot

./tests/utest/testdata/pyproject_with_src/resources:
test.robot

./tests/utest/testdata/read_only:
test.robot

./tests/utest/testdata/with_git_dir:
project_a  pyproject.toml

./tests/utest/testdata/with_git_dir/project_a:
test.robot

./utils:
new_transformer_templates  release_docs_templates

./utils/new_transformer_templates:
docs.template  test_transformer.template  transformer.template

./utils/release_docs_templates:
new_release.template[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/MarketSquare__robotframework-tidy__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/novonordisk-research__ProcessOptimizer__0.0 && ls -R
.:
AUTHORS_scikit_optimize.md  ProcessOptimizer.egg-info   plot_test
CHANGELOG.md                README.md                   pytest.ini
CODE_OF_CONDUCT.md          README_scikit_optimize.rst  requirements.txt
LICENSE.md                  examples                    setup.py
ProcessOptimizer            media

./ProcessOptimizer:
__init__.py     benchmarks.py  callbacks.py  optimizer  searchcv.py  tests
acquisition.py  bokeh_plot.py  learning      plots.py   space        utils.py

./ProcessOptimizer/learning:
__init__.py  forest.py  gaussian_process  gbrt.py

./ProcessOptimizer/learning/gaussian_process:
__init__.py  gpr.py  kernels.py

./ProcessOptimizer/optimizer:
_NSGA2.py    base.py   forest.py  gp.py
__init__.py  dummy.py  gbrt.py    optimizer.py

./ProcessOptimizer/space:
__init__.py  constraints.py  space.py  transformers.py

./ProcessOptimizer/tests:
__init__.py            test_deprecation.py  test_multiobjective.py
test_Steinerberger.py  test_dummy_opt.py    test_optimizer.py
test_acquisition.py    test_forest_opt.py   test_parallel_cl.py
test_benchmarks.py     test_gbrt.py         test_space.py
test_callbacks.py      test_gp_opt.py       test_utils.py
test_common.py         test_gpr.py
test_constraints.py    test_kernels.py

./ProcessOptimizer.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt

./examples:
 7Dimensional_optimization_and_plotting.ipynb
 BO_GIF.gif
 Booth_function.png
 BraninHooAsMultiobjectiveAndPlottingHints.ipynb
 Convergence_plot.png
'Exploration vs exploitation.ipynb'
'Latin hypercube sampling.ipynb'
'Length scale bounds.ipynb'
'Multiobjective with Pareto Front- Fonseca–Fleming function.ipynb'
 ProccesOptimize_examples.ipynb
 ProccesOptimize_examples_categorical_values.ipynb
 ask-and-tell.ipynb
 bayesian-optimization.ipynb
 constraints.ipynb
 store-and-load-results.ipynb
 visualizing-results.ipynb

./media:
bo-objective.png

./plot_test:
bokeh_categorical.py  plot_objective.ipynb
bokeh_numerical.py    plot_objective_categorical_values.ipynb[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/novonordisk-research__ProcessOptimizer__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/CirQuS-UTS__QuanGuru__0.0 && ls -l
total 40
-rw-rw-r-- 1 root root 1658 Feb  4 21:09 LICENSE
-rw-rw-r-- 1 root root   81 Feb  4 21:09 MANIFEST.in
-rw-rw-r-- 1 root root 3700 Feb  4 21:09 README.md
drwxr-xr-x 3 root root 4096 Feb  4 21:09 docs
-rw-rw-r-- 1 root root  104 Feb  4 21:09 pyproject.toml
-rw-rw-r-- 1 root root  192 Feb  4 21:09 requirements-dev.txt
-rw-rw-r-- 1 root root   12 Feb  4 21:09 requirements.txt
-rw-rw-r-- 1 root root 1693 Feb  4 21:09 setup.cfg
drwxr-xr-x 4 root root 4096 Feb  4 21:09 src
drwxr-xr-x 4 root root 4096 Feb  4 21:09 tests[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/CirQuS-UTS__QuanGuru__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/GreenScheduler__cats__0.0 && ls -l
total 152
-rw-rw-r-- 1 root root   5591 Feb  5 17:55 CODE_OF_CONDUCT.md
-rw-rw-r-- 1 root root   1071 Feb  5 17:55 LICENSE
-rw-rw-r-- 1 root root   2895 Feb  5 17:55 README.md
drwxr-xr-x 2 root root   4096 Feb  5 17:55 cats
-rw-rw-r-- 1 root root 108656 Feb  5 17:55 cats.gif
drwxrwxr-x 2 root root   4096 Feb  5 17:56 climate_aware_task_scheduler.egg-info
-rw-rw-r-- 1 root root    676 Feb  5 17:55 config.yml
drwxr-xr-x 3 root root   4096 Feb  5 17:55 docs
-rw-rw-r-- 1 root root    310 Feb  5 17:55 fixed_parameters.yaml
-rw-rw-r-- 1 root root    653 Feb  5 17:55 pyproject.toml
drwxr-xr-x 2 root root   4096 Feb  5 17:55 tests[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/GreenScheduler__cats__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/solegalli__feature_engine__0.0 && ls -R
.:
LICENSE.md   examples                 requirements.txt       tox.ini
MANIFEST.in  feature_engine           setup.py
README.md    feature_engine.egg-info  test_requirements.txt
docs         mypy.ini                 tests

./docs:
Makefile             contribute        howto.rst         selection
_static              courses.rst       images            sphinxext
_templates           creation          imputation        transformation
about.rst            datasets.rst      index.rst         tutorials.rst
blogs.rst            discretisation    installation.rst  whats_new
books.rst            encoding          outliers          wrappers
code_of_conduct.rst  getting_help.rst  quickstart.rst
conf.py              governance.rst    requirements.txt

./docs/_static:
css

./docs/_static/css:
feature-engine.css

./docs/_templates:
breadcrumbs.html  numpydoc_docstring.rst

./docs/contribute:
building_the_docs.rst  github_quick_start.rst  index.rst

./docs/creation:
CombineWithReferenceFeature.rst  MathematicalCombination.rst  index.rst

./docs/discretisation:
ArbitraryDiscretiser.rst     EqualFrequencyDiscretiser.rst  index.rst
DecisionTreeDiscretiser.rst  EqualWidthDiscretiser.rst

./docs/encoding:
CountFrequencyEncoder.rst  OneHotEncoder.rst   RareLabelEncoder.rst
DecisionTreeEncoder.rst    OrdinalEncoder.rst  WoEEncoder.rst
MeanEncoder.rst            PRatioEncoder.rst   index.rst

./docs/images:
FeatureEngine.png                 lotarearaw.png
Logo.png                          lotareareciprocal.png
arbitraryvalueimputation.png      lotareayeojohnson.png
cookbook.png                      lstat_disc_arbitrarily.png
endtailimputer.png                lstat_disc_arbitrarily2.png
equalfrequencydiscretisation.png  lstat_hist.png
equalwidthdiscretisation.png      medianimputation.png
favicon.png                       missingcategoryimputer.png
feml_logo.png                     missingindicator.png
fsml_logo.png                     pipelineprediction.png
ivml_logo.png                     randomsampleimputation.png
lotareaboxcox.png                 selectionSummary.png
lotarealog.png                    treediscretisation.png
lotareapower.png                  yeojohnsonformula.png

./docs/imputation:
AddMissingIndicator.rst     DropMissingData.rst    RandomSampleImputer.rst
ArbitraryNumberImputer.rst  EndTailImputer.rst     index.rst
CategoricalImputer.rst      MeanMedianImputer.rst

./docs/outliers:
ArbitraryOutlierCapper.rst  OutlierTrimmer.rst  Winsorizer.rst  index.rst

