| |
|
|
| import math |
|
|
| import numpy as np |
|
|
| from .core import Kernel1D, Kernel2D, Kernel |
| from .utils import has_even_axis, raise_even_kernel_exception |
| from astropy.modeling import models |
| from astropy.modeling.core import Fittable1DModel, Fittable2DModel |
| from astropy.utils.decorators import deprecated_renamed_argument |
|
|
| __all__ = ['Gaussian1DKernel', 'Gaussian2DKernel', 'CustomKernel', |
| 'Box1DKernel', 'Box2DKernel', 'Tophat2DKernel', |
| 'Trapezoid1DKernel', 'MexicanHat1DKernel', 'MexicanHat2DKernel', |
| 'AiryDisk2DKernel', 'Moffat2DKernel', 'Model1DKernel', |
| 'Model2DKernel', 'TrapezoidDisk2DKernel', 'Ring2DKernel'] |
|
|
|
|
| def _round_up_to_odd_integer(value): |
| i = math.ceil(value) |
| if i % 2 == 0: |
| return i + 1 |
| else: |
| return i |
|
|
|
|
| class Gaussian1DKernel(Kernel1D): |
| """ |
| 1D Gaussian filter kernel. |
| |
| The Gaussian filter is a filter with great smoothing properties. It is |
| isotropic and does not produce artifacts. |
| |
| Parameters |
| ---------- |
| stddev : number |
| Standard deviation of the Gaussian kernel. |
| x_size : odd int, optional |
| Size of the kernel array. Default = 8 * stddev |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by linearly interpolating |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. Very slow. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. If the factor |
| is too large, evaluation can be very slow. |
| |
| |
| See Also |
| -------- |
| Box1DKernel, Trapezoid1DKernel, MexicanHat1DKernel |
| |
| |
| Examples |
| -------- |
| Kernel response: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import Gaussian1DKernel |
| gauss_1D_kernel = Gaussian1DKernel(10) |
| plt.plot(gauss_1D_kernel, drawstyle='steps') |
| plt.xlabel('x [pixels]') |
| plt.ylabel('value') |
| plt.show() |
| """ |
| _separable = True |
| _is_bool = False |
|
|
| def __init__(self, stddev, **kwargs): |
| self._model = models.Gaussian1D(1. / (np.sqrt(2 * np.pi) * stddev), |
| 0, stddev) |
| self._default_size = _round_up_to_odd_integer(8 * stddev) |
| super().__init__(**kwargs) |
| self._truncation = np.abs(1. - self._array.sum()) |
|
|
|
|
| class Gaussian2DKernel(Kernel2D): |
| """ |
| 2D Gaussian filter kernel. |
| |
| The Gaussian filter is a filter with great smoothing properties. It is |
| isotropic and does not produce artifacts. |
| |
| Parameters |
| ---------- |
| x_stddev : float |
| Standard deviation of the Gaussian in x before rotating by theta. |
| y_stddev : float |
| Standard deviation of the Gaussian in y before rotating by theta. |
| theta : float |
| Rotation angle in radians. The rotation angle increases |
| counterclockwise. |
| x_size : odd int, optional |
| Size in x direction of the kernel array. Default = 8 * stddev. |
| y_size : odd int, optional |
| Size in y direction of the kernel array. Default = 8 * stddev. |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by performing a bilinear interpolation |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| |
| See Also |
| -------- |
| Box2DKernel, Tophat2DKernel, MexicanHat2DKernel, Ring2DKernel, |
| TrapezoidDisk2DKernel, AiryDisk2DKernel, Moffat2DKernel |
| |
| Examples |
| -------- |
| Kernel response: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import Gaussian2DKernel |
| gaussian_2D_kernel = Gaussian2DKernel(10) |
| plt.imshow(gaussian_2D_kernel, interpolation='none', origin='lower') |
| plt.xlabel('x [pixels]') |
| plt.ylabel('y [pixels]') |
| plt.colorbar() |
| plt.show() |
| |
| """ |
| _separable = True |
| _is_bool = False |
|
|
| @deprecated_renamed_argument('stddev', 'x_stddev', '3.0') |
| def __init__(self, x_stddev, y_stddev=None, theta=0.0, **kwargs): |
| if y_stddev is None: |
| y_stddev = x_stddev |
| self._model = models.Gaussian2D(1. / (2 * np.pi * x_stddev * y_stddev), |
| 0, 0, x_stddev=x_stddev, |
| y_stddev=y_stddev, theta=theta) |
| self._default_size = _round_up_to_odd_integer( |
| 8 * np.max([x_stddev, y_stddev])) |
