jennamk14 commited on
Commit
502114a
·
verified ·
1 Parent(s): 6b6089e

Update README.md

Browse files

updating dataset card with more detailed structure, data field, and updated citation info

Files changed (1) hide show
  1. README.md +91 -115
README.md CHANGED
@@ -17,109 +17,80 @@ size_categories:
17
  - n<1K
18
  ---
19
 
20
- <!--
21
-
22
- NOTE: Add more tags (your particular animal, type of model and use-case, etc.).
23
-
24
- As with your GitHub Project repo, it is important to choose an appropriate license for your dataset. The default license is [CC0](https://creativecommons.org/publicdomain/zero/1.0/) (public domain dedication, see [Dryad's explanation of why to use CC0](https://blog.datadryad.org/2023/05/30/good-data-practices-removing-barriers-to-data-reuse-with-cc0-licensing/)). Alongside the appropriate stakeholders (eg., your PI, co-authors), select a license that is [Open Source Initiative](https://opensource.org/licenses) (OSI) compliant.
25
- For more information on how to choose a license and why it matters, see [Choose A License](https://choosealicense.com) and [A Quick Guide to Software Licensing for the Scientist-Programmer](https://doi.org/10.1371/journal.pcbi.1002598) by A. Morin, et al.
26
- See the [Imageomics policy for licensing](https://docs.google.com/document/d/1SlITG-r7kdJB6C8f4FCJ9Z7o7ccwldZoSRJKjhRAWVA/edit#heading=h.c1sxg0wsiqru) for more information.
27
-
28
- See more options for the above information by clicking "edit dataset card" on your repo.
29
-
30
- Fill in as much information as you can at each location that says "More information needed".
31
- -->
32
-
33
- <!--
34
- Image with caption:
35
- |![Figure #](https://huggingface.co/imageomics/<data-repo>/resolve/main/<filename>)|
36
- |:--|
37
- |**Figure #.** [Image of <>](https://huggingface.co/imageomics/<data-repo>/raw/main/<filename>) <caption description>.|
38
  -->
39
 
40
- <!--
41
- Notes on styling:
42
-
43
- To render LaTex in your README, wrap the code in `\\(` and `\\)`. Example: \\(\frac{1}{2}\\)
44
 
45
- Escape underscores ("_") with a "\". Example: image\_RGB
46
- -->
47
 
48
- # Dataset Card for wildwingdeployment
49
 
50
- <!-- Provide a quick summary of what the data is or can be used for. -->
51
- Video, telemetry, and autonomous navigation traces from WildWing unmanned aerial system (UAS) deployment at The Wilds in July 2024.
52
 
53
- ## Dataset Description
54
 
55
  <!-- Provide the basic links for the dataset. -->
56
- <!--
57
- - **Homepage:**
58
- -->
59
- - **Repository:** https://github.com/Imageomics/wildwing
60
- <!--
61
- - **Paper:**
62
- - **Leaderboard:**
63
- - -->
64
-
65
- - **Point of Contact:** Jenna Kline; kline dot 377 @ osu dot edu
66
-
67
- ### Dataset Summary
68
 
69
- <!-- Provide a longer summary of what this data is. -->
 
 
70
 
71
- <!--This dataset card aims to be a base template for new datasets. It has been generated using [this raw template](https://github.com/huggingface/huggingface_hub/blob/main/src/huggingface_hub/templates/datasetcard_template.md?plain=1).-->
72
 
73
- <!--
74
- ### Supported Tasks and Leaderboards
75
- [More Information Needed]
76
- -->
77
- ### Languages
78
- english
79
 
80
  ## Dataset Structure
81
 
82
- <!-- Provide format of the dataset, ex:
83
 
84
- ```
85
- /dataset/
86
- Folder_1/
87
- File_1
88
- File_2
89
- ...
90
- File_n
91
- Folder_2/
92
- File_1
93
- File_2
94
- ...
95
- File_n
96
- ...
97
- Folder_N/
98
- File_1
99
- File_2
100
- ...
101
- File_n
102
- metadata.csv
103
- ```
104
-
105
- -->
106
  ```
107
  /wildwingdeployment/
108
- species_MMDDYY_HHMMSS/
109
  frames/
110
- 20.jpg
 
111
  ...
112
  n.jpg
113
  telemetry_log.csv
114
  video.MP4
115
  ...
116
- species_MMDDYY_HHMMSS/
117
  frames/
118
- 20.jpg
 
119
  ...
120
  n.jpg
121
  telemetry_log.csv
122
  video.MP4
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
123
  ```
124
 