./docs/selection:
DropConstantFeatures.rst         SelectByShuffling.rst
DropCorrelatedFeatures.rst       SelectBySingleFeaturePerformance.rst
DropDuplicateFeatures.rst        SelectByTargetMeanPerformance.rst
DropFeatures.rst                 SmartCorrelatedSelection.rst
RecursiveFeatureAddition.rst     index.rst
RecursiveFeatureElimination.rst

./docs/sphinxext:
LICENSE.txt  README.txt  github_link.py

./docs/transformation:
BoxCoxTransformer.rst  PowerTransformer.rst       YeoJohnsonTransformer.rst
LogTransformer.rst     ReciprocalTransformer.rst  index.rst

./docs/whats_new:
changelog.rst  index.rst  v1.rst

./docs/wrappers:
Wrapper.rst  index.rst

./examples:
Pipelines  discretisation             imputation  transformation
README.md  encoding                   outliers    wrappers
creation   examples_requirements.txt  selection

./examples/Pipelines:
create-new-features-with-feature-engine.ipynb
predict-house-price-with-feature-engine.ipynb

./examples/creation:
CombineWithReferenceFeature.ipynb  MathematicalCombination.ipynb

./examples/discretisation:
ArbitraryDiscretiser.ipynb
ArbitraryDiscretiser_plus_MeanEncoder.ipynb
DecisionTreeDiscretiser.ipynb
EqualFrequencyDiscretiser.ipynb
EqualFrequencyDiscretiser_plus_WoEEncoder.ipynb
EqualWidthDiscretiser.ipynb
EqualWidthDiscretiser_plus_OrdinalEncoder.ipynb

./examples/encoding:
CountFrequencyEncoder.ipynb  OneHotEncoder.ipynb   RareLabelEncoder.ipynb
DecisionTreeEncoder.ipynb    OrdinalEncoder.ipynb  WoEEncoder.ipynb
MeanEncoder.ipynb            PRatioEncoder.ipynb

./examples/imputation:
AddMissingIndicator.ipynb     EndTailImputer.ipynb
ArbitraryNumberImputer.ipynb  MeanMedianImputer.ipynb
CategoricalImputer.ipynb      RandomSampleImputer.ipynb
DropMissingData.ipynb

./examples/outliers:
ArbitraryOutlierCapper.ipynb  OutlierTrimmer.ipynb  Winsorizer.ipynb

./examples/selection:
Drop-Arbitrary-Features.ipynb
Drop-Constant-and-QuasiConstant-Features.ipynb
Drop-Correlated-Features.ipynb
Drop-Duplicated-Features.ipynb
Recursive-Feature-Addition.ipynb
Recursive-Feature-Elimination.ipynb
Select-by-Feature-Shuffling.ipynb
Select-by-Single-Feature-Performance.ipynb
Select-by-Target-Mean-Encoding.ipynb
Smart-Correlation-Selection.ipynb

./examples/transformation:
BoxCoxTransformer.ipynb  ReciprocalTransformer.ipynb
LogTransformer.ipynb     YeoJohnsonTransformer.ipynb
PowerTransformer.ipynb

./examples/wrappers:
Sklearn-wrapper-plus-Categorical-Encoding.ipynb
Sklearn-wrapper-plus-KBinsDiscretizer.ipynb
Sklearn-wrapper-plus-SimpleImputer.ipynb
Sklearn-wrapper-plus-feature-selection.ipynb
Sklearn-wrapper-plus-scalers.ipynb

./feature_engine:
VERSION               discretisation       selection
__init__.py           encoding             transformation
base_transformers.py  imputation           variable_manipulation.py
creation              outliers             wrappers
dataframe_checks.py   parameter_checks.py

./feature_engine/creation:
__init__.py  combine_with_reference_feature.py  mathematical_combination.py

./feature_engine/discretisation:
__init__.py  arbitrary.py  decision_tree.py  equal_frequency.py  equal_width.py

./feature_engine/encoding:
__init__.py         decision_tree.py  ordinal.py            woe.py
base_encoder.py     mean_encoding.py  probability_ratio.py
count_frequency.py  one_hot.py        rare_label.py

./feature_engine/imputation:
__init__.py          categorical.py        mean_median.py
arbitrary_number.py  drop_missing_data.py  missing_indicator.py
base_imputer.py      end_tail.py           random_sample.py

./feature_engine/outliers:
__init__.py  artbitrary.py  base_outlier.py  trimmer.py  winsorizer.py

./feature_engine/selection:
__init__.py                  recursive_feature_addition.py
base_selector.py             recursive_feature_elimination.py
drop_constant_features.py    shuffle_features.py
drop_correlated_features.py  single_feature_performance.py
drop_duplicate_features.py   smart_correlation_selection.py
drop_features.py             target_mean_selection.py

./feature_engine/transformation:
__init__.py  boxcox.py  log.py  power.py  reciprocal.py  yeojohnson.py

./feature_engine/wrappers:
__init__.py  wrappers.py

./feature_engine.egg-info:
PKG-INFO     dependency_links.txt  requires.txt
SOURCES.txt  not-zip-safe          top_level.txt

./tests:
__init__.py               test_outliers
conftest.py               test_parameter_checks.py
test_creation             test_selection
test_dataframe_checks.py  test_transformation
test_discretisation       test_variable_manipulation.py
test_encoding             test_wrappers
test_imputation           titanic_test.csv

./tests/test_creation:
__init__.py                             test_mathematical_combination.py
test_combine_with_reference_feature.py

./tests/test_discretisation:
__init__.py                         test_equal_frequency_discretiser.py
test_arbitrary_discretiser.py       test_equal_width_discretiser.py
test_decistion_tree_discretiser.py

./tests/test_encoding:
__init__.py                      test_ordinal_encoder.py
test_count_frequency_encoder.py  test_probability_ratio_encoder.py
test_decision_tree_encoder.py    test_rare_label_encoder.py
test_mean_encoder.py             test_woe_encoder.py
test_onehot_encoder.py

./tests/test_imputation:
__init__.py                       test_end_tail_imputer.py
test_arbitrary_number_imputer.py  test_mean_mdian_imputer.py
test_categorical_imputer.py       test_missing_indicator.py
test_drop_missing_data.py         test_random_sample_imputer.py

./tests/test_outliers:
__init__.py               test_outlier_trimmer.py
test_arbitrary_capper.py  test_winsorizer.py

./tests/test_selection:
__init__.py                       test_recursive_feature_addition.py
conftest.py                       test_recursive_feature_elimination.py
test_drop_constant_features.py    test_shuffle_features.py
test_drop_correlated_features.py  test_single_feature_performance_selection.py
test_drop_duplicate_features.py   test_smart_correlation_selection.py
test_drop_features.py             test_target_mean_selection.py

./tests/test_transformation:
__init__.py                 test_power_transformer.py
test_boxcox_transformer.py  test_reciprocal_transformer.py
test_log_transformer.py     test_yeojohnson_transformer.py

./tests/test_wrappers:
__init__.py  test_sklearn_wrapper.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/solegalli__feature_engine__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/TorchEnsemble-Community__Ensemble-Pytorch__0.0 && ls -R
.:
CHANGELOG.rst    MINIFEST.in  docs              setup.py
CONTRIBUTORS.md  README.rst   examples          torchensemble
LICENSE          build_tools  requirements.txt  torchensemble.egg-info

./build_tools:
cleanup.bat  linting.sh  requirements.txt

./docs:
Makefile  _templates     experiment.rst  introduction.rst  quick_start.rst
_images   changelog.rst  guide.rst       make.bat          requirements.txt
_static   conf.py        index.rst       parameters.rst    roadmap.rst

./docs/_images:
badge.png  badge_small.png  fusion.png  gradient_boosting.png  logo.ico

