Checkpoint - 883 patients validated
Browse files
artifacts/1.3.6.1.4.1.14519.5.2.1.6279.6001.185226274332527104841463955058.png
ADDED
|
Git LFS Details
|
validation/validation_results.json
CHANGED
|
@@ -1,96 +1,96 @@
|
|
| 1 |
{
|
| 2 |
"method": "algorithmic_HU_threshold_morphology",
|
| 3 |
-
"n_patients":
|
| 4 |
"summary": {
|
| 5 |
"dice": {
|
| 6 |
-
"mean": 0.
|
| 7 |
-
"std": 0.
|
| 8 |
"min": 0.352285982954482,
|
| 9 |
"max": 0.9967457532665099,
|
| 10 |
-
"median": 0.
|
| 11 |
-
"ci95_lo": 0.
|
| 12 |
-
"ci95_hi": 0.
|
| 13 |
-
"n":
|
| 14 |
},
|
| 15 |
"iou": {
|
| 16 |
-
"mean": 0.
|
| 17 |
-
"std": 0.
|
| 18 |
"min": 0.21380286828304734,
|
| 19 |
"max": 0.9935126180744607,
|
| 20 |
-
"median": 0.
|
| 21 |
-
"ci95_lo": 0.
|
| 22 |
-
"ci95_hi": 0.
|
| 23 |
-
"n":
|
| 24 |
},
|
| 25 |
"f1": {
|
| 26 |
-
"mean": 0.
|
| 27 |
-
"std": 0.
|
| 28 |
"min": 0.352285982954482,
|
| 29 |
"max": 0.9967457532665099,
|
| 30 |
-
"median": 0.
|
| 31 |
-
"ci95_lo": 0.
|
| 32 |
-
"ci95_hi": 0.
|
| 33 |
-
"n":
|
| 34 |
},
|
| 35 |
"precision": {
|
| 36 |
-
"mean": 0.
|
| 37 |
-
"std": 0.
|
| 38 |
"min": 0.4935622697127371,
|
| 39 |
"max": 0.998398507911668,
|
| 40 |
-
"median": 0.
|
| 41 |
-
"ci95_lo": 0.
|
| 42 |
-
"ci95_hi": 0.
|
| 43 |
-
"n":
|
| 44 |
},
|
| 45 |
"recall": {
|
| 46 |
-
"mean": 0.
|
| 47 |
-
"std": 0.
|
| 48 |
"min": 0.2140477563259332,
|
| 49 |
"max": 0.9965764923473648,
|
| 50 |
-
"median": 0.
|
| 51 |
-
"ci95_lo": 0.
|
| 52 |
-
"ci95_hi": 0.
|
| 53 |
-
"n":
|
| 54 |
},
|
| 55 |
"sensitivity": {
|
| 56 |
-
"mean": 0.
|
| 57 |
-
"std": 0.
|
| 58 |
"min": 0.2140477563259332,
|
| 59 |
"max": 0.9965764923473648,
|
| 60 |
-
"median": 0.
|
| 61 |
-
"ci95_lo": 0.
|
| 62 |
-
"ci95_hi": 0.
|
| 63 |
-
"n":
|
| 64 |
},
|
| 65 |
"specificity": {
|
| 66 |
-
"mean": 0.
|
| 67 |
-
"std": 0.
|
| 68 |
"min": 0.9427512586157162,
|
| 69 |
"max": 0.999862877293183,
|
| 70 |
-
"median": 0.
|
| 71 |
-
"ci95_lo": 0.
|
| 72 |
-
"ci95_hi": 0.
|
| 73 |
-
"n":
|
| 74 |
},
|
| 75 |
"hd95": {
|
| 76 |
-
"mean": 3.
|
| 77 |
-
"std": 9.
|
| 78 |
"min": 1.0,
|
| 79 |
"max": 140.26047197981333,
|
| 80 |
"median": 1.4142135623730951,
|
| 81 |
-
"ci95_lo": 2.
