# vfs.py # # LICENSE # # The MIT License # # Copyright (c) 2020 TileDB, Inc. # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to deal # in the Software without restriction, including without limitation the rights # to use, copy, modify, merge, publish, distribute, sublicense, and/or sell # copies of the Software, and to permit persons to whom the Software is # furnished to do so, subject to the following conditions: # # The above copyright notice and this permission notice shall be included in # all copies or substantial portions of the Software. # # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR # IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, # FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE # AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER # LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN # THE SOFTWARE. # # DESCRIPTION # # Please see the TileDB documentation for more information: # https://docs.tiledb.com/main/how-to/virtual-filesystem # # This program explores the various TileDB VFS tools. # import os import struct import tiledb def path(p): return os.path.join(os.getcwd(), p) def dirs_files(): # Create TileDB VFS vfs = tiledb.VFS() # Create directory if not vfs.is_dir("dir_A"): vfs.create_dir(path("dir_A")) print("Created 'dir_A'") else: print("'dir_A' already exists") # Creating an (empty) file if not vfs.is_file("dir_A/file_A"): vfs.touch(path("dir_A/file_A")) print("Created empty file 'dir_A/file_A'") else: print("'dir_A/file_A' already exists") # Getting the file size print("Size of file 'dir_A/file_A': {}".format(vfs.file_size(path("dir_A/file_A")))) # Moving files (moving directories is similar) print("Moving file 'dir_A/file_A' to 'dir_A/file_B'") vfs.move_file(path("dir_A/file_A"), path("dir_A/file_B")) # Deleting files and directories print("Deleting 'dir_A/file_B' and 'dir_A'") vfs.remove_file(path("dir_A/file_B")) vfs.remove_dir(path("dir_A")) def write(): # Create TileDB VFS vfs = tiledb.VFS() # Write binary data with vfs.open("tiledb_vfs.bin", "wb") as f: f.write(struct.pack("f", 153.0)) f.write("abcd".encode("utf-8")) # Write binary data again - this will overwrite the previous file with vfs.open("tiledb_vfs.bin", "wb") as f: f.write(struct.pack("f", 153.1)) f.write("abcdef".encode("utf-8")) # Append binary data to existing file (this will NOT work on S3) with vfs.open("tiledb_vfs.bin", "ab") as f: f.write("ghijkl".encode("utf-8")) def read(): # Create TileDB VFS vfs = tiledb.VFS() # Read binary data with vfs.open("tiledb_vfs.bin", "rb") as f: # Read the first 4 bytes (bytes [0:4]) f1 = struct.unpack("f", f.read(4))[0] # Read the next 8 bytes (bytes [4:12]) s1 = bytes.decode(f.read(8), "utf-8") print(f"Binary read:\n{f1}\n{s1}") dirs_files() write() read()