Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/oasis-open__cti-python-stix2__0.0 && ls -R
.:
CHANGELOG        MANIFEST.in  examples          setup.py        tox.ini
CONTRIBUTING.md  README.rst   requirements.txt  stix2
LICENSE          docs         setup.cfg         stix2.egg-info

./docs:
Makefile    api          conf.py           guide      index.rst
_templates  api_ref.rst  contributing.rst  guide.rst  overview.rst

./docs/_templates:
autosummary

./docs/_templates/autosummary:
module.rst

./docs/api:
confidence             stix2.exceptions.rst       stix2.v20.rst
datastore              stix2.markings.rst         stix2.v21.rst
equivalence            stix2.parsing.rst          stix2.versioning.rst
markings               stix2.pattern_visitor.rst  stix2.workbench.rst
stix2.confidence.rst   stix2.patterns.rst         v20
stix2.datastore.rst    stix2.properties.rst       v21
stix2.environment.rst  stix2.serialization.rst
stix2.equivalence.rst  stix2.utils.rst

./docs/api/confidence:
stix2.confidence.scales.rst

./docs/api/datastore:
stix2.datastore.filesystem.rst  stix2.datastore.memory.rst
stix2.datastore.filters.rst     stix2.datastore.taxii.rst

./docs/api/equivalence:
pattern                      stix2.equivalence.object.rst
stix2.equivalence.graph.rst  stix2.equivalence.pattern.rst

./docs/api/equivalence/pattern:
compare                                stix2.equivalence.pattern.transform.rst
stix2.equivalence.pattern.compare.rst  transform

./docs/api/equivalence/pattern/compare:
stix2.equivalence.pattern.compare.comparison.rst
stix2.equivalence.pattern.compare.observation.rst

./docs/api/equivalence/pattern/transform:
stix2.equivalence.pattern.transform.comparison.rst
stix2.equivalence.pattern.transform.observation.rst
stix2.equivalence.pattern.transform.specials.rst

./docs/api/markings:
stix2.markings.granular_markings.rst  stix2.markings.utils.rst
stix2.markings.object_markings.rst

./docs/api/v20:
stix2.v20.bundle.rst  stix2.v20.observables.rst  stix2.v20.sro.rst
stix2.v20.common.rst  stix2.v20.sdo.rst

./docs/api/v21:
stix2.v21.bundle.rst  stix2.v21.observables.rst  stix2.v21.sro.rst
stix2.v21.common.rst  stix2.v21.sdo.rst

./docs/guide:
creating.ipynb     equivalence.ipynb  parsing.ipynb      ts_support.ipynb
custom.ipynb       filesystem.ipynb   patterns.ipynb     versioning.ipynb
datastore.ipynb    markings.ipynb     serializing.ipynb  workbench.ipynb
environment.ipynb  memory.ipynb       taxii.ipynb

./examples:
taxii_example.py

./stix2:
__init__.py       environment.py      patterns.py       utils.py
base.py           equivalence         properties.py     v20
canonicalization  exceptions.py       registration.py   v21
confidence        markings            registry.py       version.py
custom.py         parsing.py          serialization.py  versioning.py
datastore         pattern_visitor.py  test              workbench.py

./stix2/canonicalization:
Canonicalize.py  NumberToJson.py  __init__.py

./stix2/confidence:
__init__.py  scales.py

./stix2/datastore:
__init__.py  filesystem.py  filters.py  memory.py  taxii.py

./stix2/equivalence:
__init__.py  graph  object  pattern

./stix2/equivalence/graph:
__init__.py

./stix2/equivalence/object:
__init__.py

./stix2/equivalence/pattern:
__init__.py  compare  transform

./stix2/equivalence/pattern/compare:
__init__.py  comparison.py  observation.py

./stix2/equivalence/pattern/transform:
__init__.py  comparison.py  observation.py  specials.py

./stix2/markings:
__init__.py  granular_markings.py  object_markings.py  utils.py

./stix2/test:
__init__.py                  test_spec_version_detect.py  v20
test_pattern_equivalence.py  test_utils_type_checks.py    v21
test_properties.py           test_workbench.py

./stix2/test/v20:
__init__.py                   test_indicator.py
conftest.py                   test_intrusion_set.py
constants.py                  test_kill_chain_phases.py
stix2_data                    test_malware.py
test_attack_pattern.py        test_marking_definition.py
test_base.py                  test_markings.py
test_bundle.py                test_object_markings.py
test_campaign.py              test_observed_data.py
test_course_of_action.py      test_parsing.py
test_custom.py                test_pattern_equivalence.py
test_datastore.py             test_pattern_expressions.py
test_datastore_composite.py   test_pickle.py
test_datastore_filesystem.py  test_properties.py
test_datastore_filters.py     test_relationship.py
test_datastore_memory.py      test_report.py
test_datastore_taxii.py       test_sighting.py
test_environment.py           test_threat_actor.py
test_external_reference.py    test_tool.py
test_fixtures.py              test_utils.py
test_granular_markings.py     test_versioning.py
test_identity.py              test_vulnerability.py

./stix2/test/v20/stix2_data:
attack-pattern    identity       malware             relationship
course-of-action  intrusion-set  marking-definition  tool

./stix2/test/v20/stix2_data/attack-pattern:
attack-pattern--0a3ead4e-6d47-4ccb-854c-a6a4f9d96b22
attack-pattern--0f20e3cb-245b-4a61-8a91-2d93f7cb0e9b
attack-pattern--774a3188-6ba9-4dc4-879d-d54ee48a5ce9
attack-pattern--7e150503-88e7-4861-866b-ff1ac82c4475
attack-pattern--ae676644-d2d2-41b7-af7e-9bed1b55898c
attack-pattern--b3d682b6-98f2-4fb0-aa3b-b4df007ca70a

./stix2/test/v20/stix2_data/attack-pattern/attack-pattern--0a3ead4e-6d47-4ccb-854c-a6a4f9d96b22:
20170531213019735010.json

./stix2/test/v20/stix2_data/attack-pattern/attack-pattern--0f20e3cb-245b-4a61-8a91-2d93f7cb0e9b:
20170531213026496201.json

./stix2/test/v20/stix2_data/attack-pattern/attack-pattern--774a3188-6ba9-4dc4-879d-d54ee48a5ce9:
20170531213029458940.json

./stix2/test/v20/stix2_data/attack-pattern/attack-pattern--7e150503-88e7-4861-866b-ff1ac82c4475:
20170531213045139269.json

./stix2/test/v20/stix2_data/attack-pattern/attack-pattern--ae676644-d2d2-41b7-af7e-9bed1b55898c:
20170531213041022897.json

./stix2/test/v20/stix2_data/attack-pattern/attack-pattern--b3d682b6-98f2-4fb0-aa3b-b4df007ca70a:
20170531213032662702.json

./stix2/test/v20/stix2_data/course-of-action:
course-of-action--95ddb356-7ba0-4bd9-a889-247262b8946f
course-of-action--d9727aee-48b8-4fdb-89e2-4c49746ba4dd

./stix2/test/v20/stix2_data/course-of-action/course-of-action--95ddb356-7ba0-4bd9-a889-247262b8946f:
20170531213026495974.json

./stix2/test/v20/stix2_data/course-of-action/course-of-action--d9727aee-48b8-4fdb-89e2-4c49746ba4dd:
20170531213041022744.json

./stix2/test/v20/stix2_data/identity:
identity--c78cb6e5-0c4b-4611-8297-d1b8b55e40b5

./stix2/test/v20/stix2_data/identity/identity--c78cb6e5-0c4b-4611-8297-d1b8b55e40b5:
20170601000000000000.json  20181101232448446000.json

./stix2/test/v20/stix2_data/intrusion-set:
intrusion-set--a653431d-6a5e-4600-8ad3-609b5af57064
intrusion-set--f3bdec95-3d62-42d9-a840-29630f6cdc1a

./stix2/test/v20/stix2_data/intrusion-set/intrusion-set--a653431d-6a5e-4600-8ad3-609b5af57064:
20170531213149412497.json

./stix2/test/v20/stix2_data/intrusion-set/intrusion-set--f3bdec95-3d62-42d9-a840-29630f6cdc1a:
20170531213153197755.json

./stix2/test/v20/stix2_data/malware:
malware--6b616fc1-1505-48e3-8b2c-0d19337bff38
malware--6b616fc1-1505-48e3-8b2c-0d19337bff38.json
malware--92ec0cbd-2c30-44a2-b270-73f4ec949841
malware--96b08451-b27a-4ff6-893f-790e26393a8e
malware--b42378e0-f147-496f-992a-26a49705395b

./stix2/test/v20/stix2_data/malware/malware--6b616fc1-1505-48e3-8b2c-0d19337bff38:
20170531213258226477.json  20181101232448456000.json  20181101232448457000.json

./stix2/test/v20/stix2_data/malware/malware--92ec0cbd-2c30-44a2-b270-73f4ec949841:
20170531213326565056.json

./stix2/test/v20/stix2_data/malware/malware--96b08451-b27a-4ff6-893f-790e26393a8e:
20170531213248482655.json

./stix2/test/v20/stix2_data/malware/malware--b42378e0-f147-496f-992a-26a49705395b:
20170531213215263882.json

./stix2/test/v20/stix2_data/marking-definition:
marking-definition--fa42a846-8d90-4e51-bc29-71d5b4802168.json

./stix2/test/v20/stix2_data/relationship:
relationship--0d4a7788-7f3b-4df8-a498-31a38003c883
relationship--0e55ee98-0c6d-43d4-b424-b18a0036b227
relationship--1e91cd45-a725-4965-abe3-700694374432
relationship--3a3084f9-0302-4fd5-9b8a-e0db10f5345e
relationship--3a3ed0b2-0c38-441f-ac40-53b873e545d1
relationship--592d0c31-e61f-495e-a60e-70d7be59a719
relationship--70dc6b5c-c524-429e-a6ab-0dd40f0482c1
relationship--8797579b-e3be-4209-a71b-255a4d08243d

./stix2/test/v20/stix2_data/relationship/relationship--0d4a7788-7f3b-4df8-a498-31a38003c883:
20170531213327182784.json

./stix2/test/v20/stix2_data/relationship/relationship--0e55ee98-0c6d-43d4-b424-b18a0036b227:
20170531213327082801.json

./stix2/test/v20/stix2_data/relationship/relationship--1e91cd45-a725-4965-abe3-700694374432:
20170531213327018782.json

