GotPsi / scripts /audit /audit_users.py
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#!/usr/bin/env python3
"""Audit: Users (Survey Responses) dataset."""
import sys
sys.path.insert(0, str(__import__('pathlib').Path(__file__).resolve().parent))
from _common import *
def main():
output_dir = setup_output_dir('users')
print_section('USERS DATASET AUDIT')
print(f'Audit started: {datetime.now()}')
df = load_parquet('users')
# --- Overview ---
print_section('DATASET OVERVIEW')
df.info()
# --- Missing data ---
print_section('MISSING DATA SUMMARY')
missing = df.isnull().sum()
missing_pct = (missing / len(df) * 100).round(2)
missing_df = pd.DataFrame({
'Missing Count': missing,
'Missing %': missing_pct
}).sort_values('Missing %', ascending=False)
print(missing_df[missing_df['Missing Count'] > 0])
# --- Psi/Hemi summaries ---
psi_cols = [f'psi_{i:02d}' for i in range(1, 16)]
hemi_cols = [f'hemi_{i:02d}' for i in range(1, 11)]
print_section('SURVEY QUESTION SUMMARIES')
print('PSI QUESTIONS SUMMARY (1-5 scale)')
print(df[psi_cols].describe())
print('\nHEMI QUESTIONS SUMMARY (1-5 scale)')
print(df[hemi_cols].describe())
# --- Temporal ---
df['timestamp'] = pd.to_datetime(df['timestamp'])
df['date'] = df['timestamp'].dt.date
df['year'] = df['timestamp'].dt.year
df['month'] = df['timestamp'].dt.to_period('M')
print_section('TEMPORAL ANALYSIS')
print(f'First record: {df["timestamp"].min()}')
print(f'Last record: {df["timestamp"].max()}')
print(f'Time span: {(df["timestamp"].max() - df["timestamp"].min()).days} days')
print(f'Years: {df["year"].min()} to {df["year"].max()}')
yearly_counts = df['year'].value_counts().sort_index()
print('\nYEARLY DISTRIBUTION')
print(yearly_counts)
plt.figure(figsize=(14, 6))
yearly_counts.plot(kind='bar', color='steelblue')
plt.title('Users Dataset Audit - Yearly Distribution', fontsize=14, fontweight='bold')
plt.xlabel('Year')
plt.ylabel('Number of Users')
plt.xticks(rotation=45)
plt.grid(axis='y', alpha=0.3)
plt.tight_layout()
save_fig(output_dir, 'yearly_distribution')
# Monthly continuity
monthly_counts = df.groupby('month').size()
plt.figure(figsize=(16, 6))
monthly_counts.plot(kind='line', marker='o', markersize=3)
plt.title('Survey Responses by Month (Temporal Continuity Check)', fontsize=14, fontweight='bold')
plt.xlabel('Month')
plt.ylabel('Number of Users')
plt.grid(alpha=0.3)
plt.tight_layout()
save_fig(output_dir, 'monthly_continuity')
all_months = pd.period_range(start=monthly_counts.index.min(),
end=monthly_counts.index.max(), freq='M')
missing_months = all_months.difference(monthly_counts.index)
if len(missing_months) > 0:
print(f'\n{len(missing_months)} months with ZERO responses:')
for month in missing_months[:10]:
print(f' - {month}')
if len(missing_months) > 10:
print(f' ... and {len(missing_months) - 10} more')
else:
print('\nNo missing months - data is temporally continuous')
# --- Deduplication check ---
print_section('DEDUPLICATION CHECK')
uid_col = 'username_hash' if 'username_hash' in df.columns else 'username'
print(f'Total rows: {len(df):,}')
print(f'Unique {uid_col}: {df[uid_col].nunique():,}')
if 'username' in df.columns:
duplicates = df[df.duplicated(subset=['username'], keep=False)]
if len(duplicates) > 0:
print(f'\nCRITICAL: Found {len(duplicates)} duplicate username records!')
print(duplicates[['username', 'timestamp', 'na_count_psi_and_hemi']].head(20))
else:
print('\nPASS: No duplicate usernames found')
hash_duplicates = df[df.duplicated(subset=[uid_col], keep=False)]
if len(hash_duplicates) > 0:
print(f'\nCRITICAL: Found {len(hash_duplicates)} duplicate {uid_col} records!')
