#include #include #include #include #include #define TILEDB_DEPRECATED #define TILEDB_DEPRECATED_EXPORT #include "../util.h" #include // C++ #include // C #if !defined(NDEBUG) // #include "debug.cc" #endif namespace tiledbpy { using namespace std; using namespace tiledb; namespace py = pybind11; using namespace pybind11::literals; class PySerializationTest { public: static py::bytes create_serialized_test_query(py::object pyctx, py::object pyarray) { int rc; tiledb_ctx_t *ctx; tiledb_array_t *array; ctx = (py::capsule)pyctx.attr("__capsule__")(); if (ctx == nullptr) TPY_ERROR_LOC("Invalid context pointer."); tiledb_ctx_alloc(NULL, &ctx); array = (py::capsule)pyarray.attr("__capsule__")(); if (array == nullptr) TPY_ERROR_LOC("Invalid array pointer."); uint32_t subarray_v[] = {3, 7}; int64_t data[5]; uint64_t data_size = sizeof(data); tiledb_subarray_t *subarray; tiledb_subarray_alloc(ctx, array, &subarray); tiledb_subarray_set_subarray(ctx, subarray, &subarray_v); tiledb_query_t *query; tiledb_query_alloc(ctx, array, TILEDB_READ, &query); tiledb_query_set_subarray_t(ctx, query, subarray); tiledb_query_set_layout(ctx, query, TILEDB_UNORDERED); tiledb_query_set_data_buffer(ctx, query, "", data, &data_size); tiledb_buffer_list_t *buff_list; tiledb_buffer_t *buff; rc = tiledb_serialize_query(ctx, query, TILEDB_CAPNP, 1, &buff_list); if (rc == TILEDB_ERR) TPY_ERROR_LOC("Could not serialize the query."); rc = tiledb_buffer_list_flatten(ctx, buff_list, &buff); if (rc == TILEDB_ERR) TPY_ERROR_LOC("Could not flatten the buffer list."); void *buff_data; uint64_t buff_num_bytes; rc = tiledb_buffer_get_data(ctx, buff, &buff_data, &buff_num_bytes); if (rc == TILEDB_ERR) TPY_ERROR_LOC("Could not get the data from the buffer."); py::bytes output((char *)buff_data, buff_num_bytes); tiledb_buffer_free(&buff); tiledb_buffer_list_free(&buff_list); tiledb_subarray_free(&subarray); tiledb_query_free(&query); return output; } }; void init_test_serialization(py::module &m) { py::class_(m, "test_serialization") .def_static("create_serialized_test_query", &PySerializationTest::create_serialized_test_query); } }; // namespace tiledbpy