Download scripts/select_verify.py from ibrahim80876/Change-Detection-LiDAR-Dataset: direct link, hf CLI and curl.
- Browser
- Download file 13.8 kB
-
https://huggingface.co/datasets/ibrahim80876/Change-Detection-LiDAR-Dataset/resolve/main/scripts/select_verify.py
- Command line
-
hf download hf://datasets/ibrahim80876/Change-Detection-LiDAR-Dataset/scripts/select_verify.py
-
curl -L -o select_verify.py https://huggingface.co/datasets/ibrahim80876/Change-Detection-LiDAR-Dataset/resolve/main/scripts/select_verify.py
13.8 kB
| """Select N new 80 m boxes. Each 2023 map and 2025 loop is in its own frame, so: | |
| 1. use the pairwise map<->loop rigid fits (pairwise_frames.json) to predict overlap and generate candidate boxes in the map frame | |
| 2. verify every candidate by a local relief-NCC search of the box template inside the loop (exact yaw + position) | |
| 3. reject duplicates (same physical place) by template-vs-template NCC against existing pairs and already-accepted boxes | |
| Writes selected.json""" | |
| import numpy as np, glob, os, json, sys, time | |
| from scipy.signal import fftconvolve | |
| from pairwise_frames import fps, raster, mncc, CELL as C4 | |
| N_NEW = int(sys.argv[1]) if len(sys.argv) > 1 else 12 | |
| BOX = 80.0; CELL = 2.0; NB = int(BOX / CELL); STEP = 5 | |
| MIN_JOINT = 0.6; MIN_PTS = 300_000; SEP = 130.0 | |
| GHOST_Q10 = float(os.environ.get('GHOST_Q10', 1.0)); GHOST_Q25 = float(os.environ.get('GHOST_Q25', 3.0)) | |
| MIN_SCORE = 0.70; MIN_MARGIN = 0.15; MAX_PER_LOOP = 3; MAX_PER_MAP = 4 | |
| SRC23 = "E:/Subiaco Change Detection point cloud data/Subiaco2023"; SRC25 = "E:/Subiaco Change Detection point cloud data/Subiaco2025" | |
| LOOP_TIME = {1: '1845', 2: '1850', 3: '1852', 4: '1855', 5: '1859', 6: '1902', 7: '1922', 8: '1920', 9: '1918', 10: '1914', 11: '1913', 12: '1910', | |
| 13: '1908', 14: '1904', 15: '2010', 16: '1935', 17: '1940', 18: '2006', 19: '1948', 20: '1958', 21: 'xxxx'} | |
| ANCHORS = {('M2023_20230715_1439', 'Loop3'), ('M2023_20230715_1450', 'Loop4'), ('M2023_20230715_1450', 'Loop6'), | |
| ('M2023_20230715_1514', 'Loop17'), ('M2023_20230715_1459', 'Loop17')} | |
| pw = json.load(open('pairwise_frames.json')) | |
| # override map<->loop transforms with the ones implied by the located existing pairs (more reliable than the global fit) | |
| _l23 = json.load(open('existing_located.json')); _l25 = json.load(open('existing_located_2025.json')) | |
| _corr = {} | |
| for _pr in _l23: | |
| if _l23[_pr]['score'] < 0.7 or _l25[_pr]['score'] < 0.7: continue | |
| _corr.setdefault((_l23[_pr].get('map', _l23[_pr].get('map2023')), _l25[_pr]['map']), []).append((_pr, np.array(_l23[_pr]['centre_new_frame']), np.array(_l25[_pr]['centre_new_frame']), | |
| _l23[_pr]['yaw_deg'] - _l25[_pr]['yaw_deg'])) | |
| for (_m, _l), _cs in _corr.items(): | |
| if len(_cs) >= 2: | |
