| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
|
|
| #ifndef TILEDB_ARROW_H |
| #define TILEDB_ARROW_H |
|
|
| |
| |
| |
| |
| |
| |
|
|
| #define ARROW_FLAG_DICTIONARY_ORDERED 1 |
| #define ARROW_FLAG_NULLABLE 2 |
| #define ARROW_FLAG_MAP_KEYS_SORTED 4 |
|
|
| struct ArrowSchema { |
| |
| const char *format; |
| const char *name; |
| const char *metadata; |
| int64_t flags; |
| int64_t n_children; |
| struct ArrowSchema **children; |
| struct ArrowSchema *dictionary; |
|
|
| |
| void (*release)(struct ArrowSchema *); |
| |
| void *private_data; |
| }; |
|
|
| struct ArrowArray { |
| |
| int64_t length; |
| int64_t null_count; |
| int64_t offset; |
| int64_t n_buffers; |
| int64_t n_children; |
| const void **buffers; |
| struct ArrowArray **children; |
| struct ArrowArray *dictionary; |
|
|
| |
| void (*release)(struct ArrowArray *); |
| |
| void *private_data; |
| }; |
| |
| |
|
|
| |
| |
|
|
| #include <memory> |
| #include <optional> |
|
|
| |
| |
| |
|
|
| using _TileDBError = tiledb::TileDBError; |
| #ifndef NDEBUG |
| #define TDB_LERROR(m) \ |
| _TileDBError(std::string(m) + " (" + __FILE__ + ":" + \ |
| std::to_string(__LINE__) + ")"); |
| #else |
| #define TDB_LERROR tiledb::TileDBError |
| #endif |
|
|
| namespace tiledb { |
| namespace arrow { |
|
|
| |
| |
| |
|
|
| |
| struct ArrowInfo { |
| ArrowInfo(std::string fmt, const std::string &rep = std::string()) |
| : fmt_(fmt), rep_(rep){}; |
|
|
| std::string fmt_; |
| std::string rep_; |
| }; |
|
|
| |
| struct TypeInfo { |
| tiledb_datatype_t type; |
| uint64_t elem_size; |
| uint32_t cell_val_num; |
|
|
| |
| bool arrow_large; |
| }; |
|
|
| struct BufferInfo { |
| TypeInfo tdbtype; |
| bool is_var; |
| uint64_t data_num; |
| void *data; |
| uint64_t data_elem_size; |
| uint64_t offsets_num; |
| void *offsets; |
| size_t offsets_elem_size; |
| }; |
|
|
| |
| |
| |
|
|
| |
| ArrowInfo tiledb_buffer_arrow_fmt(BufferInfo bufferinfo, bool use_list = true) { |
| auto typeinfo = bufferinfo.tdbtype; |
| auto cell_val_num = typeinfo.cell_val_num; |
|
|
| |
| (void)use_list; |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
|
|
| switch (typeinfo.type) { |
| |
| case TILEDB_STRING_ASCII: |
| case TILEDB_STRING_UTF8: |
| if (bufferinfo.offsets_elem_size == 4) { |
| return ArrowInfo("u"); |
| } else { |
| return ArrowInfo("U"); |
| } |
| case TILEDB_CHAR: |
| if (!bufferinfo.is_var) { |
| return ArrowInfo("w:" + std::to_string(cell_val_num)); |
| } else if (bufferinfo.offsets_elem_size == 4) { |
| return ArrowInfo("z"); |
| } else { |
| return ArrowInfo("Z"); |
| } |
| case TILEDB_INT32: |
| return ArrowInfo("i"); |
| case TILEDB_INT64: |
| return ArrowInfo("l"); |
| case TILEDB_FLOAT32: |
| return ArrowInfo("f"); |
| case TILEDB_FLOAT64: |
| return ArrowInfo("g"); |
| case TILEDB_BLOB: |
| #if TILEDB_VERSION_MAJOR >= 2 && TILEDB_VERSION_MINOR >= 21 |
| case TILEDB_GEOM_WKB: |
| case TILEDB_GEOM_WKT: |
| #endif |