| super().__init__(**kwargs) |
| self._truncation = np.abs(1. - self._array.sum()) |
|
|
|
|
| class Box1DKernel(Kernel1D): |
| """ |
| 1D Box filter kernel. |
| |
| The Box filter or running mean is a smoothing filter. It is not isotropic |
| and can produce artifacts, when applied repeatedly to the same data. |
| |
| By default the Box kernel uses the ``linear_interp`` discretization mode, |
| which allows non-shifting, even-sized kernels. This is achieved by |
| weighting the edge pixels with 1/2. E.g a Box kernel with an effective |
| smoothing of 4 pixel would have the following array: [0.5, 1, 1, 1, 0.5]. |
| |
| |
| Parameters |
| ---------- |
| width : number |
| Width of the filter kernel. |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' (default) |
| Discretize model by linearly interpolating |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| See Also |
| -------- |
| Gaussian1DKernel, Trapezoid1DKernel, MexicanHat1DKernel |
| |
| |
| Examples |
| -------- |
| Kernel response function: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import Box1DKernel |
| box_1D_kernel = Box1DKernel(9) |
| plt.plot(box_1D_kernel, drawstyle='steps') |
| plt.xlim(-1, 9) |
| plt.xlabel('x [pixels]') |
| plt.ylabel('value') |
| plt.show() |
| |
| """ |
| _separable = True |
| _is_bool = True |
|
|
| def __init__(self, width, **kwargs): |
| self._model = models.Box1D(1. / width, 0, width) |
| self._default_size = _round_up_to_odd_integer(width) |
| kwargs['mode'] = 'linear_interp' |
| super().__init__(**kwargs) |
| self._truncation = 0 |
| self.normalize() |
|
|
|
|
| class Box2DKernel(Kernel2D): |
| """ |
| 2D Box filter kernel. |
| |
| The Box filter or running mean is a smoothing filter. It is not isotropic |
| and can produce artifact, when applied repeatedly to the same data. |
| |
| By default the Box kernel uses the ``linear_interp`` discretization mode, |
| which allows non-shifting, even-sized kernels. This is achieved by |
| weighting the edge pixels with 1/2. |
| |
| |
| Parameters |
| ---------- |
| width : number |
| Width of the filter kernel. |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' (default) |
| Discretize model by performing a bilinear interpolation |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| |
| See Also |
| -------- |
| Gaussian2DKernel, Tophat2DKernel, MexicanHat2DKernel, Ring2DKernel, |
| TrapezoidDisk2DKernel, AiryDisk2DKernel, Moffat2DKernel |
| |
| Examples |
| -------- |
| Kernel response: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import Box2DKernel |
| box_2D_kernel = Box2DKernel(9) |
| plt.imshow(box_2D_kernel, interpolation='none', origin='lower', |
| vmin=0.0, vmax=0.015) |
| plt.xlim(-1, 9) |
| plt.ylim(-1, 9) |
| plt.xlabel('x [pixels]') |
| plt.ylabel('y [pixels]') |
| plt.colorbar() |
| plt.show() |
| """ |
| _separable = True |
| _is_bool = True |
|
|
| def __init__(self, width, **kwargs): |
| self._model = models.Box2D(1. / width ** 2, 0, 0, width, width) |
| self._default_size = _round_up_to_odd_integer(width) |
| kwargs['mode'] = 'linear_interp' |
| super().__init__(**kwargs) |
| self._truncation = 0 |
| self.normalize() |
|
|
|
|
| class Tophat2DKernel(Kernel2D): |
| """ |
| 2D Tophat filter kernel. |
| |
| The Tophat filter is an isotropic smoothing filter. It can produce |
| artifacts when applied repeatedly on the same data. |
| |
| Parameters |
| ---------- |
| radius : int |
| Radius of the filter kernel. |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by performing a bilinear interpolation |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| |
| See Also |
| -------- |
| Gaussian2DKernel, Box2DKernel, MexicanHat2DKernel, Ring2DKernel, |
| TrapezoidDisk2DKernel, AiryDisk2DKernel, Moffat2DKernel |
| |
| Examples |
| -------- |
| Kernel response: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import Tophat2DKernel |
| tophat_2D_kernel = Tophat2DKernel(40) |
| plt.imshow(tophat_2D_kernel, interpolation='none', origin='lower') |
