from collections import defaultdict from dp_bench_classes import * import os from pathlib import Path ROOT_DIR = Path(os.path.dirname(os.path.realpath(__file__))).parent DATA_DIR = Path.resolve(ROOT_DIR / "data").resolve() SCHEMA_DIR = (DATA_DIR / "bird_elt_dp/bird_db_schema/").resolve() BENCH_DIR = (DATA_DIR / "dp-bench/").resolve() SQLITE_DB_DIR = (DATA_DIR / "bird_data/").resolve() def extract_xml(txt, target_xml): xmlstart = f"<{target_xml}>" xmlend = f"" if xmlstart not in txt or xmlend not in txt: return [] outputs = [] while xmlstart in txt: txt = txt[txt.find(xmlstart)+len(xmlstart):] outputs.append(txt[:txt.find(xmlend)]) txt = txt[txt.find(xmlend)+len(xmlend):] return outputs def gt_to_db(dbname, raw_gt_data_product): tables = {} derived_columns = [] for table, columns in raw_gt_data_product['dp_tables'].items(): col_types = {} real_cols = set() for col in columns: if col["is_derived"]: # assert len(col['provenance_cols']) == 1 derived_columns.append(DerivedColumn(name=col['name'].lower(), provenance_sql=col['provenance'], provenance_tables={ ptab:Table(name=ptab, columns=set([c.lower() for c in pcols])) for ptab,pcols in col['provenance_cols'].items() })) else: real_cols.add(col['name'].lower()) tables[table] = Table(name=table, columns=real_cols) return DataBase(name=dbname, tables=tables, derived_columns=derived_columns) def viewgen_pred_to_db(dbname, pred_content): tables = {} derived_cols = [] if pred_content is not None: for k,v in pred_content.items(): if k.lower() == 'derived_columns': for dv in v: derived_cols.append(DerivedColumn(name=dv['name'], provenance_sql=dv['SQL'], provenance_tables={ tab:Table(name=tab, columns=set([c.lower() for c in cols])) for tab,cols in dv['source_columns'].items() })) else: try: tables[k.lower()] = Table(name=k.lower(), columns=set(col.lower() for col in v)) except: print(k, v) return DataBase(name=dbname, tables=tables, derived_columns=derived_cols) def get_pred_cols(tabcol, base_schema, all_relevant_cols=False): pred = defaultdict(lambda: set()) for table, columns in tabcol.items(): table = table.lower() if not all_relevant_cols and table == "derived_columns": continue if table not in base_schema: continue for c in columns: c = c.lower() if c in base_schema[table]: pred[table].add(c) else: pass return pred