| return ArrowInfo("B"); |
| case TILEDB_INT8: |
| return ArrowInfo("c"); |
| case TILEDB_UINT8: |
| return ArrowInfo("C"); |
| case TILEDB_INT16: |
| return ArrowInfo("s"); |
| case TILEDB_UINT16: |
| return ArrowInfo("S"); |
| case TILEDB_UINT32: |
| return ArrowInfo("I"); |
| case TILEDB_UINT64: |
| return ArrowInfo("L"); |
|
|
| case TILEDB_TIME_SEC: |
| return ArrowInfo("tts"); |
| case TILEDB_TIME_MS: |
| return ArrowInfo("ttm"); |
| case TILEDB_TIME_US: |
| return ArrowInfo("ttu"); |
| case TILEDB_TIME_NS: |
| return ArrowInfo("ttn"); |
| case TILEDB_DATETIME_SEC: |
| return ArrowInfo("tss:"); |
| case TILEDB_DATETIME_MS: |
| return ArrowInfo("tsm:"); |
| case TILEDB_DATETIME_US: |
| return ArrowInfo("tsu:"); |
| case TILEDB_DATETIME_NS: |
| return ArrowInfo("tsn:"); |
| case TILEDB_DATETIME_DAY: |
| return ArrowInfo("tdD"); |
| |
| case TILEDB_BOOL: |
| return ArrowInfo("C"); |
|
|
| |
| |
| case TILEDB_DATETIME_YEAR: |
| case TILEDB_DATETIME_MONTH: |
| case TILEDB_DATETIME_WEEK: |
| case TILEDB_DATETIME_HR: |
| case TILEDB_DATETIME_MIN: |
| case TILEDB_DATETIME_PS: |
| case TILEDB_DATETIME_FS: |
| case TILEDB_DATETIME_AS: |
| case TILEDB_TIME_MIN: |
| case TILEDB_TIME_PS: |
| case TILEDB_TIME_FS: |
| case TILEDB_TIME_AS: |
| case TILEDB_STRING_UTF16: |
| case TILEDB_STRING_UTF32: |
| case TILEDB_STRING_UCS2: |
| case TILEDB_STRING_UCS4: |
| case TILEDB_ANY: |
| default: |
| break; |
| } |
| throw TDB_LERROR("TileDB-Arrow: tiledb datatype not understood ('" + |
| tiledb::impl::type_to_str(typeinfo.type) + |
| "', cell_val_num: " + std::to_string(cell_val_num) + ")"); |
| } |
|
|
| TypeInfo arrow_type_to_tiledb(ArrowSchema *arw_schema) { |
| auto fmt = std::string(arw_schema->format); |
| bool large = false; |
| if (fmt == "+l") { |
| large = false; |
| assert(arw_schema->n_children == 1); |
| arw_schema = arw_schema->children[0]; |
| } else if (fmt == "+L") { |
| large = true; |
| assert(arw_schema->n_children == 1); |
| arw_schema = arw_schema->children[0]; |
| } |
|
|
| if (fmt == "i") |
| return {TILEDB_INT32, 4, 1, large}; |
| else if (fmt == "l") |
| return {TILEDB_INT64, 8, 1, large}; |
| else if (fmt == "f") |
| return {TILEDB_FLOAT32, 4, 1, large}; |
| else if (fmt == "g") |
| return {TILEDB_FLOAT64, 8, 1, large}; |
| else if (fmt == "B") |
| return {TILEDB_BLOB, 1, 1, large}; |
| else if (fmt == "c") |
| return {TILEDB_INT8, 1, 1, large}; |
| else if (fmt == "C") |
| return {TILEDB_UINT8, 1, 1, large}; |
| else if (fmt == "s") |
| return {TILEDB_INT16, 2, 1, large}; |
| else if (fmt == "S") |
| return {TILEDB_UINT16, 2, 1, large}; |
| else if (fmt == "I") |
| return {TILEDB_UINT32, 4, 1, large}; |
| else if (fmt == "L") |
| return {TILEDB_UINT64, 8, 1, large}; |
| |
| |
| |
| else if (fmt == "tsn:") |
| return {TILEDB_DATETIME_NS, 8, 1, large}; |
| else if (fmt == "z" || fmt == "Z") |
| return {TILEDB_CHAR, 1, TILEDB_VAR_NUM, fmt == "Z"}; |