125
 
@@ -128,23 +99,37 @@ english
128
  <!--
129
  Describe data files
130
  -->
131
- The data files contain telemetry logs, videos, and a frame folder containing jpgs.
132
- - Telemetry log (CSV): location and status of the drone
133
- - Frame (JPG): Frame from video stream analyzed with YOLO to inform the commands sent to the drone
134
- - Video (MP4): video recorded by the drone during the mission
135
 
136
  ### Data Fields
137
 
138
  <!--
139
  Describe the types of the data files or the columns in a CSV with metadata.
140
  -->
141
- Telemetry logs
142
- - timestamp (YYYY-MM-DD HH:MM:SS)
143
- - location of the drone during the mission (GPS, altitude)
144
- - the commands sent to the drone (move_x, move_y, move_z in meters)
145
- - the frame number sensed at that timestamp
146
-
147
- Note on altitude: The altitude recorded in feet (z column) is not accurate.
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
148
 
149
  <!--
150
  ### Data Splits
@@ -156,7 +141,7 @@ Give your train-test splits for benchmarking
156
  ## Dataset Creation
157
 
158
  ### Curation Rationale
159
- Data gathered to test the WildWing autonomous UAS system, designed to collect animal behavior video data.
160
 
161
  <!--
162
  ### Source Data
@@ -180,15 +165,16 @@ This dataset contains endangered species: Przewalski's horses and Grevy's zebras
180
 
181
  <!-- For instance, if your data includes people or endangered species. -->
182
  <!--
 
183
  ## Considerations for Using the Data
184
  ### Social Impact of Dataset
185
  [More Information Needed]
186
 
187
  ### Discussion of Biases
188
  [More Information Needed]
189
-
190
  ### Other Known Limitations
191
- [More Information Needed]
192
 
193
  <!-- For instance, if your data exhibits a long-tailed distribution (and why). -->
194
 
@@ -202,21 +188,8 @@ Creative Commons Zero 1.0 universal
202
 
203
  ### Citation Information
204
 
205
- <!--
206
- If you want to include BibTex, replace "<>"s with your info
207
- -for an associated paper:
208
- ```
209
- @article{<ref_code>,
210
- title = {<title>},
211
- author = {<author1 and author2>},
212
- journal = {<journal_name>},
213
- year = <year>,
214
- url = {<DOI_URL>},
215
- doi = {<DOI>}
216
- }
217
- ```
218
- -just for data:
219
- -->
220
  ```
221
  @misc{<Kline2024wildwingdeployment>,
222
  author = {Jenna Kline},
@@ -228,18 +201,21 @@ If you want to include BibTex, replace "<>"s with your info
228
  }
229
  ```
230
 
231
- <!---
232
- If the data is modified from another source, add the following.
233
-
234
- Please be sure to also cite the original data source:
235
- <citation>
236
- -->
237
-
 
 
 
 
238
 
239
  ### Contributions
240
 
241
- The [Imageomics Institute](https://imageomics.org) is funded by the US National Science Foundation's Harnessing the Data Revolution (HDR) program under [Award #2118240](https://www.nsf.gov/awardsearch/showAward?AWD_ID=2118240) (Imageomics: A New Frontier of Biological Information Powered by Knowledge-Guided Machine Learning). Any opinions, findings and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.
242
-
243
- <!-- You may also want to credit the source of your data, i.e., if you went to a museum or nature preserve to collect it. -->
244
 
245
- [The Wilds](https://www.thewilds.org/animals) is one of the largest conservation centers in the world, located in Cumberland, OH.
 