./docs/_static:
custom.css

./docs/_templates:
apidoc     class_with_call.rst     function.rst  numpydoc_docstring.rst
class.rst  class_without_init.rst  module.rst

./docs/_templates/apidoc:
module.rst_t  package.rst_t  toc.rst_t

./examples:
classification_cifar10_cnn.py        snapshot_ensemble_cifar10_resnet18.py
regression_YearPredictionMSD_mlp.py

./torchensemble:
__init__.py    adversarial_training.py  gradient_boosting.py  utils
_base.py       bagging.py               snapshot_ensemble.py  voting.py
_constants.py  fusion.py                tests

./torchensemble/tests:
test_adversarial_training.py  test_operator.py       test_training_params.py
test_all_models.py            test_set_optimizer.py
test_logging.py               test_set_scheduler.py

./torchensemble/utils:
__init__.py  io.py  logging.py  operator.py  set_module.py

./torchensemble.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/TorchEnsemble-Community__Ensemble-Pytorch__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/simpeg__simpeg__0.0 && find . -name "*.py"
./tutorials/06-ip/plot_inv_2_dcip2d.py
./tutorials/06-ip/plot_fwd_3_dcip3d.py
./tutorials/06-ip/plot_fwd_2_dcip2d.py
./tutorials/06-ip/plot_inv_3_dcip3d.py
./tutorials/_temporary/plot_fwd_1_em1dtm_stitched_skytem.py
./tutorials/_temporary/plot_inv_1_em1dtm_stitched_skytem.py
./tutorials/_temporary/plot_4c_fdem3d_inversion.py
./tutorials/04-magnetics/plot_2b_magnetics_mvi.py
./tutorials/04-magnetics/plot_inv_2a_magnetics_induced.py
./tutorials/04-magnetics/plot_2a_magnetics_induced.py
./tutorials/13-joint_inversion/plot_inv_3_cross_gradient_pf.py
./tutorials/07-fdem/plot_fwd_1_em1dfm.py
./tutorials/07-fdem/plot_fwd_3_fem_3d.py
./tutorials/07-fdem/plot_inv_1_em1dfm.py
./tutorials/07-fdem/plot_fwd_1_em1dfm_dispersive.py
./tutorials/07-fdem/plot_fwd_2_fem_cyl.py
./tutorials/14-pgi/plot_inv_2_joint_pf_pgi_no_info_tutorial.py
./tutorials/14-pgi/plot_inv_1_joint_pf_pgi_full_info_tutorial.py
./tutorials/01-models_mapping/plot_3_tree_models.py
./tutorials/01-models_mapping/plot_1_tensor_models.py
./tutorials/01-models_mapping/plot_2_cyl_models.py
./tutorials/02-linear_inversion/plot_inv_2_inversion_irls.py
./tutorials/02-linear_inversion/plot_inv_1_inversion_lsq.py
./tutorials/05-dcr/plot_fwd_1_dcr_sounding.py
./tutorials/05-dcr/plot_inv_3_dcr3d.py
./tutorials/05-dcr/plot_inv_1_dcr_sounding.py
./tutorials/05-dcr/plot_inv_2_dcr2d.py
./tutorials/05-dcr/plot_inv_1_dcr_sounding_parametric.py
./tutorials/05-dcr/plot_inv_2_dcr2d_irls.py
./tutorials/05-dcr/plot_fwd_3_dcr3d.py
./tutorials/05-dcr/plot_gen_3_3d_to_2d.py
./tutorials/05-dcr/plot_fwd_2_dcr2d.py
./tutorials/05-dcr/plot_inv_1_dcr_sounding_irls.py
./tutorials/03-gravity/plot_inv_1b_gravity_anomaly_irls.py
./tutorials/03-gravity/plot_1a_gravity_anomaly.py
./tutorials/03-gravity/plot_1b_gravity_gradiometry.py
./tutorials/03-gravity/plot_inv_1a_gravity_anomaly.py
./tutorials/12-seismic/plot_inv_1_tomography_2D.py
./tutorials/12-seismic/plot_fwd_1_tomography_2D.py
./tutorials/08-tdem/plot_fwd_3_tem_3d.py
./tutorials/08-tdem/plot_inv_1_em1dtm.py
./tutorials/08-tdem/plot_fwd_1_em1dtm_dispersive.py
./tutorials/08-tdem/plot_fwd_2_tem_cyl.py
./tutorials/08-tdem/plot_fwd_1_em1dtm_waveforms.py
./tutorials/08-tdem/plot_fwd_1_em1dtm.py
./tutorials/10-vrm/plot_fwd_2_vrm_topsoil.py
./tutorials/10-vrm/plot_fwd_3_vrm_tem.py
./tutorials/10-vrm/plot_fwd_1_vrm_layer.py
./tests/em/nsem/forward/test_1D_finite_volume.py
./tests/em/nsem/forward/test_Recursive1D_VsAnalyticHalfspace.py
./tests/em/nsem/forward/test_Problem1D_AnalyticVsNumeric.py
./tests/em/nsem/forward/__init__.py
./tests/em/nsem/forward/test_Problem3D_VsAnalyticSolution.py
./tests/em/nsem/forward/test_Problem1D_VsAnalyticHalfspace.py
./tests/em/nsem/forward/test_AnalyticFunctionVsAppResPhs.py
./tests/em/nsem/__init__.py
./tests/em/nsem/utils/test_data_utils.py
./tests/em/nsem/inversion/test_complex_resistivity.py
./tests/em/nsem/inversion/__init__.py
./tests/em/nsem/inversion/test_BC_Sims.py
./tests/em/nsem/inversion/test_Problem3D_Adjoint.py
./tests/em/nsem/inversion/test_Problem3D_Derivs.py
./tests/em/nsem/inversion/test_Problem1D_Adjoint.py
./tests/em/nsem/inversion/test_Problem1D_Derivs.py
./tests/em/nsem/survey/test_nsem_data.py
./tests/em/vrm/__init__.py
./tests/em/vrm/test_waveform.py
./tests/em/vrm/test_vrmfwd.py
./tests/em/vrm/test_vrminv.py
./tests/em/__init__.py
./tests/em/utils/test_linecurrents.py
./tests/em/utils/__init__.py
./tests/em/static/test_IP_jvecjtvecadj.py
./tests/em/static/test_DC_2D_jvecjtvecadj.py
./tests/em/static/test_IP_2D_jvecjtvecadj.py
./tests/em/static/test_SIP_jvecjtvecadj.py
./tests/em/static/test_DC_FieldsDipoleFullspace.py
./tests/em/static/test_DC_Boundaries.py
./tests/em/static/__init__.py
./tests/em/static/test_DC_1D_jvecjtvecadj.py
./tests/em/static/test_SPjvecjtvecadj.py
./tests/em/static/test_properties.py
./tests/em/static/test_DC_miniaturize.py
./tests/em/static/test_IP_2D_fwd.py
./tests/em/static/test_IO.py
./tests/em/static/test_DC_Utils.py
./tests/em/static/test_SIP_2D_jvecjtvecadj.py
./tests/em/static/test_DCIP_io_utils.py
./tests/em/static/test_IP_fwd.py
./tests/em/static/test_DC_analytic.py
./tests/em/static/test_DC_jvecjtvecadj.py
./tests/em/static/test_DC_FieldsMultipoleFullspace.py
./tests/em/static/test_DC_2D_analytic.py
./tests/em/fdem/forward/test_FDEM_forwardEJHB.py
./tests/em/fdem/forward/__init__.py
./tests/em/fdem/forward/test_FDEM_analytics.py
./tests/em/fdem/forward/test_FDEM_primsec.py
./tests/em/fdem/forward/test_FDEM_forward.py
./tests/em/fdem/forward/test_properties.py
./tests/em/fdem/forward/test_permittivity.py
./tests/em/fdem/forward/test_FDEM_casing.py
./tests/em/fdem/forward/test_FDEM_forwardHB.py
./tests/em/fdem/forward/test_FDEM_sources.py
./tests/em/fdem/__init__.py
./tests/em/fdem/inverse/adjoint/__init__.py
./tests/em/fdem/inverse/adjoint/test_FDEM_adjointHJ.py
./tests/em/fdem/inverse/adjoint/test_FDEM_adjointEB.py
./tests/em/fdem/inverse/derivs/__init__.py
./tests/em/fdem/inverse/derivs/test_FDEM_derivs.py
./tests/em/fdem/muinverse/test_muinverse.py
./tests/em/em1d/test_EM1D_TD_general_fwd.py
./tests/em/em1d/test_EM1D_TD_dual_moment_fwd.py
./tests/em/em1d/__init__.py
./tests/em/em1d/test_EM1D_TD_off_jac_layers.py
./tests/em/em1d/test_EM1D_TD_off_fwd.py
./tests/em/em1d/test_EM1D_TD_general_jac_layers.py
./tests/em/em1d/test_EM1D_FD_jac_layers.py
./tests/em/em1d/test_EM1D_FD_fwd.py
./tests/em/tdem/test_TDEM_DerivAdjoint_galvanic.py
./tests/em/tdem/test_TDEM_DerivAdjoint_RawWaveform.py
./tests/em/tdem/__init__.py
./tests/em/tdem/test_TDEM_inductive_permeable.py
./tests/em/tdem/test_properties.py
./tests/em/tdem/test_TDEM_DerivAdjoint.py
./tests/em/tdem/test_TDEM_sources.py
./tests/em/tdem/test_TDEM_forward_Analytic.py
./tests/em/tdem/test_TDEM_crosscheck.py
./tests/em/tdem/test_TDEM_forward_Analytic_RawWaveform.py
./tests/em/tdem/test_TDEM_grounded.py
./tests/seis/__init__.py
./tests/seis/test_tomo.py
./tests/__init__.py
./tests/dask/test_IP_jvecjtvecadj_dask.py
./tests/dask/test_grav_inversion_linear.py
./tests/dask/test_mag_MVI_Octree.py
./tests/dask/test_DC_jvecjtvecadj_dask.py
./tests/dask/test_mag_inversion_linear_Octree.py
./tests/dask/test_mag_nonLinear_Amplitude.py
./tests/utils/test_io_utils.py
./tests/utils/__init__.py
./tests/utils/test_mat_utils.py
