""" Process full CardD dataset and export to Parquet. Processes all 6000+ CardD files and exports cleaned data. """ import sys import argparse from pathlib import Path from datetime import datetime sys.path.insert(0, str(Path(__file__).parent.parent)) from src.core.config import Config from src.core.output_lock import seal_output, unlock_for_write from src.processors.cardd_processor import CardDProcessor def main(): parser = argparse.ArgumentParser(description='Process CardD dataset') parser.add_argument('--audit', action='store_true', help='Include source_file and source_row_number columns in output') parser.add_argument('--data-dir', help='Override raw data directory (default: data/)') args = parser.parse_args() print("="*70) print("CardD Full Dataset Processing") print("="*70) print() start_time = datetime.now() # Load config config = Config('config/cleaning_config.yaml') # Override audit mode if --audit flag is provided if args.audit: config.set('processing.audit_mode', True) print("Audit mode: ENABLED (including source_file and source_row_number columns)") print() # Override data directory if --data-dir flag is provided if args.data_dir: config.set('directories.raw_data', args.data_dir) # Create output directory output_dir = config.output_dir / 'parquet' output_dir.mkdir(parents=True, exist_ok=True) output_file = output_dir / 'cardD_cleaned.parquet' print(f"Output file: {output_file}") print() # Create processor processor = CardDProcessor(config) # Get file count all_files = processor.get_file_list() print(f"Total files to process: {len(all_files)}") print() # Process all files print("Processing all CardD files...") print("This may take 30-60 minutes depending on system speed...") print() try: df = processor.process() elapsed = datetime.now() - start_time print() print("="*70) print("✓ Processing Complete!") print("="*70) print() # Show stats stats = processor.get_stats() print("Processing Statistics:") print(f" Files processed: {stats['files_processed']:,}") print(f" Files failed: {stats['files_failed']:,}") print(f" Success rate: {stats['files_processed'] / len(all_files) * 100:.1f}%") print() print(f" Schema v1 files (pre 2006-06-22): {stats['schema_v1_files']:,}") print(f" Schema v2 files (post 2006-06-22): {stats['schema_v2_files']:,}") print() print(f" Total rows: {len(df):,}") print(f" Valid rows: {stats['rows_valid']:,}") print() # Data quality metrics print("Data Quality:") completeness = df.notna().sum() / len(df) print(f" Completeness (avg): {completeness.mean():.1%}") print(f" Missing timestamps: {df['timestamp'].isna().sum():,} ({df['timestamp'].isna().sum() / len(df) * 100:.1f}%)") print() # Date range if 'timestamp' in df.columns: valid_ts = df['timestamp'].dropna() if not valid_ts.empty: print(f"Date range: {valid_ts.min()} to {valid_ts.max()}") print(f"Span: {(valid_ts.max() - valid_ts.min()).days} days") print() # User statistics print("User Statistics:") n_users = df['user_id'].nunique() print(f" Unique users: {n_users:,}") if n_users > 0: print(f" Trials per user (mean): {len(df) / n_users:.0f}") print() # Performance stats print(f"Processing time: {elapsed}") print(f"Speed: {len(df) / elapsed.total_seconds():.0f} rows/second") print() # Export to Parquet print("Exporting to Parquet...") unlock_for_write(output_file) df.to_parquet( output_file, engine='pyarrow', compression='snappy', index=False ) seal_output(output_file) file_size_mb = output_file.stat().st_size / (1024 * 1024) print(f"✓ Exported to: {output_file}") print(f" File size: {file_size_mb:.1f} MB") print() # Compression ratio raw_size_estimate = len(df) * 200 # Rough estimate of ~200 bytes/row in CSV compression_ratio = raw_size_estimate / output_file.stat().st_size print(f" Compression ratio: {compression_ratio:.1f}x") print() # Show errata summary errata_summary = processor.errata_logger.get_summary() print("Error Summary:") print(f" Total errors: {errata_summary['total_errors']:,}") print(f" Files with errors: {errata_summary['files_with_errors']:,}") if errata_summary['error_types']: print(f" Error types:") for error_type, count in errata_summary['error_types'].items(): print(f" - {error_type}: {count:,}") print(f" Errata log: {errata_summary['log_file']}") print() print("="*70) print("✓ CardD Dataset Processing Complete!") print("="*70) except KeyboardInterrupt: print("\n\n✗ Processing interrupted by user") sys.exit(1) except Exception as e: print(f"\n✗ Processing failed: {e}") import traceback traceback.print_exc() sys.exit(1) if __name__ == '__main__': main()