./stix2/test/v20/stix2_data/relationship/relationship--3a3084f9-0302-4fd5-9b8a-e0db10f5345e:
20170531213327100701.json

./stix2/test/v20/stix2_data/relationship/relationship--3a3ed0b2-0c38-441f-ac40-53b873e545d1:
20170531213327143973.json

./stix2/test/v20/stix2_data/relationship/relationship--592d0c31-e61f-495e-a60e-70d7be59a719:
20170531213327021562.json

./stix2/test/v20/stix2_data/relationship/relationship--70dc6b5c-c524-429e-a6ab-0dd40f0482c1:
20170531213327044387.json

./stix2/test/v20/stix2_data/relationship/relationship--8797579b-e3be-4209-a71b-255a4d08243d:
20170531213327051532.json

./stix2/test/v20/stix2_data/tool:
tool--03342581-f790-4f03-ba41-e82e67392e23
tool--242f3da3-4425-4d11-8f5c-b842886da966

./stix2/test/v20/stix2_data/tool/tool--03342581-f790-4f03-ba41-e82e67392e23:
20170531213231601148.json

./stix2/test/v20/stix2_data/tool/tool--242f3da3-4425-4d11-8f5c-b842886da966:
20170531213212684914.json

./stix2/test/v21:
__init__.py                   test_intrusion_set.py
conftest.py                   test_kill_chain_phases.py
constants.py                  test_language_content.py
stix2_data                    test_location.py
test_attack_pattern.py        test_malware.py
test_base.py                  test_malware_analysis.py
test_bundle.py                test_marking_definition.py
test_campaign.py              test_markings.py
test_confidence.py            test_note.py
test_course_of_action.py      test_object_markings.py
test_custom.py                test_observed_data.py
test_datastore.py             test_opinion.py
test_datastore_composite.py   test_parsing.py
test_datastore_filesystem.py  test_pattern_equivalence.py
test_datastore_filters.py     test_pattern_expressions.py
test_datastore_memory.py      test_pickle.py
test_datastore_taxii.py       test_properties.py
test_deterministic_ids.py     test_relationship.py
test_environment.py           test_report.py
test_external_reference.py    test_sighting.py
test_fixtures.py              test_threat_actor.py
test_granular_markings.py     test_timestamp_precision.py
test_grouping.py              test_tool.py
test_identity.py              test_utils.py
test_indicator.py             test_versioning.py
test_infrastructure.py        test_vulnerability.py

./stix2/test/v21/stix2_data:
attack-pattern    directory  intrusion-set  marking-definition  tool
course-of-action  identity   malware        relationship

./stix2/test/v21/stix2_data/attack-pattern:
attack-pattern--0a3ead4e-6d47-4ccb-854c-a6a4f9d96b22
attack-pattern--0f20e3cb-245b-4a61-8a91-2d93f7cb0e9b
attack-pattern--774a3188-6ba9-4dc4-879d-d54ee48a5ce9
attack-pattern--7e150503-88e7-4861-866b-ff1ac82c4475
attack-pattern--ae676644-d2d2-41b7-af7e-9bed1b55898c
attack-pattern--b3d682b6-98f2-4fb0-aa3b-b4df007ca70a

./stix2/test/v21/stix2_data/attack-pattern/attack-pattern--0a3ead4e-6d47-4ccb-854c-a6a4f9d96b22:
20170531213019735010.json

./stix2/test/v21/stix2_data/attack-pattern/attack-pattern--0f20e3cb-245b-4a61-8a91-2d93f7cb0e9b:
20170531213026496201.json

./stix2/test/v21/stix2_data/attack-pattern/attack-pattern--774a3188-6ba9-4dc4-879d-d54ee48a5ce9:
20170531213029458940.json

./stix2/test/v21/stix2_data/attack-pattern/attack-pattern--7e150503-88e7-4861-866b-ff1ac82c4475:
20170531213045139269.json

./stix2/test/v21/stix2_data/attack-pattern/attack-pattern--ae676644-d2d2-41b7-af7e-9bed1b55898c:
20170531213041022897.json

./stix2/test/v21/stix2_data/attack-pattern/attack-pattern--b3d682b6-98f2-4fb0-aa3b-b4df007ca70a:
20170531213032662702.json

./stix2/test/v21/stix2_data/course-of-action:
course-of-action--95ddb356-7ba0-4bd9-a889-247262b8946f
course-of-action--d9727aee-48b8-4fdb-89e2-4c49746ba4dd

./stix2/test/v21/stix2_data/course-of-action/course-of-action--95ddb356-7ba0-4bd9-a889-247262b8946f:
20170531213026495974.json

./stix2/test/v21/stix2_data/course-of-action/course-of-action--d9727aee-48b8-4fdb-89e2-4c49746ba4dd:
20170531213041022744.json

./stix2/test/v21/stix2_data/directory:
directory--572827aa-e0cd-44fd-afd5-a717a7585f39.json

./stix2/test/v21/stix2_data/identity:
identity--c78cb6e5-0c4b-4611-8297-d1b8b55e40b5

./stix2/test/v21/stix2_data/identity/identity--c78cb6e5-0c4b-4611-8297-d1b8b55e40b5:
20170601000000000000.json  20181101232448446000.json

./stix2/test/v21/stix2_data/intrusion-set:
intrusion-set--a653431d-6a5e-4600-8ad3-609b5af57064
intrusion-set--f3bdec95-3d62-42d9-a840-29630f6cdc1a

./stix2/test/v21/stix2_data/intrusion-set/intrusion-set--a653431d-6a5e-4600-8ad3-609b5af57064:
20170531213149412497.json

./stix2/test/v21/stix2_data/intrusion-set/intrusion-set--f3bdec95-3d62-42d9-a840-29630f6cdc1a:
20170531213153197755.json

./stix2/test/v21/stix2_data/malware:
malware--6b616fc1-1505-48e3-8b2c-0d19337bff38
malware--6b616fc1-1505-48e3-8b2c-0d19337bff38.json
malware--92ec0cbd-2c30-44a2-b270-73f4ec949841
malware--96b08451-b27a-4ff6-893f-790e26393a8e
malware--b42378e0-f147-496f-992a-26a49705395b

./stix2/test/v21/stix2_data/malware/malware--6b616fc1-1505-48e3-8b2c-0d19337bff38:
20170531213258226477.json  20181101232448456000.json  20181101232448457000.json

./stix2/test/v21/stix2_data/malware/malware--92ec0cbd-2c30-44a2-b270-73f4ec949841:
20170531213326565056.json

./stix2/test/v21/stix2_data/malware/malware--96b08451-b27a-4ff6-893f-790e26393a8e:
20170531213248482655.json

./stix2/test/v21/stix2_data/malware/malware--b42378e0-f147-496f-992a-26a49705395b:
20170531213215263882.json

./stix2/test/v21/stix2_data/marking-definition:
marking-definition--fa42a846-8d90-4e51-bc29-71d5b4802168.json

./stix2/test/v21/stix2_data/relationship:
relationship--0d4a7788-7f3b-4df8-a498-31a38003c883
relationship--0e55ee98-0c6d-43d4-b424-b18a0036b227
relationship--1e91cd45-a725-4965-abe3-700694374432
relationship--3a3084f9-0302-4fd5-9b8a-e0db10f5345e
relationship--3a3ed0b2-0c38-441f-ac40-53b873e545d1
relationship--592d0c31-e61f-495e-a60e-70d7be59a719
relationship--70dc6b5c-c524-429e-a6ab-0dd40f0482c1
relationship--8797579b-e3be-4209-a71b-255a4d08243d

./stix2/test/v21/stix2_data/relationship/relationship--0d4a7788-7f3b-4df8-a498-31a38003c883:
20170531213327182784.json

./stix2/test/v21/stix2_data/relationship/relationship--0e55ee98-0c6d-43d4-b424-b18a0036b227:
20170531213327082801.json

./stix2/test/v21/stix2_data/relationship/relationship--1e91cd45-a725-4965-abe3-700694374432:
20170531213327018782.json

./stix2/test/v21/stix2_data/relationship/relationship--3a3084f9-0302-4fd5-9b8a-e0db10f5345e:
20170531213327100701.json

./stix2/test/v21/stix2_data/relationship/relationship--3a3ed0b2-0c38-441f-ac40-53b873e545d1:
20170531213327143973.json

./stix2/test/v21/stix2_data/relationship/relationship--592d0c31-e61f-495e-a60e-70d7be59a719:
20170531213327021562.json

./stix2/test/v21/stix2_data/relationship/relationship--70dc6b5c-c524-429e-a6ab-0dd40f0482c1:
20170531213327044387.json

./stix2/test/v21/stix2_data/relationship/relationship--8797579b-e3be-4209-a71b-255a4d08243d:
20170531213327051532.json

./stix2/test/v21/stix2_data/tool:
tool--03342581-f790-4f03-ba41-e82e67392e23
tool--242f3da3-4425-4d11-8f5c-b842886da966

./stix2/test/v21/stix2_data/tool/tool--03342581-f790-4f03-ba41-e82e67392e23:
20170531213231601148.json

./stix2/test/v21/stix2_data/tool/tool--242f3da3-4425-4d11-8f5c-b842886da966:
20170531213212684914.json

./stix2/v20:
__init__.py  base.py  bundle.py  common.py  observables.py  sdo.py  sro.py

./stix2/v21:
__init__.py  base.py  bundle.py  common.py  observables.py  sdo.py  sro.py

./stix2.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/oasis-open__cti-python-stix2__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/ESSS__pytest-regressions__0.0 && ls -l
total 36
-rw-rw-r--  1 root root 2746 Feb  4 07:35 CHANGELOG.rst
-rw-rw-r--  1 root root  542 Feb  4 07:35 HOWTORELEASE.rst
-rw-rw-r--  1 root root 1072 Feb  4 07:35 LICENSE
-rw-rw-r--  1 root root 2987 Feb  4 07:35 README.rst
drwxr-xr-x  2 root root 4096 Feb  4 07:35 doc
-rw-rw-r--  1 root root 1807 Feb  4 07:35 setup.py
drwxr-xr-x  4 root root 4096 Feb  4 07:35 src
drwxr-xr-x 10 root root 4096 Feb  4 07:35 tests
-rw-rw-r--  1 root root  942 Feb  4 07:35 tox.ini[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/ESSS__pytest-regressions__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/knodle__knodle__0.0 && ls -R
.:
LICENSE    knodle           knodle_logo.png   setup.py  tutorials
README.md  knodle.egg-info  requirements.txt  tests