./tests/utils/test_report.py
./tests/utils/test_deprecate.py
./tests/utils/test_gmm_utils.py
./tests/utils/test_solverwrap.py
./tests/flow/__init__.py
./tests/flow/test_Richards_empirical.py
./tests/flow/test_Richards.py
./tests/pf/test_sensitivity_PFproblem.py
./tests/pf/test_forward_Mag_Linear.py
./tests/pf/test_mag_vector_amplitude.py
./tests/pf/test_pf_quadtree_inversion_linear.py
./tests/pf/test_survey_counting.py
./tests/pf/__init__.py
./tests/pf/test_forward_Grav_Linear.py
./tests/pf/test_gravity_IO.py
./tests/pf/test_mag_inversion_linear.py
./tests/pf/test_grav_inversion_linear.py
./tests/pf/test_forward_PFproblem.py
./tests/pf/test_mag_MVI_Octree.py
./tests/pf/test_magnetics_IO.py
./tests/pf/test_magnetics_analytics.py
./tests/pf/test_mag_inversion_linear_Octree.py
./tests/pf/test_mag_nonLinear_Amplitude.py
./tests/examples/test_examples_2.py
./tests/examples/test_examples_3.py
./tests/examples/test_tutorials_3.py
./tests/examples/test_tutorials_1.py
./tests/examples/test_examples_1.py
./tests/examples/test_tutorials_2.py
./tests/base/test_problem.py
./tests/base/test_jtv.py
./tests/base/test_pgi_regularization.py
./tests/base/test_Props.py
./tests/base/test_maps.py
./tests/base/test_coordutils.py
./tests/base/test_optimizers.py
./tests/base/__init__.py
./tests/base/test_data.py
./tests/base/test_survey_data.py
./tests/base/test_Fields.py
./tests/base/test_correspondance.py
./tests/base/test_directives.py
./tests/base/test_objective_function.py
./tests/base/test_Solver.py
./tests/base/test_joint.py
./tests/base/test_model_utils.py
./tests/base/test_regularization.py
./tests/base/test_utils.py
./tests/base/test_cross_gradient.py
./tests/base/test_validators.py
./tests/base/test_data_misfit.py
./tests/base/test_simulation.py
./tests/base/test_mass_matrices.py
./tests/docs/test_docs.py
./tests/meta/test_multiprocessing_sim.py
./tests/meta/test_meta_sim.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/hg.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/discover.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_file_finders/hg.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_file_finders/__init__.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_file_finders/pathtools.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_file_finders/git.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_modify_version.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/hg_git.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_log.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/__init__.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/version.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/fallbacks.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_types.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_integration/__init__.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_integration/pyproject_reading.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_integration/dump_version.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_integration/toml.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_integration/setuptools.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_cli.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/scm_workdir.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_version_cls.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/git.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_overrides.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_entrypoints.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/integration.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/__main__.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_run_cmd.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_config.py
./.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_get_version_impl.py
./examples/04-dcip/plot_dc_analytic.py
./examples/04-dcip/plot_inv_dcip_dipoledipole_parametric_inversion.py
./examples/04-dcip/plot_read_DC_data_with_IO_class.py
./examples/04-dcip/plot_inv_dcip_dipoledipole_3Dinversion_twospheres.py
./examples/06-tdem/plot_fwd_tdem_3d_model.py
./examples/06-tdem/plot_0_tdem_analytic.py
./examples/06-tdem/plot_inv_tdem_1D_raw_waveform.py
./examples/06-tdem/plot_inv_tdem_1D.py
./examples/06-tdem/plot_fwd_tdem_waveforms.py
./examples/06-tdem/plot_fwd_tdem_inductive_src_permeable_target.py
./examples/_archived/plot_inv_dcip_2_5Dinversion.py
./examples/_archived/plot_inv_grav_linear.py
./examples/_archived/plot_inv_mag_linear.py
./examples/_archived/plot_inv_dcip_dipoledipole_2_5Dinversion_irls.py
./examples/_archived/plot_inv_dcip_dipoledipole_2_5Dinversion.py
./examples/07-nsem/plot_fwd_nsem_MTTipper3D.py
./examples/01-maps/plot_layer.py
./examples/01-maps/plot_sumMap.py
./examples/01-maps/plot_combo.py
./examples/01-maps/plot_block_in_layer.py
./examples/01-maps/plot_mesh2mesh.py
./examples/10-pgi/plot_inv_1_PGI_Linear_1D_joint_WithRelationships.py
./examples/10-pgi/plot_inv_0_PGI_Linear_1D.py
./examples/05-fdem/plot_inv_fdem_loop_loop_2Dinversion.py
./examples/05-fdem/plot_0_fdem_analytic.py
./examples/08-vrm/plot_inv_vrm_eq.py
./examples/08-vrm/plot_fwd_vrm.py
./examples/02-gravity/plot_inv_grav_tiled.py
./examples/03-magnetics/plot_inv_mag_MVI_VectorAmplitude.py
./examples/03-magnetics/plot_0_analytic.py
./examples/03-magnetics/plot_inv_mag_MVI_Sparse_TreeMesh.py
./examples/03-magnetics/plot_inv_mag_nonLinear_Amplitude.py
./examples/09-flow/plot_fwd_flow_richards_1D.py
./examples/09-flow/plot_inv_flow_richards_1D.py
./examples/20-published/plot_booky_1D_time_freq_inv.py
./examples/20-published/plot_schenkel_morrison_casing.py
./examples/20-published/plot_load_booky.py
./examples/20-published/plot_tomo_joint_with_volume.py
./examples/20-published/plot_effective_medium_theory.py
./examples/20-published/plot_booky_1Dstitched_resolve_inv.py
./examples/20-published/plot_vadose_vangenuchten.py
./examples/20-published/plot_heagyetal2017_casing.py
./examples/20-published/plot_laguna_del_maule_inversion.py
./examples/20-published/plot_richards_celia1990.py
./examples/20-published/plot_heagyetal2017_cyl_inversions.py
./docs/conf.py
./setup.py
./SimPEG/maps.py
./SimPEG/electromagnetics/natural_source/receivers.py
./SimPEG/electromagnetics/natural_source/__init__.py
./SimPEG/electromagnetics/natural_source/utils/plot_utils.py
./SimPEG/electromagnetics/natural_source/utils/data_viewer.py
./SimPEG/electromagnetics/natural_source/utils/__init__.py
./SimPEG/electromagnetics/natural_source/utils/plot_data_types.py
./SimPEG/electromagnetics/natural_source/utils/analytic_1d.py
./SimPEG/electromagnetics/natural_source/utils/data_utils.py
./SimPEG/electromagnetics/natural_source/utils/solutions_1d.py
./SimPEG/electromagnetics/natural_source/utils/test_utils.py
./SimPEG/electromagnetics/natural_source/utils/edi_files_utils.py
./SimPEG/electromagnetics/natural_source/utils/source_utils.py
./SimPEG/electromagnetics/natural_source/sources.py
./SimPEG/electromagnetics/natural_source/simulation_1d.py
./SimPEG/electromagnetics/natural_source/survey.py
./SimPEG/electromagnetics/natural_source/fields.py
./SimPEG/electromagnetics/natural_source/simulation.py
./SimPEG/electromagnetics/__init__.py
./SimPEG/electromagnetics/analytics/TDEM.py
./SimPEG/electromagnetics/analytics/DC.py
