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- This dataset integrates Gene Ontology (GO) annotations (filtered to experimental evidence) with bibliographic data from Europe PMC. Each record links a biological entity (gene/protein) to a GO term and the supporting scientific publication.
 
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- Columns:
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- DB, DB_Object_ID, DB_Object_Symbol: source database and gene/protein identifiers
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- Qualifier: relationship qualifier (e.g., “NOT”, “contributes_to”)
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- GO_ID, GO_Name: GO term and its descriptive name
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- DB_Reference: supporting reference (PubMed or other)
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- Evidence_Code: experimental evidence type (e.g., IDA)
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- Aspect: ontology branch (P = process, F = function, C = component)
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- DB_Object_Name, DB_Object_Synonym, DB_Object_Type: entity metadata
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- Taxon: organism taxonomy ID
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- Date, Assigned_By, Annotation_Extension: annotation metadata
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- PMID: PubMed ID for the supporting publication
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- Title, Abstract: publication title and abstract text (fetched from Europe PMC)
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- This forms a structured link between curated GO annotations and natural language descriptions of the underlying biology — suitable for building biological reasoning, text-mining, and literature-grounded ML datasets.
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ ## Dataset Description
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+ This dataset integrates **Gene Ontology (GO)** annotations (filtered to experimental evidence, IDA) with bibliographic data from **Europe PMC**.
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+ Each record links a biological entity (gene/protein) to a GO term and the supporting scientific publication (Title and Abstract).
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+ ### **Columns**
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+
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+ - **DB**, **DB_Object_ID**, **DB_Object_Symbol** — Source database and gene/protein identifiers
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+ - **Qualifier** — Relationship qualifier (e.g., `NOT`, `contributes_to`)
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+ - **GO_ID**, **GO_Name** — GO term and its descriptive name
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+ - **DB_Reference** — Supporting reference (PubMed or other)
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+ - **Evidence_Code** — Experimental evidence type (e.g., `IDA`)
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+ - **Aspect** — Ontology branch (`P` = process, `F` = function, `C` = component)
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+ - **DB_Object_Name**, **DB_Object_Synonym**, **DB_Object_Type** — Entity metadata
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+ - **Taxon** — Organism taxonomy ID
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+ - **Date**, **Assigned_By**, **Annotation_Extension** — Annotation metadata
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+ - **PMID** — PubMed ID for the supporting publication
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+ - **Title**, **Abstract** — Publication title and abstract text (fetched from Europe PMC)
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+
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+
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+ ### **Summary**
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+
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+ This dataset forms a structured link between curated **GO annotations** and **natural language descriptions** of the underlying biology — suitable for:
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+ - Biological reasoning
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+ - Text mining
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+ - Literature-grounded machine learning (ML) datasets