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RVQ (Quick Remote Viewing) dataset processor.
Processes quick remote viewing test data with 5-choice image selection.
Format: 14-15 columns with user, timestamp, trial info, target/response, and 5 image filenames.
Very similar to Card test but with 5 images instead of 1 target image.
"""
from pathlib import Path
from typing import List, Dict, Any, Optional
from datetime import datetime
import pandas as pd
import re
from ..core.base_classes import BaseProcessor
from ..core.config import Config
from ..core.exceptions import ProcessorError
from ..cleaners.encoding_cleaner import EncodingCleaner
from ..cleaners.delimiter_cleaner import DelimiterCleaner
from ..cleaners.temporal_parser import TemporalParser
class RVQProcessor(BaseProcessor):
"""
Processes RVQ (Quick Remote Viewing) data.
Format: 14-15 columns (15 with trailing comma)
- user_id, timestamp, condition, unused, trial_number, is_hit, cumulative_hits,
- target (1-5), response (1-5), image_0, image_1, image_2, image_3, image_4
User sees 5 images and selects which one is the target.
Similar to Card test but with images instead of abstract cards.
"""
# File discovery patterns
FILE_PATTERNS = ['rvq[0-9]*.dat']
# Column definitions
COLUMNS = [
'user_id', 'timestamp', 'condition', 'unused', 'trial_number',
'is_hit', 'cumulative_hits', 'target', 'response',
'image_0', 'image_1', 'image_2', 'image_3', 'image_4'
]
COLUMNS_UNIFIED = [
'user_id', 'timestamp', 'condition', 'trial_number',
'is_hit', 'cumulative_hits', 'target', 'response',
'image_0', 'image_1', 'image_2', 'image_3', 'image_4',
'file_date', 'source_file', 'source_row_number'
]
def __init__(self, config: Config):
"""
Initialize RVQ processor.
Args:
config: Configuration object
"""
super().__init__(config, 'rvq')
# Initialize cleaners
self.encoding_cleaner = EncodingCleaner(config, self.errata_logger)
self.delimiter_cleaner = DelimiterCleaner(config, self.errata_logger)
self.temporal_parser = TemporalParser(config, self.errata_logger)
# Statistics
self.stats = {
'files_processed': 0,
'files_failed': 0,
'rows_total': 0,
'rows_valid': 0,
'rows_invalid': 0
}
def extract_file_date(self, file_path: Path) -> Optional[datetime]:
"""
Extract date from filename (rvqYYMMDD.dat).
Args:
file_path: Path to file
Returns:
datetime object or None
"""
match = re.search(r'rvq(\d{6})\.dat', file_path.name)
if not match:
return None
date_str = match.group(1)
return self.temporal_parser.extract_date_from_filename(file_path.name)
def process_file(self, file_path: Path, pre_cleaned_text: Optional[str] = None) -> Optional[pd.DataFrame]:
"""
Process a single RVQ file.
Args:
file_path: Path to file
pre_cleaned_text: Pre-cleaned text from parallel batch cleaning.
If None, cleans the file inline (backward compat).
Returns:
DataFrame or None if processing fails
"""
try:
# Use pre-cleaned text if available, otherwise clean inline
if pre_cleaned_text is not None:
text = pre_cleaned_text
else:
text = self.encoding_cleaner.clean(file_path)
text = self.delimiter_cleaner.clean(text, file_path=str(file_path))
# Pre-validate lines so bad rows are logged before being removed
text = self.pre_validate_csv_lines(text, file_path=str(file_path))
from io import BytesIO
df = pd.read_csv(BytesIO(text.encode('utf-8')), header=None, on_bad_lines='skip', engine='pyarrow')
if df.empty:
self.errata_logger.log_error(
'empty_file',
'File is empty or has no valid rows - entire file omitted',
file_path=str(file_path),
scope='file'
)
return None
column_count = len(df.columns)
# Handle trailing commas that create empty 15th column
if column_count == 15:
# Drop the last column if it's mostly empty (trailing comma artifact)
# Allow up to 5% of rows to have spurious data in column 15
col_15_data = df.iloc[:, -1].astype(str).str.strip()
empty_count = (col_15_data.isna() | (col_15_data == '')).sum()
empty_ratio = empty_count / len(df) if len(df) > 0 else 0
if empty_ratio >= 0.95: # 95%+ empty means trailing comma artifact
df = df.iloc[:, :-1]
column_count = 14
# Assign column names
if column_count == 14:
df.columns = self.COLUMNS
else:
self.errata_logger.log_error(
'insufficient_columns',
f'Unexpected column count: {column_count} (expected 14) - entire file omitted',
file_path=str(file_path),
scope='file'
)
return None
# Add metadata
file_date = self.extract_file_date(file_path)
df['file_date'] = file_date
# Add audit columns (source file and row numbers)
df['source_file'] = file_path.name
df['source_row_number'] = range(1, len(df) + 1)
# Filter test users (commented out in Perl but good practice)
# test_user_mask = df['user_id'].astype(str).str.startswith('_test999')
# if test_user_mask.any():
# df = df[~test_user_mask]
# Remove 'unused' column (column 3, not needed)
if 'unused' in df.columns:
df = df.drop(columns=['unused'])
# Validate and clean
df = self.validate_dataframe(df, file_path)
# Ensure all unified columns exist AFTER validation
for col in self.COLUMNS_UNIFIED:
if col not in df.columns:
df[col] = None
# Reorder to unified schema
df = df[self.COLUMNS_UNIFIED]
# Update stats
self.stats['files_processed'] += 1
self.stats['rows_valid'] += len(df)
return df
except Exception as e:
import traceback
self.errata_logger.log_error(
'file_processing_failed',
f'{type(e).__name__}: {e} - entire file omitted',
file_path=str(file_path),
scope='file',
context={'traceback': traceback.format_exc()},
)
self.stats['files_failed'] += 1
return None
def validate_dataframe(self, df: pd.DataFrame, file_path: Path) -> pd.DataFrame:
"""
Validate and clean DataFrame.