./SimPEG/electromagnetics/analytics/__init__.py
./SimPEG/electromagnetics/analytics/FDEMDipolarfields.py
./SimPEG/electromagnetics/analytics/FDEM.py
./SimPEG/electromagnetics/analytics/FDEMcasing.py
./SimPEG/electromagnetics/analytics/NSEM.py
./SimPEG/electromagnetics/utils/em1d_utils.py
./SimPEG/electromagnetics/utils/testing_utils.py
./SimPEG/electromagnetics/utils/__init__.py
./SimPEG/electromagnetics/utils/waveform_utils.py
./SimPEG/electromagnetics/utils/current_utils.py
./SimPEG/electromagnetics/static/resistivity/receivers.py
./SimPEG/electromagnetics/static/resistivity/__init__.py
./SimPEG/electromagnetics/static/resistivity/simulation_2d.py
./SimPEG/electromagnetics/static/resistivity/run.py
./SimPEG/electromagnetics/static/resistivity/utils.py
./SimPEG/electromagnetics/static/resistivity/sources.py
./SimPEG/electromagnetics/static/resistivity/simulation_1d.py
./SimPEG/electromagnetics/static/resistivity/survey.py
./SimPEG/electromagnetics/static/resistivity/fields.py
./SimPEG/electromagnetics/static/resistivity/fields_2d.py
./SimPEG/electromagnetics/static/resistivity/simulation.py
./SimPEG/electromagnetics/static/resistivity/IODC.py
./SimPEG/electromagnetics/static/spectral_induced_polarization/receivers.py
./SimPEG/electromagnetics/static/spectral_induced_polarization/data.py
./SimPEG/electromagnetics/static/spectral_induced_polarization/__init__.py
./SimPEG/electromagnetics/static/spectral_induced_polarization/simulation_2d.py
./SimPEG/electromagnetics/static/spectral_induced_polarization/run.py
./SimPEG/electromagnetics/static/spectral_induced_polarization/sources.py
./SimPEG/electromagnetics/static/spectral_induced_polarization/survey.py
./SimPEG/electromagnetics/static/spectral_induced_polarization/simulation.py
./SimPEG/electromagnetics/static/__init__.py
./SimPEG/electromagnetics/static/utils/static_utils.py
./SimPEG/electromagnetics/static/utils/__init__.py
./SimPEG/electromagnetics/static/induced_polarization/__init__.py
./SimPEG/electromagnetics/static/induced_polarization/run.py
./SimPEG/electromagnetics/static/induced_polarization/survey.py
./SimPEG/electromagnetics/static/induced_polarization/simulation.py
./SimPEG/electromagnetics/static/spontaneous_potential/__init__.py
./SimPEG/electromagnetics/static/spontaneous_potential/sources.py
./SimPEG/electromagnetics/static/spontaneous_potential/simulation.py
./SimPEG/electromagnetics/base_1d.py
./SimPEG/electromagnetics/frequency_domain/receivers.py
./SimPEG/electromagnetics/frequency_domain/__init__.py
./SimPEG/electromagnetics/frequency_domain/sources.py
./SimPEG/electromagnetics/frequency_domain/simulation_1d.py
./SimPEG/electromagnetics/frequency_domain/survey.py
./SimPEG/electromagnetics/frequency_domain/fields.py
./SimPEG/electromagnetics/frequency_domain/simulation.py
./SimPEG/electromagnetics/viscous_remanent_magnetization/receivers.py
./SimPEG/electromagnetics/viscous_remanent_magnetization/__init__.py
./SimPEG/electromagnetics/viscous_remanent_magnetization/waveforms.py
./SimPEG/electromagnetics/viscous_remanent_magnetization/sources.py
./SimPEG/electromagnetics/viscous_remanent_magnetization/survey.py
./SimPEG/electromagnetics/viscous_remanent_magnetization/simulation.py
./SimPEG/electromagnetics/time_domain/receivers.py
./SimPEG/electromagnetics/time_domain/__init__.py
./SimPEG/electromagnetics/time_domain/sources.py
./SimPEG/electromagnetics/time_domain/simulation_1d.py
./SimPEG/electromagnetics/time_domain/survey.py
./SimPEG/electromagnetics/time_domain/fields.py
./SimPEG/electromagnetics/time_domain/simulation.py
./SimPEG/electromagnetics/base.py
./SimPEG/data.py
./SimPEG/seismic/__init__.py
./SimPEG/seismic/straight_ray_tomography/__init__.py
./SimPEG/seismic/straight_ray_tomography/survey.py
./SimPEG/seismic/straight_ray_tomography/simulation.py
./SimPEG/__init__.py
./SimPEG/optimization.py
./SimPEG/dask/electromagnetics/__init__.py
./SimPEG/dask/electromagnetics/static/resistivity/__init__.py
./SimPEG/dask/electromagnetics/static/resistivity/simulation.py
./SimPEG/dask/electromagnetics/static/__init__.py
./SimPEG/dask/electromagnetics/static/induced_polarization/__init__.py
./SimPEG/dask/electromagnetics/static/induced_polarization/simulation.py
./SimPEG/dask/__init__.py
./SimPEG/dask/utils.py
./SimPEG/dask/simulation.py
./SimPEG/dask/potential_fields/__init__.py
./SimPEG/dask/potential_fields/magnetics/__init__.py
./SimPEG/dask/potential_fields/magnetics/simulation.py
./SimPEG/dask/potential_fields/gravity/__init__.py
./SimPEG/dask/potential_fields/gravity/simulation.py
./SimPEG/dask/potential_fields/base.py
./SimPEG/utils/io_utils/io_utils_general.py
./SimPEG/utils/io_utils/io_utils_pf.py
./SimPEG/utils/io_utils/__init__.py
./SimPEG/utils/io_utils/io_utils_electromagnetics.py
./SimPEG/utils/plot_utils.py
./SimPEG/utils/curv_utils.py
./SimPEG/utils/mesh_utils.py
./SimPEG/utils/model_builder.py
./SimPEG/utils/__init__.py
./SimPEG/utils/code_utils.py
./SimPEG/utils/mat_utils.py
./SimPEG/utils/model_utils.py
./SimPEG/utils/drivers/__init__.py
./SimPEG/utils/drivers/gravity_driver.py
./SimPEG/utils/drivers/magnetics_driver.py
./SimPEG/utils/counter_utils.py
./SimPEG/utils/pgi_utils.py
./SimPEG/utils/solver_utils.py
./SimPEG/utils/coord_utils.py
./SimPEG/version.py
./SimPEG/regularization/vector.py
./SimPEG/regularization/pgi.py
./SimPEG/regularization/cross_gradient.py
./SimPEG/regularization/__init__.py
./SimPEG/regularization/correspondence.py
./SimPEG/regularization/regularization_mesh.py
./SimPEG/regularization/sparse.py
./SimPEG/regularization/jtv.py
./SimPEG/regularization/base.py
./SimPEG/objective_function.py
./SimPEG/props.py
./SimPEG/inverse_problem.py
./SimPEG/models.py
./SimPEG/data_misfit.py
./SimPEG/flow/__init__.py
./SimPEG/flow/richards/receivers.py
./SimPEG/flow/richards/empirical.py
./SimPEG/flow/richards/__init__.py
./SimPEG/flow/richards/survey.py
./SimPEG/flow/richards/simulation.py
./SimPEG/survey.py
./SimPEG/base/__init__.py
./SimPEG/base/pde_simulation.py
./SimPEG/fields.py
./SimPEG/simulation.py
./SimPEG/inversion.py
./SimPEG/directives/directives.py
./SimPEG/directives/__init__.py
./SimPEG/directives/pgi_directives.py
./SimPEG/directives/sim_directives.py
./SimPEG/potential_fields/__init__.py
./SimPEG/potential_fields/magnetics/receivers.py
./SimPEG/potential_fields/magnetics/__init__.py
./SimPEG/potential_fields/magnetics/sources.py
./SimPEG/potential_fields/magnetics/survey.py
./SimPEG/potential_fields/magnetics/simulation.py
./SimPEG/potential_fields/magnetics/analytics.py
./SimPEG/potential_fields/gravity/receivers.py
./SimPEG/potential_fields/gravity/__init__.py
./SimPEG/potential_fields/gravity/_numba_functions.py
./SimPEG/potential_fields/gravity/sources.py
./SimPEG/potential_fields/gravity/survey.py
./SimPEG/potential_fields/gravity/simulation.py
./SimPEG/potential_fields/gravity/analytics.py
./SimPEG/potential_fields/base.py
./SimPEG/meta/__init__.py
./SimPEG/meta/simulation.py
./SimPEG/meta/multiprocessing.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/simpeg__simpeg__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/adtzlr__felupe__0.0 && ls -R
.:
CHANGELOG.md  CODE_OF_CONDUCT.md  LICENSE    docs      pyproject.toml  tests
CITATION.cff  CONTRIBUTING.md     README.md  examples  src             tox.ini

