hc99's picture
Add files using upload-large-folder tool
2c3c408 verified
#include <tiledb/tiledb>
#include <pybind11/numpy.h>
#include <pybind11/pybind11.h>
#include <pybind11/pytypes.h>
#include <pybind11/stl.h>
#include "common.h"
namespace libtiledbcpp {
using namespace tiledb;
using namespace tiledbpy::common;
namespace py = pybind11;
void init_domain(py::module &m) {
py::class_<Dimension>(m, "Dimension")
.def(py::init<Dimension>())
.def(py::init([](const Context &ctx, const std::string &name,
tiledb_datatype_t datatype, py::object domain,
py::object tile_extent) {
void *dim_dom = nullptr;
void *dim_tile = nullptr;
if (!domain.is_none()) {
py::buffer domain_buffer = py::buffer(domain);
py::buffer_info domain_info = domain_buffer.request();
dim_dom = domain_info.ptr;
}
if (!tile_extent.is_none()) {
py::buffer tile_buffer = py::buffer(tile_extent);
py::buffer_info tile_extent_info = tile_buffer.request();
dim_tile = tile_extent_info.ptr;
}
return std::make_unique<Dimension>(
Dimension::create(ctx, name, datatype, dim_dom, dim_tile));
}),
py::keep_alive<1, 2>())
.def(py::init<const Context &, py::capsule>(), py::keep_alive<1, 2>())
.def_property_readonly("_name", &Dimension::name)
.def_property_readonly(
"_domain",
[](Dimension &dim) {
switch (dim.type()) {
case TILEDB_UINT64: {
auto dom = dim.domain<uint64_t>();
return py::make_tuple(dom.first, dom.second);
}
case TILEDB_DATETIME_YEAR:
case TILEDB_DATETIME_MONTH:
case TILEDB_DATETIME_WEEK:
case TILEDB_DATETIME_DAY:
case TILEDB_DATETIME_HR:
case TILEDB_DATETIME_MIN:
case TILEDB_DATETIME_SEC:
case TILEDB_DATETIME_MS:
case TILEDB_DATETIME_US:
case TILEDB_DATETIME_NS:
case TILEDB_DATETIME_PS:
case TILEDB_DATETIME_FS:
case TILEDB_DATETIME_AS:
case TILEDB_INT64: {
auto dom = dim.domain<int64_t>();
return py::make_tuple(dom.first, dom.second);
}
case TILEDB_UINT32: {
auto dom = dim.domain<uint32_t>();
return py::make_tuple(dom.first, dom.second);
}
case TILEDB_INT32: {
auto dom = dim.domain<int32_t>();
return py::make_tuple(dom.first, dom.second);
}
case TILEDB_UINT16: {
auto dom = dim.domain<uint16_t>();
return py::make_tuple(dom.first, dom.second);
}
case TILEDB_INT16: {
auto dom = dim.domain<int16_t>();
return py::make_tuple(dom.first, dom.second);
}
case TILEDB_UINT8: {
auto dom = dim.domain<uint8_t>();
return py::make_tuple(dom.first, dom.second);
}
case TILEDB_INT8: {
auto dom = dim.domain<int8_t>();
return py::make_tuple(dom.first, dom.second);
}
case TILEDB_FLOAT64: {
auto dom = dim.domain<double>();
return py::make_tuple(dom.first, dom.second);
}
case TILEDB_FLOAT32: {
auto dom = dim.domain<float>();
return py::make_tuple(dom.first, dom.second);
}
case TILEDB_STRING_ASCII: {
return py::make_tuple("", "");
}
default:
TPY_ERROR_LOC("Unsupported dtype for Dimension's domain");
}
})
.def_property_readonly(
"_tile",
[](Dimension &dim) -> py::object {
switch (dim.type()) {
case TILEDB_UINT64: {
return py::cast(dim.tile_extent<uint64_t>());
}
case TILEDB_DATETIME_YEAR:
case TILEDB_DATETIME_MONTH:
case TILEDB_DATETIME_WEEK:
case TILEDB_DATETIME_DAY:
case TILEDB_DATETIME_HR:
case TILEDB_DATETIME_MIN:
case TILEDB_DATETIME_SEC:
case TILEDB_DATETIME_MS:
case TILEDB_DATETIME_US:
case TILEDB_DATETIME_NS:
case TILEDB_DATETIME_PS:
case TILEDB_DATETIME_FS:
case TILEDB_DATETIME_AS:
case TILEDB_INT64: {
return py::cast(dim.tile_extent<int64_t>());
}
case TILEDB_UINT32: {
return py::cast(dim.tile_extent<uint32_t>());
}
case TILEDB_INT32: {
return py::cast(dim.tile_extent<int32_t>());
}
case TILEDB_UINT16: {
return py::cast(dim.tile_extent<uint16_t>());
}
case TILEDB_INT16: {
return py::cast(dim.tile_extent<int16_t>());
}
case TILEDB_UINT8: {
return py::cast(dim.tile_extent<uint8_t>());
}
case TILEDB_INT8: {
return py::cast(dim.tile_extent<int8_t>());
}
case TILEDB_FLOAT64: {
return py::cast(dim.tile_extent<double>());
}
case TILEDB_FLOAT32: {
return py::cast(dim.tile_extent<float>());
}
case TILEDB_STRING_ASCII: {
return py::none();
}
default:
TPY_ERROR_LOC("Unsupported dtype for Dimension's tile extent");
}
})
.def_property("_filters", &Dimension::filter_list,
&Dimension::set_filter_list)
.def_property("_ncell", &Dimension::cell_val_num,
&Dimension::set_cell_val_num)
.def_property_readonly("_tiledb_dtype", &Dimension::type)
.def("_domain_to_str", &Dimension::domain_to_str);
py::class_<Domain>(m, "Domain")
.def(py::init<Domain>())
.def(py::init<Context &>())
.def(py::init<const Context &, py::capsule>())
.def("__capsule__",
[](Domain &dom) { return py::capsule(dom.ptr().get(), "dom"); })
.def_property_readonly("_ncell",
[](Domain &dom) { return dom.cell_num(); })
.def_property_readonly("_tiledb_dtype", &Domain::type)
.def_property_readonly("_ndim", &Domain::ndim)
.def_property_readonly("_dims", &Domain::dimensions)
.def("_dim", py::overload_cast<unsigned>(&Domain::dimension, py::const_))
.def("_dim", py::overload_cast<const std::string &>(&Domain::dimension,
py::const_))
.def("_has_dim", &Domain::has_dimension)
.def("_add_dim", &Domain::add_dimension, py::keep_alive<1, 2>())
.def("_dump", [](Domain &dom) {
#if TILEDB_VERSION_MAJOR >= 2 && TILEDB_VERSION_MINOR >= 26
std::stringstream ss;
ss << dom;
return ss.str();
#else
dom.dump();
#endif
});
}
} // namespace libtiledbcpp