| else if (fmt.rfind("w:", 0) == 0) { |
| uint32_t cell_val_num = atoi(fmt.substr(2).c_str()); |
| return {TILEDB_CHAR, 1, cell_val_num, fmt == "w"}; |
| } else if (fmt == "u" || fmt == "U") |
| return {TILEDB_STRING_UTF8, 1, TILEDB_VAR_NUM, fmt == "U"}; |
| else if (fmt == "b") |
| return {TILEDB_BOOL, 1, 1, large}; |
| else |
| throw tiledb::TileDBError( |
| "[TileDB-Arrow]: Unknown or unsupported Arrow format string '" + fmt + |
| "'"); |
| } |
|
|
| TypeInfo tiledb_dt_info(const ArraySchema &schema, const std::string &name) { |
| if (schema.has_attribute(name)) { |
| auto attr = schema.attribute(name); |
| auto retval = TypeInfo(); |
| retval.type = attr.type(), |
| retval.elem_size = tiledb::impl::type_size(attr.type()), |
| retval.cell_val_num = attr.cell_val_num(), retval.arrow_large = false; |
| return retval; |
| } else if (schema.domain().has_dimension(name)) { |
| auto dom = schema.domain(); |
| auto dim = dom.dimension(name); |
|
|
| auto retval = TypeInfo(); |
| retval.type = dim.type(); |
| retval.elem_size = tiledb::impl::type_size(dim.type()); |
| retval.cell_val_num = dim.cell_val_num(); |
| retval.arrow_large = false; |
| return retval; |
| } else { |
| throw TDB_LERROR("Schema does not have attribute named '" + name + "'"); |
| } |
| } |
|
|
| |
| |
| |
|
|
| void check_arrow_schema(const ArrowSchema *arw_schema) { |
| if (arw_schema == nullptr) |
| TDB_LERROR("[ArrowIO]: Invalid ArrowSchema object!"); |
|
|
| |
| if (arw_schema->release == nullptr) |
| TDB_LERROR( |
| "[ArrowIO]: Invalid ArrowSchema: cannot import released schema."); |
| if (arw_schema->format != std::string("+s")) |
| TDB_LERROR("[ArrowIO]: Unsupported ArrowSchema: must be struct (+s)."); |
| if (arw_schema->n_children < 1) |
| TDB_LERROR("[ArrowIO]: Unsupported ArrowSchema with 0 children."); |
| if (arw_schema->children == nullptr) |
| TDB_LERROR( |
| "[ArrowIO]: Invalid ArrowSchema with n_children>0 and children==NULL"); |
| } |
|
|
| |
| |
| |
|
|
| |
| |
|
|
| struct CPPArrowSchema { |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| CPPArrowSchema(std::string name, std::string format, |
| std::optional<std::string> metadata, int64_t flags, |
| std::vector<ArrowSchema *> children, |
| std::shared_ptr<CPPArrowSchema> dictionary) |
| : format_(format), name_(name), metadata_(metadata), children_(children), |
| dictionary_(dictionary) { |
| flags_ = flags; |
| n_children_ = children.size(); |
|
|
| schema_ = static_cast<ArrowSchema *>(std::malloc(sizeof(ArrowSchema))); |
| if (schema_ == nullptr) |
| throw tiledb::TileDBError("Failed to allocate ArrowSchema"); |
|
|
| |
| |
| schema_->format = format_.c_str(); |
| schema_->name = name_.c_str(); |
| schema_->metadata = metadata ? metadata.value().c_str() : nullptr; |
| schema_->flags = flags; |
| schema_->n_children = n_children_; |
|
|
| |
| schema_->children = nullptr; |
| schema_->dictionary = nullptr; |
|
|
| |
| schema_->release = ([](ArrowSchema *schema_p) { |