./knodle:
__init__.py  evaluation  trainer         utils
data         model       transformation  version.py

./knodle/data:
__init__.py  labelling_fcts.py  tfidf.py
download.py  statistics.py      transformer.py

./knodle/evaluation:
__init__.py  majority.py  sklearn_utils.py  tacred_metrics.py

./knodle/model:
EarlyStopping  __init__.py  bidirectional_lstm_model.py  logistic_regression

./knodle/model/EarlyStopping:
__init__.py

./knodle/model/logistic_regression:
__init__.py                            logistic_regression_model.py
logisitc_regression_with_emb_layer.py

./knodle/trainer:
__init__.py  config.py            knn_denoising  trainer.py
baseline     crossweigh_weighing  snorkel        utils

./knodle/trainer/baseline:
__init__.py  no_denoising.py

./knodle/trainer/crossweigh_weighing:
__init__.py    crossweigh_denoising_config.py  crossweigh_weights_calculator.py
crossweigh.py  crossweigh_trainer_config.py    utils.py

./knodle/trainer/knn_denoising:
__init__.py  config.py  knn_denoising.py

./knodle/trainer/snorkel:
__init__.py  config.py  snorkel_trainer.py  utils.py

./knodle/trainer/utils:
__init__.py  denoise.py  utils.py

./knodle/transformation:
__init__.py  filter.py  labels.py  majority.py  torch_input.py

./knodle/utils:
__init__.py

./knodle.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt

./tests:
__init__.py  data  evaluation  trainer  transformation

./tests/data:
__init__.py  test_labelling_fcts.py

./tests/evaluation:
__init__.py  majority.py

./tests/trainer:
__init__.py  baseline  crossweigh  snorkel  utils

./tests/trainer/baseline:
__init__.py  test_baseline.py

./tests/trainer/crossweigh:
__init__.py  test_cw_labels_calculation.py

./tests/trainer/snorkel:
__init__.py  test_utils.py

./tests/trainer/utils:
__init__.py  test_denoise.py  test_utils.py

./tests/transformation:
__init__.py  test_filter.py  test_majority.py  torch_input.py

./tutorials:
EvaluationMultipleTrainer  conll_relation_extraction_dataset  prepare_spam_data
ImdbDataset                crossweigh_weighing_example        spouse
__init__.py                knn_conll
baseline                   knn_tfidf_similarity_example

./tutorials/EvaluationMultipleTrainer:
EvaluationTutorial.ipynb

./tutorials/ImdbDataset:
Prepare_IMDB_Data.ipynb  requirements.txt  utils.py

./tutorials/baseline:
baseline_training_example.py  bert

./tutorials/baseline/bert:
__init__.py  bert.ipynb  requirements.txt

./tutorials/conll_relation_extraction_dataset:
entity_pairs_aka_lfs       lfs_reconstruction.py  requirements.txt
jupyter_notebook_tutorial  patterns_aka_lfs       utils.py

./tutorials/conll_relation_extraction_dataset/entity_pairs_aka_lfs:
conll_data_preprocessor.py

./tutorials/conll_relation_extraction_dataset/jupyter_notebook_tutorial:
Prepare_RE_Data.ipynb

./tutorials/conll_relation_extraction_dataset/patterns_aka_lfs:
conll_data_preprocessor.py

./tutorials/crossweigh_weighing_example:
crossweigh_training_tutorial.py  requirements.txt  utils.py

./tutorials/knn_conll:
train_conll_knn.py

./tutorials/knn_tfidf_similarity_example:
'Sanity Checks.ipynb'   knn_sim_tutorial.py

./tutorials/prepare_spam_data:
01_spam_tutorial.ipynb  download_data.sh  requirements.txt
__init__.py             get_data.sh       utils.py

./tutorials/spouse:
README.md            download_data.sh  preprocessors.py
data_creation.ipynb  imgs              utils.py

