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| | from __future__ import absolute_import |
| |
|
| | import io |
| | import json |
| | import os |
| |
|
| | import numpy as np |
| | import pytest |
| | import scipy.sparse |
| |
|
| | from sagemaker.serializers import ( |
| | CSVSerializer, |
| | NumpySerializer, |
| | JSONSerializer, |
| | IdentitySerializer, |
| | SparseMatrixSerializer, |
| | JSONLinesSerializer, |
| | LibSVMSerializer, |
| | DataSerializer, |
| | ) |
| | from tests.unit import DATA_DIR |
| |
|
| |
|
| | @pytest.fixture |
| | def csv_serializer(): |
| | return CSVSerializer() |
| |
|
| |
|
| | def test_csv_serializer_str(csv_serializer): |
| | original = "1,2,3" |
| | result = csv_serializer.serialize("1,2,3") |
| |
|
| | assert result == original |
| |
|
| |
|
| | def test_csv_serializer_python_array(csv_serializer): |
| | result = csv_serializer.serialize([1, 2, 3]) |
| |
|
| | assert result == "1,2,3" |
| |
|
| |
|
| | def test_csv_serializer_numpy_valid(csv_serializer): |
| | result = csv_serializer.serialize(np.array([1, 2, 3])) |
| |
|
| | assert result == "1,2,3" |
| |
|
| |
|
| | def test_csv_serializer_numpy_valid_2dimensional(csv_serializer): |
| | result = csv_serializer.serialize(np.array([[1, 2, 3], [3, 4, 5]])) |
| |
|
| | assert result == "1,2,3\n3,4,5" |
| |
|
| |
|
| | def test_csv_serializer_list_of_str(csv_serializer): |
| | result = csv_serializer.serialize(["1,2,3", "4,5,6"]) |
| |
|
| | assert result == "1,2,3\n4,5,6" |
| |
|
| |
|
| | def test_csv_serializer_list_of_list(csv_serializer): |
| | result = csv_serializer.serialize([[1, 2, 3], [3, 4, 5]]) |
| |
|
| | assert result == "1,2,3\n3,4,5" |
| |
|
| |
|
| | def test_csv_serializer_list_of_empty(csv_serializer): |
| | with pytest.raises(ValueError) as invalid_input: |
| | csv_serializer.serialize(np.array([[], []])) |
| |
|
| | assert "empty array" in str(invalid_input) |
| |
|
| |
|
| | def test_csv_serializer_numpy_invalid_empty(csv_serializer): |
| | with pytest.raises(ValueError) as invalid_input: |
| | csv_serializer.serialize(np.array([])) |
| |
|
| | assert "empty array" in str(invalid_input) |
| |
|
| |
|
| | def test_csv_serializer_python_invalid_empty(csv_serializer): |
| | with pytest.raises(ValueError) as error: |
| | csv_serializer.serialize([]) |
| | assert "empty array" in str(error) |
| |
|
| |
|
| | def test_csv_serializer_csv_reader(csv_serializer): |
| | csv_file_path = os.path.join(DATA_DIR, "with_integers.csv") |
| | with open(csv_file_path) as csv_file: |
| | validation_data = csv_file.read() |
| | csv_file.seek(0) |
| | result = csv_serializer.serialize(csv_file) |
| | assert result == validation_data |
| |
|
| |
|
| | @pytest.fixture |
| | def numpy_serializer(): |
| | return NumpySerializer() |
| |
|
| |
|
| | def test_numpy_serializer_python_array(numpy_serializer): |
| | array = [1, 2, 3] |
| | result = numpy_serializer.serialize(array) |
| |
|
| | assert np.array_equal(array, np.load(io.BytesIO(result))) |
| |
|
| |
|
| | def test_numpy_serializer_python_array_with_dtype(): |
| | numpy_serializer = NumpySerializer(dtype="float16") |
| | array = [1, 2, 3] |
| |
|
| | result = numpy_serializer.serialize(array) |
| |
|
| | deserialized = np.load(io.BytesIO(result)) |
| | assert np.array_equal(array, deserialized) |
| | assert deserialized.dtype == "float16" |
| |
|
| |
|
| | def test_numpy_serializer_numpy_valid_2_dimensional(numpy_serializer): |
| | array = np.array([[1, 2, 3], [3, 4, 5]]) |
| | result = numpy_serializer.serialize(array) |
| |
|
| | assert np.array_equal(array, np.load(io.BytesIO(result))) |
| |
|
| |
|
| | def test_numpy_serializer_numpy_valid_multidimensional(numpy_serializer): |
| | array = np.ones((10, 10, 10, 10)) |