| assert(schema_p->release != nullptr); |
|
|
| |
| for (int64_t i = 0; i < schema_p->n_children; i++) { |
| ArrowSchema *child_schema = schema_p->children[i]; |
| child_schema->release(child_schema); |
| assert(child_schema->release == nullptr); |
| } |
| |
| struct ArrowSchema *dict = schema_p->dictionary; |
| if (dict != nullptr && dict->release != nullptr) { |
| dict->release(dict); |
| assert(dict->release == nullptr); |
| } |
|
|
| |
| schema_p->release = nullptr; |
|
|
| delete static_cast<CPPArrowSchema *>(schema_p->private_data); |
| }); |
|
|
| |
| schema_->private_data = this; |
|
|
| if (n_children_ > 0) { |
| schema_->children = static_cast<ArrowSchema **>(children.data()); |
| } |
|
|
| if (dictionary) { |
| schema_->dictionary = dictionary.get()->ptr(); |
| } |
| } |
|
|
| |
| |
| |
| |
| |
| |
| ~CPPArrowSchema() { |
| if (schema_ != nullptr) |
| std::free(schema_); |
| }; |
|
|
| |
| |
| |
| |
| |
| |
| |
| |
| void export_ptr(ArrowSchema *out_schema) { |
| assert(out_schema != nullptr); |
| memcpy(out_schema, schema_, sizeof(ArrowSchema)); |
| std::free(schema_); |
| schema_ = nullptr; |
| } |
|
|
| ArrowSchema *mutable_ptr() { |
| assert(schema_ != nullptr); |
| return schema_; |
| } |
|
|
| ArrowSchema *ptr() const { |
| assert(schema_ != nullptr); |
| return schema_; |
| } |
|
|
| private: |
| ArrowSchema *schema_; |
| std::string format_; |
| std::string name_; |
| std::optional<std::string> metadata_; |
| int64_t flags_; |
| int64_t n_children_; |
| std::vector<ArrowSchema *> children_; |
| std::shared_ptr<CPPArrowSchema> dictionary_; |
| }; |
|
|
| struct CPPArrowArray { |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| CPPArrowArray(int64_t elem_num, int64_t null_num, int64_t offset, |
| std::vector<std::shared_ptr<CPPArrowArray>> children, |
| std::vector<void *> buffers, ArrowAdapter::release_cb cb, |
| void *cb_data) |
| : owner_cb(cb), owner_cb_data(cb_data) { |
| array_ = static_cast<ArrowArray *>(std::malloc(sizeof(ArrowArray))); |
| if (array_ == nullptr) |
| throw tiledb::TileDBError("Failed to allocate ArrowArray"); |
|
|
| |
| array_->length = elem_num; |
| array_->null_count = null_num; |
| array_->offset = offset; |
| array_->n_buffers = static_cast<int64_t>(buffers.size()); |
| array_->n_children = static_cast<int64_t>(children.size()); |
| array_->buffers = nullptr; |
| array_->children = nullptr; |
| array_->dictionary = nullptr; |
| |
| array_->release = ([](ArrowArray *array_p) { |
| assert(array_p->release != nullptr); |
|
|
| |
| for (int64_t i = 0; i < array_p->n_children; i++) { |
| ArrowArray *child_array = array_p->children[i]; |
| child_array->release(child_array); |
| assert(child_array->release == nullptr); |
| } |
|
|
| |
| struct ArrowArray *dict = array_p->dictionary; |
| if (dict != nullptr && dict->release != nullptr) { |
| dict->release(dict); |
| assert(dict->release == nullptr); |
| } |