else:
print(f'PASS: All {uid_col} values are unique')
# --- Survey completeness ---
print_section('SURVEY COMPLETENESS')
na_dist = df['na_count_psi_and_hemi'].value_counts().sort_index()
complete_surveys = int((df['na_count_psi_and_hemi'] == 0).sum())
complete_pct = complete_surveys / len(df) * 100
print(f'Complete surveys (0 NAs): {complete_surveys:,} ({complete_pct:.1f}%)')
print(f'Partial surveys (1+ NAs): {len(df) - complete_surveys:,} ({100 - complete_pct:.1f}%)')
print(f'\nNA Count Distribution (0 = complete, 25 = all questions skipped):')
print(na_dist.head(10))
plt.figure(figsize=(12, 5))
na_dist.plot(kind='bar', color='coral')
plt.title('Survey Completeness Distribution', fontsize=14, fontweight='bold')
plt.xlabel('Number of Unanswered Questions')
plt.ylabel('Number of Users')
plt.tight_layout()
save_fig(output_dir, 'survey_completeness')
# Question-by-question completion
psi_completion = {col: (df[col].notna().sum() / len(df) * 100) for col in psi_cols}
hemi_completion = {col: (df[col].notna().sum() / len(df) * 100) for col in hemi_cols}
print('\nPSI QUESTION COMPLETION RATES')
for col, rate in psi_completion.items():
print(f'{col}: {rate:.1f}%')
print('\nHEMI QUESTION COMPLETION RATES')
for col, rate in hemi_completion.items():
print(f'{col}: {rate:.1f}%')
fig, (ax1, ax2) = plt.subplots(1, 2, figsize=(16, 5))
ax1.bar(range(len(psi_completion)), list(psi_completion.values()), color='skyblue')
ax1.set_title('Psi Question Completion Rates', fontweight='bold')
ax1.set_xlabel('Question Number')
ax1.set_ylabel('Completion Rate (%)')
ax1.set_ylim(0, 100)
ax1.axhline(y=90, color='green', linestyle='--', alpha=0.5, label='90% threshold')
ax1.legend()
ax2.bar(range(len(hemi_completion)), list(hemi_completion.values()), color='lightcoral')
ax2.set_title('Hemi Question Completion Rates', fontweight='bold')
ax2.set_xlabel('Question Number')
ax2.set_ylabel('Completion Rate (%)')
ax2.set_ylim(0, 100)
ax2.axhline(y=90, color='green', linestyle='--', alpha=0.5, label='90% threshold')
ax2.legend()
plt.tight_layout()
save_fig(output_dir, 'question_completion_rates')
# --- File type distribution ---
if 'file_type' in df.columns:
print_section('FILE TYPE DISTRIBUTION')
file_type_dist = df['file_type'].value_counts()
print(file_type_dist)
plt.figure(figsize=(8, 5))
file_type_dist.plot(kind='bar', color=['steelblue', 'darkorange'])
plt.title('Source File Type Distribution', fontsize=14, fontweight='bold')
plt.xlabel('File Type')
plt.ylabel('Number of Records')
plt.xticks(rotation=0)
plt.tight_layout()
save_fig(output_dir, 'file_type_distribution')
print('\nFILE TYPE BY YEAR')
file_type_year = df.groupby(['year', 'file_type']).size().unstack(fill_value=0)
print(file_type_year)
file_type_year.plot(kind='bar', stacked=True, figsize=(14, 6))
plt.title('File Type Distribution by Year', fontsize=14, fontweight='bold')
plt.xlabel('Year')
plt.ylabel('Number of Records')
plt.legend(title='File Type')
plt.tight_layout()
save_fig(output_dir, 'file_type_by_year')
# --- Location data quality ---
print_section('LOCATION DATA QUALITY')
location_cols = ['state', 'coordinates', 'country']
has_any_location = 0
for col in location_cols:
if col in df.columns:
filled = df[col].notna().sum()
pct = filled / len(df) * 100
print(f'{col:12s}: {filled:6,} filled ({pct:5.1f}%)')
has_any_location = int(df[location_cols].notna().any(axis=1).sum())
has_all_location = int(df[location_cols].notna().all(axis=1).sum())
print(f'\nUsers with ANY location data: {has_any_location:,} ({has_any_location / len(df) * 100:.1f}%)')
print(f'Users with ALL location data: {has_all_location:,} ({has_all_location / len(df) * 100:.1f}%)')
if 'country' in df.columns and df['country'].notna().any():
print('\nTOP 20 COUNTRIES')
top_countries = df['country'].value_counts().head(20)
print(top_countries)
plt.figure(figsize=(12, 6))
top_countries.plot(kind='barh', color='teal')
plt.title('Top 20 Countries by User Count', fontsize=14, fontweight='bold')
plt.xlabel('Number of Users')
plt.ylabel('Country')
plt.gca().invert_yaxis()
plt.tight_layout()
save_fig(output_dir, 'top_countries')
# --- Validation ---
print_section('RESPONSE VALIDATION')
print('Psi/Hemi responses must be 1-5 or NULL')
all_survey_cols = psi_cols + hemi_cols
invalid_responses = {}
for col in all_survey_cols:
invalid = df[(df[col].notna()) & ((df[col] < 1) | (df[col] > 5))]
if len(invalid) > 0:
invalid_responses[col] = len(invalid)
if invalid_responses:
print('FAIL: Found invalid responses (not in 1-5 range):')
for col, count in invalid_responses.items():
print(f' {col}: {count} invalid values')
else:
print('PASS: All Psi/Hemi responses are in valid range (1-5)')
# na_count consistency
print('\nna_count_psi_and_hemi should match actual NAs')
actual_na_count = df[all_survey_cols].isnull().sum(axis=1)
reported_na_count = df['na_count_psi_and_hemi']
mismatch = (actual_na_count != reported_na_count)
mismatch_count = int(mismatch.sum())
if mismatch_count > 0:
print(f'WARNING: {mismatch_count} rows with na_count mismatch')
sample = df[mismatch][['username_hash', 'na_count_psi_and_hemi']].head(10).copy()
sample['actual_na_count'] = actual_na_count[mismatch].head(10).values
print(sample)
else:
print('PASS: All na_count_psi_and_hemi values match actual NA counts')
# --- Summary ---
standard_audit_summary('Users Dataset', df, extra_lines=[
f'Complete Surveys: {complete_surveys:,} ({complete_pct:.1f}%)',
f'Location Coverage: {has_any_location / len(df) * 100:.1f}%',
])
if __name__ == '__main__':
main()