| A_ = np.array([c[1] for c in _cs]); B_ = np.array([c[2] for c in _cs]) # A_ = map, B_ = loop ; p_map = R p_loop + t | |
| ca, cb = A_.mean(0), B_.mean(0); H = (B_ - cb).T @ (A_ - ca); U, S, Vt = np.linalg.svd(H); R_ = Vt.T @ U.T | |
| if np.linalg.det(R_) < 0: Vt[1] *= -1; R_ = Vt.T @ U.T | |
| yaw_ = float(np.degrees(np.arctan2(R_[1, 0], R_[0, 0]))); t_ = ca - R_ @ cb | |
| else: | |
| yaw_ = float((_cs[0][3] + 180) % 360 - 180); c_, s_ = np.cos(np.radians(yaw_)), np.sin(np.radians(yaw_)) | |
| t_ = _cs[0][1] - np.array([[c_, -s_], [s_, c_]]) @ _cs[0][2] | |
| for o in pw: | |
| if o['map'] == _m and o['loop'] == _l: | |
| print(f"override {_m[6:]}<->{_l}: pairwise yaw {o['yaw_deg']} t {o['t']} score {o['score']} -> anchor yaw {yaw_:.2f} t {t_.round(1).tolist()} from {[c[0] for c in _cs]}") | |
| o['yaw_deg'] = yaw_; o['t'] = t_.tolist(); o['score'] = max(o['score'], 0.9); o['overlap_ha'] = max(o['overlap_ha'], 3.0); o['anchor'] = [c[0] for c in _cs] | |
| combos = [o for o in pw if (o['score'] >= 0.5 and o['overlap_ha'] >= 3.0) or (o['map'], o['loop']) in ANCHORS] | |
| print(f'{len(combos)} map/loop combinations considered') | |
| loc = json.load(open('existing_located.json')) | |
| def rot(yaw): | |
| c, s = np.cos(np.radians(yaw)), np.sin(np.radians(yaw)); return np.array([[c, -s], [s, c]]) | |
| def relief_img(k, cell=CELL): | |
| d = fps[k]; x0, y0 = int(d['cx'].min()), int(d['cy'].min()); W, H = int(d['cx'].max()) - x0 + 1, int(d['cy'].max()) - y0 + 1 | |
| R = np.zeros((H, W)); Q = np.zeros((H, W)); R[d['cy'] - y0, d['cx'] - x0] = np.minimum(d['zmax'] - d['zmin'], 20.0); Q[d['cy'] - y0, d['cx'] - x0] = 1 | |
| return R, Q, x0, y0 | |
| LOOP_IMG = {} | |
| def loop_img(l): | |
| if l not in LOOP_IMG: LOOP_IMG[l] = relief_img(l) | |
| return LOOP_IMG[l] | |
| def box_cells(m, xmin, ymin): | |
| d = fps[m]; x = d['cx'] * 2.0 + 1; y = d['cy'] * 2.0 + 1 | |
| sel = (x >= xmin) & (x < xmin + BOX) & (y >= ymin) & (y < ymin + BOX) | |
| return x[sel], y[sel], np.minimum(d['zmax'][sel] - d['zmin'][sel], 20.0), int(d['n'][sel].sum()) | |
| def template(x, y, rel, yaw): | |
| xy = np.c_[x, y] @ rot(yaw).T | |
| ix = np.floor(xy[:, 0] / CELL).astype(int); iy = np.floor(xy[:, 1] / CELL).astype(int); ox, oy = ix.min(), iy.min(); ix -= ox; iy -= oy | |
| T = np.zeros((iy.max() + 1, ix.max() + 1)); M = np.zeros_like(T); np.maximum.at(T, (iy, ix), rel); M[iy, ix] = 1 | |
| return T, M, ox, oy | |
| def ncc_search(R, Q, x, y, rel, yaws, min_ov): | |
| best = (-2, None) | |
| for yaw in yaws: | |
| T, M, ox, oy = template(x, y, rel, yaw) | |
| cc, n = mncc(R, Q, T, M, min_ov) | |
| iy, ix = np.unravel_index(np.argmax(cc), cc.shape) | |
| if cc[iy, ix] > best[0]: | |
| best = (float(cc[iy, ix]), (float(yaw), ix, iy, T.shape, ox, oy, cc)) | |
| return best | |
| def verify(m, l, xmin, ymin, yaw0): | |