./tutorials/spouse/imgs:
sentence.jpg[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/knodle__knodle__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/sdv-dev__RDT__0.0 && ls -l
total 168
-rw-rw-r-- 1 root root    56 Feb  3 18:10 AUTHORS.rst
-rw-rw-r-- 1 root root 22812 Feb  3 18:10 CONTRIBUTING.rst
-rw-rw-r-- 1 root root 16969 Feb  3 18:10 DEVELOPMENT.rst
-rw-rw-r-- 1 root root 47988 Feb  3 18:10 HISTORY.md
-rw-rw-r-- 1 root root  1714 Feb  3 18:10 INSTALL.md
-rw-rw-r-- 1 root root  4872 Feb  3 18:10 LICENSE
-rw-rw-r-- 1 root root   284 Feb  3 18:10 MANIFEST.in
-rw-rw-r-- 1 root root  6670 Feb  3 18:10 Makefile
-rw-rw-r-- 1 root root  7134 Feb  3 18:10 README.md
-rw-rw-r-- 1 root root  6499 Feb  3 18:10 RELEASE.md
drwxr-xr-x 4 root root  4096 Feb  3 18:10 rdt
drwxrwxr-x 2 root root  4096 Feb  3 18:11 rdt.egg-info
-rw-rw-r-- 1 root root  1557 Feb  3 18:10 setup.cfg
-rw-rw-r-- 1 root root  4142 Feb  3 18:10 setup.py
-rw-rw-r-- 1 root root  3553 Feb  3 18:10 tasks.py
drwxr-xr-x 6 root root  4096 Feb  3 18:10 tests
-rw-rw-r-- 1 root root   488 Feb  3 18:10 tox.ini[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/sdv-dev__RDT__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/microsoft__electionguard-python__0.0 && find . -type f -name "*.py" ! -path "*/tests/*"
./src/electionguard/auxiliary.py
./src/electionguard/types.py
./src/electionguard/decrypt_with_secrets.py
./src/electionguard/encrypt.py
./src/electionguard/tally.py
./src/electionguard/ballot_validator.py
./src/electionguard/logs.py
./src/electionguard/decryption_share.py
./src/electionguard/decryption_mediator.py
./src/electionguard/decryption.py
./src/electionguard/tracker.py
./src/electionguard/__init__.py
./src/electionguard/scheduler.py
./src/electionguard/proof.py
./src/electionguard/election_builder.py
./src/electionguard/ballot_store.py
./src/electionguard/dlog.py
./src/electionguard/ballot_box.py
./src/electionguard/publish.py
./src/electionguard/election.py
./src/electionguard/rsa.py
./src/electionguard/utils.py
./src/electionguard/group.py
./src/electionguard/singleton.py
./src/electionguard/hash.py
./src/electionguard/guardian.py
./src/electionguard/elgamal.py
./src/electionguard/ballot.py
./src/electionguard/serializable.py
./src/electionguard/election_polynomial.py
./src/electionguard/nonces.py
./src/electionguard/words.py
./src/electionguard/election_object_base.py
./src/electionguard/chaum_pedersen.py
./src/electionguard/key_ceremony.py
./src/electionguard/data_store.py
./src/electionguard/decrypt_with_shares.py
./src/electionguard/key_ceremony_mediator.py
./src/electionguard/schnorr.py
./src/electionguardtest/tally.py
./src/electionguardtest/ballot_factory.py
./src/electionguardtest/election_factory.py
./src/electionguardtest/sample_generator.py
./src/electionguardtest/__init__.py
./src/electionguardtest/election.py
./src/electionguardtest/group.py
./src/electionguardtest/elgamal.py
./bench/bench_chaum_pedersen.py
./setup.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/microsoft__electionguard-python__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
ls -l /workspace/pints-team__pints__0.0
total 388
-rw-rw-r-- 1 root root   4584 Feb  4 22:46 CHANGELOG.md
-rw-rw-r-- 1 root root    682 Feb  4 22:46 CITATION
-rw-rw-r-- 1 root root  23530 Feb  4 22:46 CONTRIBUTING.md
-rw-rw-r-- 1 root root   1702 Feb  4 22:46 LICENSE.md
-rw-rw-r-- 1 root root     22 Feb  4 22:46 MANIFEST.in
-rw-rw-r-- 1 root root   5206 Feb  4 22:46 README.md
drwxr-xr-x 3 root root   4096 Feb  4 22:46 docs
-rw-rw-r-- 1 root root 291907 Feb  4 22:46 example.svg
drwxr-xr-x 8 root root   4096 Feb  4 22:46 examples
drwxr-xr-x 2 root root   4096 Feb  4 22:46 papers
drwxr-xr-x 9 root root   4096 Feb  4 22:46 pints
drwxrwxr-x 2 root root   4096 Feb  4 22:49 pints.egg-info
-rwxrwxr-x 1 root root     14 Feb  4 22:46 postBuild
-rwxrwxr-x 1 root root  18375 Feb  4 22:46 run-tests.py
-rw-rw-r-- 1 root root   2250 Feb  4 22:46 setup.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/pints-team__pints__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/DARMA-tasking__LB-analysis-framework__0.0 && find . -type f
./data/ccm_example/data.1.json
./data/ccm_example/data.0.json
./data/ccm_example/ccm_example.yaml
./data/challenging_toy_thousands_tasks/toy.128.json
./data/challenging_toy_thousands_tasks/toy.110.json
./data/challenging_toy_thousands_tasks/toy.67.json
./data/challenging_toy_thousands_tasks/toy.163.json
./data/challenging_toy_thousands_tasks/toy.175.json
./data/challenging_toy_thousands_tasks/toy.0.json
./data/challenging_toy_thousands_tasks/toy.3.json
./data/challenging_toy_thousands_tasks/toy.22.json
./data/challenging_toy_thousands_tasks/toy.95.json
./data/challenging_toy_thousands_tasks/toy.177.json
./data/challenging_toy_thousands_tasks/toy.113.json
./data/challenging_toy_thousands_tasks/toy.94.json
./data/challenging_toy_thousands_tasks/toy.12.json
./data/challenging_toy_thousands_tasks/toy.208.json
./data/challenging_toy_thousands_tasks/toy.123.json
./data/challenging_toy_thousands_tasks/toy.5.json
./data/challenging_toy_thousands_tasks/toy.127.json
./data/challenging_toy_thousands_tasks/toy.196.json
./data/challenging_toy_thousands_tasks/toy.179.json
./data/challenging_toy_thousands_tasks/toy.59.json
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./data/challenging_toy_thousands_tasks/toy.245.json
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./data/challenging_toy_thousands_tasks/toy.224.json
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./data/challenging_toy_thousands_tasks/toy.200.json
./data/challenging_toy_thousands_tasks/toy.244.json
./data/challenging_toy_thousands_tasks/toy.156.json
./data/challenging_toy_thousands_tasks/toy.120.json
./data/challenging_toy_thousands_tasks/toy.193.json
./data/challenging_toy_thousands_tasks/toy.152.json
./data/challenging_toy_thousands_tasks/toy.83.json
./data/challenging_toy_thousands_tasks/toy.154.json
./data/challenging_toy_thousands_tasks/toy.157.json
./data/challenging_toy_thousands_tasks/toy.189.json
./data/challenging_toy_thousands_tasks/toy.137.json
./data/challenging_toy_thousands_tasks/toy.169.json
./data/challenging_toy_thousands_tasks/toy.103.json
./data/challenging_toy_thousands_tasks/toy.31.json
./data/challenging_toy_thousands_tasks/toy.173.json
./data/challenging_toy_thousands_tasks/toy.116.json
./data/challenging_toy_thousands_tasks/toy.153.json
./data/challenging_toy_thousands_tasks/toy.105.json
./data/challenging_toy_thousands_tasks/toy.77.json
./data/challenging_toy_thousands_tasks/toy.229.json
./data/challenging_toy_thousands_tasks/toy.71.json
./data/challenging_toy_thousands_tasks/toy.33.json
./data/nolb-8color-16nodes-every50phases/stats.2.json
./data/nolb-8color-16nodes-every50phases/stats.11.json
./data/nolb-8color-16nodes-every50phases/stats.30.json
./data/nolb-8color-16nodes-every50phases/stats.10.json
./data/nolb-8color-16nodes-every50phases/stats.3.json
./data/nolb-8color-16nodes-every50phases/stats.27.json
./data/nolb-8color-16nodes-every50phases/stats.16.json
./data/nolb-8color-16nodes-every50phases/stats.29.json
./data/nolb-8color-16nodes-every50phases/stats.20.json
./data/nolb-8color-16nodes-every50phases/stats.8.json
./data/nolb-8color-16nodes-every50phases/stats.5.json
./data/nolb-8color-16nodes-every50phases/stats.17.json
./data/nolb-8color-16nodes-every50phases/stats.21.json
./data/nolb-8color-16nodes-every50phases/stats.1.json
./data/nolb-8color-16nodes-every50phases/stats.7.json
./data/nolb-8color-16nodes-every50phases/stats.6.json
./data/nolb-8color-16nodes-every50phases/stats.15.json
./data/nolb-8color-16nodes-every50phases/stats.26.json
./data/nolb-8color-16nodes-every50phases/stats.28.json
./data/nolb-8color-16nodes-every50phases/stats.23.json
./data/nolb-8color-16nodes-every50phases/stats.22.json
./data/nolb-8color-16nodes-every50phases/stats.19.json
./data/nolb-8color-16nodes-every50phases/stats.0.json
./data/nolb-8color-16nodes-every50phases/stats.31.json
./data/nolb-8color-16nodes-eve
[... Observation truncated due to length ...]
unch.json
./DESCRIPTION.rst
./lbaf.deps.Dockerfile
./src/lbaf.egg-info/SOURCES.txt
./src/lbaf.egg-info/not-zip-safe
./src/lbaf.egg-info/entry_points.txt
./src/lbaf.egg-info/requires.txt
./src/lbaf.egg-info/dependency_links.txt
./src/lbaf.egg-info/top_level.txt
./src/lbaf.egg-info/PKG-INFO
./src/lbaf/Applications/__init__.py
./src/lbaf/Applications/LBAF_app.py
./src/lbaf/IO/lbsConfigurationValidator.py
./src/lbaf/IO/__init__.py
./src/lbaf/IO/lbsVTDataWriter.py
./src/lbaf/IO/lbsConfigurationUpgrader.py
./src/lbaf/IO/lbsVTDataReader.py
./src/lbaf/IO/lbsStatistics.py
./src/lbaf/__init__.py
./src/lbaf/__main__.py
./src/lbaf/Utils/lbsJSONDataFilesMaker.py
./src/lbaf/Utils/lbsColors.py
./src/lbaf/Utils/lbsWeb.py
./src/lbaf/Utils/lbsVTDataExtractor.py
./src/lbaf/Utils/__init__.py
./src/lbaf/Utils/lbsJSONDataFilesValidatorLoader.py
./src/lbaf/Utils/lbsArgumentParser.py
./src/lbaf/Utils/lbsDataStatFilesUpdater.py
./src/lbaf/Utils/lbsLogging.py
./src/lbaf/Utils/lbsPath.py
./src/lbaf/Utils/lbsCsv2JsonDataConverter.py
./src/lbaf/Execution/lbsAlgorithmBase.py
./src/lbaf/Execution/lbsPhaseSpecification.py
./src/lbaf/Execution/lbsPhaseStepperAlgorithm.py
./src/lbaf/Execution/lbsInformAndTransferAlgorithm.py
./src/lbaf/Execution/lbsTransferStrategyBase.py
./src/lbaf/Execution/__init__.py
./src/lbaf/Execution/lbsRecursiveTransferStrategy.py
./src/lbaf/Execution/lbsCentralizedPrefixOptimizerAlgorithm.py
./src/lbaf/Execution/lbsTemperedCriterion.py
./src/lbaf/Execution/lbsClusteringTransferStrategy.py
./src/lbaf/Execution/lbsStrictLocalizingCriterion.py
./src/lbaf/Execution/lbsRuntime.py
./src/lbaf/Execution/lbsPrescribedPermutationAlgorithm.py
./src/lbaf/Execution/lbsBruteForceAlgorithm.py
./src/lbaf/Execution/lbsCriterionBase.py
./src/lbaf/Model/lbsObject.py
./src/lbaf/Model/lbsPhase.py
./src/lbaf/Model/lbsAffineCombinationWorkModel.py
./src/lbaf/Model/lbsWorkModelBase.py
./src/lbaf/Model/__init__.py
./src/lbaf/Model/lbsBlock.py
./src/lbaf/Model/lbsMessage.py
./src/lbaf/Model/lbsLoadOnlyWorkModel.py
./src/lbaf/Model/lbsRank.py
./src/lbaf/Model/lbsObjectCommunicator.py
./README.md
./lbaf.Dockerfile
./config/challenging-toy-hundreds-tasks.yaml
./config/test-vt-tv.yaml
./config/every20phases.yaml
./config/ccm-example.yaml
./config/user-defined-memory-toy-problem.yaml
./config/permute.yaml
./config/step.yaml
./config/conf.yaml
./config/challenging-toy-fewer-tasks.yaml
./config/synthetic-blocks.yaml
./config/global.yaml
./LICENSE
./pyproject.toml
./VERSION
./tests/__init__.py
./tests/unit/data/JSON_data_file_validator_stats/vt_lb_statistics_001.json
./tests/unit/data/JSON_data_file_validator_stats/vt_lb_statistics_wrong.json
./tests/unit/data/JSON_data_file_validator_stats/vt_lb_statistics_003.json
./tests/unit/data/JSON_data_file_validator_stats/vt_lb_statistics_no_schema_type.json