| plt.xlabel('x [pixels]') |
| plt.ylabel('y [pixels]') |
| plt.colorbar() |
| plt.show() |
| |
| """ |
| def __init__(self, radius, **kwargs): |
| self._model = models.Disk2D(1. / (np.pi * radius ** 2), 0, 0, radius) |
| self._default_size = _round_up_to_odd_integer(2 * radius) |
| super().__init__(**kwargs) |
| self._truncation = 0 |
|
|
|
|
| class Ring2DKernel(Kernel2D): |
| """ |
| 2D Ring filter kernel. |
| |
| The Ring filter kernel is the difference between two Tophat kernels of |
| different width. This kernel is useful for, e.g., background estimation. |
| |
| Parameters |
| ---------- |
| radius_in : number |
| Inner radius of the ring kernel. |
| width : number |
| Width of the ring kernel. |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by performing a bilinear interpolation |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| See Also |
| -------- |
| Gaussian2DKernel, Box2DKernel, Tophat2DKernel, MexicanHat2DKernel, |
| Ring2DKernel, AiryDisk2DKernel, Moffat2DKernel |
| |
| Examples |
| -------- |
| Kernel response: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import Ring2DKernel |
| ring_2D_kernel = Ring2DKernel(9, 8) |
| plt.imshow(ring_2D_kernel, interpolation='none', origin='lower') |
| plt.xlabel('x [pixels]') |
| plt.ylabel('y [pixels]') |
| plt.colorbar() |
| plt.show() |
| """ |
| def __init__(self, radius_in, width, **kwargs): |
| radius_out = radius_in + width |
| self._model = models.Ring2D(1. / (np.pi * (radius_out ** 2 - radius_in ** 2)), |
| 0, 0, radius_in, width) |
| self._default_size = _round_up_to_odd_integer(2 * radius_out) |
| super().__init__(**kwargs) |
| self._truncation = 0 |
|
|
|
|
| class Trapezoid1DKernel(Kernel1D): |
| """ |
| 1D trapezoid kernel. |
| |
| Parameters |
| ---------- |
| width : number |
| Width of the filter kernel, defined as the width of the constant part, |
| before it begins to slope down. |
| slope : number |
| Slope of the filter kernel's tails |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by linearly interpolating |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| See Also |
| -------- |
| Box1DKernel, Gaussian1DKernel, MexicanHat1DKernel |
| |
| Examples |
| -------- |
| Kernel response: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import Trapezoid1DKernel |
| trapezoid_1D_kernel = Trapezoid1DKernel(17, slope=0.2) |
| plt.plot(trapezoid_1D_kernel, drawstyle='steps') |
| plt.xlabel('x [pixels]') |
| plt.ylabel('amplitude') |
| plt.xlim(-1, 28) |
| plt.show() |
| """ |
| _is_bool = False |
|
|
| def __init__(self, width, slope=1., **kwargs): |
| self._model = models.Trapezoid1D(1, 0, width, slope) |
| self._default_size = _round_up_to_odd_integer(width + 2. / slope) |
| super().__init__(**kwargs) |
| self._truncation = 0 |
| self.normalize() |
|
|
|
|
| class TrapezoidDisk2DKernel(Kernel2D): |
| """ |
| 2D trapezoid kernel. |
| |
| Parameters |
| ---------- |
| radius : number |
| Width of the filter kernel, defined as the width of the constant part, |
| before it begins to slope down. |
| slope : number |
| Slope of the filter kernel's tails |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by performing a bilinear interpolation |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| See Also |
| -------- |
| Gaussian2DKernel, Box2DKernel, Tophat2DKernel, MexicanHat2DKernel, |
| Ring2DKernel, AiryDisk2DKernel, Moffat2DKernel |
| |
| Examples |
| -------- |
| Kernel response: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import TrapezoidDisk2DKernel |
| trapezoid_2D_kernel = TrapezoidDisk2DKernel(20, slope=0.2) |
| plt.imshow(trapezoid_2D_kernel, interpolation='none', origin='lower') |
| plt.xlabel('x [pixels]') |
| plt.ylabel('y [pixels]') |
| plt.colorbar() |
| plt.show() |
| |
| """ |
| _is_bool = False |
|
|
| def __init__(self, radius, slope=1., **kwargs): |
| self._model = models.TrapezoidDisk2D(1, 0, 0, radius, slope) |
| self._default_size = _round_up_to_odd_integer(2 * radius + 2. / slope) |
