# -*- coding: utf-8 -*- """ Created on Mon Feb 6 14:21:11 2023 @author: mrinal """ import cv2 import numpy as np import os import matplotlib.pyplot as plt GT_AVAILABLE = True # set true if ground truth is available # AZH Chronic wound dataset directory dir_im = r'.\azh_wound_care_center_dataset_patches\test\images' # image directory dir_label = r'.\azh_wound_care_center_dataset_patches\test\labels' # label directory dir_pred = r'.\predictions\OldDFU' # prediction directory name = 'e7d099b05fc99c39b28a3557acc12837_0.png' # image name # Read images im = cv2.imread(os.path.join(dir_im, name))[:,:,::-1] pred_mask = cv2.imread(os.path.join(dir_pred, name), 0) contour_im = im.copy() # Find contours if GT_AVAILABLE: gt_mask = cv2.imread(os.path.join(dir_label, name), 0) contours_gt, hierarchy_gt = cv2.findContours(gt_mask, cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_NONE) print("Number of contours found in GT = " + str(len(contours_gt))) cv2.drawContours(contour_im, contours_gt, -1, (255, 0, 0), 1) # -1 signifies drawing all contours contours_pred, hierarchy_pred = cv2.findContours(pred_mask, cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_NONE) print("Number of contours found in prediction = " + str(len(contours_pred))) cv2.drawContours(contour_im, contours_pred, -1, (0, 255, 0), 1) # -1 signifies drawing all contours plt.title('Contours of the prediction') plt.xticks([]) plt.yticks([]) plt.imshow(contour_im) # Save image cv2.imwrite(os.path.join(dir_pred, 'contour_' + name), contour_im[:,:,::-1])