./tests/unit/data/JSON_data_file_validator_stats/vt_lb_statistics_004.json
./tests/unit/data/JSON_data_file_validator_stats/vt_lb_statistics_002.json
./tests/unit/data/JSON_data_file_validator_comm_links/data.1.json
./tests/unit/data/JSON_data_file_validator_comm_links/data.2.json
./tests/unit/data/JSON_data_file_validator_comm_links/data.0.json
./tests/unit/data/VTDataExtractor/compressed_data_to_extract/data.1.json
./tests/unit/data/VTDataExtractor/compressed_data_to_extract/data.3.json
./tests/unit/data/VTDataExtractor/compressed_data_to_extract/data.2.json
./tests/unit/data/VTDataExtractor/compressed_data_to_extract/data.0.json
./tests/unit/data/VTDataExtractor/empty_input_dir/empty
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_007/data.1.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_007/data.3.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_007/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_007/data.0.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_001/data.1.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_001/data.3.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_001/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_001/data.0.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_003/data.1.json
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./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_003/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_003/data.0.json
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./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_010/data.0.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_005/data.1.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_005/data.3.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_005/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_005/data.0.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_011/data.1.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_011/data.3.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_011/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_011/data.0.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_016/data.1.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_016/data.3.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_016/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_016/data.0.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_008/data.1.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_008/data.3.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_008/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_008/data.0.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_009/data.1.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_009/data.3.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_009/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_009/data.0.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_006/data.1.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_006/data.3.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_006/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_006/data.0.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_002/data.1.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_002/data.3.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_002/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_002/data.0.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_004/data.1.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_004/data.3.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_004/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_004/data.0.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_015/data.1.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_015/data.3.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_015/data.2.json
./tests/unit/data/VTDataExtractor/expected/test_vt_data_extractor_015/data.0.json
./tests/unit/data/VTDataExtractor/uncompressed_data_to_extract/data.1.json
./tests/unit/data/VTDataExtractor/uncompressed_data_to_extract/data.3.json
./tests/unit/data/VTDataExtractor/uncompressed_data_to_extract/data.2.json
./tests/unit/data/VTDataExtractor/uncompressed_data_to_extract/data.0.json
./tests/unit/data/VTDataExtractor/wrong_input_files/data.sm.json
./tests/unit/data/VTDataExtractor/wrong_input_files/data.other.json
./tests/unit/data/schema/invalid_schema_001.json
./tests/unit/data/schema/invalid_schema_002.json
./tests/unit/data/schema/valid_schema_uncompressed_001.json
./tests/unit/data/schema/valid_schema_001.json
./tests/unit/data/vt_lb_test_data/data.1.json
./tests/unit/data/vt_lb_test_data/data.3.json
./tests/unit/data/vt_lb_test_data/data.2.json
./tests/unit/data/vt_lb_test_data/data.0.json
./tests/unit/data/JSON_data_file_validator_wrong/data.0.json
./tests/unit/data/synthetic_lb_data/data.1.json
./tests/unit/data/synthetic_lb_data/data.3.json
./tests/unit/data/synthetic_lb_data/README.md
./tests/unit/data/synthetic_lb_data/data.2.json
./tests/unit/data/synthetic_lb_data/data.0.json
./tests/unit/data/synthetic_lb_data_compressed/data.1.json
./tests/unit/data/synthetic_lb_data_compressed/data.3.json
./tests/unit/data/synthetic_lb_data_compressed/data.2.json
./tests/unit/data/synthetic_lb_data_compressed/data.0.json
./tests/unit/data/JSON_data_file_validator/data.1.json
./tests/unit/data/JSON_data_file_validator/data.3.json
./tests/unit/data/JSON_data_file_validator/data.2.json
./tests/unit/data/JSON_data_file_validator/data.0.json
./tests/unit/data/user-defined-memory-toy-problem/toy_mem.2.json
./tests/unit/data/user-defined-memory-toy-problem/toy_mem.0.json
./tests/unit/data/user-defined-memory-toy-problem/toy_mem.3.json
./tests/unit/data/user-defined-memory-toy-problem/toy_mem.1.json
./tests/unit/data/JSON_data_file_validator_compressed/data.1.json
./tests/unit/data/JSON_data_file_validator_compressed/data.3.json
./tests/unit/data/JSON_data_file_validator_compressed/data.2.json
./tests/unit/data/JSON_data_file_validator_compressed/data.0.json
./tests/unit/data/synthetic_lb_data_wrong_schema/schema_error_3.txt
./tests/unit/data/synthetic_lb_data_wrong_schema/schema_error_1.txt
./tests/unit/data/synthetic_lb_data_wrong_schema/data.1.json
./tests/unit/data/synthetic_lb_data_wrong_schema/data.3.json
./tests/unit/data/synthetic_lb_data_wrong_schema/schema_error_2.txt
./tests/unit/data/synthetic_lb_data_wrong_schema/data.2.json
./tests/unit/data/synthetic_lb_data_wrong_schema/schema_error_0.txt
./tests/unit/data/synthetic_lb_data_wrong_schema/data.0.json
./tests/unit/Applications/__init__.py
./tests/unit/Applications/test_lbaf_app.py
./tests/unit/IO/__init__.py
./tests/unit/IO/test_lbs_vt_data_reader.py
./tests/unit/IO/test_vt_writer.py
./tests/unit/IO/test_lbs_statistics.py
./tests/unit/IO/test_configuration_validator.py
./tests/unit/__init__.py
./tests/unit/Utils/test_vt_data_extractor.py
./tests/unit/Utils/__init__.py
./tests/unit/Utils/test_json_data_files_maker.py
./tests/unit/Execution/test_lbs_recursive_transfer_strategy.py
./tests/unit/Execution/test_lbs_inform_and_transfer_algorithm.py
./tests/unit/Execution/test_lbs_runtime.py
./tests/unit/Execution/__init__.py
./tests/unit/Execution/test_lbs_centralized_prefix_optimizer_algorithm.py
./tests/unit/Execution/test_lbs_brute_force_algorithm.py
./tests/unit/Execution/test_lbs_clustering_transfer_strategy.py
./tests/unit/Execution/test_lbs_transfer_strategy_base.py
./tests/unit/config/conf_correct_from_samplers_no_ll.yml
./tests/unit/config/conf_wrong_from_samplers_load_sampler_003.yml
./tests/unit/config/conf_correct_phase_ids_str_001.yml
./tests/unit/config/conf_wrong_clustering_set_tol_type.yml
./tests/unit/config/conf_wrong_work_model_missing.yml
./tests/unit/config/conf_wrong_max_subclusters_type.yml
./tests/unit/config/conf_wrong_no_data_and_sampling.yml
./tests/unit/config/conf_correct_brute_force.yml
./tests/unit/config/conf_wrong_clustering_set_tol_mag.yml
./tests/unit/config/conf_wrong_missing_from_data_param.yml
./tests/unit/config/conf_vt_writer_stepper_test.yml
./tests/unit/config/conf_correct_clustering_set_tol.yml
./tests/unit/config/conf_wrong_algorithm_invalid_001.yml
./tests/unit/config/conf_wrong_subclustering_threshold.yml
./tests/unit/config/conf_correct_clustering_target_imb.yml
./tests/unit/config/conf_correct_003.yml
./tests/unit/config/conf_wrong_data_and_sampling.yml
./tests/unit/config/conf_wrong_from_samplers_load_sampler_005.yml
./tests/unit/config/conf_vt_writer_communications_test.yaml
./tests/unit/config/conf_wrong_separate_subclustering.yml
./tests/unit/config/conf_wrong_max_subclusters_mag.yml
./tests/unit/config/conf_wrong_work_model_parameters_type.yml
./tests/unit/config/conf_wrong_from_samplers_load_sampler_004.yml
./tests/unit/config/user-defined-memory-toy-problem.yaml
./tests/unit/config/conf_correct_002.yml
./tests/unit/config/conf_wrong_algorithm_invalid_002.yml
./tests/unit/config/conf_wrong_work_model_parameters_missing.yml
./tests/unit/config/conf_correct_from_data_min_config.yml
./tests/unit/config/conf_wrong_from_samplers_load_sampler_002.yml
./tests/unit/config/conf_wrong_visualization.yml
./tests/unit/config/conf_wrong_work_model_name.yml
./tests/unit/config/conf_correct_subclustering_filters.yml
./tests/unit/config/conf_wrong_phase_ids_str_001.yml
./tests/unit/config/phases/phase_spec_02_wrong.yaml
./tests/unit/config/phases/phase_spec_01_wrong.yaml
./tests/unit/config/phases/phase_spec_05_valid.yaml
./tests/unit/config/phases/phase_spec_03_valid.yaml
./tests/unit/config/phases/phase_spec_04_valid.yaml
./tests/unit/config/conf_correct_001.yml
./tests/unit/config/conf_wrong_subclustering_minimum_improvement.yml
./tests/unit/config/conf_correct_clustering.yml
./tests/unit/config/conf_wrong_from_data_phase_name.yml
./tests/unit/config/conf_wrong_from_data_phase_type.yml
./tests/unit/config/conf_wrong_from_samplers_load_sampler_001.yml
./tests/unit/imported/__init__.py
./tests/unit/imported/test_schema_validator.py
./tests/unit/imported/test_JSON_data_files_validator.py
./tests/unit/Model/test_lbs_rank.py
./tests/unit/Model/test_lbs_message.py
./tests/unit/Model/__init__.py
./tests/unit/Model/test_lbs_object.py
./tests/unit/Model/test_lbs_block.py
./tests/unit/Model/test_lbs_phase.py
./tests/unit/Model/test_lbs_work_models.py
./tests/unit/Model/test_lbs_object_communicator.py
./tests/acceptance/__init__.py
./tests/acceptance/test_synthetic_blocks.py
./tests/acceptance/test_stepper.py
./tests/acceptance/test_acceptance.py
./tests/acceptance/config/synthetic-acceptance.yaml
./tests/acceptance/config/stepper.yaml
./tests/acceptance/test_permutations.py
./.pylintrc
./doc/SAND2019-5139.pdf
./doc/Reference/DistributedDynamicLoadBalancer.pdf
./doc/Reference/hpdc12stealing.pdf
./doc/Reference/Fano-1947.pdf[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/DARMA-tasking__LB-analysis-framework__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
