Datasets:
clarify dataset structure, adding in parquet files
Browse files
README.md
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@@ -130,11 +130,6 @@ Leaderboard is available on the [Codabench Challenge page](https://www.codabench
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```
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/dataset/
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flatten_images/
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<img_id 1>.png
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<img_id 2>.png
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...
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<img_id n>.png
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color_and_scale_images/
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colorpicker_<colorpicker_id 1>.png
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colorpicker_<colorpicker_id 2>.png
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@@ -144,6 +139,19 @@ Leaderboard is available on the [Codabench Challenge page](https://www.codabench
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scalebar_<scalebarid 2>.png
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scalebar_<scalebarid k>.png
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train.csv
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val.csv
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```
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The `train.csv` and `val.csv` files are to be used for training models for submission and reflect the information that will be given during testing sans `siteID`, `collectDate`, and the target variables `SPEI_30d`, `SPEI_1y`, and `SPEI_2y`. Please see the [challenge sample repository](https://github.com/Imageomics/HDR-SMood-Challenge-sample) for an example of how these were used in training the baseline submission.
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### Data Fields
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Both `train.csv` and `val.csv` have the following columns.
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```
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/dataset/
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color_and_scale_images/
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colorpicker_<colorpicker_id 1>.png
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colorpicker_<colorpicker_id 2>.png
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scalebar_<scalebarid 2>.png
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...
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scalebar_<scalebarid k>.png
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data/
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train-00000-of-00029.parquet
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train-00001-of-00029.parquet
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...
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train-00028-of-00029.parquet
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validation-00000-of-00004.parquet
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...
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validation-00003-of-00004.parquet
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flattened_images/
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<img_id 1>.png
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<img_id 2>.png
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...
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<img_id n>.png
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train.csv
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val.csv
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```
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The `train.csv` and `val.csv` files are to be used for training models for submission and reflect the information that will be given during testing sans `siteID`, `collectDate`, and the target variables `SPEI_30d`, `SPEI_1y`, and `SPEI_2y`. Please see the [challenge sample repository](https://github.com/Imageomics/HDR-SMood-Challenge-sample) for an example of how these were used in training the baseline submission.
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The `data/` folder contains the dataset in parquet format, where `train` prefix indicates it corresponds to the images and metadata in `train.csv`, while `validation` corresponds to `val.csv`. These are rendered by the dataset viewer.
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### Data Fields
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Both `train.csv` and `val.csv` have the following columns.
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