|
|
| |
| array_p->release = nullptr; |
|
|
| |
| auto self = static_cast<CPPArrowArray *>(array_p->private_data); |
| if (self->owner_cb) { |
| self->owner_cb(self->owner_cb_data); |
| } |
|
|
| delete self; |
| }); |
| array_->private_data = this; |
|
|
| buffers_ = buffers; |
| array_->buffers = const_cast<const void **>(buffers_.data()); |
| } |
|
|
| |
| |
| |
| |
| |
| |
| ~CPPArrowArray() { |
| if (array_ != nullptr) { |
| |
| std::free(array_); |
| } |
| } |
|
|
| void export_ptr(ArrowArray *out_array) { |
| assert(out_array != nullptr); |
| memcpy(out_array, array_, sizeof(ArrowArray)); |
| std::free(array_); |
| array_ = nullptr; |
| } |
|
|
| ArrowArray *ptr() const { |
| assert(array_ != nullptr); |
| return array_; |
| } |
|
|
| ArrowArray *mutable_ptr() { |
| assert(array_ != nullptr); |
| return array_; |
| } |
|
|
| private: |
| ArrowArray *array_; |
| std::vector<void *> buffers_; |
| ArrowAdapter::release_cb owner_cb; |
| void *owner_cb_data; |
| }; |
|
|
| |
| |
| |
|
|
| class ArrowImporter { |
| public: |
| ArrowImporter(Query *const query); |
| ~ArrowImporter(); |
|
|
| void import_(std::string name, ArrowArray *array, ArrowSchema *schema); |
|
|
| private: |
| Query *const query_; |
| std::vector<void *> offset_buffers_; |
|
|
| }; |
|
|
| ArrowImporter::ArrowImporter(Query *const query) : query_(query) {} |
|
|
| ArrowImporter::~ArrowImporter() { |
| for (auto p : offset_buffers_) { |
| std::free(p); |
| } |
| } |
|
|
| void ArrowImporter::import_(std::string name, ArrowArray *arw_array, |
| ArrowSchema *arw_schema) { |
| auto typeinfo = arrow_type_to_tiledb(arw_schema); |
|
|
| |
|
|
| if (typeinfo.cell_val_num == TILEDB_VAR_NUM) { |
| assert(arw_array->n_buffers == 3); |
|
|
| void *p_offsets = const_cast<void *>(arw_array->buffers[1]); |
| void *p_data = const_cast<void *>(arw_array->buffers[2]); |
| const uint64_t num_offsets = arw_array->length; |
| uint64_t data_nbytes = 0; |
| if (typeinfo.arrow_large) { |
| data_nbytes = |
| static_cast<uint64_t *>(p_offsets)[num_offsets] * typeinfo.elem_size; |
| } else { |
| data_nbytes = |
| static_cast<uint32_t *>(p_offsets)[num_offsets] * typeinfo.elem_size; |
| } |
|
|
| |
| |
| query_->set_data_buffer(name, p_data, data_nbytes); |
| query_->set_offsets_buffer(name, static_cast<uint64_t *>(p_offsets), |
| num_offsets + 1); |
| } else { |
| |
| assert(arw_array->n_buffers == 2); |
|
|
| void *p_data = const_cast<void *>(arw_array->buffers[1]); |
| uint64_t data_num = arw_array->length; |
|
|
| query_->set_data_buffer(name, static_cast<void *>(p_data), data_num); |
| } |
| } |
|
|
| |
| |
| |
|
|
| class ArrowExporter { |
| public: |
| ArrowExporter(Context *const ctx, Query *const query); |
|
|
| void export_(const std::string &name, ArrowArray *array, ArrowSchema *schema, |
| ArrowAdapter::release_cb cb, void *private_data); |
|
|
| BufferInfo buffer_info(const std::string &name); |
|
|
| private: |