 
17
  - n<1K
18
  ---
19
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
20
  -->
21
 
22
+ # Dataset Card for wildwingdeployment
 
 
 
23
 
24
+ ## Dataset Details
 
25
 
26
+ This dataset contains video, telemetry, and autonomous navigation traces collected using the [WildWing](https://imageomics.github.io/wildwing/) unmanned aerial system (UAS) deployment at [The Wilds](https://www.thewilds.org/) in July 2024.
27
 
 
 
28
 
29
+ ### Dataset Description
30
 
31
  <!-- Provide the basic links for the dataset. -->
 
 
 
 
 
 
 
 
 
 
 
 
32
 
33
+ - **Homepage:** https://imageomics.github.io/wildwing/
34
+ - **Repository:** https://github.com/Imageomics/wildwing
35
+ - **Paper:** [WildWing: An open-source, autonomous and affordable UAS for animal behaviour video monitoring](https://besjournals.onlinelibrary.wiley.com/doi/10.1111/2041-210X.70018)
36
 
 
37
 
38
+ This dataset contains video frames collected at [The Wilds Conservation Center](https://www.thewilds.org/) in Ohio, USA, using drones. The Wilds is a 10,000 acre safari park and conservation center that is home to a variety of endangered species. The dataset includes one video of giraffes, one video Przewalski's horse, and three videos Grevy's Zebras. The dataset is intended for use in training and evaluating computer vision models for animal detection and classification from drone imagery.
 
 
 
 
 
39
 
40
  ## Dataset Structure
41
 
 
42
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
43
  ```
44
  /wildwingdeployment/
45
+ giraffe_MMDDYY_HHMMSS/
46
  frames/
47
+ 40.jpg
48
+ 80.jpg
49
  ...
50
  n.jpg
51
  telemetry_log.csv
52
  video.MP4
53
  ...
54
+ phorses_MMDDYY_HHMMSS/
55
  frames/
56
+ 40.jpg
57
+ 80.jpg
58
  ...
59
  n.jpg
60
  telemetry_log.csv
61
  video.MP4
62
+ zebras_MMDDYY_HHMMSS/
63
+ frames/
64
+ 40.jpg
65
+ 80.jpg
66
+ ...
67
+ n.jpg
68
+ telemetry_log.csv
69
+ video.MP4
70
+ zebras_MMDDYY_HHMMSS/
71
+ frames/
72
+ 40.jpg
73
+ 80.jpg
74
+ ...
75
+ n.jpg
76
+ telemetry_log.csv
77
+ video.MP4
78
+ zebras_MMDDYY_HHMMSS/
79
+ frames/
80
+ 40.jpg
81
+ 80.jpg
82
+ ...
83
+ n.jpg
84
+ telemetry_log.csv
85
+ video.MP4
86
+
87
+ /telemetry/
88
+ giraffe_MMDDYY_HHMMSS_telemetry.csv
89
+ phorses_MMDDYY_HHMMSS_telemetry.csv
90
+ zebras_MMDDYY_HHMMSS_telemetry.csv
91
+ zebras_MMDDYY_HHMMSS_telemetry.csv
92
+ zebras_MMDDYY_HHMMSS_telemetry.csv
93
+
94
  ```
95
 
96
 
 
99
  <!--
100
  Describe data files
101
  -->
102
+ The deployment data directory contains telemetry logs, video file, and frames produced for each session. The /frames/ subdirectory contain annotated video frames, downsampled every 40 frames. Each frame contains the YOLO-generated bounding box annotations which were used to inform the commands sent to the drone. The telemetry log contains the location of the drone and the commands sent to it at each frame. The MP4 file is the video recorded by the drone during the mission.
103
+
104
+ The telemetry logs are also available in a separate directory, /telemetry/, which contains the detailed telemetry logs for each session. The telemetry logs contain the location of the drone during the mission (GPS, altitude), the commands sent to the drone (move_x, move_y, move_z in meters), and the frame number sensed at that timestamp.
 
