| import torch |
| import torch.nn as nn |
| import torch.nn.functional as F |
| from torch.nn import init |
|
|
|
|
| def init_weights(net, init_type='normal', gain=0.02): |
| def init_func(m): |
| classname = m.__class__.__name__ |
| if hasattr(m, 'weight') and (classname.find('Conv') != -1 or classname.find('Linear') != -1): |
| if init_type == 'normal': |
| init.normal_(m.weight.data, 0.0, gain) |
| elif init_type == 'xavier': |
| init.xavier_normal_(m.weight.data, gain=gain) |
| elif init_type == 'kaiming': |
| init.kaiming_normal_(m.weight.data, a=0, mode='fan_in') |
| elif init_type == 'orthogonal': |
| init.orthogonal_(m.weight.data, gain=gain) |
| else: |
| raise NotImplementedError('initialization method [%s] is not implemented' % init_type) |
| if hasattr(m, 'bias') and m.bias is not None: |
| init.constant_(m.bias.data, 0.0) |
| elif classname.find('BatchNorm2d') != -1: |
| init.normal_(m.weight.data, 1.0, gain) |
| init.constant_(m.bias.data, 0.0) |
|
|
| print('initialize network with %s' % init_type) |
| net.apply(init_func) |
|
|
|
|
| class conv_block(nn.Module): |
| def __init__(self, ch_in, ch_out): |
| super(conv_block, self).__init__() |
| self.conv = nn.Sequential( |
| nn.Conv2d(ch_in, ch_out, kernel_size=3, stride=1, padding=1, bias=True), |
| nn.BatchNorm2d(ch_out), |
| nn.ReLU(inplace=True), |
| nn.Conv2d(ch_out, ch_out, kernel_size=3, stride=1, padding=1, bias=True), |
| nn.BatchNorm2d(ch_out), |
| nn.ReLU(inplace=True) |
| ) |
|
|
| def forward(self, x): |
| x = self.conv(x) |
| return x |
|
|
|
|
| class up_conv(nn.Module): |
| def __init__(self, ch_in, ch_out): |
| super(up_conv, self).__init__() |
| self.up = nn.Sequential( |
| nn.Upsample(scale_factor=2), |
| nn.Conv2d(ch_in, ch_out, kernel_size=3, stride=1, padding=1, bias=True), |
| nn.BatchNorm2d(ch_out), |
| nn.ReLU(inplace=True) |
| ) |
|
|
| def forward(self, x): |
| x = self.up(x) |
| return x |
|
|
|
|
| class Recurrent_block(nn.Module): |
| def __init__(self, ch_out, t=2): |
| super(Recurrent_block, self).__init__() |
| self.t = t |
| self.ch_out = ch_out |
| self.conv = nn.Sequential( |
| nn.Conv2d(ch_out, ch_out, kernel_size=3, stride=1, padding=1, bias=True), |
| nn.BatchNorm2d(ch_out), |
| nn.ReLU(inplace=True) |
| ) |
|
|
| def forward(self, x): |
| for i in range(self.t): |
|
|
| if i == 0: |
| x1 = self.conv(x) |
|
|
| x1 = self.conv(x + x1) |
| return x1 |
|
|
|
|
| class RRCNN_block(nn.Module): |
| def __init__(self, ch_in, ch_out, t=2): |
| super(RRCNN_block, self).__init__() |
| self.RCNN = nn.Sequential( |
| Recurrent_block(ch_out, t=t), |
| Recurrent_block(ch_out, t=t) |
| ) |
| self.Conv_1x1 = nn.Conv2d(ch_in, ch_out, kernel_size=1, stride=1, padding=0) |
|
|
| def forward(self, x): |
| x = self.Conv_1x1(x) |
| x1 = self.RCNN(x) |
| return x + x1 |
|
|
|
|
| class single_conv(nn.Module): |