| super().__init__(**kwargs) |
| self._truncation = 0 |
| self.normalize() |
|
|
|
|
| class MexicanHat1DKernel(Kernel1D): |
| """ |
| 1D Mexican hat filter kernel. |
| |
| The Mexican Hat, or inverted Gaussian-Laplace filter, is a |
| bandpass filter. It smooths the data and removes slowly varying |
| or constant structures (e.g. Background). It is useful for peak or |
| multi-scale detection. |
| |
| This kernel is derived from a normalized Gaussian function, by |
| computing the second derivative. This results in an amplitude |
| at the kernels center of 1. / (sqrt(2 * pi) * width ** 3). The |
| normalization is the same as for `scipy.ndimage.gaussian_laplace`, |
| except for a minus sign. |
| |
| Parameters |
| ---------- |
| width : number |
| Width of the filter kernel, defined as the standard deviation |
| of the Gaussian function from which it is derived. |
| x_size : odd int, optional |
| Size in x direction of the kernel array. Default = 8 * width. |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by linearly interpolating |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| |
| See Also |
| -------- |
| Box1DKernel, Gaussian1DKernel, Trapezoid1DKernel |
| |
| Examples |
| -------- |
| Kernel response: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import MexicanHat1DKernel |
| mexicanhat_1D_kernel = MexicanHat1DKernel(10) |
| plt.plot(mexicanhat_1D_kernel, drawstyle='steps') |
| plt.xlabel('x [pixels]') |
| plt.ylabel('value') |
| plt.show() |
| |
| """ |
| _is_bool = True |
|
|
| def __init__(self, width, **kwargs): |
| amplitude = 1.0 / (np.sqrt(2 * np.pi) * width ** 3) |
| self._model = models.MexicanHat1D(amplitude, 0, width) |
| self._default_size = _round_up_to_odd_integer(8 * width) |
| super().__init__(**kwargs) |
| self._truncation = np.abs(self._array.sum() / self._array.size) |
|
|
|
|
| class MexicanHat2DKernel(Kernel2D): |
| """ |
| 2D Mexican hat filter kernel. |
| |
| The Mexican Hat, or inverted Gaussian-Laplace filter, is a |
| bandpass filter. It smooths the data and removes slowly varying |
| or constant structures (e.g. Background). It is useful for peak or |
| multi-scale detection. |
| |
| This kernel is derived from a normalized Gaussian function, by |
| computing the second derivative. This results in an amplitude |
| at the kernels center of 1. / (pi * width ** 4). The normalization |
| is the same as for `scipy.ndimage.gaussian_laplace`, except |
| for a minus sign. |
| |
| Parameters |
| ---------- |
| width : number |
| Width of the filter kernel, defined as the standard deviation |
| of the Gaussian function from which it is derived. |
| x_size : odd int, optional |
| Size in x direction of the kernel array. Default = 8 * width. |
| y_size : odd int, optional |
| Size in y direction of the kernel array. Default = 8 * width. |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by performing a bilinear interpolation |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| |
| See Also |
| -------- |
| Gaussian2DKernel, Box2DKernel, Tophat2DKernel, Ring2DKernel, |
| TrapezoidDisk2DKernel, AiryDisk2DKernel, Moffat2DKernel |
| |
| Examples |
| -------- |
| Kernel response: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import MexicanHat2DKernel |
| mexicanhat_2D_kernel = MexicanHat2DKernel(10) |
| plt.imshow(mexicanhat_2D_kernel, interpolation='none', origin='lower') |
| plt.xlabel('x [pixels]') |
| plt.ylabel('y [pixels]') |
| plt.colorbar() |
| plt.show() |
| """ |
| _is_bool = False |
|
|
| def __init__(self, width, **kwargs): |
| amplitude = 1.0 / (np.pi * width ** 4) |
| self._model = models.MexicanHat2D(amplitude, 0, 0, width) |
| self._default_size = _round_up_to_odd_integer(8 * width) |
| super().__init__(**kwargs) |
| self._truncation = np.abs(self._array.sum() / self._array.size) |
|
|
|
|
| class AiryDisk2DKernel(Kernel2D): |
| """ |
| 2D Airy disk kernel. |
| |
| This kernel models the diffraction pattern of a circular aperture. This |
