Datasets:
Update README.md
Browse files
README.md
CHANGED
|
@@ -15,4 +15,46 @@ pretty_name: CBIS-DDSM-R
|
|
| 15 |
|
| 16 |
# CBIS-DDSM-R: A Curated Radiomic Feature Dataset for Breast Cancer Classification
|
| 17 |
|
| 18 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 15 |
|
| 16 |
# CBIS-DDSM-R: A Curated Radiomic Feature Dataset for Breast Cancer Classification
|
| 17 |
|
| 18 |
+
## Dataset Summary
|
| 19 |
+
CBIS-DDSM-R is an open-source, radiomics-ready extension of the Curated Breast Imaging Subset of the Digital Database for Screening Mammography (CBIS-DDSM). It is designed to facilitate reproducible radiomics and quantitative imaging research in breast cancer analysis.
|
| 20 |
+
The dataset provides a standardized preprocessing pipeline for mammograms and includes IBSI-compliant radiomics features extracted using PyRadiomics. Clinical metadata and radiomics features are combined into a unified, machine-readable format, making CBIS-DDSM-R a robust benchmark for developing and validating radiomics-based breast cancer models.
|
| 21 |
+
|
| 22 |
+
## Key Features
|
| 23 |
+
- Standardized mammogram preprocessing pipeline
|
| 24 |
+
- 93 radiomics features per lesion, extracted with PyRadiomics
|
| 25 |
+
- Full compliance with Image Biomarker Standardisation Initiative (IBSI) guidelines
|
| 26 |
+
- Unified dataset combining clinical metadata and radiomics features
|
| 27 |
+
- Designed for reproducibility and benchmarking in breast cancer radiomics
|
| 28 |
+
## Supported Tasks
|
| 29 |
+
- Breast cancer characterization
|
| 30 |
+
- Radiomics-based risk assessment
|
| 31 |
+
- Feature selection and reproducibility studies
|
| 32 |
+
- Benchmarking CAD and machine learning models
|
| 33 |
+
## Dataset Structure
|
| 34 |
+
The dataset is organized to support straightforward machine learning workflows:
|
| 35 |
+
- Radiomics features stored in tabular format
|
| 36 |
+
- Clinical and annotation metadata aligned at the lesion level
|
| 37 |
+
- Clear identifiers linking features to mammographic views and cases
|
| 38 |
+
## Intended Use
|
| 39 |
+
CBIS-DDSM-R is intended for research and educational purposes, particularly for:
|
| 40 |
+
- Radiomics and quantitative imaging studies
|
| 41 |
+
- Development and validation of machine learning models
|
| 42 |
+
- Reproducible research in medical imaging
|
| 43 |
+
## Citation
|
| 44 |
+
If you use this dataset, please cite the following paper.
|
| 45 |
+
```bibtex
|
| 46 |
+
|
| 47 |
+
@Article{data10110179,
|
| 48 |
+
AUTHOR = {Sánchez-Femat, Erika and Galván-Tejada, Carlos E. and Galván-Tejada, Jorge I. and Gamboa-Rosales, Hamurabi and Luna-García, Huizilopoztli and Flores-Chaires, Luis Alberto and Saldívar-Pérez, Javier and Reveles-Martínez, Rafael and Celaya-Padilla, José M.},
|
| 49 |
+
TITLE = {CBIS-DDSM-R: A Curated Radiomic Feature Dataset for Breast Cancer Classification},
|
| 50 |
+
JOURNAL = {Data},
|
| 51 |
+
VOLUME = {10},
|
| 52 |
+
YEAR = {2025},
|
| 53 |
+
NUMBER = {11},
|
| 54 |
+
ARTICLE-NUMBER = {179},
|
| 55 |
+
URL = {https://www.mdpi.com/2306-5729/10/11/179},
|
| 56 |
+
ISSN = {2306-5729},
|
| 57 |
+
ABSTRACT = {Early and accurate breast cancer detection is critical for patient outcomes. The Curated Breast Imaging Subset of the Digital Database for Screening Mammography (CBIS-DDSM) has been instrumental for computer-aided diagnosis (CAD) systems. However, the lack of a standardized preprocessing pipeline and consistent metadata has limited its utility for reproducible quantitative imaging or radiomics. This paper introduces CBIS-DDSM-R, an open-source, radiomics-ready extension of the original dataset. It provides an automated pipeline for preprocessing mammograms and extracts a standardized set of 93 radiomics features per lesion, adhering to Image Biomarker Standardisation Initiative (IBSI) guidelines using PyRadiomics. The resulting dataset combines clinical and radiomics data into a unified format, offering a robust benchmark for developing and validating reproducible radiomics models for breast cancer characterization.},
|
| 58 |
+
DOI = {10.3390/data10110179}
|
| 59 |
+
}
|
| 60 |
+
```
|