|
| 82 |
-
"ci95_hi": 4.
|
| 83 |
-
"n":
|
| 84 |
},
|
| 85 |
"vol_error": {
|
| 86 |
-
"mean": 0.
|
| 87 |
-
"std": 0.
|
| 88 |
"min": 6.480638398430575e-06,
|
| 89 |
"max": 1.013798574273241,
|
| 90 |
-
"median": 0.
|
| 91 |
-
"ci95_lo": 0.
|
| 92 |
-
"ci95_hi": 0.
|
| 93 |
-
"n":
|
| 94 |
}
|
| 95 |
},
|
| 96 |
"per_patient": {
|
|
@@ -16096,6 +16096,26 @@
|
|
| 16096 |
"uid": "1.3.6.1.4.1.14519.5.2.1.6279.6001.398955972049286139436103068984",
|
| 16097 |
"subset": "subset3",
|
| 16098 |
"failure_case": true
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 16099 |
}
|
| 16100 |
}
|
| 16101 |
}
|
|
|
|
| 1 |
{
|
| 2 |
"method": "algorithmic_HU_threshold_morphology",
|
| 3 |
+
"n_patients": 883,
|
| 4 |
"summary": {
|
| 5 |
"dice": {
|
| 6 |
+
"mean": 0.9849394068692092,
|
| 7 |
+
"std": 0.03783702790898745,
|
| 8 |
"min": 0.352285982954482,
|
| 9 |
"max": 0.9967457532665099,
|
| 10 |
+
"median": 0.9892526198516294,
|
| 11 |
+
"ci95_lo": 0.982272036393936,
|
| 12 |
+
"ci95_hi": 0.9876067773444824,
|
| 13 |
+
"n": 774
|
| 14 |
},
|
| 15 |
"iou": {
|
| 16 |
+
"mean": 0.9721638794697582,
|
| 17 |
+
"std": 0.04960916962366318,
|
| 18 |
"min": 0.21380286828304734,
|
| 19 |
"max": 0.9935126180744607,
|
| 20 |
+
"median": 0.9787337956859494,
|
| 21 |
+
"ci95_lo": 0.9686666165590646,
|
| 22 |
+
"ci95_hi": 0.9756611423804519,
|
| 23 |
+
"n": 774
|
| 24 |
},
|
| 25 |
"f1": {
|
| 26 |
+
"mean": 0.9849394068692092,
|
| 27 |
+
"std": 0.03783702790898745,
|
| 28 |
"min": 0.352285982954482,
|
| 29 |
"max": 0.9967457532665099,
|
| 30 |
+
"median": 0.9892526198516294,
|
| 31 |
+
"ci95_lo": 0.982272036393936,
|
| 32 |
+
"ci95_hi": 0.9876067773444824,
|
| 33 |
+
"n": 774
|
| 34 |
},
|
| 35 |
"precision": {
|
| 36 |
+
"mean": 0.986994685562851,
|
| 37 |
+
"std": 0.02188385971211036,
|
| 38 |
"min": 0.4935622697127371,
|
| 39 |
"max": 0.998398507911668,
|
| 40 |
+
"median": 0.9902991297596176,
|
| 41 |
+
"ci95_lo": 0.9854519544207139,
|
| 42 |
+
"ci95_hi": 0.9885374167049881,
|
| 43 |
+
"n": 774
|
| 44 |
},
|
| 45 |
"recall": {
|
| 46 |
+
"mean": 0.9847961649848941,
|
| 47 |
+
"std": 0.04526566622146116,
|
| 48 |
"min": 0.2140477563259332,
|
| 49 |
"max": 0.9965764923473648,
|
| 50 |
+
"median": 0.9885888278250177,
|
| 51 |
+
"ci95_lo": 0.9816051029936318,
|
| 52 |
+
"ci95_hi": 0.9879872269761564,
|
| 53 |
+
"n": 774
|
| 54 |
},
|
| 55 |