| def __init__(self, ch_in, ch_out): |
| super(single_conv, self).__init__() |
| self.conv = nn.Sequential( |
| nn.Conv2d(ch_in, ch_out, kernel_size=3, stride=1, padding=1, bias=True), |
| nn.BatchNorm2d(ch_out), |
| nn.ReLU(inplace=True) |
| ) |
|
|
| def forward(self, x): |
| x = self.conv(x) |
| return x |
|
|
|
|
| class Attention_block(nn.Module): |
| def __init__(self, F_g, F_l, F_int): |
| super(Attention_block, self).__init__() |
| self.W_g = nn.Sequential( |
| nn.Conv2d(F_g, F_int, kernel_size=1, stride=1, padding=0, bias=True), |
| nn.BatchNorm2d(F_int) |
| ) |
|
|
| self.W_x = nn.Sequential( |
| nn.Conv2d(F_l, F_int, kernel_size=1, stride=1, padding=0, bias=True), |
| nn.BatchNorm2d(F_int) |
| ) |
|
|
| self.psi = nn.Sequential( |
| nn.Conv2d(F_int, 1, kernel_size=1, stride=1, padding=0, bias=True), |
| nn.BatchNorm2d(1), |
| nn.Sigmoid() |
| ) |
|
|
| self.relu = nn.ReLU(inplace=True) |
|
|
| def forward(self, g, x): |
| g1 = self.W_g(g) |
| x1 = self.W_x(x) |
| psi = self.relu(g1 + x1) |
| psi = self.psi(psi) |
|
|
| return x * psi |
|
|
|
|
| class U_Net(nn.Module): |
| def __init__(self, img_ch=3, output_ch=1): |
| super(U_Net, self).__init__() |
|
|
| self.Maxpool = nn.MaxPool2d(kernel_size=2, stride=2) |
|
|
| self.Conv1 = conv_block(ch_in=img_ch, ch_out=64) |
| self.Conv2 = conv_block(ch_in=64, ch_out=128) |
| self.Conv3 = conv_block(ch_in=128, ch_out=256) |
| self.Conv4 = conv_block(ch_in=256, ch_out=512) |
| self.Conv5 = conv_block(ch_in=512, ch_out=1024) |
|
|
| self.Up5 = up_conv(ch_in=1024, ch_out=512) |
| self.Up_conv5 = conv_block(ch_in=1024, ch_out=512) |
|
|
| self.Up4 = up_conv(ch_in=512, ch_out=256) |
| self.Up_conv4 = conv_block(ch_in=512, ch_out=256) |
|
|
| self.Up3 = up_conv(ch_in=256, ch_out=128) |
| self.Up_conv3 = conv_block(ch_in=256, ch_out=128) |
|
|
| self.Up2 = up_conv(ch_in=128, ch_out=64) |
| self.Up_conv2 = conv_block(ch_in=128, ch_out=64) |
|
|
| self.Conv_1x1 = nn.Conv2d(64, output_ch, kernel_size=1, stride=1, padding=0) |
|
|
| def forward(self, x): |
| |
| x1 = self.Conv1(x) |
|
|
| x2 = self.Maxpool(x1) |
| x2 = self.Conv2(x2) |
|
|
| x3 = self.Maxpool(x2) |
| x3 = self.Conv3(x3) |
|
|
| x4 = self.Maxpool(x3) |
| x4 = self.Conv4(x4) |
|
|
| x5 = self.Maxpool(x4) |
| x5 = self.Conv5(x5) |
|
|
| |
| d5 = self.Up5(x5) |
| d5 = torch.cat((x4, d5), dim=1) |
|
|
| d5 = self.Up_conv5(d5) |
|
|
| d4 = self.Up4(d5) |
| d4 = torch.cat((x3, d4), dim=1) |
| d4 = self.Up_conv4(d4) |
|
|
| d3 = self.Up3(d4) |
| d3 = torch.cat((x2, d3), dim=1) |
| d3 = self.Up_conv3(d3) |
|
|
| d2 = self.Up2(d3) |
| d2 = torch.cat((x1, d2), dim=1) |
| d2 = self.Up_conv2(d2) |
|
|
| d1 = self.Conv_1x1(d2) |
|
|
| return d1 |
|
|
|
|
| class R2U_Net(nn.Module): |
| def __init__(self, img_ch=3, output_ch=1, t=2): |
| super(R2U_Net, self).__init__() |
|
|
| self.Maxpool = nn.MaxPool2d(kernel_size=2, stride=2) |
