FEA-Bench / testbed /TileDB-Inc__TileDB-Py /.github /workflows /daily-test-build-numpy.yml
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name: TileDB Python CI - With Earliest Supported Version of NumPy
on:
workflow_dispatch:
inputs:
libtiledb_version:
description: TileDB Core Version
required: true
type: string
workflow_call:
inputs:
libtiledb_version:
required: true
type: string
jobs:
test:
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash
strategy:
matrix:
os: [ubuntu-latest, macos-13, macos-14, windows-latest]
python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"]
include:
# https://github.com/scipy/oldest-supported-numpy/blob/main/setup.cfg
- python-version: "3.13"
numpy-version: "2.1.0"
- python-version: "3.12"
numpy-version: "1.26.4"
- python-version: "3.12"
numpy-version: "2.0.1"
- python-version: "3.11"
numpy-version: "1.25.2"
- python-version: "3.11"
numpy-version: "2.0.1"
- python-version: "3.10"
numpy-version: "1.25.2"
- python-version: "3.10"
numpy-version: "2.0.1"
- python-version: "3.9"
numpy-version: "1.25.2"
fail-fast: false
env:
TILEDB_VERSION: ${{ inputs.libtiledb_version }}
MACOSX_DEPLOYMENT_TARGET: "11"
VCPKG_BINARY_SOURCES: 'clear;x-gha,readwrite'
steps:
- name: Checkout TileDB-Py `dev`
uses: actions/checkout@v4
- name: Setup MSVC toolset (VS 2022)
uses: TheMrMilchmann/setup-msvc-dev@v3
if: startsWith(matrix.os, 'windows')
with:
arch: x64
- name: Install Ninja (VS 2022)
uses: seanmiddleditch/gha-setup-ninja@v4
if: startsWith(matrix.os, 'windows')
- name: Enable vcpkg binary caching
uses: actions/github-script@v6
with:
script: |
core.exportVariable('ACTIONS_CACHE_URL', process.env.ACTIONS_CACHE_URL || '');
core.exportVariable('ACTIONS_RUNTIME_TOKEN', process.env.ACTIONS_RUNTIME_TOKEN || '');
- name: "Set CMAKE_GENERATOR"
run: export CMAKE_GENERATOR="Ninja"
if: startsWith(matrix.os, 'windows')
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Print Python version
run: |
which python
which pip
python --version
- name: Print env
run: printenv
- name: Checkout TileDB-Py `dev`
uses: actions/checkout@v3
- name: Build TileDB-Py
run: pip install --verbose .[test]
- name: Install Numpy
run: |
pip install numpy==${{ matrix.numpy-version }}
- name: Print installed Python dependencies
run: pip list
- name: Run tests
run: |
PROJECT_CWD=$PWD
rm tiledb/__init__.py
cd /tmp
pytest -vv --showlocals $PROJECT_CWD
create_issue_on_fail:
permissions:
issues: write
runs-on: ubuntu-latest
needs: test
if: failure() || cancelled()
steps:
- uses: actions/checkout@v3
- name: Create Issue if Build Fails
uses: TileDB-Inc/github-actions/open-issue@main
with:
name: nightly build with earliest supported numpy
label: bug,nightly-failure
assignee: kounelisagis,nguyenv,ihnorton