| Context *const ctx_; |
| Query *const query_; |
| }; |
|
|
| |
| ArrowExporter::ArrowExporter(Context *const ctx, Query *const query) |
| : ctx_(ctx), query_(query) {} |
|
|
| BufferInfo ArrowExporter::buffer_info(const std::string &name) { |
| void *data = nullptr; |
| uint64_t data_nelem = 0; |
| uint64_t *offsets = nullptr; |
| uint64_t offsets_nelem = 0; |
| uint64_t elem_size = 0; |
|
|
| auto typeinfo = tiledb_dt_info(query_->array().schema(), name); |
|
|
| auto result_elts = query_->result_buffer_elements(); |
| auto result_elt_iter = result_elts.find(name); |
| if (result_elt_iter == result_elts.end()) { |
| TDB_LERROR("No results found for attribute '" + name + "'"); |
| } |
|
|
| uint8_t offsets_elem_nbytes = |
| ctx_->config().get("sm.var_offsets.bitsize") == "32" ? 4 : 8; |
|
|
| bool is_var = typeinfo.cell_val_num == TILEDB_VAR_NUM; |
|
|
| |
| if (is_var) { |
| query_->get_data_buffer(name, &data, &data_nelem, &elem_size); |
| query_->get_offsets_buffer(name, &offsets, &offsets_nelem); |
|
|
| |
| |
| |
| |
| |
| |
| uint64_t *offsets_nbytes = nullptr; |
| uint64_t *data_nbytes = nullptr; |
| ctx_->handle_error( |
| tiledb_query_get_data_buffer(ctx_->ptr().get(), query_->ptr().get(), |
| name.c_str(), &data, &data_nbytes)); |
| ctx_->handle_error(tiledb_query_get_offsets_buffer( |
| ctx_->ptr().get(), query_->ptr().get(), name.c_str(), &offsets, |
| &offsets_nbytes)); |
| offsets_nelem = *offsets_nbytes / offsets_elem_nbytes; |
| } else { |
| query_->get_data_buffer(name, &data, &data_nelem, &elem_size); |
| } |
|
|
| auto retval = BufferInfo(); |
| retval.tdbtype = typeinfo; |
| retval.is_var = is_var; |
| retval.data_num = data_nelem; |
| retval.data = data; |
| retval.data_elem_size = elem_size; |
| retval.offsets_num = (is_var ? offsets_nelem : 1); |
| retval.offsets = offsets; |
| retval.offsets_elem_size = offsets_elem_nbytes; |
|
|
| return retval; |
| } |
|
|
| int64_t flags_for_buffer(BufferInfo binfo) { |
| |
| |
| |
| |
| |
| (void)binfo; |
| return 0; |
| } |
|
|
| template <typename T> T cast_checked(uint64_t val) { |
| if (val > std::numeric_limits<T>::max()) { |
| throw tiledb::TileDBError( |
| "[TileDB-Arrow] Value too large to cast to requested type"); |
| } |
| return static_cast<T>(val); |
| } |
|
|
| void ArrowExporter::export_(const std::string &name, ArrowArray *array, |
| ArrowSchema *schema, ArrowAdapter::release_cb cb, |
| void *cb_data) { |
| auto bufferinfo = this->buffer_info(name); |
|
|
| if (schema == nullptr || array == nullptr) { |
| throw tiledb::TileDBError( |
| "ArrowExporter: received invalid pointer to output array or schema."); |
| } |
|
|
| auto arrow_fmt = tiledb_buffer_arrow_fmt(bufferinfo); |
| auto arrow_flags = flags_for_buffer(bufferinfo); |
|
|
| |
| |
| |
| CPPArrowSchema *cpp_schema = new CPPArrowSchema( |
| name, arrow_fmt.fmt_, std::nullopt, arrow_flags, {}, {}); |
|
|
| std::vector<void *> buffers; |
