| """ |
| Dataset Specifics |
| Extended from ADNet code by Hansen et al. |
| """ |
|
|
| import torch |
| import random |
|
|
|
|
| def get_label_names(dataset): |
| label_names = {} |
| if dataset == 'CMR': |
| label_names[0] = 'BG' |
| label_names[1] = 'LV-MYO' |
| label_names[2] = 'LV-BP' |
| label_names[3] = 'RV' |
|
|
| elif dataset == 'CHAOST2': |
| label_names[0] = 'BG' |
| label_names[1] = 'LIVER' |
| label_names[2] = 'RK' |
| label_names[3] = 'LK' |
| label_names[4] = 'SPLEEN' |
| elif dataset == 'SABS': |
| label_names[0] = 'BG' |
| label_names[1] = 'SPLEEN' |
| label_names[2] = 'RK' |
| label_names[3] = 'LK' |
| label_names[4] = 'GALLBLADDER' |
| label_names[5] = 'ESOPHAGUS' |
| label_names[6] = 'LIVER' |
| label_names[7] = 'STOMACH' |
| label_names[8] = 'AORTA' |
| label_names[9] = 'IVC' |
| label_names[10] = 'PS_VEIN' |
| label_names[11] = 'PANCREAS' |
| label_names[12] = 'AG_R' |
| label_names[13] = 'AG_L' |
|
|
| return label_names |
|
|
|
|
| def get_folds(dataset): |
| FOLD = {} |
| if dataset == 'CMR': |
| FOLD[0] = set(range(0, 8)) |
| FOLD[1] = set(range(7, 15)) |
| FOLD[2] = set(range(14, 22)) |
| FOLD[3] = set(range(21, 29)) |
| FOLD[4] = set(range(28, 35)) |
| FOLD[4].update([0]) |
| return FOLD |
|
|
| elif dataset == 'CHAOST2': |
| FOLD[0] = set(range(0, 5)) |
| FOLD[1] = set(range(4, 9)) |
| FOLD[2] = set(range(8, 13)) |
| FOLD[3] = set(range(12, 17)) |
| FOLD[4] = set(range(16, 20)) |
| FOLD[4].update([0]) |
| return FOLD |
| elif dataset == 'SABS': |
| FOLD[0] = set(range(0, 7)) |
| FOLD[1] = set(range(6, 13)) |
| FOLD[2] = set(range(12, 19)) |
| FOLD[3] = set(range(18, 25)) |
| FOLD[4] = set(range(24, 30)) |
| FOLD[4].update([0]) |
| return FOLD |
| else: |
| raise ValueError(f'Dataset: {dataset} not found') |
|
|
|
|
| def sample_xy(spr, k=0, b=215): |
| _, h, v = torch.where(spr) |
|
|
| if len(h) == 0 or len(v) == 0: |
| horizontal = 0 |
| vertical = 0 |
| else: |
|
|
| h_min = min(h) |
| h_max = max(h) |
| if b > (h_max - h_min): |
| kk = min(k, int((h_max - h_min) / 2)) |
| horizontal = random.randint(max(h_max - b - kk, 0), min(h_min + kk, 256 - b - 1)) |
| else: |
| kk = min(k, int(b / 2)) |
| horizontal = random.randint(max(h_min - kk, 0), min(h_max - b + kk, 256 - b - 1)) |
|
|
| v_min = min(v) |
| v_max = max(v) |
| if b > (v_max - v_min): |
| kk = min(k, int((v_max - v_min) / 2)) |
| vertical = random.randint(max(v_max - b - kk, 0), min(v_min + kk, 256 - b - 1)) |
| else: |
| kk = min(k, int(b / 2)) |
| vertical = random.randint(max(v_min - kk, 0), min(v_max - b + kk, 256 - b - 1)) |
|
|
| return horizontal, vertical |
|
|