| kernel is normalized to a peak value of 1. |
| |
| Parameters |
| ---------- |
| radius : float |
| The radius of the Airy disk kernel (radius of the first zero). |
| x_size : odd int, optional |
| Size in x direction of the kernel array. Default = 8 * radius. |
| y_size : odd int, optional |
| Size in y direction of the kernel array. Default = 8 * radius. |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by performing a bilinear interpolation |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| See Also |
| -------- |
| Gaussian2DKernel, Box2DKernel, Tophat2DKernel, MexicanHat2DKernel, |
| Ring2DKernel, TrapezoidDisk2DKernel, AiryDisk2DKernel, Moffat2DKernel |
| |
| Examples |
| -------- |
| Kernel response: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import AiryDisk2DKernel |
| airydisk_2D_kernel = AiryDisk2DKernel(10) |
| plt.imshow(airydisk_2D_kernel, interpolation='none', origin='lower') |
| plt.xlabel('x [pixels]') |
| plt.ylabel('y [pixels]') |
| plt.colorbar() |
| plt.show() |
| """ |
| _is_bool = False |
|
|
| def __init__(self, radius, **kwargs): |
| self._model = models.AiryDisk2D(1, 0, 0, radius) |
| self._default_size = _round_up_to_odd_integer(8 * radius) |
| super().__init__(**kwargs) |
| self.normalize() |
| self._truncation = None |
|
|
|
|
| class Moffat2DKernel(Kernel2D): |
| """ |
| 2D Moffat kernel. |
| |
| This kernel is a typical model for a seeing limited PSF. |
| |
| Parameters |
| ---------- |
| gamma : float |
| Core width of the Moffat model. |
| alpha : float |
| Power index of the Moffat model. |
| x_size : odd int, optional |
| Size in x direction of the kernel array. Default = 8 * radius. |
| y_size : odd int, optional |
| Size in y direction of the kernel array. Default = 8 * radius. |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by performing a bilinear interpolation |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| See Also |
| -------- |
| Gaussian2DKernel, Box2DKernel, Tophat2DKernel, MexicanHat2DKernel, |
| Ring2DKernel, TrapezoidDisk2DKernel, AiryDisk2DKernel |
| |
| Examples |
| -------- |
| Kernel response: |
| |
| .. plot:: |
| :include-source: |
| |
| import matplotlib.pyplot as plt |
| from astropy.convolution import Moffat2DKernel |
| moffat_2D_kernel = Moffat2DKernel(3, 2) |
| plt.imshow(moffat_2D_kernel, interpolation='none', origin='lower') |
| plt.xlabel('x [pixels]') |
| plt.ylabel('y [pixels]') |
| plt.colorbar() |
| plt.show() |
| """ |
| _is_bool = False |
|
|
| def __init__(self, gamma, alpha, **kwargs): |
| |
| |
| amplitude = (alpha - 1.0) / (np.pi * gamma * gamma) |
| self._model = models.Moffat2D(amplitude, 0, 0, gamma, alpha) |
| self._default_size = _round_up_to_odd_integer(4.0 * self._model.fwhm) |
| super().__init__(**kwargs) |
| self.normalize() |
| self._truncation = None |
|
|
|
|
| class Model1DKernel(Kernel1D): |
| """ |
| Create kernel from 1D model. |
| |
| The model has to be centered on x = 0. |
| |
| Parameters |
| ---------- |
| model : `~astropy.modeling.Fittable1DModel` |
| Kernel response function model |
| x_size : odd int, optional |
| Size in x direction of the kernel array. Default = 8 * width. |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by linearly interpolating |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| Raises |
| ------ |
| TypeError |
| If model is not an instance of `~astropy.modeling.Fittable1DModel` |
| |
| See also |
| -------- |
| Model2DKernel : Create kernel from `~astropy.modeling.Fittable2DModel` |
| CustomKernel : Create kernel from list or array |
| |
| Examples |
| -------- |
| Define a Gaussian1D model: |
| |
| >>> from astropy.modeling.models import Gaussian1D |
| >>> from astropy.convolution.kernels import Model1DKernel |
| >>> gauss = Gaussian1D(1, 0, 2) |
| |
| And create a custom one dimensional kernel from it: |
| |
| >>> gauss_kernel = Model1DKernel(gauss, x_size=9) |
| |
| This kernel can now be used like a usual Astropy kernel. |
| """ |
