| #include <tiledb/tiledb> |
|
|
| #include <pybind11/numpy.h> |
| #include <pybind11/pybind11.h> |
| #include <pybind11/pytypes.h> |
| #include <pybind11/stl.h> |
|
|
| #include "common.h" |
|
|
| namespace libtiledbcpp { |
|
|
| using namespace tiledb; |
| using namespace tiledbpy::common; |
| namespace py = pybind11; |
|
|
| void init_domain(py::module &m) { |
| py::class_<Dimension>(m, "Dimension") |
| .def(py::init<Dimension>()) |
|
|
| .def(py::init([](const Context &ctx, const std::string &name, |
| tiledb_datatype_t datatype, py::object domain, |
| py::object tile_extent) { |
| void *dim_dom = nullptr; |
| void *dim_tile = nullptr; |
|
|
| if (!domain.is_none()) { |
| py::buffer domain_buffer = py::buffer(domain); |
| py::buffer_info domain_info = domain_buffer.request(); |
| dim_dom = domain_info.ptr; |
| } |
|
|
| if (!tile_extent.is_none()) { |
| py::buffer tile_buffer = py::buffer(tile_extent); |
| py::buffer_info tile_extent_info = tile_buffer.request(); |
| dim_tile = tile_extent_info.ptr; |
| } |
|
|
| return std::make_unique<Dimension>( |
| Dimension::create(ctx, name, datatype, dim_dom, dim_tile)); |
| }), |
| py::keep_alive<1, 2>()) |
|
|
| .def(py::init<const Context &, py::capsule>(), py::keep_alive<1, 2>()) |
|
|
| .def_property_readonly("_name", &Dimension::name) |
|
|
| .def_property_readonly( |
| "_domain", |
| [](Dimension &dim) { |
| switch (dim.type()) { |
| case TILEDB_UINT64: { |
| auto dom = dim.domain<uint64_t>(); |
| return py::make_tuple(dom.first, dom.second); |
| } |
| case TILEDB_DATETIME_YEAR: |
| case TILEDB_DATETIME_MONTH: |
| case TILEDB_DATETIME_WEEK: |
| case TILEDB_DATETIME_DAY: |
| case TILEDB_DATETIME_HR: |
| case TILEDB_DATETIME_MIN: |
| case TILEDB_DATETIME_SEC: |
| case TILEDB_DATETIME_MS: |
| case TILEDB_DATETIME_US: |
| case TILEDB_DATETIME_NS: |
| case TILEDB_DATETIME_PS: |
| case TILEDB_DATETIME_FS: |
| case TILEDB_DATETIME_AS: |
| case TILEDB_INT64: { |
| auto dom = dim.domain<int64_t>(); |
| return py::make_tuple(dom.first, dom.second); |
| } |
| case TILEDB_UINT32: { |
| auto dom = dim.domain<uint32_t>(); |
| return py::make_tuple(dom.first, dom.second); |
| } |
| case TILEDB_INT32: { |
| auto dom = dim.domain<int32_t>(); |
| return py::make_tuple(dom.first, dom.second); |
| } |
| case TILEDB_UINT16: { |
| auto dom = dim.domain<uint16_t>(); |
| return py::make_tuple(dom.first, dom.second); |
| } |
| case TILEDB_INT16: { |
| auto dom = dim.domain<int16_t>(); |
| return py::make_tuple(dom.first, dom.second); |
| } |
| case TILEDB_UINT8: { |
| auto dom = dim.domain<uint8_t>(); |
| return py::make_tuple(dom.first, dom.second); |
| } |
| case TILEDB_INT8: { |
| auto dom = dim.domain<int8_t>(); |
| return py::make_tuple(dom.first, dom.second); |
| } |
| case TILEDB_FLOAT64: { |
| auto dom = dim.domain<double>(); |
| return py::make_tuple(dom.first, dom.second); |
| } |
| case TILEDB_FLOAT32: { |
| auto dom = dim.domain<float>(); |
| return py::make_tuple(dom.first, dom.second); |