| | result = numpy_serializer.serialize(array) |
| |
|
| | assert np.array_equal(array, np.load(io.BytesIO(result))) |
| |
|
| |
|
| | def test_numpy_serializer_numpy_valid_list_of_strings(numpy_serializer): |
| | array = np.array(["one", "two", "three"]) |
| | result = numpy_serializer.serialize(array) |
| |
|
| | assert np.array_equal(array, np.load(io.BytesIO(result))) |
| |
|
| |
|
| | def test_numpy_serializer_from_buffer_or_file(numpy_serializer): |
| | array = np.ones((2, 3)) |
| | stream = io.BytesIO() |
| | np.save(stream, array) |
| | stream.seek(0) |
| |
|
| | result = numpy_serializer.serialize(stream) |
| |
|
| | assert np.array_equal(array, np.load(io.BytesIO(result))) |
| |
|
| |
|
| | def test_numpy_serializer_object(numpy_serializer): |
| | object = {1, 2, 3} |
| |
|
| | result = numpy_serializer.serialize(object) |
| |
|
| | assert np.array_equal(np.array(object), np.load(io.BytesIO(result), allow_pickle=True)) |
| |
|
| |
|
| | def test_numpy_serializer_list_of_empty(numpy_serializer): |
| | with pytest.raises(ValueError) as invalid_input: |
| | numpy_serializer.serialize(np.array([[], []])) |
| |
|
| | assert "empty array" in str(invalid_input) |
| |
|
| |
|
| | def test_numpy_serializer_numpy_invalid_empty(numpy_serializer): |
| | with pytest.raises(ValueError) as invalid_input: |
| | numpy_serializer.serialize(np.array([])) |
| |
|
| | assert "empty array" in str(invalid_input) |
| |
|
| |
|
| | def test_numpy_serializer_python_invalid_empty(numpy_serializer): |
| | with pytest.raises(ValueError) as error: |
| | numpy_serializer.serialize([]) |
| | assert "empty array" in str(error) |
| |
|
| |
|
| | @pytest.fixture |
| | def json_serializer(): |
| | return JSONSerializer() |
| |
|
| |
|
| | def test_json_serializer_numpy_valid(json_serializer): |
| | result = json_serializer.serialize(np.array([1, 2, 3])) |
| |
|
| | assert result == "[1, 2, 3]" |
| |
|
| |
|
| | def test_json_serializer_numpy_valid_2dimensional(json_serializer): |
| | result = json_serializer.serialize(np.array([[1, 2, 3], [3, 4, 5]])) |
| |
|
| | assert result == "[[1, 2, 3], [3, 4, 5]]" |
| |
|
| |
|
| | def test_json_serializer_empty(json_serializer): |
| | assert json_serializer.serialize(np.array([])) == "[]" |
| |
|
| |
|
| | def test_json_serializer_python_array(json_serializer): |
| | result = json_serializer.serialize([1, 2, 3]) |
| |
|
| | assert result == "[1, 2, 3]" |
| |
|
| |
|
| | def test_json_serializer_python_dictionary(json_serializer): |
| | d = {"gender": "m", "age": 22, "city": "Paris"} |
| |
|
| | result = json_serializer.serialize(d) |
| |
|
| | assert json.loads(result) == d |
| |
|
| |
|
| | def test_json_serializer_python_invalid_empty(json_serializer): |
| | assert json_serializer.serialize([]) == "[]" |
| |
|
| |
|
| | def test_json_serializer_python_dictionary_invalid_empty(json_serializer): |
| | assert json_serializer.serialize({}) == "{}" |
| |
|
| |
|
| | def test_json_serializer_csv_buffer(json_serializer): |
| | csv_file_path = os.path.join(DATA_DIR, "with_integers.csv") |
| | with open(csv_file_path) as csv_file: |
| | validation_value = csv_file.read() |
| | csv_file.seek(0) |
| | result = json_serializer.serialize(csv_file) |
| | assert result == validation_value |
| |
|
| |
|
| | def test_identity_serializer(): |
| | identity_serializer = IdentitySerializer() |
| | assert identity_serializer.serialize(b"{}") == b"{}" |
| |
|
| |
|
| | def test_identity_serializer_with_custom_content_type(): |
| | identity_serializer = IdentitySerializer(content_type="text/csv") |
| | assert identity_serializer.serialize(b"a,b\n1,2") == b"a,b\n1,2" |
| | assert identity_serializer.CONTENT_TYPE == "text/csv" |
| |
|
| |
|
| | @pytest.fixture |
| | def json_lines_serializer(): |