find /workspace/pints-team__pints__0.0 -type f -name "*.py" | grep -v "test" | xargs wc -l
   177 /workspace/pints-team__pints__0.0/docs/source/conf.py
    88 /workspace/pints-team__pints__0.0/setup.py
   565 /workspace/pints-team__pints__0.0/pints/_evaluation.py
     8 /workspace/pints-team__pints__0.0/pints/interfaces/__init__.py
   154 /workspace/pints-team__pints__0.0/pints/interfaces/stan/_stan.py
     9 /workspace/pints-team__pints__0.0/pints/interfaces/stan/__init__.py
   363 /workspace/pints-team__pints__0.0/pints/_core.py
  1414 /workspace/pints-team__pints__0.0/pints/_log_priors.py
   669 /workspace/pints-team__pints__0.0/pints/residuals_diagnostics.py
   107 /workspace/pints-team__pints__0.0/pints/_nested/_rejection.py
   790 /workspace/pints-team__pints__0.0/pints/_nested/__init__.py
   364 /workspace/pints-team__pints__0.0/pints/_nested/_ellipsoid.py
   288 /workspace/pints-team__pints__0.0/pints/__init__.py
    91 /workspace/pints-team__pints__0.0/pints/_mcmc/_rao_blackwell_ac.py
   218 /workspace/pints-team__pints__0.0/pints/_mcmc/_summary.py
    76 /workspace/pints-team__pints__0.0/pints/_mcmc/_haario_ac.py
   696 /workspace/pints-team__pints__0.0/pints/_mcmc/_slice_stepout.py
   460 /workspace/pints-team__pints__0.0/pints/_mcmc/_dream.py
  1157 /workspace/pints-team__pints__0.0/pints/_mcmc/__init__.py
   221 /workspace/pints-team__pints__0.0/pints/_mcmc/_emcee_hammer.py
   263 /workspace/pints-team__pints__0.0/pints/_mcmc/_slice_rank_shrinking.py
   365 /workspace/pints-team__pints__0.0/pints/_mcmc/_population.py
    93 /workspace/pints-team__pints__0.0/pints/_mcmc/_haario_bardenet_ac.py
   832 /workspace/pints-team__pints__0.0/pints/_mcmc/_nuts.py
   304 /workspace/pints-team__pints__0.0/pints/_mcmc/_adaptive_covariance.py
   299 /workspace/pints-team__pints__0.0/pints/_mcmc/_mala.py
   570 /workspace/pints-team__pints__0.0/pints/_mcmc/_relativistic.py
   587 /workspace/pints-team__pints__0.0/pints/_mcmc/_slice_doubling.py
   281 /workspace/pints-team__pints__0.0/pints/_mcmc/_dual_averaging.py
   185 /workspace/pints-team__pints__0.0/pints/_mcmc/_metropolis.py
   395 /workspace/pints-team__pints__0.0/pints/_mcmc/_hamiltonian.py
   331 /workspace/pints-team__pints__0.0/pints/_mcmc/_differential_evolution.py
   547 /workspace/pints-team__pints__0.0/pints/_mcmc/_monomial_gamma_hamiltonian.py
   215 /workspace/pints-team__pints__0.0/pints/_mcmc/_dram_ac.py
   104 /workspace/pints-team__pints__0.0/pints/io.py
  1219 /workspace/pints-team__pints__0.0/pints/_log_likelihoods.py
   492 /workspace/pints-team__pints__0.0/pints/_log_pdfs.py
   179 /workspace/pints-team__pints__0.0/pints/_boundaries.py
   142 /workspace/pints-team__pints__0.0/pints/toy/_neals_funnel.py
   112 /workspace/pints-team__pints__0.0/pints/toy/_goodwin_oscillator_model.py
   153 /workspace/pints-team__pints__0.0/pints/toy/_cone.py
   125 /workspace/pints-team__pints__0.0/pints/toy/_fitzhugh_nagumo_model.py
   125 /workspace/pints-team__pints__0.0/pints/toy/_rosenbrock.py
    34 /workspace/pints-team__pints__0.0/pints/toy/__init__.py
   111 /workspace/pints-team__pints__0.0/pints/toy/_constant_model.py
    47 /workspace/pints-team__pints__0.0/pints/toy/_parabola.py
   128 /workspace/pints-team__pints__0.0/pints/toy/_german_credit.py
   155 /workspace/pints-team__pints__0.0/pints/toy/_sir_model.py
   164 /workspace/pints-team__pints__0.0/pints/toy/_simple_egg_box.py
   112 /workspace/pints-team__pints__0.0/pints/toy/_sho_model.py
   121 /workspace/pints-team__pints__0.0/pints/toy/_repressilator_model.py
   153 /workspace/pints-team__pints__0.0/pints/toy/_high_dimensional_gaussian.py
   244 /workspace/pints-team__pints__0.0/pints/toy/_toy_classes.py
    96 /workspace/pints-team__pints__0.0/pints/toy/_logistic_model.py
   192 /workspace/pints-team__pints__0.0/pints/toy/_annulus.py
   160 /workspace/pints-team__pints__0.0/pints/toy/_german_credit_hierarchical.py
   212 /workspace/pints-team__pints__0.0/pints/toy/_multimodal_gaussian.py
   241 /workspace/pints-team__pints__0.0/pints/toy/_hh_ik_model.py
   251 /workspace/pints-team__pints__0.0/pints/toy/_beeler_reuter_model.py
   128 /workspace/pints-team__pints__0.0/pints/toy/_gaussian.py
   183 /workspace/pints-team__pints__0.0/pints/toy/_hes1_michaelis_menten.py
   164 /workspace/pints-team__pints__0.0/pints/toy/_eight_schools.py
    54 /workspace/pints-team__pints__0.0/pints/toy/stochastic/_schlogl_model.py
   176 /workspace/pints-team__pints__0.0/pints/toy/stochastic/_markov_jump_model.py
    13 /workspace/pints-team__pints__0.0/pints/toy/stochastic/__init__.py
    47 /workspace/pints-team__pints__0.0/pints/toy/stochastic/_michaelis_menten_model.py
    85 /workspace/pints-team__pints__0.0/pints/toy/stochastic/_degradation_model.py
    99 /workspace/pints-team__pints__0.0/pints/toy/stochastic/_logistic_model.py
    49 /workspace/pints-team__pints__0.0/pints/toy/stochastic/_production_degradation_model.py
   172 /workspace/pints-team__pints__0.0/pints/toy/_twisted_gaussian_banana.py
   145 /workspace/pints-team__pints__0.0/pints/toy/_lotka_volterra_model.py
   371 /workspace/pints-team__pints__0.0/pints/_error_measures.py
   364 /workspace/pints-team__pints__0.0/pints/_optimisers/_cmaes_bare.py
   218 /workspace/pints-team__pints__0.0/pints/_optimisers/_cmaes.py
   186 /workspace/pints-team__pints__0.0/pints/_optimisers/_xnes.py
  1254 /workspace/pints-team__pints__0.0/pints/_optimisers/__init__.py
   330 /workspace/pints-team__pints__0.0/pints/_optimisers/_nelder_mead.py
   174 /workspace/pints-team__pints__0.0/pints/_optimisers/_snes.py
   129 /workspace/pints-team__pints__0.0/pints/_optimisers/_gradient_descent.py
   277 /workspace/pints-team__pints__0.0/pints/_optimisers/_pso.py
   308 /workspace/pints-team__pints__0.0/pints/_optimisers/_irpropmin.py
   186 /workspace/pints-team__pints__0.0/pints/_optimisers/_adam.py
   363 /workspace/pints-team__pints__0.0/pints/_abc/__init__.py
   234 /workspace/pints-team__pints__0.0/pints/_abc/_abc_smc.py
    90 /workspace/pints-team__pints__0.0/pints/_abc/_abc_rejection.py
   320 /workspace/pints-team__pints__0.0/pints/noise.py
   248 /workspace/pints-team__pints__0.0/pints/_diagnostics.py
   133 /workspace/pints-team__pints__0.0/pints/plot/_trace.py
    82 /workspace/pints-team__pints__0.0/pints/plot/_function_between_points.py
    16 /workspace/pints-team__pints__0.0/pints/plot/__init__.py
   130 /workspace/pints-team__pints__0.0/pints/plot/_histogram.py
   333 /workspace/pints-team__pints__0.0/pints/plot/_surface.py
    65 /workspace/pints-team__pints__0.0/pints/plot/_autocorrelation.py
   147 /workspace/pints-team__pints__0.0/pints/plot/_series.py
    98 /workspace/pints-team__pints__0.0/pints/plot/_function.py
   248 /workspace/pints-team__pints__0.0/pints/plot/_pairwise.py
  1241 /workspace/pints-team__pints__0.0/pints/_transformation.py
   111 /workspace/pints-team__pints__0.0/pints/_util.py
   485 /workspace/pints-team__pints__0.0/pints/_logger.py
   120 /workspace/pints-team__pints__0.0/pints/_sample_initial_points.py
 27830 total[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/pints-team__pints__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/runpod__runpod-python__0.0 && find . -type f -name "*.py" | grep -v "test"
./runpod/_version.py
./runpod/user_agent.py
./runpod/__init__.py
./runpod/api/mutations/container_register_auth.py
./runpod/api/mutations/__init__.py
./runpod/api/mutations/templates.py
./runpod/api/mutations/endpoints.py
./runpod/api/mutations/pods.py
./runpod/api/mutations/user.py
./runpod/api/__init__.py
./runpod/api/ctl_commands.py
./runpod/api/graphql.py
./runpod/api/queries/__init__.py
./runpod/api/queries/endpoints.py
./runpod/api/queries/gpus.py
./runpod/api/queries/pods.py
./runpod/api/queries/user.py
./runpod/tracer.py
./runpod/version.py
./runpod/error.py
./runpod/serverless/__init__.py
./runpod/serverless/worker.py
./runpod/serverless/modules/rp_fastapi.py
./runpod/serverless/modules/worker_state.py
./runpod/serverless/modules/rp_logger.py
./runpod/serverless/modules/rp_progress.py
./runpod/serverless/modules/rp_ping.py
./runpod/serverless/modules/rp_local.py
./runpod/serverless/modules/rp_scale.py
./runpod/serverless/modules/__init__.py
./runpod/serverless/modules/rp_job.py
./runpod/serverless/modules/rp_handler.py
./runpod/serverless/modules/rp_http.py
./runpod/serverless/modules/rp_tips.py
./runpod/serverless/utils/rp_cleanup.py
./runpod/serverless/utils/__init__.py
./runpod/serverless/utils/rp_validator.py
./runpod/serverless/utils/rp_download.py
./runpod/serverless/utils/rp_cuda.py
./runpod/serverless/utils/rp_debugger.py
./runpod/serverless/utils/rp_upload.py
./runpod/serverless/core.py
./runpod/cli/groups/ssh/__init__.py
./runpod/cli/groups/ssh/commands.py
./runpod/cli/groups/ssh/functions.py
./runpod/cli/groups/project/__init__.py
./runpod/cli/groups/project/starter_templates/default/src/handler.py
./runpod/cli/groups/project/starter_templates/llama2/src/handler.py
./runpod/cli/groups/project/commands.py
./runpod/cli/groups/project/helpers.py
./runpod/cli/groups/project/functions.py
./runpod/cli/groups/__init__.py
./runpod/cli/groups/pod/__init__.py
./runpod/cli/groups/pod/commands.py
./runpod/cli/groups/exec/__init__.py
./runpod/cli/groups/exec/commands.py
./runpod/cli/groups/exec/helpers.py
./runpod/cli/groups/exec/functions.py
./runpod/cli/groups/config/__init__.py
./runpod/cli/groups/config/commands.py
./runpod/cli/groups/config/functions.py
./runpod/cli/__init__.py
./runpod/cli/utils/rp_sync.py
./runpod/cli/utils/rp_info.py
./runpod/cli/utils/ssh_cmd.py
./runpod/cli/utils/__init__.py
./runpod/cli/utils/rp_runpodignore.py
./runpod/cli/utils/rp_userspace.py
./runpod/cli/entry.py
./runpod/http_client.py
./runpod/endpoint/runner.py
./runpod/endpoint/asyncio/__init__.py
./runpod/endpoint/asyncio/asyncio_runner.py
./runpod/endpoint/__init__.py
./runpod/endpoint/helpers.py
./setup.py
./examples/endpoints/asyncio_job_request.py
./examples/endpoints/streaming.py
./examples/endpoints/run_sync.py
./examples/endpoints/health.py
./examples/endpoints/run.py
./examples/api/get_endpoints.py
./examples/api/create_template.py
./examples/api/create_container_registry_auth.py
./examples/api/create_endpoint.py
./examples/graphql_wrapper.py
./examples/serverless/simple_handler.py
./examples/serverless/concurrent_handler.py
./examples/serverless/logger.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/runpod__runpod-python__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/neurodsp-tools__neurodsp__0.0 && find . -name "sim_aperiodic.py"[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/neurodsp-tools__neurodsp__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/CSchoel__nolds__0.0 && ls -R
.:
CHANGELOG.md  MANIFEST.in  TODO.md  nolds           notes.txt
LICENSE.txt   README.rst   doc      nolds.egg-info  setup.py

