Update ohio small animals CSVs with filename column

Need unique ID without spaces in it for download with cautious-robot

README.md

@@ -268,6 +268,8 @@ Each of the `<dataset_name>_<type>` CSVs has the following columns.
  - `num_sp_images`: number of images of that species in the dataset.
  For the island CSVs, instead of `num_sp_images` there are `num_fam_images` and `num_cn_images` representing the number of images for the family or common name, respectively.
 
+Additionally, the `ohio-small-animals` CSVs have a `filename` column defined as `OH_sm_animals_<filename in url_aws>`.
+
 
 ### Data Splits
 [More Information Needed]

data/potential-test-sets/filtered/ohio-small-animals-upper-bound.csv

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:892bb597ed604cf4461ebf5674dbf1e3c6642c8bbfe520c92ce4ec2e7a28d75a
-size 61527832
+oid sha256:7fcb646860e51c38cb7ac7001c274d200a5f8cf243702a86bad23c40c099cbf5
+size 65257241

data/potential-test-sets/filtered/ohio-small-animals-upper-lower-bound.csv

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:13341724b852347d612d633b32cd5d044faecfc2af64a24d1f860367ed78a9b3
-size 61507847
+oid sha256:3bb453e9977f393572888a4dcb87270a160d280ade03079c991d540201a9beee
+size 65236110

notebooks/lilabc_test-ohio-small-animal.ipynb

@@ -2,7 +2,7 @@
  "cells": [
   {
    "cell_type": "code",
-   "execution_count": 1,
+   "execution_count": 2,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -1583,7 +1583,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 42,
+   "execution_count": 10,
    "metadata": {},
    "outputs": [
     {
@@ -1592,7 +1592,7 @@
        "468"
       ]
      },
-     "execution_count": 42,
+     "execution_count": 10,
      "metadata": {},
      "output_type": "execute_result"
     }
@@ -1618,7 +1618,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 43,
+   "execution_count": 11,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -1627,6 +1627,118 @@
     "df_balanced.to_csv(\"../data/potential-test-sets/filtered/ohio-small-animals-balanced.csv\", index = False)"
    ]
   },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "### Need to add unique filenames"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 3,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "df_reduced = pd.read_csv(\"../data/potential-test-sets/filtered/ohio-small-animals-upper-bound.csv\", low_memory=False)"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 4,
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "'http://us-west-2.opendata.source.coop.s3.amazonaws.com/agentmorris/lila-wildlife/osu-small-animals/Images/Sorted_by_species/Amphibia/American Bullfrog/BIWA3N_2020-07-12_06-50-28.JPG'"
+      ]
+     },
+     "execution_count": 4,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "df_reduced.url_aws.values[0]"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 5,
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "'https://lilawildlife.blob.core.windows.net/lila-wildlife/osu-small-animals/Images/Sorted_by_species/Amphibia/American Bullfrog/BIWA3N_2020-07-12_06-50-28.JPG'"
+      ]
+     },
+     "execution_count": 5,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "df_reduced.url_azure.values[0]"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 6,
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "'BIWA3N_2020-07-12_06-50-28.JPG'"
+      ]
+     },
+     "execution_count": 6,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "df_reduced.url_aws.values[0].split(\"/\")[-1]"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 7,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "for img_id in list(df_reduced[\"image_id\"]):\n",
+    "    url = df_reduced.loc[df_reduced[\"image_id\"] == img_id, \"url_aws\"].values[0]\n",
+    "    df_reduced.loc[df_reduced[\"image_id\"] == img_id, \"filename\"] = \"OH_sm_animals_\" + url.split(\"/\")[-1]"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Resave upper bound and upper-lower"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 9,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "df_reduced.to_csv(\"../data/potential-test-sets/filtered/ohio-small-animals-upper-bound.csv\", index = False)\n",
+    "df_reduced_upper_lower = df_reduced.loc[df_reduced[\"num_sp_images\"] >= 10].copy()\n",
+    "df_reduced_upper_lower.to_csv(\"../data/potential-test-sets/filtered/ohio-small-animals-upper-lower-bound.csv\", index = False)"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Rerun the balanced set part as well."
+   ]
+  },
   {
    "cell_type": "code",
    "execution_count": null,