| import abc |
|
|
| from collections import OrderedDict |
|
|
| import pytest |
| import numpy as np |
|
|
| from astropy.utils.metadata import MetaData, MergeConflictError, merge, enable_merge_strategies |
| from astropy.utils.metadata import common_dtype |
| from astropy.utils import metadata |
| from astropy.io import fits |
|
|
|
|
| class OrderedDictSubclass(OrderedDict): |
| pass |
|
|
|
|
| class MetaBaseTest: |
|
|
| __metaclass__ = abc.ABCMeta |
|
|
| def test_none(self): |
| d = self.test_class(*self.args) |
| assert isinstance(d.meta, OrderedDict) |
| assert len(d.meta) == 0 |
|
|
| @pytest.mark.parametrize(('meta'), ([dict([('a', 1)]), |
| OrderedDict([('a', 1)]), |
| OrderedDictSubclass([('a', 1)])])) |
| def test_mapping_init(self, meta): |
| d = self.test_class(*self.args, meta=meta) |
| assert type(d.meta) == type(meta) |
| assert d.meta['a'] == 1 |
|
|
| @pytest.mark.parametrize(('meta'), (["ceci n'est pas un meta", 1.2, [1, 2, 3]])) |
| def test_non_mapping_init(self, meta): |
| with pytest.raises(TypeError): |
| self.test_class(*self.args, meta=meta) |
|
|
| @pytest.mark.parametrize(('meta'), ([dict([('a', 1)]), |
| OrderedDict([('a', 1)]), |
| OrderedDictSubclass([('a', 1)])])) |
| def test_mapping_set(self, meta): |
| d = self.test_class(*self.args, meta=meta) |
| assert type(d.meta) == type(meta) |
| assert d.meta['a'] == 1 |
|
|
| @pytest.mark.parametrize(('meta'), (["ceci n'est pas un meta", 1.2, [1, 2, 3]])) |
| def test_non_mapping_set(self, meta): |
| with pytest.raises(TypeError): |
| d = self.test_class(*self.args, meta=meta) |
|
|
| def test_meta_fits_header(self): |
|
|
| header = fits.header.Header() |
| header.set('observer', 'Edwin Hubble') |
| header.set('exptime', '3600') |
|
|
| d = self.test_class(*self.args, meta=header) |
|
|
| assert d.meta['OBSERVER'] == 'Edwin Hubble' |
|
|
|
|
| class ExampleData: |
| meta = MetaData() |
|
|
| def __init__(self, meta=None): |
| self.meta = meta |
|
|
|
|
| class TestMetaExampleData(MetaBaseTest): |
| test_class = ExampleData |
| args = () |
|
|
|
|
| def test_metadata_merging_conflict_exception(): |
| """Regression test for issue #3294. |
| |
| Ensure that an exception is raised when a metadata conflict exists |
| and ``metadata_conflicts='error'`` has been set. |
| """ |
| data1 = ExampleData() |
| data2 = ExampleData() |
| data1.meta['somekey'] = {'x': 1, 'y': 1} |
| data2.meta['somekey'] = {'x': 1, 'y': 999} |
| with pytest.raises(MergeConflictError): |
| merge(data1.meta, data2.meta, metadata_conflicts='error') |
|
|
|
|
| def test_metadata_merging(): |
| |
| meta1 = {'k1': {'k1': [1, 2], |
| 'k2': 2}, |
| 'k2': 2, |
| 'k4': (1, 2)} |
| meta2 = {'k1': {'k1': [3]}, |
| 'k3': 3, |
| 'k4': (3,)} |
| out = merge(meta1, meta2, metadata_conflicts='error') |
| assert out == {'k1': {'k2': 2, |
| 'k1': [1, 2, 3]}, |
| 'k2': 2, |
| 'k3': 3, |
| 'k4': (1, 2, 3)} |
|
|
| |
| meta1 = {'k1': np.array([1, 2])} |
| meta2 = {'k1': np.array([3])} |
