# writing_dense_multiple.py # # LICENSE # # The MIT License # # Copyright (c) 2020 TileDB, Inc. # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to deal # in the Software without restriction, including without limitation the rights # to use, copy, modify, merge, publish, distribute, sublicense, and/or sell # copies of the Software, and to permit persons to whom the Software is # furnished to do so, subject to the following conditions: # # The above copyright notice and this permission notice shall be included in # all copies or substantial portions of the Software. # # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR # IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, # FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE # AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER # LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN # THE SOFTWARE. # # DESCRIPTION # # Please see the TileDB documentation for more information: # https://docs.tiledb.com/main/how-to/arrays/writing-arrays/writing-in-dense-subarrays # # When run, this program will create a simple 2D dense array, write some data # to it with two write queries, and read the entire array data back. # import numpy as np import tiledb # Name of the array to create. array_name = "writing_dense_multiple" def create_array(): # The array will be 4x4 with dimensions "rows" and "cols", with domain [1,4]. dom = tiledb.Domain( tiledb.Dim(name="rows", domain=(1, 4), tile=2, dtype=np.int32), tiledb.Dim(name="cols", domain=(1, 4), tile=2, dtype=np.int32), ) # The array will be dense with a single attribute "a" so each (i,j) cell can store an integer. schema = tiledb.ArraySchema( domain=dom, sparse=False, attrs=[tiledb.Attr(name="a", dtype=np.int32)] ) # Create the (empty) array on disk. tiledb.DenseArray.create(array_name, schema) def write_array(): # Open the array and write to it. with tiledb.DenseArray(array_name, mode="w") as A: # First write data = np.array(([1, 2], [3, 4])) A[1:3, 1:3] = data # Second write data = np.array(([5, 6, 7, 8], [9, 10, 11, 12])) A[2:4, 1:5] = data def read_array(): # Open the array and read from it. with tiledb.DenseArray(array_name, mode="r") as A: # Slice the entire array data = A[:] print(data["a"]) if tiledb.object_type(array_name) != "array": create_array() write_array() read_array()