| """template = 2023 box relief; image = whole loop relief. returns dict or None""" | |
| x, y, rel, n23 = box_cells(m, xmin, ymin) | |
| if len(x) < 0.3 * NB * NB: return None | |
| R, Q, lx0, ly0 = loop_img(l) | |
| min_ov = int(0.5 * len(x)) | |
| sc, (yaw, ix, iy, shp, ox, oy, cc) = ncc_search(R, Q, x, y, rel, np.arange(yaw0 - 12, yaw0 + 12.1, 1.0), min_ov) | |
| sc, (yaw, ix, iy, shp, ox, oy, cc) = ncc_search(R, Q, x, y, rel, np.arange(yaw - 1, yaw + 1.01, 0.25), min_ov) | |
| flat = cc.copy(); r = 30; flat[max(0, iy - r):iy + r, max(0, ix - r):ix + r] = -1; second = float(flat.max()) | |
| # template origin (rotated-box coords ox*CELL, oy*CELL) sits at loop image cell (ix-(Tw-1), iy-(Th-1)) | |
| Tw, Th = shp[1], shp[0] | |
| t = np.array([(ix - (Tw - 1) + lx0 - ox) * CELL, (iy - (Th - 1) + ly0 - oy) * CELL]) | |
| ctr_map = np.array([xmin + BOX / 2, ymin + BOX / 2]); ctr_loop = rot(yaw) @ ctr_map + t | |
| corners = np.array([[xmin, ymin], [xmin + BOX, ymin], [xmin, ymin + BOX], [xmin + BOX, ymin + BOX]]) @ rot(yaw).T + t | |
| return {'score': round(sc, 3), 'second': round(second, 3), 'yaw_deg': yaw, 't': t.round(2).tolist(), 'centre_loop': ctr_loop.round(1).tolist(), | |
| 'loop_bbox': [corners.min(0).round(1).tolist(), corners.max(0).round(1).tolist()], 'n2023': n23, 'template': (x, y, rel)} | |
| def tt_ncc(a, b): | |
| """max masked NCC between two box templates over all yaws (duplicate test)""" | |
| xa, ya, ra = a; xb, yb, rb = b | |
| Ta, Ma, _, _ = template(xa, ya, ra, 0.0) | |
| P = 45; R = np.pad(Ta, P); Q = np.pad(Ma, P) | |
| best = -1 | |
| for yaw in np.arange(0, 360, 5.0): | |
| T, M, _, _ = template(xb, yb, rb, yaw) | |
| cc, n = mncc(R, Q, T, M, int(0.4 * min(Ma.sum(), M.sum()))) | |
| best = max(best, float(cc.max())) | |
| return best | |
| # existing pair templates (raw 2023 crops -> 2 m relief cells), for the duplicate test | |
| from align import load, level | |
| EXIST = {} | |
| for pr in sorted(loc): | |
| d = f"E:/Subiaco Change Detection point cloud data/Pairs/{pr}" | |
| f = [f for f in os.listdir(d) if '2023' in f and 'Cloud' in f][0] | |
| P = load(f'{d}/{f}'); P = P - P.mean(0); Pl = level(P)[0] | |
| ix = np.floor(Pl[:, 0] / CELL).astype(int); iy = np.floor(Pl[:, 1] / CELL).astype(int) | |
| key = (ix - ix.min()) * 100000 + (iy - iy.min()); u, inv = np.unique(key, return_inverse=True) | |
| zmin = np.full(len(u), np.inf); zmax = np.full(len(u), -np.inf); np.minimum.at(zmin, inv, Pl[:, 2]); np.maximum.at(zmax, inv, Pl[:, 2]) | |
| cx = (u // 100000 + ix.min()) * CELL + 1; cy = (u % 100000 + iy.min()) * CELL + 1 | |
| EXIST[pr] = (cx, cy, np.minimum(zmax - zmin, 20.0)) | |
| print('existing templates ready') | |
| PW = {(o['map'], o['loop']): o for o in pw} | |
| def same_place_dist(a, b): | |
| """smallest distance (m) between two boxes evaluated in every frame they can both be expressed in""" | |