| out = merge(meta1, meta2, metadata_conflicts='error') |
| assert np.all(out['k1'] == np.array([1, 2, 3])) |
|
|
| |
| meta1 = {'k1': [1, 2]} |
| meta2 = {'k1': np.array([3])} |
| assert np.all(out['k1'] == np.array([1, 2, 3])) |
|
|
| |
| meta1 = {'k1': 1} |
| meta2 = {'k1': 2} |
| with pytest.raises(MergeConflictError): |
| merge(meta1, meta2, metadata_conflicts='error') |
|
|
| |
| meta1 = {'k1': np.array([1, 2])} |
| meta2 = {'k1': np.array([[3]])} |
| with pytest.raises(MergeConflictError): |
| merge(meta1, meta2, metadata_conflicts='error') |
|
|
| |
| meta1 = {'k1': np.array([1, 2])} |
| meta2 = {'k1': np.array(['3'])} |
| with pytest.raises(MergeConflictError): |
| merge(meta1, meta2, metadata_conflicts='error') |
|
|
| |
| meta1 = {'k1': np.array([1, 2])} |
| meta2 = {'k1': np.array(['3'])} |
| out = merge(meta1, meta2, metadata_conflicts='silent') |
| assert np.all(out['k1'] == np.array(['3'])) |
|
|
|
|
| def test_metadata_merging_new_strategy(): |
| original_merge_strategies = list(metadata.MERGE_STRATEGIES) |
|
|
| class MergeNumbersAsList(metadata.MergeStrategy): |
| """ |
| Scalar float or int values are joined in a list. |
| """ |
| types = ((int, float), (int, float)) |
|
|
| @classmethod |
| def merge(cls, left, right): |
| return [left, right] |
|
|
| class MergeConcatStrings(metadata.MergePlus): |
| """ |
| Scalar string values are concatenated |
| """ |
| types = (str, str) |
| enabled = False |
|
|
| |
| meta1 = {'k1': 1, 'k2': 'a'} |
| meta2 = {'k1': 2, 'k2': 'b'} |
|
|
| |
| with enable_merge_strategies(MergeNumbersAsList, MergeConcatStrings): |
| assert MergeNumbersAsList.enabled |
| assert MergeConcatStrings.enabled |
| out = merge(meta1, meta2, metadata_conflicts='error') |
| assert out['k1'] == [1, 2] |
| assert out['k2'] == 'ab' |
| assert not MergeNumbersAsList.enabled |
| assert not MergeConcatStrings.enabled |
|
|
| |
| with pytest.raises(MergeConflictError): |
| merge(meta1, meta2, metadata_conflicts='error') |
|
|
| |
| with enable_merge_strategies(metadata.MergeStrategy): |
| assert MergeNumbersAsList.enabled |
| assert MergeConcatStrings.enabled |
| out = merge(meta1, meta2, metadata_conflicts='error') |
| assert out['k1'] == [1, 2] |
| assert out['k2'] == 'ab' |
| assert not MergeNumbersAsList.enabled |
| assert not MergeConcatStrings.enabled |
|
|
| metadata.MERGE_STRATEGIES = original_merge_strategies |
|
|
|
|
| def test_common_dtype_string(): |
| u3 = np.array([u'123']) |
| u4 = np.array([u'1234']) |
| b3 = np.array([b'123']) |
| b5 = np.array([b'12345']) |
| assert common_dtype([u3, u4]).endswith('U4') |
| assert common_dtype([b5, u4]).endswith('U5') |
| assert common_dtype([b3, b5]).endswith('S5') |
|
|
|
|
| def test_common_dtype_basic(): |
| i8 = np.array(1, dtype=np.int64) |
| f8 = np.array(1, dtype=np.float64) |
| u3 = np.array(u'123') |
|
|
| with pytest.raises(MergeConflictError): |
| common_dtype([i8, u3]) |
|
|
| assert common_dtype([i8, i8]).endswith('i8') |
| assert common_dtype([i8, f8]).endswith('f8') |
|
|