import os import numpy as np import torch from torch.utils.data import Dataset class ProstateDataset(Dataset): def __init__(self, data_root, patient_id, neg_points): self.data_root = data_root self.npz_files = sorted(patient_id) self.neg_points = neg_points self.image_scale = 4 # 1024 / 256 def __len__(self): return len(self.npz_files) def __getitem__(self, index): npz_data = np.load(os.path.join(self.data_root, self.npz_files[index]), allow_pickle=True) img_embed = npz_data['img_embeddings'] img_embed = [torch.tensor(x).float() for x in img_embed] gt2D = npz_data['gts'] is_background = np.random.randint(0, self.neg_points+1) if is_background: # background point y_indices, x_indices = np.where(gt2D == 0) random_idx = np.random.randint(0, len(y_indices)) prompt_points = np.array(( x_indices[random_idx] * self.image_scale, y_indices[random_idx] * self.image_scale )) iou_label = torch.tensor([0]).float() else: # foreground point y_indices, x_indices = np.where(gt2D > 0) random_idx = np.random.randint(0, len(y_indices)) prompt_points = np.array(( x_indices[random_idx] * self.image_scale, y_indices[random_idx] * self.image_scale )) iou_label = torch.tensor([1]).float() in_points = torch.as_tensor(prompt_points) in_labels = 1 # convert img embedding, mask, bounding box to torch tensor return img_embed, torch.tensor(gt2D[None, :,:]).float(), in_points, in_labels, iou_label