import ctypes import os import sys # un-comment this section to fix Cython backtrace line-numbers in # IPython/Jupyter. see https://bugs.python.org/issue32797#msg323167 # --- # try: # from importlib.machinery import ExtensionFileLoader # else: # del ExtensionFileLoader.get_source # --- if os.name == "posix": if sys.platform == "darwin": lib_name = "libtiledb.dylib" else: lib_name = "libtiledb.so" else: lib_name = "tiledb" from tiledb.libtiledb import version as libtiledb_version if libtiledb_version()[0] == 2 and libtiledb_version()[1] >= 25: from .current_domain import CurrentDomain from .ndrectangle import NDRectangle del libtiledb_version # no longer needed from .array_schema import ArraySchema from .attribute import Attr from .cc import TileDBError from .consolidation_plan import ConsolidationPlan from .ctx import Config, Ctx, default_ctx, scope_ctx from .dataframe_ import from_csv, from_pandas, open_dataframe from .dense_array import DenseArrayImpl from .dimension import Dim from .dimension_label import DimLabel from .dimension_label_schema import DimLabelSchema from .domain import Domain from .enumeration import Enumeration from .filestore import Filestore from .filter import ( BitShuffleFilter, BitWidthReductionFilter, ByteShuffleFilter, Bzip2Filter, ChecksumMD5Filter, ChecksumSHA256Filter, CompressionFilter, DeltaFilter, DictionaryFilter, DoubleDeltaFilter, Filter, FilterList, FloatScaleFilter, GzipFilter, LZ4Filter, NoOpFilter, PositiveDeltaFilter, RleFilter, WebpFilter, XORFilter, ZstdFilter, ) from .fragment import ( FragmentInfo, FragmentInfoList, copy_fragments_to_existing_array, create_array_from_fragments, ) from .group import Group from .highlevel import ( array_exists, array_fragments, as_built, consolidate, empty_like, from_numpy, ls, move, object_type, open, remove, save, schema_like, vacuum, walk, ) from .libtiledb import ( Array, Ctx, ) from .multirange_indexing import EmptyRange from .object import Object from .parquet_ import from_parquet from .query import Query from .query_condition import QueryCondition from .schema_evolution import ArraySchemaEvolution from .sparse_array import SparseArrayImpl from .stats import ( stats_disable, stats_dump, stats_enable, stats_reset, ) from .subarray import Subarray from .version_helper import version from .vfs import VFS, FileIO __version__ = version.version group_create = Group.create # Note: we use a modified namespace packaging to allow continuity of existing TileDB-Py imports. # Therefore, 'tiledb/__init__.py' must *only* exist in this package. # Furthermore, in sub-packages, the `find_packages` helper will not work at the # root directory due to lack of 'tiledb/__init__.py'. Sub-package 'setup.py' scripts # must declare constituents accordingly, such as by running 'find_packages' on a sub-directory # and applying prefixes accordingly. # 1) https://packaging.python.org/guides/packaging-namespace-packages/#native-namespace-packages # 2) https://stackoverflow.com/a/53486554 # # Note: 'pip -e' in particular will not work without this declaration: __path__ = __import__("pkgutil").extend_path(__path__, __name__) # If tiledb.cloud is installed, add CloudArray methods to TileDB arrays try: from tiledb.cloud.cloudarray import CloudArray except ImportError: class DenseArray(DenseArrayImpl): pass class SparseArray(SparseArrayImpl): pass else: class DenseArray(DenseArrayImpl, CloudArray): pass class SparseArray(SparseArrayImpl, CloudArray): pass del CloudArray