| ds = [] | |
| if a['map'] == b['map']: ds.append(np.hypot(*(a['pm'] - b['pm']))) | |
| if a['loop'] == b['loop']: ds.append(np.hypot(*(a['pl'] - b['pl']))) | |
| for x, y in ((a, b), (b, a)): # x's map frame <-> y's loop frame via a pairwise fit: p_map = R p_loop + t | |
| o = PW.get((x['map'], y['loop'])) | |
| if o and (o['score'] >= 0.5 or 'anchor' in o): | |
| ds.append(np.hypot(*(x['pm'] - (rot(o['yaw_deg']) @ y['pl'] + np.array(o['t']))))) | |
| return min(ds) if ds else 9999.0 | |
| # candidate generation | |
| cands = [] | |
| for o in combos: | |
| m, l = o['map'], o['loop']; yaw, t = o['yaw_deg'], np.array(o['t']) | |
| dm = fps[m]; x0, y0 = int(dm['cx'].min()), int(dm['cy'].min()); W, H = int(dm['cx'].max()) - x0 + 1, int(dm['cy'].max()) - y0 + 1 | |
| occm = np.zeros((H, W), bool); occm[dm['cy'] - y0, dm['cx'] - x0] = True | |
| cntm = np.zeros((H, W)); cntm[dm['cy'] - y0, dm['cx'] - x0] = dm['n'] | |
| dl = fps[l]; pl = np.c_[dl['cx'] * 2.0 + 1, dl['cy'] * 2.0 + 1] @ rot(yaw).T + t | |
| lx = np.floor(pl[:, 0] / CELL).astype(int) - x0; ly = np.floor(pl[:, 1] / CELL).astype(int) - y0 | |
| ok = (lx >= 0) & (lx < W) & (ly >= 0) & (ly < H) | |
| occl = np.zeros((H, W), bool); occl[ly[ok], lx[ok]] = True | |
| cntl = np.zeros((H, W)); np.add.at(cntl, (ly[ok], lx[ok]), dl['n'][ok]) | |
| # relief (zmax - zmin per 2 m cell) grids for the ghost-layer test: a clean box has many near-flat cells (roads, open ground) | |
| relm = np.full((H, W), np.nan); relm[dm['cy'] - y0, dm['cx'] - x0] = dm['zmax'] - dm['zmin'] | |
| rell = np.full((H, W), np.inf); np.minimum.at(rell, (ly[ok], lx[ok]), (dl['zmax'] - dl['zmin'])[ok]); rell[~np.isfinite(rell)] = np.nan | |
| def integ(g): I = np.zeros((H + 1, W + 1)); I[1:, 1:] = np.cumsum(np.cumsum(g, 0), 1); return I | |
| Ij, Im, Il = integ((occm & occl).astype(float)), integ(cntm), integ(cntl) | |
| for yc in range(0, H - NB + 1, STEP): | |
| for xc in range(0, W - NB + 1, STEP): | |
| bs = lambda I: I[yc + NB, xc + NB] - I[yc, xc + NB] - I[yc + NB, xc] + I[yc, xc] | |
| J = bs(Ij) / (NB * NB) | |
| if J < MIN_JOINT: continue | |
| nm, nl = bs(Im), bs(Il) | |
| if nm < MIN_PTS or nl < MIN_PTS: continue | |
| rm_ = relm[yc:yc + NB, xc:xc + NB]; rl_ = rell[yc:yc + NB, xc:xc + NB] | |
| qm = np.nanpercentile(rm_, [10, 25]); ql = np.nanpercentile(rl_, [10, 25]) | |
| if qm[0] > GHOST_Q10 or qm[1] > GHOST_Q25 or ql[0] > GHOST_Q10 or ql[1] > GHOST_Q25: continue | |
| cands.append({'map': m, 'loop': l, 'xmin': (xc + x0) * CELL, 'ymin': (yc + y0) * CELL, 'joint': float(J), 'n_map': int(nm), 'n_loop_pred': int(nl), 'yaw0': yaw, 'relief_q10_q25_2023': qm.round(2).tolist(), 'relief_q10_q25_2025': ql.round(2).tolist()}) | |
| print(f'{len(cands)} candidates') | |
| cands.sort(key=lambda c: -c['joint']) | |
| sel = []; tried = 0; t0 = time.time() | |
| per_loop = {}; per_map = {} | |