./doc:
Makefile  make.bat  source

./doc/source:
conf.py  examples.rst  index.rst  nolds.rst  requirements.txt  tests.rst

./nolds:
__init__.py  datasets  datasets.py  examples.py  measures.py  test_measures.py

./nolds/datasets:
'^JKSE.csv'  '^NDX.csv'     lorenz.txt             qrandom.npy
'^N225.csv'   brown72.npy   lorenz_physionet.txt

./nolds.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/CSchoel__nolds__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
ls -la /workspace/weaviate__weaviate-cli__0.0
total 56
drwxr-xr-x 6 root root 4096 Feb  4 21:34 .
drwxrwxr-x 3 root root 4096 Feb  4 21:23 ..
drwxr-xr-x 5 root root 4096 Feb  4 21:34 .git
-rw-rw-r-- 1 root root  112 Feb  4 21:34 .gitignore
-rw-rw-r-- 1 root root 2161 Feb  4 21:34 .travis.yml
-rw-rw-r-- 1 root root 1508 Feb  4 21:34 LICENSE
-rw-rw-r-- 1 root root 2207 Feb  4 21:34 README.rst
-rw-rw-r-- 1 root root 3556 Feb  4 21:34 cli.py
-rw-rw-r-- 1 root root  756 Feb  4 21:34 publish.md
-rw-rw-r-- 1 root root   42 Feb  4 21:34 requirements.txt
drwxrwxr-x 5 root root 4096 Feb  4 21:34 semi
-rw-rw-r-- 1 root root 1005 Feb  4 21:34 setup.py
drwxr-xr-x 2 root root 4096 Feb  4 21:34 test
drwxrwxr-x 2 root root 4096 Feb  4 21:34 weaviate_cli.egg-info[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/weaviate__weaviate-cli__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/adtzlr__felupe__0.0 && ls -R
.:
CHANGELOG.md  LICENSE    docs            src    tox.ini
CITATION.cff  README.md  pyproject.toml  tests

./docs:
Makefile  examples      explanation.rst  howto      make.bat
_static   examples.rst  felupe           howto.rst  tutorial
conf.py   explanation   felupe.rst       index.rst  tutorial.rst

./docs/_static:
animation.ogv               logo.png        readme.png
engine-mount_air.vtk        logo.svg        readme_animation.mp4
engine-mount_animation.mp4  logo_dark.svg   readme_characteristic_curve.svg
engine-mount_metal.vtk      logo_light.svg  social_preview.svg
engine-mount_rubber.vtk     mesh.vtk

./docs/examples:
_beam.rst           enginemount.rst  numcont.rst          rubberspring.rst
_platewithhole.rst  images           plasticity.ipynb     shear.rst
beam.ipynb          inflation.ipynb  platewithhole.ipynb

./docs/examples/images:
balloon.png                platewithhole.svg
balloon.svg                platewithhole_mesh.png
beam.png                   platewithhole_mesh_felupe.png
beam_bodyforce.png         platewithhole_stress_continuous_alpha.png
bodyforce-load.png         platewithhole_stressplot.svg
bodyforce-unload.png       plot_force-displacement.png
engine-mount_Fx-ux.svg     rubber-spring.png
engine-mount_Fy-uy.svg     rubber-spring_curve-axial.svg
engine-mount_deformed.png  rubber-spring_curve-lateral.svg
engine-mount_mesh.png      rubber-spring_mesh.png
getting-started.svg        shear.svg
inflation.png              shear_deformed.png
lab.png                    shear_deformed_old.png
plasticity.png             shear_mesh.png
plasticity.svg             shear_plot.svg

./docs/explanation:
axi.rst  mixed.rst

./docs/felupe:
assembly.rst      dof.rst      images         quadrature.rst
basis.rst         element.rst  mechanics.rst  region.rst
constitution.rst  field.rst    mesh.rst       tools.rst

./docs/felupe/images:
boundary_axes.png     loadcase_bx.png        region-quad.png
boundary_center.png   loadcase_bx_free.png   region-tetra.png
boundary_left.png     loadcase_ps.png        region-triangle.png
boundary_surface.png  loadcase_shear.png     tetra-mini.png
boundary_symx.png     loadcase_ux.png        tetra.png
dof_partition.png     quad.png               tetra10.png
hexahedron.png        quad8.png              triangle-mini.png
hexahedron20.png      quad9.png              triangle.png
hexahedron27.png      region-hexahedron.png  triangle6.png

./docs/howto:
axi.rst              forms.rst    mixed.rst  solvers.rst
building_blocks.rst  images       rbe2.rst   umat.rst
composite.rst        meshgen.rst  solid.rst  umat_hyperelasticity.rst

./docs/howto/images:
circle.png           fidget_spinner.png                 region.svg
composite.png        fidget_spinner_boundary.png        runouts.png
cube-tetra-mode.png  fidget_spinner_boundary_faces.png  solid-boundary.png
cube-tetra.png       fill-between.png                   solid.png
cube.png             plate-with-hole.png                threefield_cube.png
cylinder.png         quad.png                           triangle.png
deformed_mesh.png    rectangle-triangle.png             undeformed_mesh.png

./docs/tutorial:
getting_started.rst  images  jobs.rst

./docs/tutorial/images:
jobs.png  readme.png

./src:
felupe  felupe.egg-info

./src/felupe:
__about__.py  _basis        dof      mechanics   region
__init__.py   _field        element  mesh        solve
_assembly     constitution  math     quadrature  tools

./src/felupe/_assembly:
__init__.py  _axi.py  _form.py  _integral.py  _weak.py

./src/felupe/_basis:
__init__.py  _basis.py

./src/felupe/_field:
__init__.py  _base.py       _fields.py   _planestrain.py
_axi.py      _container.py  _indices.py

./src/felupe/constitution:
__init__.py                    _models_linear_elasticity_large_strain.py
_kinematics.py                 _models_pseudo_elasticity.py
_mixed.py                      _user_materials.py
_models_hyperelasticity.py     _user_materials_hyperelastic.py
_models_hyperelasticity_ad.py  _user_materials_models.py
_models_linear_elasticity.py

./src/felupe/dof:
__init__.py  _boundary.py  _loadcase.py  _tools.py

./src/felupe/element:
__init__.py  _hexahedron.py  _line.py  _tetra.py
_base.py     _lagrange.py    _quad.py  _triangle.py

./src/felupe/math:
__init__.py  _field.py  _math.py  _spatial.py  _tensor.py

./src/felupe/mechanics:
__init__.py  _multipoint.py         _solidbody_incompressible.py
_curve.py    _pointload.py          _solidbody_pressure.py
_helpers.py  _solidbody.py          _step.py
_job.py      _solidbody_gravity.py

./src/felupe/mesh:
__init__.py    _discrete_geometry.py  _helpers.py              _read.py
_container.py  _dual.py               _line_rectangle_cube.py  _tools.py
_convert.py    _geometry.py           _mesh.py

./src/felupe/quadrature:
__init__.py  _base.py  _gausslegendre.py  _tetra.py  _triangle.py

./src/felupe/region:
__init__.py  _boundary.py  _region.py  _templates.py

./src/felupe/solve:
__init__.py  _solve.py

./src/felupe/tools:
__init__.py  _newton.py  _post.py     _save.py
_misc.py     _plot.py    _project.py  _solve.py

./src/felupe.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt

./tests:
__init__.py           test_constitution.py  test_mpc.py
mesh.bdf              test_dof.py           test_planestrain.py
mesh.png              test_element.py       test_plot.py
mesh.vtk              test_field.py         test_quadrature.py
mesh_no-cells.bdf     test_form.py          test_readme.py
rectangle.png         test_job.py           test_region.py
test_basis.py         test_math.py          test_solve.py
test_bilinearform.py  test_mechanics.py     test_tools.py
test_composite.py     test_mesh.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/adtzlr__felupe__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/panalysis__Google2Pandas__0.0 && ls -l
total 32
drwxrwxr-x 2 root root 4096 Feb  5 03:58 Google2Pandas.egg-info
-rw-rw-r-- 1 root root 1330 Feb  5 03:57 LICENSE.md
-rw-rw-r-- 1 root root   38 Feb  5 03:57 MANIFEST.in
-rw-rw-r-- 1 root root 4654 Feb  5 03:57 README.md
drwxr-xr-x 2 root root 4096 Feb  5 03:57 google2pandas
-rw-rw-r-- 1 root root   65 Feb  5 03:57 setup.cfg
-rw-rw-r-- 1 root root 1754 Feb  5 03:57 setup.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/panalysis__Google2Pandas__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/wookayin__expt__0.0 && ls -R
.:
LICENSE      README.md  expt           fixtures   setup.py
MANIFEST.in  examples   expt.egg-info  setup.cfg

./examples:
demo-figure.png  quick-tour.ipynb

./expt:
__init__.py  data.py         data_loader_test.py  path_util.py  plot_test.py
colors.py    data_loader.py  data_test.py         plot.py       util.py

./expt.egg-info:
PKG-INFO     dependency_links.txt  requires.txt
SOURCES.txt  not-zip-safe          top_level.txt

./fixtures:
sample_csv

./fixtures/sample_csv:
progress.csv[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/wookayin__expt__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/adtzlr__felupe__0.0 && find . -type f -name "*.py" -not -path "*/tests/*"
./docs/conf.py
./src/felupe/__init__.py
./src/felupe/math/__init__.py
./src/felupe/math/_spatial.py
./src/felupe/math/_tensor.py
./src/felupe/math/_math.py
./src/felupe/math/_field.py
./src/felupe/mechanics/_curve.py
./src/felupe/mechanics/__init__.py
./src/felupe/mechanics/_job.py
./src/felupe/mechanics/_solidbody_gravity.py
./src/felupe/mechanics/_pointload.py
./src/felupe/mechanics/_solidbody.py
./src/felupe/mechanics/_solidbody_pressure.py
./src/felupe/mechanics/_solidbody_incompressible.py
./src/felupe/mechanics/_step.py
./src/felupe/mechanics/_helpers.py
./src/felupe/mechanics/_multipoint.py
./src/felupe/constitution/_mixed.py
./src/felupe/constitution/_models_pseudo_elasticity.py
./src/felupe/constitution/__init__.py
./src/felupe/constitution/_user_materials.py
./src/felupe/constitution/_kinematics.py
./src/felupe/constitution/_models_hyperelasticity_ad.py
./src/felupe/constitution/_user_materials_hyperelastic.py
./src/felupe/constitution/_user_materials_models.py
./src/felupe/constitution/_models_hyperelasticity.py
./src/felupe/constitution/_models_linear_elasticity.py
./src/felupe/_field/_planestrain.py
./src/felupe/_field/_base.py
./src/felupe/_field/__init__.py
./src/felupe/_field/_container.py
./src/felupe/_field/_indices.py
./src/felupe/_field/_fields.py
./src/felupe/_field/_axi.py
./src/felupe/quadrature/_base.py
./src/felupe/quadrature/__init__.py
./src/felupe/quadrature/_tetra.py
./src/felupe/quadrature/_gausslegendre.py
./src/felupe/quadrature/_triangle.py
./src/felupe/mesh/_base.py
./src/felupe/mesh/__init__.py
./src/felupe/mesh/_container.py
./src/felupe/mesh/_read.py
./src/felupe/mesh/_convert.py
./src/felupe/mesh/_mesh.py
./src/felupe/mesh/_geometry.py
./src/felupe/mesh/_helpers.py
./src/felupe/mesh/_tools.py
./src/felupe/_assembly/_form.py
./src/felupe/_assembly/_base.py
./src/felupe/_assembly/_mixed.py
./src/felupe/_assembly/__init__.py
./src/felupe/_assembly/_axi.py
./src/felupe/__about__.py
./src/felupe/element/_base.py
./src/felupe/element/__init__.py
./src/felupe/element/_quad.py
./src/felupe/element/_tetra.py
./src/felupe/element/_hexahedron.py
./src/felupe/element/_line.py
./src/felupe/element/_lagrange.py
./src/felupe/element/_triangle.py
./src/felupe/_basis/_basis.py
./src/felupe/_basis/__init__.py
./src/felupe/dof/_boundary.py
./src/felupe/dof/_loadcase.py
./src/felupe/dof/__init__.py
./src/felupe/dof/_tools.py
./src/felupe/solve/_solve.py
./src/felupe/solve/__init__.py
./src/felupe/region/_templates.py
./src/felupe/region/_boundary.py
./src/felupe/region/__init__.py
./src/felupe/region/_region.py
./src/felupe/tools/_solve.py
./src/felupe/tools/__init__.py
./src/felupe/tools/_post.py
./src/felupe/tools/_project.py
./src/felupe/tools/_newton.py
./src/felupe/tools/_save.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/adtzlr__felupe__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/flatironinstitute__bayes-kit__0.0 && ls -R
.:
LICENSE-CODE  README.md  bayes_kit.egg-info  setup.cfg
LICENSE-DOC   bayes_kit  pyproject.toml      test