| _separable = False |
| _is_bool = False |
|
|
| def __init__(self, model, **kwargs): |
| if isinstance(model, Fittable1DModel): |
| self._model = model |
| else: |
| raise TypeError("Must be Fittable1DModel") |
| super().__init__(**kwargs) |
|
|
|
|
| class Model2DKernel(Kernel2D): |
| """ |
| Create kernel from 2D model. |
| |
| The model has to be centered on x = 0 and y = 0. |
| |
| Parameters |
| ---------- |
| model : `~astropy.modeling.Fittable2DModel` |
| Kernel response function model |
| x_size : odd int, optional |
| Size in x direction of the kernel array. Default = 8 * width. |
| y_size : odd int, optional |
| Size in y direction of the kernel array. Default = 8 * width. |
| mode : str, optional |
| One of the following discretization modes: |
| * 'center' (default) |
| Discretize model by taking the value |
| at the center of the bin. |
| * 'linear_interp' |
| Discretize model by performing a bilinear interpolation |
| between the values at the corners of the bin. |
| * 'oversample' |
| Discretize model by taking the average |
| on an oversampled grid. |
| * 'integrate' |
| Discretize model by integrating the |
| model over the bin. |
| factor : number, optional |
| Factor of oversampling. Default factor = 10. |
| |
| Raises |
| ------ |
| TypeError |
| If model is not an instance of `~astropy.modeling.Fittable2DModel` |
| |
| See also |
| -------- |
| Model1DKernel : Create kernel from `~astropy.modeling.Fittable1DModel` |
| CustomKernel : Create kernel from list or array |
| |
| Examples |
| -------- |
| Define a Gaussian2D model: |
| |
| >>> from astropy.modeling.models import Gaussian2D |
| >>> from astropy.convolution.kernels import Model2DKernel |
| >>> gauss = Gaussian2D(1, 0, 0, 2, 2) |
| |
| And create a custom two dimensional kernel from it: |
| |
| >>> gauss_kernel = Model2DKernel(gauss, x_size=9) |
| |
| This kernel can now be used like a usual astropy kernel. |
| |
| """ |
| _is_bool = False |
| _separable = False |
|
|
| def __init__(self, model, **kwargs): |
| self._separable = False |
| if isinstance(model, Fittable2DModel): |
| self._model = model |
| else: |
| raise TypeError("Must be Fittable2DModel") |
| super().__init__(**kwargs) |
|
|
|
|
| class PSFKernel(Kernel2D): |
| """ |
| Initialize filter kernel from astropy PSF instance. |
| """ |
| _separable = False |
|
|
| def __init__(self): |
| raise NotImplementedError('Not yet implemented') |
|
|
|
|
| class CustomKernel(Kernel): |
| """ |
| Create filter kernel from list or array. |
| |
| Parameters |
| ---------- |
| array : list or array |
| Filter kernel array. Size must be odd. |
| |
| Raises |
| ------ |
| TypeError |
| If array is not a list or array. |
| KernelSizeError |
| If array size is even. |
| |
| See also |
| -------- |
| Model2DKernel, Model1DKernel |
| |
| Examples |
| -------- |
| Define one dimensional array: |
| |
| >>> from astropy.convolution.kernels import CustomKernel |
| >>> import numpy as np |
| >>> array = np.array([1, 2, 3, 2, 1]) |
| >>> kernel = CustomKernel(array) |
| >>> kernel.dimension |
| 1 |
| |
| Define two dimensional array: |
| |
| >>> array = np.array([[1, 1, 1], [1, 2, 1], [1, 1, 1]]) |
| >>> kernel = CustomKernel(array) |
| >>> kernel.dimension |
| 2 |
| """ |
| def __init__(self, array): |
| self.array = array |
| super().__init__(self._array) |
|
|
| @property |
| def array(self): |
| """ |
| Filter kernel array. |
| """ |
| return self._array |
|
|
| @array.setter |
| def array(self, array): |
| """ |
| Filter kernel array setter |
| """ |
| if isinstance(array, np.ndarray): |
| self._array = array.astype(np.float64) |
| elif isinstance(array, list): |
| self._array = np.array(array, dtype=np.float64) |
| else: |
| raise TypeError("Must be list or array.") |
|
|
| |
| if has_even_axis(self): |
| raise_even_kernel_exception() |
|
|
| |
| ones = self._array == 1. |
| zeros = self._array == 0 |
| self._is_bool = bool(np.all(np.logical_or(ones, zeros))) |
|
|
| self._truncation = 0.0 |
|
|