# Copyright 2020 MONAI Consortium # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # http://www.apache.org/licenses/LICENSE-2.0 # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. import unittest import numpy as np from monai.transforms import ( create_control_grid, create_grid, create_rotate, create_scale, create_shear, create_translate, ) class TestCreateGrid(unittest.TestCase): def test_create_grid(self): with self.assertRaisesRegex(TypeError, ""): create_grid(None) with self.assertRaisesRegex(TypeError, ""): create_grid((1, 1), spacing=2.0) with self.assertRaisesRegex(TypeError, ""): create_grid((1, 1), spacing=2.0) g = create_grid((1, 1)) expected = np.array([[[0.0]], [[0.0]], [[1.0]]]) np.testing.assert_allclose(g, expected) g = create_grid((1, 1), homogeneous=False) expected = np.array([[[0.0]], [[0.0]]]) np.testing.assert_allclose(g, expected) g = create_grid((1, 1), spacing=(1.2, 1.3)) expected = np.array([[[0.0]], [[0.0]], [[1.0]]]) np.testing.assert_allclose(g, expected) g = create_grid((1, 1, 1), spacing=(1.2, 1.3, 1.0)) expected = np.array([[[[0.0]]], [[[0.0]]], [[[0.0]]], [[[1.0]]]]) np.testing.assert_allclose(g, expected) g = create_grid((1, 1, 1), spacing=(1.2, 1.3, 1.0), homogeneous=False) expected = np.array([[[[0.0]]], [[[0.0]]], [[[0.0]]]]) np.testing.assert_allclose(g, expected) g = create_grid((1, 1, 1), spacing=(1.2, 1.3, 1.0), dtype=np.int32) np.testing.assert_equal(g.dtype, np.int32) g = create_grid((2, 2, 2)) expected = np.array( [ [[[-0.5, -0.5], [-0.5, -0.5]], [[0.5, 0.5], [0.5, 0.5]]], [[[-0.5, -0.5], [0.5, 0.5]], [[-0.5, -0.5], [0.5, 0.5]]], [[[-0.5, 0.5], [-0.5, 0.5]], [[-0.5, 0.5], [-0.5, 0.5]]], [[[1.0, 1.0], [1.0, 1.0]], [[1.0, 1.0], [1.0, 1.0]]], ] ) np.testing.assert_allclose(g, expected) g = create_grid((2, 2, 2), spacing=(1.2, 1.3, 1.0)) expected = np.array( [ [[[-0.6, -0.6], [-0.6, -0.6]], [[0.6, 0.6], [0.6, 0.6]]], [[[-0.65, -0.65], [0.65, 0.65]], [[-0.65, -0.65], [0.65, 0.65]]], [[[-0.5, 0.5], [-0.5, 0.5]], [[-0.5, 0.5], [-0.5, 0.5]]], [[[1.0, 1.0], [1.0, 1.0]], [[1.0, 1.0], [1.0, 1.0]]], ] ) np.testing.assert_allclose(g, expected) def test_create_control_grid(self): with self.assertRaisesRegex(TypeError, ""): create_control_grid(None, None) with self.assertRaisesRegex(TypeError, ""): create_control_grid((1, 1), 2.0) g = create_control_grid((1.0, 1.0), (1.0, 1.0)) expected = np.array( [ [[-1.0, -1.0, -1.0], [0.0, 0.0, 0.0], [1.0, 1.0, 1.0]], [[-1.0, 0.0, 1.0], [-1.0, 0.0, 1.0], [-1.0, 0.0, 1.0]], [[1.0, 1.0, 1.0], [1.0, 1.0, 1.0], [1.0, 1.0, 1.0]], ] ) np.testing.assert_allclose(g, expected) g = create_control_grid((1.0, 1.0), (2.0, 2.0)) expected = np.array( [ [[-2.0, -2.0, -2.0], [0.0, 0.0, 0.0], [2.0, 2.0, 2.0]], [[-2.0, 0.0, 2.0], [-2.0, 0.0, 2.0], [-2.0, 0.0, 2.0]], [[1.0, 1.0, 1.0], [1.0, 1.0, 1.0], [1.0, 1.0, 1.0]], ] ) np.testing.assert_allclose(g, expected) g = create_control_grid((2.0, 2.0), (1.0, 1.0)) expected = np.array( [ [[-1.5, -1.5, -1.5, -1.5], [-0.5, -0.5, -0.5, -0.5], [0.5, 0.5, 0.5, 0.5], [1.5, 1.5, 1.5, 1.5]], [[-1.5, -0.5, 0.5, 1.5], [-1.5, -0.5, 0.5, 1.5], [-1.5, -0.5, 0.5, 1.5], [-1.5, -0.5, 0.5, 1.5]], [[1.0, 1.0, 1.0, 1.0], [1.0, 1.0, 1.0, 1.0], [1.0, 1.0, 1.0, 1.0], [1.0, 1.0, 1.0, 1.0]], ] ) np.testing.assert_allclose(g, expected) g = create_control_grid((2.0, 2.0), (2.0, 2.0)) expected = np.array( [ [[-3.0, -3.0, -3.0, -3.0], [-1.0, -1.0, -1.0, -1.0], [1.0, 1.0, 1.0, 1.0], [3.0, 3.0, 3.0, 3.0]], [[-3.0, -1.0, 1.0, 3.0], [-3.0, -1.0, 1.0, 3.0], [-3.0, -1.0, 1.0, 3.0], [-3.0, -1.0, 1.0, 3.0]], [[1.0, 1.0, 1.0, 1.0], [1.0, 1.0, 1.0, 1.0], [1.0, 1.0, 1.0, 1.0], [1.0, 1.0, 1.0, 1.0]], ] ) np.testing.assert_allclose(g, expected) g = create_control_grid((1.0, 1.0, 1.0), (2.0, 2.0, 2.0), homogeneous=False) expected = np.array( [ [ [[-2.0, -2.0, -2.0], [-2.0, -2.0, -2.0], [-2.0, -2.0, -2.0]], [[0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0]], [[2.0, 2.0, 2.0], [2.0, 2.0, 2.0], [2.0, 2.0, 2.0]], ], [ [[-2.0, -2.0, -2.0], [0.0, 0.0, 0.0], [2.0, 2.0, 2.0]], [[-2.0, -2.0, -2.0], [0.0, 0.0, 0.0], [2.0, 2.0, 2.0]], [[-2.0, -2.0, -2.0], [0.0, 0.0, 0.0], [2.0, 2.0, 2.0]], ], [ [[-2.0, 0.0, 2.0], [-2.0, 0.0, 2.0], [-2.0, 0.0, 2.0]], [[-2.0, 0.0, 2.0], [-2.0, 0.0, 2.0], [-2.0, 0.0, 2.0]], [[-2.0, 0.0, 2.0], [-2.0, 0.0, 2.0], [-2.0, 0.0, 2.0]], ], ] ) np.testing.assert_allclose(g, expected) def test_assert(func, params, expected): m = func(*params) np.testing.assert_allclose(m, expected, atol=1e-7) class TestCreateAffine(unittest.TestCase): def test_create_rotate(self): with self.assertRaisesRegex(TypeError, ""): create_rotate(2, None) with self.assertRaisesRegex(ValueError, ""): create_rotate(5, 1) test_assert( create_rotate, (2, 1.1), np.array([[0.45359612, -0.89120736, 0.0], [0.89120736, 0.45359612, 0.0], [0.0, 0.0, 1.0]]), ) test_assert( create_rotate, (3, 1.1), np.array( [ [1.0, 0.0, 0.0, 0.0], [0.0, 0.45359612, -0.89120736, 0.0], [0.0, 0.89120736, 0.45359612, 0.0], [0.0, 0.0, 0.0, 1.0], ] ), ) test_assert( create_rotate, (3, (1.1, 1)), np.array( [ [0.54030231, 0.0, 0.84147098, 0.0], [0.74992513, 0.45359612, -0.48152139, 0.0], [-0.38168798, 0.89120736, 0.24507903, 0.0], [0.0, 0.0, 0.0, 1.0], ] ), ) test_assert( create_rotate, (3, (1, 1, 1.1)), np.array( [ [0.24507903, -0.48152139, 0.84147098, 0.0], [0.80270075, -0.38596121, -0.45464871, 0.0], [0.54369824, 0.78687425, 0.29192658, 0.0], [0.0, 0.0, 0.0, 1.0], ] ), ) test_assert( create_rotate, (3, (0, 0, np.pi / 2)), np.array([[0.0, -1.0, 0.0, 0.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]), ) def test_create_shear(self): test_assert(create_shear, (2, 1.0), np.array([[1.0, 1.0, 0.0], [0.0, 1.0, 0.0], [0.0, 0.0, 1.0]])) test_assert(create_shear, (2, (2.0, 3.0)), np.array([[1.0, 2.0, 0.0], [3.0, 1.0, 0.0], [0.0, 0.0, 1.0]])) test_assert( create_shear, (3, 1.0), np.array([[1.0, 1.0, 0.0, 0.0], [0.0, 1.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]), ) def test_create_scale(self): test_assert(create_scale, (2, 2), np.array([[2.0, 0.0, 0.0], [0.0, 1.0, 0.0], [0.0, 0.0, 1.0]])) test_assert(create_scale, (2, [2, 2, 2]), np.array([[2.0, 0.0, 0.0], [0.0, 2.0, 0.0], [0.0, 0.0, 1.0]])) test_assert( create_scale, (3, [1.5, 2.4]), np.array([[1.5, 0.0, 0.0, 0.0], [0.0, 2.4, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]), ) test_assert( create_scale, (3, 1.5), np.array([[1.5, 0.0, 0.0, 0.0], [0.0, 1.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]), ) test_assert( create_scale, (3, [1, 2, 3, 4, 5]), np.array([[1.0, 0.0, 0.0, 0.0], [0.0, 2.0, 0.0, 0.0], [0.0, 0.0, 3.0, 0.0], [0.0, 0.0, 0.0, 1.0]]), ) def test_create_translate(self): test_assert(create_translate, (2, 2), np.array([[1.0, 0.0, 2.0], [0.0, 1.0, 0.0], [0.0, 0.0, 1.0]])) test_assert(create_translate, (2, [2, 2, 2]), np.array([[1.0, 0.0, 2.0], [0.0, 1.0, 2.0], [0.0, 0.0, 1.0]])) test_assert( create_translate, (3, [1.5, 2.4]), np.array([[1.0, 0.0, 0.0, 1.5], [0.0, 1.0, 0.0, 2.4], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]), ) test_assert( create_translate, (3, 1.5), np.array([[1.0, 0.0, 0.0, 1.5], [0.0, 1.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]), ) test_assert( create_translate, (3, [1, 2, 3, 4, 5]), np.array([[1.0, 0.0, 0.0, 1.0], [0.0, 1.0, 0.0, 2.0], [0.0, 0.0, 1.0, 3.0], [0.0, 0.0, 0.0, 1.0]]), ) if __name__ == "__main__": unittest.main()