| self.Upsample = nn.Upsample(scale_factor=2) |
|
|
| self.RRCNN1 = RRCNN_block(ch_in=img_ch, ch_out=64, t=t) |
|
|
| self.RRCNN2 = RRCNN_block(ch_in=64, ch_out=128, t=t) |
|
|
| self.RRCNN3 = RRCNN_block(ch_in=128, ch_out=256, t=t) |
|
|
| self.RRCNN4 = RRCNN_block(ch_in=256, ch_out=512, t=t) |
|
|
| self.RRCNN5 = RRCNN_block(ch_in=512, ch_out=1024, t=t) |
|
|
| self.Up5 = up_conv(ch_in=1024, ch_out=512) |
| self.Up_RRCNN5 = RRCNN_block(ch_in=1024, ch_out=512, t=t) |
|
|
| self.Up4 = up_conv(ch_in=512, ch_out=256) |
| self.Up_RRCNN4 = RRCNN_block(ch_in=512, ch_out=256, t=t) |
|
|
| self.Up3 = up_conv(ch_in=256, ch_out=128) |
| self.Up_RRCNN3 = RRCNN_block(ch_in=256, ch_out=128, t=t) |
|
|
| self.Up2 = up_conv(ch_in=128, ch_out=64) |
| self.Up_RRCNN2 = RRCNN_block(ch_in=128, ch_out=64, t=t) |
|
|
| self.Conv_1x1 = nn.Conv2d(64, output_ch, kernel_size=1, stride=1, padding=0) |
|
|
| def forward(self, x): |
| |
| x1 = self.RRCNN1(x) |
|
|
| x2 = self.Maxpool(x1) |
| x2 = self.RRCNN2(x2) |
|
|
| x3 = self.Maxpool(x2) |
| x3 = self.RRCNN3(x3) |
|
|
| x4 = self.Maxpool(x3) |
| x4 = self.RRCNN4(x4) |
|
|
| x5 = self.Maxpool(x4) |
| x5 = self.RRCNN5(x5) |
|
|
| |
| d5 = self.Up5(x5) |
| d5 = torch.cat((x4, d5), dim=1) |
| d5 = self.Up_RRCNN5(d5) |
|
|
| d4 = self.Up4(d5) |
| d4 = torch.cat((x3, d4), dim=1) |
| d4 = self.Up_RRCNN4(d4) |
|
|
| d3 = self.Up3(d4) |
| d3 = torch.cat((x2, d3), dim=1) |
| d3 = self.Up_RRCNN3(d3) |
|
|
| d2 = self.Up2(d3) |
| d2 = torch.cat((x1, d2), dim=1) |
| d2 = self.Up_RRCNN2(d2) |
|
|
| d1 = self.Conv_1x1(d2) |
|
|
| return d1 |
|
|
|
|
| class AttU_Net(nn.Module): |
| def __init__(self, img_ch=3, output_ch=1): |
| super(AttU_Net, self).__init__() |
|
|
| self.Maxpool = nn.MaxPool2d(kernel_size=2, stride=2) |
|
|
| self.Conv1 = conv_block(ch_in=img_ch, ch_out=64) |
| self.Conv2 = conv_block(ch_in=64, ch_out=128) |
| self.Conv3 = conv_block(ch_in=128, ch_out=256) |
| self.Conv4 = conv_block(ch_in=256, ch_out=512) |
| self.Conv5 = conv_block(ch_in=512, ch_out=1024) |
|
|
| self.Up5 = up_conv(ch_in=1024, ch_out=512) |
| self.Att5 = Attention_block(F_g=512, F_l=512, F_int=256) |
| self.Up_conv5 = conv_block(ch_in=1024, ch_out=512) |
|
|
| self.Up4 = up_conv(ch_in=512, ch_out=256) |
| self.Att4 = Attention_block(F_g=256, F_l=256, F_int=128) |
| self.Up_conv4 = conv_block(ch_in=512, ch_out=256) |
|
|
| self.Up3 = up_conv(ch_in=256, ch_out=128) |
| self.Att3 = Attention_block(F_g=128, F_l=128, F_int=64) |
| self.Up_conv3 = conv_block(ch_in=256, ch_out=128) |
|
|
| self.Up2 = up_conv(ch_in=128, ch_out=64) |
| self.Att2 = Attention_block(F_g=64, F_l=64, F_int=32) |
| self.Up_conv2 = conv_block(ch_in=128, ch_out=64) |
|
|
| self.Conv_1x1 = nn.Conv2d(64, output_ch, kernel_size=1, stride=1, padding=0) |
|
|
| def forward(self, x): |
| |
| x1 = self.Conv1(x) |
|
|
| x2 = self.Maxpool(x1) |