| if (bufferinfo.is_var) { |
| buffers = {nullptr, bufferinfo.offsets, bufferinfo.data}; |
| } else { |
| buffers = {nullptr, bufferinfo.data}; |
| } |
| cpp_schema->export_ptr(schema); |
|
|
| size_t elem_num = bufferinfo.data_num; |
| if (bufferinfo.is_var) { |
| |
| elem_num = (bufferinfo.offsets_num == 0) ? 0 : bufferinfo.offsets_num - 1; |
| } else { |
| if (arrow_fmt.fmt_.rfind("w:", 0) == 0) { |
| |
| |
| |
| elem_num = bufferinfo.data_num / bufferinfo.tdbtype.cell_val_num; |
| } else if (arrow_fmt.fmt_ == "tdD") { |
| |
| |
| for (size_t i = 0; i < bufferinfo.data_num; i++) { |
| uint32_t lost_data = *(reinterpret_cast<uint32_t *>( |
| static_cast<uint8_t *>(buffers[1]) + i * 8 + 4)); |
| if (lost_data != 0) { |
| throw tiledb::TileDBError( |
| "[TileDB-Arrow] Non-zero data detected in the memory buffer at " |
| "position that will be overwritten"); |
| } |
|
|
| static_cast<uint32_t *>(buffers[1])[i] = |
| cast_checked<uint32_t>(static_cast<uint64_t *>(buffers[1])[i]); |
| } |
| } |
| } |
|
|
| auto cpp_arrow_array = new CPPArrowArray(elem_num, |
| 0, |
| 0, |
| {}, |
| buffers, cb, cb_data); |
| cpp_arrow_array->export_ptr(array); |
| } |
|
|
| |
| |
|
|
| |
| |
|
|
| ArrowAdapter::ArrowAdapter(Context *const ctx, Query *const query) |
| : importer_(nullptr), exporter_(nullptr) { |
| importer_ = new ArrowImporter(query); |
| if (!importer_) { |
| throw tiledb::TileDBError( |
| "[TileDB-Arrow] Failed to allocate ArrowImporter!"); |
| } |
| exporter_ = new ArrowExporter(ctx, query); |
| if (!exporter_) { |
| throw tiledb::TileDBError( |
| "[TileDB-Arrow] Failed to allocate ArrowImporter!"); |
| } |
| } |
|
|
| void ArrowAdapter::export_buffer(const char *name, void *arrow_array, |
| void *arrow_schema, release_cb cb, |
| void *private_data) { |
| exporter_->export_(name, (ArrowArray *)arrow_array, |
| (ArrowSchema *)arrow_schema, cb, private_data); |
| } |
|
|
| void ArrowAdapter::import_buffer(const char *name, void *arrow_array, |
| void *arrow_schema) { |
| importer_->import_(name, (ArrowArray *)arrow_array, |
| (ArrowSchema *)arrow_schema); |
| } |
|
|
| ArrowAdapter::~ArrowAdapter() { |
| if (importer_) |
| delete importer_; |
| if (exporter_) |
| delete exporter_; |
| } |
|
|
| void query_get_buffer_arrow_array(Context *const ctx, Query *const query, |
| std::string name, void *v_arw_array, |
| void *v_arw_schema) { |
| ArrowExporter exporter(ctx, query); |
|
|
| exporter.export_(name, (ArrowArray *)v_arw_array, (ArrowSchema *)v_arw_schema, |
| nullptr, nullptr); |
| } |
|
|
| void query_set_buffer_arrow_array(Query *const query, std::string name, |
| void *v_arw_array, void *v_arw_schema) { |
| auto arw_schema = (ArrowSchema *)v_arw_schema; |
| auto arw_array = (ArrowArray *)v_arw_array; |
| check_arrow_schema(arw_schema); |
|
|
| ArrowImporter importer(query); |
| importer.import_(name, arw_array, arw_schema); |
| } |
|
|
| } |
| } |
|
|
| |
| |
|
|
| #endif |
|
|