105
 
106
  ### Data Fields
107
 
108
  <!--
109
  Describe the types of the data files or the columns in a CSV with metadata.
110
  -->
111
+ #### /wildwingdeployment/ telemetry_log.csv
112
+ | Field | Description | Details |
113
+ |-------|-------------|---------|
114
+ | timestamp | YYYY-MM-DD HH:MM:SS | Time of the drone mission data point |
115
+ | location | GPS coordinates and altitude | **x**: latitude<br>**y**: longitude<br>**z**: altitude (not accurate) |
116
+ | commands | Movement instructions in meters | **move_x**: x-axis movement in meters<br>**move_y**: y-axis movement in meters<br>**move_z**: z-axis movement in meters |
117
+ | frame | Reference to captured image | See frames/40.jpg, frames/80.jpg, etc. |
118
+
119
+ #### /telemetry/ species_MMDDYY_HHMMSS_telemetry.csv
120
+
121
+ | Field | Description | Details |
122
+ |-------|-------------|---------|
123
+ | timestamp | YYYY-MM-DD HH:MM:SS | Time of the drone mission data point |
124
+ | location | GPS coordinates and altitude | **x**: latitude<br>**y**: longitude<br>**z**: altitude (not accurate) |
125
+ | commands | Movement instructions in meters | **move_x**: x-axis movement in meters<br>**move_y**: y-axis movement in meters<br>**move_z**: z-axis movement in meters |
126
+ | frame | Reference to captured image | See frames/40.jpg, frames/80.jpg, etc. |
127
+ | latitude | - | Direct latitude value |
128
+ | longitude | - | Direct longitude value |
129
+ | directory | - | Session in /wildwingdeployment/ the telemetry log belongs to |
130
+ | distance | meters | Distance travelled from launch point |
131
+ | bearing | degrees | Bearing from launch point |
132
+ | speed | meters/second | Speed of the drone |
133
 
134
  <!--
135
  ### Data Splits
 
141
  ## Dataset Creation
142
 
143
  ### Curation Rationale
144
+ The data gathered to test the [WildWing autonomous UAS system](https://imageomics.github.io/wildwing/), designed to collect animal behavior video data. The goal is to evaluate and improve autonomous tracking and video collection of endangered species in the wild.
145
 
146
  <!--
147
  ### Source Data
 
165
 
166
  <!-- For instance, if your data includes people or endangered species. -->
167
  <!--
168
+
169
  ## Considerations for Using the Data
170
  ### Social Impact of Dataset
171
  [More Information Needed]
172
 
173
  ### Discussion of Biases
174
  [More Information Needed]
175
+ -->
176
  ### Other Known Limitations
177
+ There was an instrument failure which caused the altitude recordings to be inaccurate. The altitude is not accurate, but the x and y coordinates are accurate. The telemetry logs contain the location of the drone during the mission (GPS, altitude), the commands sent to the drone (move_x, move_y, move_z in meters), and the frame number sensed at that timestamp.
178
 
179
  <!-- For instance, if your data exhibits a long-tailed distribution (and why). -->
180
 
 
188
 
189
  ### Citation Information
190
 
191
+ **Data**
192
+
 
 
 
 
 
 
 
 
 
 
 
 
 
193
  ```
194
  @misc{<Kline2024wildwingdeployment>,
195
  author = {Jenna Kline},
 
201
  }
202
  ```
203
 
204
+ **Paper**
205
+ ```​
206
+ @article{kline2025wildwing,
207
+ title={WildWing: An open-source, autonomous and affordable UAS for animal behaviour video monitoring},
208
+ author={Kline, Jenna and Zhong, Alison and Irizarry, Kevyn and Stewart, Charles V and Stewart, Christopher and Rubenstein, Daniel I and Berger-Wolf, Tanya},
209
+ journal={Methods in Ecology and Evolution},
210
+ year={2025},
211
+ doi={10.1111/2041-210X.70018},
212
+ publisher={Wiley Online Library}
213
+ }
214
+ ```
215
 
216
  ### Contributions
217
 
218
+ The [Imageomics Institute](https://imageomics.org) is funded by the US National Science Foundation's Harnessing the Data Revolution (HDR) program under [Award #2118240](https://www.nsf.gov/awardsearch/showAward?AWD_ID=2118240) (Imageomics: A New Frontier of Biological Information Powered by Knowledge-Guided Machine Learning). The National Science Foundation (NSF) supports [ICICLE: Intelligent CI with Computational Learning in the Environment](https://icicle.osu.edu/) under grant number [OAC-2112606](https://www.nsf.gov/awardsearch/showAward?AWD_ID=2112606). Any opinions, findings and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.
 
 
219
 
220
+ ## More Information
221
+ The data was gathered at [The Wilds Conservation Center](https://www.thewilds.org/) with permission from The Wilds Science Committee to take field observations and fly drones in the pastures.