% This function downsamples an MRI struct in memory by a given factor function mri2 = downsampleMRI2d(mri,factors,mode) if nargin<3 mode='linear'; end if length(factors)==1 factors=repmat(factors,[1 2]); end if strcmp(mode,'nearest') % smooth unless we're doing labels S=mri.vol; else S=GaussFilt2d(mri.vol,0.4*factors); end [II,JJ]=ndgrid(.5+factors(1)/2:factors(1):size(S,1),.5+factors(2)/2:factors(2):size(S,2)); I=interpn(S,II,JJ,mode); mri2=[]; mri2.vol=I; mri2.volres=mri.volres.*[factors(2) factors(1) 1]; mri2.vox2ras0=mri.vox2ras0; mri2.vox2ras0(1:3,1:3)=mri.vox2ras0(1:3,1:3).*repmat([factors(2) factors(1) 1],[3 1]); mri2.vox2ras0(1:3,4)=mri2.vox2ras0(1:3,4)+mri.vox2ras0(1:3,1:3)*([factors(2); factors(1); 1]/2-0.5);