| | return JSONLinesSerializer() |
| |
|
| |
|
| | @pytest.mark.parametrize( |
| | "input, expected", |
| | [ |
| | ('["Name", "Score"]\n["Gilbert", 24]', '["Name", "Score"]\n["Gilbert", 24]'), |
| | ( |
| | '{"Name": "Gilbert", "Score": 24}\n{"Name": "Alexa", "Score": 29}', |
| | '{"Name": "Gilbert", "Score": 24}\n{"Name": "Alexa", "Score": 29}', |
| | ), |
| | ], |
| | ) |
| | def test_json_lines_serializer_string(json_lines_serializer, input, expected): |
| | actual = json_lines_serializer.serialize(input) |
| | assert actual == expected |
| |
|
| |
|
| | @pytest.mark.parametrize( |
| | "input, expected", |
| | [ |
| | ([["Name", "Score"], ["Gilbert", 24]], '["Name", "Score"]\n["Gilbert", 24]'), |
| | ( |
| | [{"Name": "Gilbert", "Score": 24}, {"Name": "Alexa", "Score": 29}], |
| | '{"Name": "Gilbert", "Score": 24}\n{"Name": "Alexa", "Score": 29}', |
| | ), |
| | ], |
| | ) |
| | def test_json_lines_serializer_list(json_lines_serializer, input, expected): |
| | actual = json_lines_serializer.serialize(input) |
| | assert actual == expected |
| |
|
| |
|
| | @pytest.mark.parametrize( |
| | "source, expected", |
| | [ |
| | ('["Name", "Score"]\n["Gilbert", 24]', '["Name", "Score"]\n["Gilbert", 24]'), |
| | ( |
| | '{"Name": "Gilbert", "Score": 24}\n{"Name": "Alexa", "Score": 29}', |
| | '{"Name": "Gilbert", "Score": 24}\n{"Name": "Alexa", "Score": 29}', |
| | ), |
| | ], |
| | ) |
| | def test_json_lines_serializer_file_like(json_lines_serializer, source, expected): |
| | input = io.StringIO(source) |
| | actual = json_lines_serializer.serialize(input) |
| | assert actual == expected |
| |
|
| |
|
| | @pytest.fixture |
| | def sparse_matrix_serializer(): |
| | return SparseMatrixSerializer() |
| |
|
| |
|
| | def test_sparse_matrix_serializer(sparse_matrix_serializer): |
| | data = scipy.sparse.csc_matrix(np.array([[0, 0, 3], [4, 0, 0]])) |
| | stream = io.BytesIO(sparse_matrix_serializer.serialize(data)) |
| | result = scipy.sparse.load_npz(stream).toarray() |
| | expected = data.toarray() |
| | assert np.array_equal(result, expected) |
| |
|
| |
|
| | @pytest.fixture |
| | def libsvm_serializer(): |
| | return LibSVMSerializer() |
| |
|
| |
|
| | def test_libsvm_serializer_str(libsvm_serializer): |
| | original = "0 0:1 5:1" |
| | result = libsvm_serializer.serialize("0 0:1 5:1") |
| | assert result == original |
| |
|
| |
|
| | def test_libsvm_serializer_file_like(libsvm_serializer): |
| | libsvm_file_path = os.path.join(DATA_DIR, "xgboost_abalone", "abalone") |
| | with open(libsvm_file_path) as libsvm_file: |
| | validation_data = libsvm_file.read() |
| | libsvm_file.seek(0) |
| | result = libsvm_serializer.serialize(libsvm_file) |
| | assert result == validation_data |
| |
|
| |
|
| | @pytest.fixture |
| | def data_serializer(): |
| | return DataSerializer() |
| |
|
| |
|
| | def test_data_serializer_raw(data_serializer): |
| | input_image_file_path = os.path.join(DATA_DIR, "", "cuteCat.jpg") |
| | with open(input_image_file_path, "rb") as image: |
| | input_image = image.read() |
| | input_image_data = data_serializer.serialize(input_image) |
| | validation_image_file_path = os.path.join(DATA_DIR, "", "cuteCat.raw") |
| | validation_image_data = open(validation_image_file_path, "rb").read() |
| | assert input_image_data == validation_image_data |
| |
|
| |
|
| | def test_data_serializer_file_like(data_serializer): |
| | input_image_file_path = os.path.join(DATA_DIR, "", "cuteCat.jpg") |
| | validation_image_file_path = os.path.join(DATA_DIR, "", "cuteCat.raw") |
| | input_image_data = data_serializer.serialize(input_image_file_path) |
| | validation_image_data = open(validation_image_file_path, "rb").read() |
| | assert input_image_data == validation_image_data |
| |
|