| } |
| case TILEDB_STRING_ASCII: { |
| return py::make_tuple("", ""); |
| } |
| default: |
| TPY_ERROR_LOC("Unsupported dtype for Dimension's domain"); |
| } |
| }) |
|
|
| .def_property_readonly( |
| "_tile", |
| [](Dimension &dim) -> py::object { |
| switch (dim.type()) { |
| case TILEDB_UINT64: { |
| return py::cast(dim.tile_extent<uint64_t>()); |
| } |
| case TILEDB_DATETIME_YEAR: |
| case TILEDB_DATETIME_MONTH: |
| case TILEDB_DATETIME_WEEK: |
| case TILEDB_DATETIME_DAY: |
| case TILEDB_DATETIME_HR: |
| case TILEDB_DATETIME_MIN: |
| case TILEDB_DATETIME_SEC: |
| case TILEDB_DATETIME_MS: |
| case TILEDB_DATETIME_US: |
| case TILEDB_DATETIME_NS: |
| case TILEDB_DATETIME_PS: |
| case TILEDB_DATETIME_FS: |
| case TILEDB_DATETIME_AS: |
| case TILEDB_INT64: { |
| return py::cast(dim.tile_extent<int64_t>()); |
| } |
| case TILEDB_UINT32: { |
| return py::cast(dim.tile_extent<uint32_t>()); |
| } |
| case TILEDB_INT32: { |
| return py::cast(dim.tile_extent<int32_t>()); |
| } |
| case TILEDB_UINT16: { |
| return py::cast(dim.tile_extent<uint16_t>()); |
| } |
| case TILEDB_INT16: { |
| return py::cast(dim.tile_extent<int16_t>()); |
| } |
| case TILEDB_UINT8: { |
| return py::cast(dim.tile_extent<uint8_t>()); |
| } |
| case TILEDB_INT8: { |
| return py::cast(dim.tile_extent<int8_t>()); |
| } |
| case TILEDB_FLOAT64: { |
| return py::cast(dim.tile_extent<double>()); |
| } |
| case TILEDB_FLOAT32: { |
| return py::cast(dim.tile_extent<float>()); |
| } |
| case TILEDB_STRING_ASCII: { |
| return py::none(); |
| } |
| default: |
| TPY_ERROR_LOC("Unsupported dtype for Dimension's tile extent"); |
| } |
| }) |
|
|
| .def_property("_filters", &Dimension::filter_list, |
| &Dimension::set_filter_list) |
|
|
| .def_property("_ncell", &Dimension::cell_val_num, |
| &Dimension::set_cell_val_num) |
|
|
| .def_property_readonly("_tiledb_dtype", &Dimension::type) |
|
|
| .def("_domain_to_str", &Dimension::domain_to_str); |
|
|
| py::class_<Domain>(m, "Domain") |
| .def(py::init<Domain>()) |
|
|
| .def(py::init<Context &>()) |
|
|
| .def(py::init<const Context &, py::capsule>()) |
|
|
| .def("__capsule__", |
| [](Domain &dom) { return py::capsule(dom.ptr().get(), "dom"); }) |
|
|
| .def_property_readonly("_ncell", |
| [](Domain &dom) { return dom.cell_num(); }) |
|
|
| .def_property_readonly("_tiledb_dtype", &Domain::type) |
|
|
| .def_property_readonly("_ndim", &Domain::ndim) |
|
|
| .def_property_readonly("_dims", &Domain::dimensions) |
|
|
| .def("_dim", py::overload_cast<unsigned>(&Domain::dimension, py::const_)) |
| .def("_dim", py::overload_cast<const std::string &>(&Domain::dimension, |
| py::const_)) |
|
|
| .def("_has_dim", &Domain::has_dimension) |
|
|
| .def("_add_dim", &Domain::add_dimension, py::keep_alive<1, 2>()) |
|
|
| .def("_dump", [](Domain &dom) { |
| #if TILEDB_VERSION_MAJOR >= 2 && TILEDB_VERSION_MINOR >= 26 |
| std::stringstream ss; |
| ss << dom; |
| return ss.str(); |
| #else |
| dom.dump(); |
| #endif |
| }); |
| } |
|
|
| } |
|
|