| x2 = self.Conv2(x2) |
|
|
| x3 = self.Maxpool(x2) |
| x3 = self.Conv3(x3) |
|
|
| x4 = self.Maxpool(x3) |
| x4 = self.Conv4(x4) |
|
|
| x5 = self.Maxpool(x4) |
| x5 = self.Conv5(x5) |
|
|
| |
| d5 = self.Up5(x5) |
| x4 = self.Att5(g=d5, x=x4) |
| d5 = torch.cat((x4, d5), dim=1) |
| d5 = self.Up_conv5(d5) |
|
|
| d4 = self.Up4(d5) |
| x3 = self.Att4(g=d4, x=x3) |
| d4 = torch.cat((x3, d4), dim=1) |
| d4 = self.Up_conv4(d4) |
|
|
| d3 = self.Up3(d4) |
| x2 = self.Att3(g=d3, x=x2) |
| d3 = torch.cat((x2, d3), dim=1) |
| d3 = self.Up_conv3(d3) |
|
|
| d2 = self.Up2(d3) |
| x1 = self.Att2(g=d2, x=x1) |
| d2 = torch.cat((x1, d2), dim=1) |
| d2 = self.Up_conv2(d2) |
|
|
| d1 = self.Conv_1x1(d2) |
| return d1 |
|
|
|
|
| class R2AttU_Net(nn.Module): |
| def __init__(self, img_ch=3, output_ch=1, t=2): |
| super(R2AttU_Net, self).__init__() |
|
|
| self.Maxpool = nn.MaxPool2d(kernel_size=2, stride=2) |
| self.Upsample = nn.Upsample(scale_factor=2) |
|
|
| self.RRCNN1 = RRCNN_block(ch_in=img_ch, ch_out=64, t=t) |
|
|
| self.RRCNN2 = RRCNN_block(ch_in=64, ch_out=128, t=t) |
|
|
| self.RRCNN3 = RRCNN_block(ch_in=128, ch_out=256, t=t) |
|
|
| self.RRCNN4 = RRCNN_block(ch_in=256, ch_out=512, t=t) |
|
|
| self.RRCNN5 = RRCNN_block(ch_in=512, ch_out=1024, t=t) |
|
|
| self.Up5 = up_conv(ch_in=1024, ch_out=512) |
| self.Att5 = Attention_block(F_g=512, F_l=512, F_int=256) |
| self.Up_RRCNN5 = RRCNN_block(ch_in=1024, ch_out=512, t=t) |
|
|
| self.Up4 = up_conv(ch_in=512, ch_out=256) |
| self.Att4 = Attention_block(F_g=256, F_l=256, F_int=128) |
| self.Up_RRCNN4 = RRCNN_block(ch_in=512, ch_out=256, t=t) |
|
|
| self.Up3 = up_conv(ch_in=256, ch_out=128) |
| self.Att3 = Attention_block(F_g=128, F_l=128, F_int=64) |
| self.Up_RRCNN3 = RRCNN_block(ch_in=256, ch_out=128, t=t) |
|
|
| self.Up2 = up_conv(ch_in=128, ch_out=64) |
| self.Att2 = Attention_block(F_g=64, F_l=64, F_int=32) |
| self.Up_RRCNN2 = RRCNN_block(ch_in=128, ch_out=64, t=t) |
|
|
| self.Conv_1x1 = nn.Conv2d(64, output_ch, kernel_size=1, stride=1, padding=0) |
|
|
| def forward(self, x): |
| |
| x1 = self.RRCNN1(x) |
|
|
| x2 = self.Maxpool(x1) |
| x2 = self.RRCNN2(x2) |
|
|
| x3 = self.Maxpool(x2) |
| x3 = self.RRCNN3(x3) |
|
|
| x4 = self.Maxpool(x3) |
| x4 = self.RRCNN4(x4) |
|
|
| x5 = self.Maxpool(x4) |
| x5 = self.RRCNN5(x5) |
|
|
| |
| d5 = self.Up5(x5) |
| x4 = self.Att5(g=d5, x=x4) |
| d5 = torch.cat((x4, d5), dim=1) |
| d5 = self.Up_RRCNN5(d5) |
|
|
| d4 = self.Up4(d5) |
| x3 = self.Att4(g=d4, x=x3) |
| d4 = torch.cat((x3, d4), dim=1) |
| d4 = self.Up_RRCNN4(d4) |
|
|
| d3 = self.Up3(d4) |
| x2 = self.Att3(g=d3, x=x2) |
| d3 = torch.cat((x2, d3), dim=1) |
| d3 = self.Up_RRCNN3(d3) |
|
|
| d2 = self.Up2(d3) |
| x1 = self.Att2(g=d2, x=x1) |
| d2 = torch.cat((x1, d2), dim=1) |
| d2 = self.Up_RRCNN2(d2) |
|
|
| d1 = self.Conv_1x1(d2) |
|
|
| return d1 |