./docs:
Makefile  conf.py  felupe.rst  howto.rst  make.bat
_static   felupe   howto       index.rst  tutorial

./docs/_static:
benchmark.png                      logo.png
custom.css                         logo.svg
engine-mount_animation.mp4         logo_dark.svg
ex06_rubber-metal-spring_mesh.vtk  logo_light.svg
ex07_engine-mount_mesh-air.vtk     mesh.vtk
ex07_engine-mount_mesh-metal.vtk   readme_animation.mp4
ex07_engine-mount_mesh-rubber.vtk  social_preview.svg

./docs/felupe:
assembly.rst      element.rst  mechanics.rst   region.rst
constitution.rst  field.rst    mesh.rst        tools.rst
dof.rst           math.rst     quadrature.rst

./docs/howto:
axi.rst        meshgen.rst  rbe2.rst   solvers.rst  umat.rst
composite.rst  mixed.rst    solid.rst  torsion.rst  umat_hyperelasticity.rst

./docs/tutorial:
examples

./docs/tutorial/examples:
README.rst                          extut04_elementary_deformations.py
extut01_getting_started.py          result.h5
extut02_job.py                      result.vtk
extut03_building_blocks.py          result.xdmf
extut03_building_blocks_sketch.svg  result_with_cauchy.vtk

./examples:
README.rst                       ex06_rubber-metal-spring_mesh.vtk
ex01_beam.py                     ex07_engine-mount.py
ex01_beam_sketch.png             ex07_engine-mount_mesh-air.vtk
ex02_plate-with-hole.py          ex07_engine-mount_mesh-metal.vtk
ex02_plate-with-hole_sketch.svg  ex07_engine-mount_mesh-rubber.vtk
ex03_plasticity.py               ex08_shear.py
ex03_plasticity_sketch.png       ex08_shear_sketch.svg
ex03_plasticity_sketch.svg       ex09_numeric-continuation.py
ex04_balloon.py                  ex10_poisson-equation.py
ex04_balloon_sketch.png          ex11_notch-stress.py
ex04_balloon_sketch.svg          ex12_foot-bone.py
ex05_rubber-metal-bushing.py     ex13_morph-rubber-wheel.py
ex06_rubber-metal-spring.py

./src:
felupe  felupe.egg-info

./src/felupe:
__about__.py  assembly      dof      field  mechanics  quadrature  solve
__init__.py   constitution  element  math   mesh       region      tools

./src/felupe/assembly:
__init__.py  _axi.py  _cartesian.py  _integral.py  expression

./src/felupe/assembly/expression:
__init__.py  _bilinear.py   _expression.py  _mixed.py
_basis.py    _decorator.py  _linear.py

./src/felupe/constitution:
__init__.py     _material.py     _view.py           pseudo_elasticity
_base.py        _material_ad.py  hyperelasticity    small_strain
_kinematics.py  _mixed.py        linear_elasticity

./src/felupe/constitution/hyperelasticity:
__init__.py       _neo_hooke_compressible.py           _volumetric.py
_hyperelastic.py  _neo_hooke_nearly_incompressible.py  models

./src/felupe/constitution/hyperelasticity/models:
__init__.py                     _helpers.py         _saint_venant_kirchhoff.py
_alexander.py                   _mooney_rivlin.py   _third_order_deformation.py
_arruda_boyce.py                _neo_hooke.py       _van_der_waals.py
_extended_tube.py               _ogden.py           _yeoh.py
_finite_strain_viscoelastic.py  _ogden_roxburgh.py

./src/felupe/constitution/linear_elasticity:
__init__.py         _linear_elastic.py
_lame_converter.py  _linear_elastic_large_strain.py

./src/felupe/constitution/pseudo_elasticity:
__init__.py  _ogden_roxburgh.py

./src/felupe/constitution/small_strain:
__init__.py  _material_strain.py  models

./src/felupe/constitution/small_strain/models:
__init__.py  _linear_elastic.py  _linear_elastic_plastic_isotropic.py

./src/felupe/dof:
__init__.py  _boundary.py  _loadcase.py  _tools.py

./src/felupe/element:
__init__.py  _hexahedron.py  _line.py  _tetra.py
_base.py     _lagrange.py    _quad.py  _triangle.py

