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from protocol_pilot.schema import Protocol, Step, Reagent, validate_protocol
def test_minimal_protocol_valid():
p = Protocol(
title="Example",
sources=["DOI:10.0000/example"],
equipment=["pipette"],
reagents=[Reagent(name="water")],
steps=[Step(number=1, description="Do a thing.")],
safety_notes=["Wear PPE"],
ruo_disclaimer="Research Use Only (RUO). Not for use in diagnostic procedures or patient care.",
)
validate_protocol(p) # should not raise
def test_steps_must_be_sequential():
try:
Protocol(
title="Bad",
sources=["x"],
steps=[Step(number=2, description="oops")],
ruo_disclaimer="Research Use Only (RUO).",
)
except Exception:
assert True
else:
assert False, "Expected an error for non-sequential steps"
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