| for c in cands: | |
| if len(sel) >= N_NEW: break | |
| m, l = c['map'], c['loop'] | |
| if per_loop.get(l, 0) >= MAX_PER_LOOP or per_map.get(m, 0) >= MAX_PER_MAP: continue | |
| cx, cy = c['xmin'] + BOX / 2, c['ymin'] + BOX / 2 | |
| if any(s['map'] == m and np.hypot(cx - s['cx'], cy - s['cy']) < SEP for s in sel): continue | |
| if any(e['map2023'] == m and np.hypot(cx - e['centre_new_frame'][0], cy - e['centre_new_frame'][1]) < max(e['half_size_m']) * 1.1 + BOX / 2 + 6 for e in loc.values()): continue | |
| tried += 1 | |
| v = verify(m, l, c['xmin'], c['ymin'], -c['yaw0']) | |
| if v is None: continue | |
| t0_ = np.array(pw[[i for i, o in enumerate(pw) if o['map'] == m and o['loop'] == l][0]]['t']) | |
| pred = rot(c['yaw0']).T @ (np.array([cx, cy]) - t0_) # predicted box centre in the loop frame | |
| far = float(np.hypot(*(np.array(v['centre_loop']) - pred))) | |
| ok = v['score'] >= MIN_SCORE and v['score'] - v['second'] >= MIN_MARGIN and far < 150 | |
| here = {'map': m, 'loop': l, 'pm': np.array([cx, cy]), 'pl': np.array(v['centre_loop'])} | |
| others = [{'map': e.get('map', e.get('map2023')), 'loop': _l25[p]['map'], 'pm': np.array(e['centre_new_frame']), 'pl': np.array(_l25[p]['centre_new_frame'])} | |
| for p, e in loc.items()] + [{'map': s['map'], 'loop': s['loop'], 'pm': np.array([s['cx'], s['cy']]), 'pl': np.array(s['centre_loop'])} for s in sel] | |
| dup = min([same_place_dist(here, o) for o in others] + [9999.0]) if ok else 9999.0 | |
| status = 'ACCEPT' if ok and dup >= SEP else ('DUPLICATE' if ok else 'REJECT') | |
| print(f"[{tried}] {m[6:]}+{l} box({c['xmin']:.0f},{c['ymin']:.0f}) joint={c['joint']:.2f} -> score {v['score']:.2f}/{v['second']:.2f} yaw {v['yaw_deg']:.2f} " | |
| f"pred-err {far:.0f} m nearest-other {dup:.0f} m {status} [{time.time()-t0:.0f}s]", flush=True) | |
| if status != 'ACCEPT': continue | |
| per_loop[l] = per_loop.get(l, 0) + 1; per_map[m] = per_map.get(m, 0) + 1 | |
| s = {'pair': f'Pair{9 + len(sel)}', 'map': m, 'loop': l, 'cx': cx, 'cy': cy, 'xmin': c['xmin'], 'xmax': c['xmin'] + BOX, 'ymin': c['ymin'], 'ymax': c['ymin'] + BOX, | |
| 'joint': c['joint'], 'n2023': v['n2023'], 'n2025_pred': c['n_loop_pred'], 'yaw_deg': v['yaw_deg'], 't': v['t'], 'centre_loop': v['centre_loop'], | |
| 'loop_bbox': v['loop_bbox'], 'score': v['score'], 'second': v['second'], 'pred_err_m': round(far, 1), 'dup_ncc': round(dup, 3), | |
| 'relief_q10_q25_2023': c['relief_q10_q25_2023'], 'relief_q10_q25_2025': c['relief_q10_q25_2025'], | |
| 'src2023': glob.glob(f"{SRC23}/{m[6:19]}*.ply")[0], 'src2025': f"{SRC25}/{l}.ply", 'time2025': LOOP_TIME[int(l[4:])], 'template': v['template']} | |
| sel.append(s) | |
| for s in sel: s.pop('template') | |
| json.dump(sel, open('selected.json', 'w'), indent=1) | |
| print(f'selected {len(sel)} boxes after {tried} verifications') | |