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| import os |
| import sys |
| from collections import OrderedDict |
|
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| import numpy as np |
| import torch |
|
|
| import monai |
|
|
| try: |
| import ignite |
|
|
| ignite_version = ignite.__version__ |
| del ignite |
| except (ImportError, AttributeError): |
| ignite_version = "NOT INSTALLED or UNKNOWN VERSION." |
|
|
| try: |
| import nibabel |
|
|
| nibabel_version = nibabel.__version__ |
| del nibabel |
| except (ImportError, AttributeError): |
| nibabel_version = "NOT INSTALLED or UNKNOWN VERSION." |
|
|
| try: |
| import skimage |
|
|
| skimage_version = skimage.__version__ |
| del skimage |
| except (ImportError, AttributeError): |
| skimage_version = "NOT INSTALLED or UNKNOWN VERSION." |
|
|
| try: |
| import PIL |
|
|
| PIL_version = PIL.__version__ |
| del PIL |
| except (ImportError, AttributeError): |
| PIL_version = "NOT INSTALLED or UNKNOWN VERSION." |
|
|
| try: |
| import tensorboard |
|
|
| tensorboard_version = tensorboard.__version__ |
| del tensorboard |
| except (ImportError, AttributeError): |
| tensorboard_version = "NOT INSTALLED or UNKNOWN VERSION." |
|
|
| try: |
| import gdown |
|
|
| gdown_version = gdown.__version__ |
| del gdown |
| except (ImportError, AttributeError): |
| gdown_version = "NOT INSTALLED or UNKNOWN VERSION." |
|
|
| try: |
| import torchvision |
|
|
| torchvision_version = torchvision.__version__ |
| del torchvision |
| except (ImportError, AttributeError): |
| torchvision_version = "NOT INSTALLED or UNKNOWN VERSION." |
|
|
| try: |
| import itk |
|
|
| itk_version = itk.Version.GetITKVersion() |
| del itk |
| except (ImportError, AttributeError): |
| itk_version = "NOT INSTALLED or UNKNOWN VERSION." |
|
|
|
|
| def get_config_values(): |
| """ |
| Read the package versions into a dictionary. |
| """ |
| output = OrderedDict() |
|
|
| output["MONAI"] = monai.__version__ |
| output["Python"] = sys.version.replace("\n", " ") |
| output["Numpy"] = np.version.full_version |
| output["Pytorch"] = torch.__version__ |
|
|
| return output |
|
|
|
|
| def get_optional_config_values(): |
| """ |
| Read the optional package versions into a dictionary. |
| """ |
| output = OrderedDict() |
|
|
| output["Pytorch Ignite"] = ignite_version |
| output["Nibabel"] = nibabel_version |
| output["scikit-image"] = skimage_version |
| output["Pillow"] = PIL_version |
| output["Tensorboard"] = tensorboard_version |
| output["gdown"] = gdown_version |
| output["TorchVision"] = torchvision_version |
| output["ITK"] = itk_version |
|
|
| return output |
|
|
|
|
| def print_config(file=sys.stdout): |
| """ |
| Print the package versions to `file`. |
| |
| Args: |
| file: `print()` text stream file. Defaults to `sys.stdout`. |
| """ |
| for k, v in get_config_values().items(): |
| print(f"{k} version: {v}", file=file, flush=True) |
|
|
| print("\nOptional dependencies:", file=file, flush=True) |
| for k, v in get_optional_config_values().items(): |
| print(f"{k} version: {v}", file=file, flush=True) |
| print("\nFor details about installing the optional dependencies, please visit:", file=file, flush=True) |
| print( |
| " https://docs.monai.io/en/latest/installation.html#installing-the-recommended-dependencies\n", |
| file=file, |
| flush=True, |
| ) |
|
|
|
|
| def set_visible_devices(*dev_inds): |
| os.environ["CUDA_VISIBLE_DEVICES"] = ",".join(map(str, dev_inds)) |
|
|
|
|
| def get_torch_version_tuple(): |
| """ |
| Returns: |
| tuple of ints represents the pytorch major/minor version. |
| """ |
| return tuple((int(x) for x in torch.__version__.split(".")[:2])) |
|
|