./bayes_kit:
__init__.py  ess.py  mala.py        model_types.py  smc.py
ensemble.py  hmc.py  metropolis.py  rhat.py

./bayes_kit.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt

./test:
__init__.py            test_ess.py   test_metropolis.py
models                 test_hmc.py   test_rhat.py
test_equivalencies.py  test_mala.py  test_tempered_smc.py

./test/models:
__init__.py  binomial.py  skew_normal.py  std_normal.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/flatironinstitute__bayes-kit__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/semuconsulting__pyspartn__0.0 && ls -R
.:
CITATION.bib        MANIFEST.in       cryptography_installation  src
CODE_OF_CONDUCT.md  README.md         docs                       tests
CONTRIBUTING.md     RELEASE_NOTES.md  examples
LICENSE             SECURITY.md       pyproject.toml

./cryptography_installation:
 README.md  'RPI3 32'  'RPI4 32'

'./cryptography_installation/RPI3 32':
cryptography-42.0.5-cp39-cp39-linux_armv7l.whl  sha256.txt

'./cryptography_installation/RPI4 32':
cryptography-42.0.5-cp312-cp312-linux_armv7l.whl  sha256.txt

./docs:
Makefile  conf.py  index.rst  make.bat  modules.rst  pyspartn.rst

./examples:
benchmark.py         rxmpmp_extract_spartn.py  spartn_parser.py
d9s_rxmpmp_data.ubx  spartnGAD.csv             spartnmqtt.log
d9s_spartn_data.bin  spartn_decrypt.py         spartnntrip.log
gad_plot.py          spartn_mqtt_client.py
gad_plot_map.png     spartn_ntrip_client.py

./src:
pyspartn  pyspartn.egg-info

./src/pyspartn:
__init__.py    socket_stream.py  spartnreader.py      spartntypes_get.py
_version.py    spartnhelpers.py  spartntables.py
exceptions.py  spartnmessage.py  spartntypes_core.py

./src/pyspartn.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt

./tests:
__init__.py     spartnOCB.log           spartn_mqtt.log  test_stream.py
spartnGAD.log   spartn_badcrc.log       test_socket.py
spartnHPAC.log  spartn_badpreamble.log  test_static.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/semuconsulting__pyspartn__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/stan-dev__pystan__0.0 && find . -type f -name "*.py" -not -path "*/tests/*"
./stan/__init__.py
./stan/plugins.py
./stan/common.py
./stan/fit.py
./stan/model.py
./doc/conf.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/stan-dev__pystan__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
ls -R /workspace/GreenScheduler__cats__0.0
/workspace/GreenScheduler__cats__0.0:
CODE_OF_CONDUCT.md                     config.yml
LICENSE                                docs
README.md                              fixed_parameters.yaml
cats                                   pyproject.toml
cats.gif                               tests
climate_aware_task_scheduler.egg-info

/workspace/GreenScheduler__cats__0.0/cats:
CI_api_interface.py  __main__.py               configure.py
CI_api_query.py      carbonFootprint.py        forecast.py
__init__.py          check_clean_arguments.py  optimise_starttime.py

/workspace/GreenScheduler__cats__0.0/climate_aware_task_scheduler.egg-info:
PKG-INFO     dependency_links.txt  requires.txt
SOURCES.txt  entry_points.txt      top_level.txt

/workspace/GreenScheduler__cats__0.0/docs:
Makefile  README.md  docs-requirements.txt  make.bat  source

/workspace/GreenScheduler__cats__0.0/docs/source:
_static            conf.py           installation.rst  use-with-schedulers.rst
api-reference.rst  contributing.rst  introduction.rst
cli-reference.rst  index.rst         quickstart.rst

/workspace/GreenScheduler__cats__0.0/docs/source/_static:
cats_dalle_img.png  cats_dalle_img_200x200px_for_logo.png  favicon_io

/workspace/GreenScheduler__cats__0.0/docs/source/_static/favicon_io:
android-chrome-192x192.png  favicon-16x16.png  site.webmanifest
android-chrome-512x512.png  favicon-32x32.png
apple-touch-icon.png        favicon.ico

/workspace/GreenScheduler__cats__0.0/tests:
carbon_intensity_24h.csv  test_configure.py
test_api_query.py         test_windowed_forecast.py[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/GreenScheduler__cats__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/sktime__sktime__0.0 && find . -name "*.py" | grep -i "columnselect"[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/sktime__sktime__0.0 #
[Command finished with exit code 1]


Prompt:
EXECUTION RESULT of [execute_bash]:
ls -la /workspace/mirumee__ariadne__0.0
total 120
drwxr-xr-x 9 root root  4096 Feb  5 14:09 .
drwxrwxr-x 3 root root  4096 Feb  5 14:03 ..
-rw-rw-r-- 1 root root   159 Feb  5 14:09 .editorconfig
drwxr-xr-x 8 root root  4096 Feb  5 14:10 .git
drwxr-xr-x 4 root root  4096 Feb  5 14:09 .github
-rw-rw-r-- 1 root root  1290 Feb  5 14:09 .gitignore
-rw-rw-r-- 1 root root   304 Feb  5 14:09 .pylintrc
-rw-rw-r-- 1 root root 16841 Feb  5 14:09 CHANGELOG.md
-rw-rw-r-- 1 root root  3352 Feb  5 14:09 CODE_OF_CONDUCT.md
-rw-rw-r-- 1 root root  2167 Feb  5 14:09 CONTRIBUTING.md
-rw-rw-r-- 1 root root  1512 Feb  5 14:09 LICENSE
-rw-rw-r-- 1 root root  5155 Feb  5 14:09 README.md
drwxr-xr-x 6 root root  4096 Feb  5 14:09 ariadne
drwxr-xr-x 3 root root  4096 Feb  5 14:09 benchmark
-rw-rw-r-- 1 root root    91 Feb  5 14:09 codecov.yml
-rw-rw-r-- 1 root root 23795 Feb  5 14:09 generate_reference.py
-rw-rw-r-- 1 root root  2308 Feb  5 14:09 pyproject.toml
drwxr-xr-x 7 root root  4096 Feb  5 14:09 tests
drwxr-xr-x 5 root root  4096 Feb  5 14:03 tests_integrations
drwxr-xr-x 2 root root  4096 Feb  5 14:09 tests_mypy[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/mirumee__ariadne__0.0 #
[Command finished with exit code 0]


Prompt:
EXECUTION RESULT of [execute_bash]:
cd /workspace/photosynthesis-team__piq__0.0 && ls -R
.:
CONTRIBUTING.rst  codecov.yml   mkdocs.yml    requirements.txt
LICENSE           conda.recipe  mypy.ini      setup.py
README.rst        docs          piq           tests
_config.yml       examples      piq.egg-info  tox.ini

./conda.recipe:
conda_build_config.yaml  meta.yaml

./docs:
Makefile  make.bat  requirements.txt  source

./docs/source:
_static  contributing.rst  index.rst         modules.rst   usage_examples.rst
conf.py  functions.rst     installation.rst  overview.rst

./docs/source/_static:
benchmark.csv  piq_logo_main.png

./examples:
__init__.py  feature_metrics.py  image_metrics.py

./piq:
__init__.py         fid.py      haarpsi.py  ms_ssim.py     psnr.py   vif.py
base.py             fsim.py     isc.py      msid.py        srsim.py  vsi.py
brisque.py          functional  iw_ssim.py  perceptual.py  ssim.py
dss.py              gmsd.py     kid.py      pieapp.py      tv.py
feature_extractors  gs.py       mdsi.py     pr.py          utils

./piq/feature_extractors:
__init__.py  fid_inception.py

./piq/functional:
__init__.py  base.py  colour_conversion.py  filters.py  layers.py  resize.py

./piq/utils:
__init__.py  common.py

./piq.egg-info:
PKG-INFO  SOURCES.txt  dependency_links.txt  requires.txt  top_level.txt

./tests:
__init__.py           test_fid.py      test_kid.py         test_psnr.py
assets                test_fsim.py     test_mdsi.py        test_srsim.py
conftest.py           test_gmsd.py     test_ms_ssim.py     test_ssim.py
results_benchmark.py  test_gs.py       test_msid.py        test_tv.py
test_brisque.py       test_haarpsi.py  test_perceptual.py  test_utils.py
test_dss.py           test_is.py       test_pieapp.py      test_vif.py
test_examples.py      test_iw_ssim.py  test_pr.py          test_vsi.py

./tests/assets:
I01.BMP  goldhill.gif  goldhill_jpeg.gif  i01_01_5.bmp[Python Interpreter: /usr/bin/python]
root@openhands-workspace:/workspace/photosynthesis-team__piq__0.0 #
[Command finished with exit code 0]