./src/felupe/field:
__init__.py  _base.py       _dual.py      _fields.py   _planestrain.py
_axi.py      _container.py  _evaluate.py  _indices.py

./src/felupe/math:
__init__.py  _field.py  _math.py  _solve.py  _spatial.py  _tensor.py

./src/felupe/mechanics:
__init__.py  _job.py         _solidbody_gravity.py
_curve.py    _multipoint.py  _solidbody_incompressible.py
_helpers.py  _pointload.py   _solidbody_pressure.py
_item.py     _solidbody.py   _step.py

./src/felupe/mesh:
__init__.py    _discrete_geometry.py  _helpers.py              _read.py
_container.py  _dual.py               _line_rectangle_cube.py  _tools.py
_convert.py    _geometry.py           _mesh.py

./src/felupe/quadrature:
__init__.py  _gausslegendre.py  _scheme.py  _sphere.py  _tetra.py  _triangle.py

./src/felupe/region:
__init__.py  _boundary.py  _region.py  _templates.py

./src/felupe/solve:
__init__.py  _solve.py

./src/felupe/tools:
__init__.py  _newton.py  _post.py     _save.py
_misc.py     _plot.py    _project.py  _solve.py

./src/felupe.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt

./tests:
__init__.py                  test_dof.py        test_mpc.py
mesh.bdf                     test_element.py    test_planestrain.py
mesh_no-cells.bdf            test_field.py      test_plot.py
test_basis.py                test_form.py       test_quadrature.py
test_bilinearform.py         test_job.py        test_readme.py
test_composite.py            test_math.py       test_region.py
test_constitution.py         test_mechanics.py  test_solve.py
test_constitution_newton.py  test_mesh.py       test_tools.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/adtzlr__felupe__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/fides-dev__fides__0.0 && ls -R
.:
CITATION.cff  README.md  fides           setup.cfg  tests
LICENSE.md    docs       fides.egg-info  setup.py

./docs:
_templates  about.rst  api.rst  conf.py  index.rst  requirements.txt

./docs/_templates:
autosummary

./docs/_templates/autosummary:
module.rst

./fides:
__init__.py               logging.py   steps.py         version.py
constants.py              minimize.py  subproblem.py
hessian_approximation.py  stepback.py  trust_region.py

./fides.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt

./tests:
__init.py  test_hessian_approximation.py  test_minimize.py  test_subproblem.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/fides-dev__fides__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/pypa__wheel__0.0 && ls -l
total 24
-rw-rw-r-- 1 root root 1107 Jan 18 21:22 LICENSE.txt
-rw-rw-r-- 1 root root  940 Jan 18 21:22 README.rst
drwxr-xr-x 4 root root 4096 Jan 18 21:22 docs
-rw-rw-r-- 1 root root 3400 Jan 18 21:22 pyproject.toml
drwxr-xr-x 3 root root 4096 Jan 18 21:14 src
drwxr-xr-x 4 root root 4096 Jan 18 21:22 tests[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/pypa__wheel__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/fatiando__harmonica__0.0 && ls -R
.:
AUTHORS.md          Makefile         examples              setup.cfg
CODE_OF_CONDUCT.md  README.rst       harmonica             setup.py
CONTRIBUTING.md     __pycache__      harmonica.egg-info    versioneer.py
LICENSE.txt         data             pytest.ini
MAINTENANCE.md      doc              requirements-dev.txt
MANIFEST.in         environment.yml  requirements.txt

./__pycache__:
versioneer.cpython-39.pyc

./data:
README.md            geoid-earth-0.5deg.nc.xz    south-africa-gravity.ast.xz
etopo1-0.5deg.nc.xz  gravity-earth-0.5deg.nc.xz
examples             rio-magnetic.csv.xz

./data/examples:
README.txt      earth_gravity.py     rio_magnetic.py
earth_geoid.py  earth_topography.py  south_africa_gravity.py

./doc:
Makefile  _templates  conf.py    install.rst
_static   api         index.rst  references.rst

./doc/_static:
favicon.png  harmonica-logo.png  readme-banner.png  style.css
figures      harmonica-logo.svg  readme-banner.svg

./doc/_static/figures:
airy-isostasy.svg

./doc/_templates:
autosummary  breadcrumbs.html  layout.html

./doc/_templates/autosummary:
base.rst  class.rst  exception.rst  function.rst  module.rst

./doc/api:
index.rst

./examples:
README.txt  gravity_disturbance.py           normal_gravity.py
eql         gravity_disturbance_topofree.py
forward     isostasy_airy.py

./examples/eql:
README.txt  harmonic.py

./examples/forward:
README.txt  point_mass.py  tesseroid.py

./harmonica:
__init__.py   coordinates.py  equivalent_layer        io.py        version.py
_version.py   datasets        forward                 isostasy.py
constants.py  ellipsoid.py    gravity_corrections.py  tests

./harmonica/datasets:
__init__.py  registry.txt  sample_data.py

./harmonica/equivalent_layer:
__init__.py  harmonic.py

./harmonica/forward:
__init__.py  point_mass.py  tesseroid.py  utils.py

./harmonica/tests:
__init__.py          test_eql_harmonic.py         test_isostasy.py     utils.py
data                 test_forward_utils.py        test_point_mass.py
test_coordinates.py  test_gravity_corrections.py  test_sample_data.py
test_ellipsoid.py    test_icgem.py                test_tesseroid.py