Args:
df: Input DataFrame
file_path: Source file path
Returns:
Cleaned DataFrame
"""
initial_count = len(df)
valid_mask = pd.Series([True] * len(df), index=df.index)
# Validate user_id length
if 'user_id' in df.columns:
long_users = df['user_id'].str.len() > 64
if long_users.any():
valid_mask &= ~long_users
self.errata_logger.log_error(
'user_id_too_long',
f'{long_users.sum()} rows with user_id > 64 chars',
file_path=str(file_path),
scope='row'
)
# Validate target range (1-5)
if 'target' in df.columns:
df['target'] = self.to_numeric_logged(df['target'], 'target', str(file_path))
invalid_target = (df['target'] < 1) | (df['target'] > 5)
if invalid_target.any():
valid_mask &= ~invalid_target
self.errata_logger.log_error(
'target_out_of_range',
f'{invalid_target.sum()} rows with target not in 1-5',
file_path=str(file_path),
scope='row'
)
# Validate response range (1-5)
if 'response' in df.columns:
df['response'] = self.to_numeric_logged(df['response'], 'response', str(file_path))
invalid_response = (df['response'] < 1) | (df['response'] > 5)
if invalid_response.any():
valid_mask &= ~invalid_response
self.errata_logger.log_error(
'response_out_of_range',
f'{invalid_response.sum()} rows with response not in 1-5',
file_path=str(file_path),
scope='row'
)
# Validate trial_number (1-100)
if 'trial_number' in df.columns:
df['trial_number'] = self.to_numeric_logged(df['trial_number'], 'trial_number', str(file_path))
invalid_trial = (df['trial_number'] < 1) | (df['trial_number'] > 100)
if invalid_trial.any():
valid_mask &= ~invalid_trial
self.errata_logger.log_error(
'trial_number_invalid',
f'{invalid_trial.sum()} rows with trial_number not in 1-100',
file_path=str(file_path),
scope='row'
)
# Validate cumulative_hits <= trial_number
if 'cumulative_hits' in df.columns and 'trial_number' in df.columns:
df['cumulative_hits'] = self.to_numeric_logged(df['cumulative_hits'], 'cumulative_hits', str(file_path))
invalid_hits = df['cumulative_hits'] > df['trial_number']
if invalid_hits.any():
valid_mask &= ~invalid_hits
self.errata_logger.log_error(
'cumulative_hits_exceeds_trials',
f'{invalid_hits.sum()} rows with cumulative_hits > trial_number',
file_path=str(file_path),
scope='row'
)
# Validate hit logic: if is_hit=1, then cumulative_hits must be >= 1
# Also verify is_hit matches (target == response)
if 'is_hit' in df.columns and 'cumulative_hits' in df.columns:
df['is_hit'] = self.to_numeric_logged(df['is_hit'], 'is_hit', str(file_path))
invalid_hit_logic = (df['is_hit'] == 1) & (df['cumulative_hits'] < 1)
if invalid_hit_logic.any():
valid_mask &= ~invalid_hit_logic
self.errata_logger.log_error(
'hit_logic_violation',
f'{invalid_hit_logic.sum()} rows with is_hit=1 but cumulative_hits < 1',
file_path=str(file_path),
scope='row'
)
# Verify is_hit consistency with target/response
if 'is_hit' in df.columns and 'target' in df.columns and 'response' in df.columns:
calculated_hit = (df['target'] == df['response']).astype(int)
hit_mismatch = df['is_hit'] != calculated_hit
if hit_mismatch.any():
# Log but don't filter - use calculated value
self.errata_logger.log_error(
'hit_calculation_mismatch',
f'{hit_mismatch.sum()} rows where is_hit field does not match target==response',
file_path=str(file_path),
scope='row'
)
# Recalculate is_hit based on target/response
df['is_hit'] = calculated_hit
# Parse timestamps
if 'timestamp' in df.columns:
df['timestamp'] = self.temporal_parser.parse_dates_vectorized(
df['timestamp'], file_path=str(file_path)
)
# Convert numeric columns
numeric_cols = [
'condition', 'trial_number', 'is_hit', 'cumulative_hits',
'target', 'response'
]
for col in numeric_cols:
if col in df.columns:
df[col] = self.to_numeric_logged(df[col], col, str(file_path))
# Filter to valid rows
df_valid = df[valid_mask].copy()
invalid_count = initial_count - len(df_valid)
if invalid_count > 0:
self.errata_logger.log_file_summary(
str(file_path),
'partial',
initial_count,
len(df_valid),
invalid_count
)
return df_valid
def get_stats(self) -> Dict[str, Any]:
"""Get processing statistics."""
return self.stats.copy()
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