"sensitivity": {
|
| 56 |
+
"mean": 0.9847961649848941,
|
| 57 |
+
"std": 0.04526566622146116,
|
| 58 |
"min": 0.2140477563259332,
|
| 59 |
"max": 0.9965764923473648,
|
| 60 |
+
"median": 0.9885888278250177,
|
| 61 |
+
"ci95_lo": 0.9816051029936318,
|
| 62 |
+
"ci95_hi": 0.9879872269761564,
|
| 63 |
+
"n": 774
|
| 64 |
},
|
| 65 |
"specificity": {
|
| 66 |
+
"mean": 0.998173857906091,
|
| 67 |
+
"std": 0.0027311497262754755,
|
| 68 |
"min": 0.9427512586157162,
|
| 69 |
"max": 0.999862877293183,
|
| 70 |
+
"median": 0.9986201384520877,
|
| 71 |
+
"ci95_lo": 0.9979813219553039,
|
| 72 |
+
"ci95_hi": 0.9983663938568782,
|
| 73 |
+
"n": 774
|
| 74 |
},
|
| 75 |
"hd95": {
|
| 76 |
+
"mean": 3.406066928008767,
|
| 77 |
+
"std": 9.925369998875073,
|
| 78 |
"min": 1.0,
|
| 79 |
"max": 140.26047197981333,
|
| 80 |
"median": 1.4142135623730951,
|
| 81 |
+
"ci95_lo": 2.7063650657260325,
|
| 82 |
+
"ci95_hi": 4.105768790291502,
|
| 83 |
+
"n": 774
|
| 84 |
},
|
| 85 |
"vol_error": {
|
| 86 |
+
"mean": 0.01023989853744069,
|
| 87 |
+
"std": 0.0597366781553741,
|
| 88 |
"min": 6.480638398430575e-06,
|
| 89 |
"max": 1.013798574273241,
|
| 90 |
+
"median": 0.0036965481252195123,
|
| 91 |
+
"ci95_lo": 0.006028683745786885,
|
| 92 |
+
"ci95_hi": 0.014451113329094495,
|
| 93 |
+
"n": 774
|
| 94 |
}
|
| 95 |
},
|
| 96 |
"per_patient": {
|
|
|
|
| 16096 |
"uid": "1.3.6.1.4.1.14519.5.2.1.6279.6001.398955972049286139436103068984",
|
| 16097 |
"subset": "subset3",
|
| 16098 |
"failure_case": true
|
| 16099 |
+
},
|
| 16100 |
+
"1.3.6.1.4.1.14519.5.2.1.6279.6001.185226274332527104841463955058": {
|
| 16101 |
+
"dice": 0.8727989697757748,
|
| 16102 |
+
"iou": 0.7743063982137922,
|
| 16103 |
+
"f1": 0.8727989697757748,
|
| 16104 |
+
"precision": 0.9673313499957183,
|
| 16105 |
+
"recall": 0.7950980730235704,
|
| 16106 |
+
"sensitivity": 0.7950980730235704,
|
| 16107 |
+
"specificity": 0.9972281575856031,
|
| 16108 |
+
"hd95": 47.0,
|
| 16109 |
+
"vol_error": 0.17804992774496511,
|
| 16110 |
+
"tp": 4680573,
|
| 16111 |
+
"fp": 158072,
|
| 16112 |
+
"fn": 1206214,
|
| 16113 |
+
"tn": 56869701,
|
| 16114 |
+
"pred_voxels": 4838645,
|
| 16115 |
+
"gt_voxels": 5886787,
|
| 16116 |
+
"uid": "1.3.6.1.4.1.14519.5.2.1.6279.6001.185226274332527104841463955058",
|
| 16117 |
+
"subset": "subset4",
|
| 16118 |
+
"failure_case": true
|
| 16119 |
}
|
| 16120 |
}
|
| 16121 |
}
|