./harmonica/tests/data:
icgem-sample-with-height.gdf  icgem-sample.gdf

./harmonica.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/fatiando__harmonica__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
find /workspace/runpod__runpod-python__0.0 -type f -name "*.py"
/workspace/runpod__runpod-python__0.0/runpod/_version.py
/workspace/runpod__runpod-python__0.0/runpod/user_agent.py
/workspace/runpod__runpod-python__0.0/runpod/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/api/mutations/container_register_auth.py
/workspace/runpod__runpod-python__0.0/runpod/api/mutations/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/api/mutations/templates.py
/workspace/runpod__runpod-python__0.0/runpod/api/mutations/endpoints.py
/workspace/runpod__runpod-python__0.0/runpod/api/mutations/pods.py
/workspace/runpod__runpod-python__0.0/runpod/api/mutations/user.py
/workspace/runpod__runpod-python__0.0/runpod/api/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/api/ctl_commands.py
/workspace/runpod__runpod-python__0.0/runpod/api/graphql.py
/workspace/runpod__runpod-python__0.0/runpod/api/queries/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/api/queries/endpoints.py
/workspace/runpod__runpod-python__0.0/runpod/api/queries/gpus.py
/workspace/runpod__runpod-python__0.0/runpod/api/queries/pods.py
/workspace/runpod__runpod-python__0.0/runpod/api/queries/user.py
/workspace/runpod__runpod-python__0.0/runpod/tracer.py
/workspace/runpod__runpod-python__0.0/runpod/version.py
/workspace/runpod__runpod-python__0.0/runpod/error.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/worker.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/rp_fastapi.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/worker_state.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/rp_logger.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/rp_progress.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/rp_ping.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/rp_local.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/rp_scale.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/rp_job.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/rp_handler.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/rp_http.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/modules/rp_tips.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/utils/rp_cleanup.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/utils/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/utils/rp_validator.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/utils/rp_download.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/utils/rp_cuda.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/utils/rp_debugger.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/utils/rp_upload.py
/workspace/runpod__runpod-python__0.0/runpod/serverless/core.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/ssh/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/ssh/commands.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/ssh/functions.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/project/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/project/starter_templates/default/src/handler.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/project/starter_templates/llama2/src/handler.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/project/commands.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/project/helpers.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/project/functions.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/pod/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/pod/commands.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/exec/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/exec/commands.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/exec/helpers.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/exec/functions.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/config/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/config/commands.py
/workspace/runpod__runpod-python__0.0/runpod/cli/groups/config/functions.py
/workspace/runpod__runpod-python__0.0/runpod/cli/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/cli/utils/rp_sync.py
/workspace/runpod__runpod-python__0.0/runpod/cli/utils/rp_info.py
/workspace/runpod__runpod-python__0.0/runpod/cli/utils/ssh_cmd.py
/workspace/runpod__runpod-python__0.0/runpod/cli/utils/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/cli/utils/rp_runpodignore.py
/workspace/runpod__runpod-python__0.0/runpod/cli/utils/rp_userspace.py
/workspace/runpod__runpod-python__0.0/runpod/cli/entry.py
/workspace/runpod__runpod-python__0.0/runpod/http_client.py
/workspace/runpod__runpod-python__0.0/runpod/endpoint/runner.py
/workspace/runpod__runpod-python__0.0/runpod/endpoint/asyncio/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/endpoint/asyncio/asyncio_runner.py
/workspace/runpod__runpod-python__0.0/runpod/endpoint/__init__.py
/workspace/runpod__runpod-python__0.0/runpod/endpoint/helpers.py
/workspace/runpod__runpod-python__0.0/setup.py
/workspace/runpod__runpod-python__0.0/examples/endpoints/asyncio_job_request.py
/workspace/runpod__runpod-python__0.0/examples/endpoints/streaming.py
/workspace/runpod__runpod-python__0.0/examples/endpoints/run_sync.py
/workspace/runpod__runpod-python__0.0/examples/endpoints/health.py
/workspace/runpod__runpod-python__0.0/examples/endpoints/run.py
/workspace/runpod__runpod-python__0.0/examples/api/get_endpoints.py
/workspace/runpod__runpod-python__0.0/examples/api/create_template.py
/workspace/runpod__runpod-python__0.0/examples/api/create_container_registry_auth.py
/workspace/runpod__runpod-python__0.0/examples/api/create_endpoint.py
/workspace/runpod__runpod-python__0.0/examples/graphql_wrapper.py
/workspace/runpod__runpod-python__0.0/examples/serverless/simple_handler.py
/workspace/runpod__runpod-python__0.0/examples/serverless/concurrent_handler.py
/workspace/runpod__runpod-python__0.0/examples/serverless/logger.py
/workspace/runpod__runpod-python__0.0/tests/test_endpoint/__init__.py
/workspace/runpod__runpod-python__0.0/tests/test_endpoint/test_asyncio_runner.py
/workspace/runpod__runpod-python__0.0/tests/test_endpoint/test_runner.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/__init__.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/test_config_functions.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/test_exec_functions.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/test_project_functions.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/__init__.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/test_ssh_commands.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/test_config_commands.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/test_pod_commands.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/test_ssh_functions.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/test_exec_commands.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/test_project_helpers.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/test_exec_helpers.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_groups/test_project_commands.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_utils/test_ssh_cmd.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_utils/__init__.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_utils/test_sync.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_utils/test_userspace.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_utils/test_info.py
/workspace/runpod__runpod-python__0.0/tests/test_cli/test_cli_utils/test_runpodignore.py
/workspace/runpod__runpod-python__0.0/tests/test_tracer.py
/workspace/runpod__runpod-python__0.0/tests/test_error.py
/workspace/runpod__runpod-python__0.0/tests/__init__.py
/workspace/runpod__runpod-python__0.0/tests/test_shared/test_auth.py
/workspace/runpod__runpod-python__0.0/tests/test_shared/__init__.py
/workspace/runpod__runpod-python__0.0/tests/test_whatever.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_modules/test_http.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_modules/__init__.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_modules/test_progress.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_modules/test_ping.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_modules/test_state.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_modules/test_job.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_modules/test_tips.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_modules/test_fastapi.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_modules/test_local.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_modules/test_logger.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_modules/test_handler.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/__init__.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_utils/__init__.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_utils/test_cleanup.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_utils/test_download.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_utils/test_cuda.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_utils/test_upload.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_utils/test_debugger.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_utils/test_validate.py
/workspace/runpod__runpod-python__0.0/tests/test_serverless/test_worker.py
/workspace/runpod__runpod-python__0.0/tests/test_user_agent.py
/workspace/runpod__runpod-python__0.0/tests/whatever.py
/workspace/runpod__runpod-python__0.0/tests/test_version.py
/workspace/runpod__runpod-python__0.0/tests/test_api/test_ctl_commands.py
/workspace/runpod__runpod-python__0.0/tests/test_api/__init__.py
/workspace/runpod__runpod-python__0.0/tests/test_api/test_mutations_pods.py
/workspace/runpod__runpod-python__0.0/tests/test_api/test_mutations_templates.py
/workspace/runpod__runpod-python__0.0/tests/test_api/test_mutation_endpoints.py
/workspace/runpod__runpod-python__0.0/tests/test_api/test_mutation_container_registry_auth.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/runpod__runpod-python__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/mondeja__mkdocs-include-markdown-plugin__0.0 && ls -R
.:
CONTRIBUTING.md  README.md    examples  lychee.toml     schema.json  src
LICENSE          codecov.yml  locale    pyproject.toml  setup.py     tests

./examples:
a-lot-of-includes  global-exclude        start-end-not-found-warnings
basic              http-cache            table-as-list-item
custom-tags        include-to-list-item
frontmatters       long-line

./examples/a-lot-of-includes:
docs  mkdocs.yml

./examples/a-lot-of-includes/docs:
barbaz.svg  included.md  includes  index.md

./examples/a-lot-of-includes/docs/includes:
00.md  01.md  02.md  03.md

./examples/basic:
docs  mkdocs.yml

./examples/basic/docs:
included.md  index.md

./examples/custom-tags:
docs  mkdocs.yml

./examples/custom-tags/docs:
included.md  index.md

./examples/frontmatters:
docs  mkdocs.yml

./examples/frontmatters/docs:
bad-multimarkdown.md  good-multimarkdown.md  index.md
bad-yaml.md           good-yaml.md

./examples/global-exclude:
docs  mkdocs.yml

./examples/global-exclude/docs:
api  include.txt  index.md  license.md

./examples/global-exclude/docs/api:
bar.md  baz  foo.md

./examples/global-exclude/docs/api/baz:
qux.md

./examples/http-cache:
docs  mkdocs.yml

./examples/http-cache/docs:
README.md

./examples/include-to-list-item:
docs  included.md  mkdocs.yml

./examples/include-to-list-item/docs:
index.md

./examples/long-line:
docs  mkdocs.yml

./examples/long-line/docs:
index.md

./examples/start-end-not-found-warnings:
docs  mkdocs.yml

./examples/start-end-not-found-warnings/docs:
included.md  index.md

./examples/table-as-list-item:
docs  mkdocs.yml

./examples/table-as-list-item/docs:
index.md  table.md

./locale:
es  fr

./locale/es:
README.md  README.md.po

./locale/fr:
README.md  README.md.po

./src:
mkdocs_include_markdown_plugin

./src/mkdocs_include_markdown_plugin:
__init__.py  config.py     event.py          logger.py  process.py
cache.py     directive.py  files_watcher.py  plugin.py  py.typed

./tests:
__init__.py  conftest.py  test_integration  test_unit  testing_helpers.py

./tests/test_integration:
test_cache_integration.py  test_examples.py

./tests/test_unit:
test_arguments.py  test_exclude.py           test_logging.py
test_cache.py      test_glob_include.py      test_nested_includes.py
test_config.py     test_include.py           test_process.py
test_encoding.py   test_include_markdown.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/mondeja__mkdocs-include-markdown-plugin__0.0 #
[Command finished with exit code 0]